# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_1 - 36 HTH_3 PF01381.17 55 1.1e-06 17.1 0.0 1 1 2.9e-07 1.4e-06 16.8 0.0 1 25 12 36 12 36 0.97 # 1 # 108 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=11-12bp;gc_cont=0.269 1_1 - 36 HTH_31 PF13560.1 64 2.2e-05 13.4 0.0 1 1 4.7e-06 2.4e-05 13.3 0.0 6 30 12 36 9 36 0.92 # 1 # 108 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=11-12bp;gc_cont=0.269 1_4 - 420 DNA_methylase PF00145.12 335 2.6e-37 117.2 0.1 1 1 6.2e-38 3.1e-37 117.0 0.1 4 334 4 400 1 401 0.78 # 3931 # 5190 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.328 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/03333d0f-00aa-4d82-b697-079539306d42 # Target file: checkm_output/bins/pm748/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm748/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/03333d0f-00aa-4d82-b697-079539306d42 checkm_output/bins/pm748/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:13:39 2017 # [ok]