# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_5 - 335 ABC_tran PF00005.22 137 1.1e-09 27.5 9.6 1 1 1.6e-08 8e-08 21.4 9.6 11 135 24 280 14 281 0.64 # 4327 # 5331 # 1 # ID=1_5;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.322 1_5 - 335 SMC_N PF02463.14 220 4.1e-10 27.8 14.0 1 1 4.4e-09 2.2e-08 22.2 14.0 3 203 6 316 4 330 0.79 # 4327 # 5331 # 1 # ID=1_5;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.322 1_5 - 335 AAA_21 PF13304.1 303 1.1e-26 83.1 13.5 1 1 2.9e-27 1.4e-26 82.7 13.5 1 302 26 316 26 317 0.62 # 4327 # 5331 # 1 # ID=1_5;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.322 1_5 - 335 AAA_29 PF13555.1 62 3e-06 15.5 0.0 1 1 1.2e-06 6.2e-06 14.5 0.0 18 55 20 56 10 63 0.72 # 4327 # 5331 # 1 # ID=1_5;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.322 1_5 - 335 TIGR00611 TIGR00611 365 7.3e-06 13.6 1.8 1 2 2.4e-06 1.2e-05 12.8 0.4 21 47 22 48 3 124 0.79 # 4327 # 5331 # 1 # ID=1_5;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.322 1_5 - 335 TIGR00611 TIGR00611 365 7.3e-06 13.6 1.8 2 2 0.056 0.28 -1.5 0.0 47 73 261 287 250 313 0.76 # 4327 # 5331 # 1 # ID=1_5;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.322 1_5 - 335 DUF258 PF03193.11 161 5.7e-06 14.3 0.0 1 1 2.8e-06 1.4e-05 13.0 0.0 31 60 20 49 3 77 0.83 # 4327 # 5331 # 1 # ID=1_5;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.322 1_5 - 335 NACHT PF05729.7 166 3.3e-06 15.5 0.0 1 1 1.4e-06 6.8e-06 14.5 0.0 3 76 27 105 25 129 0.76 # 4327 # 5331 # 1 # ID=1_5;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.322 1_5 - 335 AAA_15 PF13175.1 415 2.9e-20 61.2 40.0 1 2 1.3e-06 6.4e-06 14.0 15.9 11 82 9 122 3 128 0.69 # 4327 # 5331 # 1 # ID=1_5;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.322 1_5 - 335 AAA_15 PF13175.1 415 2.9e-20 61.2 40.0 2 2 3.7e-16 1.9e-15 45.4 29.6 248 415 87 315 73 315 0.64 # 4327 # 5331 # 1 # ID=1_5;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.322 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/4916e10a-b773-44cc-bf7e-99eca32a64aa # Target file: checkm_output/bins/pm754/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm754/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/4916e10a-b773-44cc-bf7e-99eca32a64aa checkm_output/bins/pm754/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:13:47 2017 # [ok]