# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 4_14 - 259 Cons_hypoth95 PF03602.10 183 8.9e-06 18.5 0.0 1 2 0.00018 0.025 7.3 0.0 113 169 44 102 31 110 0.71 # 7764 # 8540 # -1 # ID=4_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.611 4_14 - 259 Cons_hypoth95 PF03602.10 183 8.9e-06 18.5 0.0 2 2 4.6e-05 0.0064 9.2 0.0 23 60 177 213 168 250 0.72 # 7764 # 8540 # -1 # ID=4_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.611 3_8 - 248 HTH_IclR PF09339.5 52 0.00012 15.1 0.0 1 1 1.8e-06 0.00024 14.0 0.0 17 39 218 240 212 242 0.92 # 3675 # 4418 # 1 # ID=3_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.519 3_8 - 248 HTH_22 PF13309.1 64 0.00011 15.3 0.2 1 2 0.055 7.6 -0.2 0.0 27 38 137 148 122 150 0.83 # 3675 # 4418 # 1 # ID=3_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.519 3_8 - 248 HTH_22 PF13309.1 64 0.00011 15.3 0.2 2 2 1.1e-05 0.0015 11.7 0.0 45 64 222 241 217 241 0.86 # 3675 # 4418 # 1 # ID=3_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.519 8_9 - 278 N6_Mtase PF02384.11 311 5.2e-12 38.8 0.0 1 1 1.3e-13 9.2e-12 37.9 0.0 25 117 139 237 133 248 0.84 # 3238 # 4071 # 1 # ID=8_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 4_5 - 188 N6_Mtase PF02384.11 311 0.0011 11.4 0.0 1 2 0.00011 0.0074 8.7 0.0 28 71 32 75 22 89 0.83 # 823 # 1386 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 4_5 - 188 N6_Mtase PF02384.11 311 0.0011 11.4 0.0 2 2 0.057 3.9 -0.3 0.0 123 137 110 124 102 132 0.81 # 823 # 1386 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 10_2 - 279 rve_3 PF13683.1 67 9.9e-19 60.1 0.0 1 1 6.7e-20 1.8e-18 59.2 0.0 4 67 204 267 201 267 0.95 # 463 # 1299 # 1 # ID=10_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.558 2_20 - 511 rve_3 PF13683.1 67 4.9e-11 35.4 0.0 1 1 9.4e-12 2.6e-10 33.1 0.0 6 67 436 499 431 499 0.94 # 12600 # 14132 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 2_23 - 403 rve_3 PF13683.1 67 3.3e-09 29.6 0.1 1 1 4.5e-10 1.2e-08 27.7 0.1 5 56 236 290 232 294 0.90 # 16522 # 17730 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 2_21 - 468 rve_3 PF13683.1 67 0.00019 14.3 0.0 1 1 1.6e-05 0.00046 13.1 0.0 16 56 252 295 237 295 0.88 # 14244 # 15647 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.519 3_9 - 554 rve_3 PF13683.1 67 0.00085 12.3 1.4 1 1 8.8e-05 0.0024 10.8 1.4 12 57 282 330 278 334 0.83 # 4402 # 6063 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.546 1_22 - 711 FtsK_SpoIIIE PF01580.13 205 0.0014 11.4 0.0 1 1 1.9e-05 0.0027 10.5 0.0 35 62 190 217 185 227 0.87 # 19639 # 21771 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.433 4_9 - 200 HTH_40 PF14493.1 91 3.5e-05 17.4 0.4 1 1 5.1e-07 7e-05 16.4 0.4 7 41 142 176 136 191 0.89 # 4630 # 5229 # 1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.352 1_26 - 202 HTH_38 PF13936.1 44 6.8e-08 25.4 1.0 1 1 3.5e-09 2.4e-07 23.6 0.0 15 44 168 197 160 197 0.93 # 30964 # 31569 # 1 # ID=1_26;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 3_8 - 248 HTH_38 PF13936.1 44 0.00018 14.4 0.1 1 1 1.2e-05 0.00082 12.3 0.0 15 43 213 242 208 243 0.88 # 3675 # 4418 # 1 # ID=3_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.519 3_12 - 258 TIGR01830 TIGR01830 239 1.9e-48 158.3 1.2 1 1 1.6e-50 2.2e-48 158.1 1.2 2 239 11 253 10 253 0.91 # 8483 # 9256 # -1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.540 4_15 - 680 UvrD-helicase PF00580.16 315 4.1e-39 128.0 0.2 1 1 3.5e-40 4.8e-38 124.5 0.2 2 307 6 260 5 266 0.90 # 9634 # 11673 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.505 1_8 - 444 TBPIP PF07106.8 169 0.00026 13.9 0.9 1 1 3.7e-06 0.00051 13.0 0.9 76 133 69 125 56 134 0.80 # 4024 # 5355 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.468 12_2 - 256 PB1 PF00564.19 84 0.00015 14.8 0.1 1 2 0.0063 0.87 2.7 0.0 11 40 8 40 2 49 0.79 # 158 # 925 # 1 # ID=12_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.398 12_2 - 256 PB1 PF00564.19 84 0.00015 14.8 0.1 2 2 5.5e-05 0.0076 9.3 0.0 32 57 179 202 168 203 0.82 # 158 # 925 # 1 # ID=12_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.398 7_6 - 87 HTH_8 PF02954.14 42 0.00016 14.6 0.4 1 2 4.8e-06 0.00066 12.6 0.1 1 16 47 62 47 63 0.92 # 3127 # 3387 # -1 # ID=7_6;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.533 7_6 - 87 HTH_8 PF02954.14 42 0.00016 14.6 0.4 2 2 0.091 13 -1.1 0.0 11 24 69 82 65 82 0.71 # 3127 # 3387 # -1 # ID=7_6;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.533 5_6 - 573 tRNA-synt_His PF13393.1 311 0.00075 11.9 0.7 1 2 0.036 5 -0.6 0.1 193 257 208 269 191 279 0.55 # 2340 # 4058 # -1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.372 5_6 - 573 tRNA-synt_His PF13393.1 311 0.00075 11.9 0.7 2 2 2.5e-05 0.0035 9.7 0.0 47 84 459 500 446 509 0.77 # 2340 # 4058 # -1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.372 1_32 - 94 HTH_39 PF14090.1 70 0.00036 13.4 0.0 1 1 4.1e-06 0.00057 12.7 0.0 5 36 7 38 5 52 0.89 # 35156 # 35437 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.582 3_17 - 194 TetR_N PF00440.18 47 5.2e-13 41.9 0.0 1 1 2e-14 9.2e-13 41.1 0.0 1 46 9 54 9 55 0.94 # 12111 # 12692 # -1 # ID=3_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.474 3_5 - 207 TetR_N PF00440.18 47 1.9e-12 40.0 0.1 1 1 8.3e-14 3.8e-12 39.1 0.1 3 46 20 63 18 64 0.94 # 1923 # 2543 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.506 7_7 - 186 TetR_N PF00440.18 47 3.8e-12 39.1 0.1 1 1 1.4e-13 6.3e-12 38.4 0.1 2 46 8 52 7 53 0.93 # 3600 # 4157 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.548 4_15 - 680 AAA_19 PF13245.1 76 5.8e-11 35.4 0.1 1 1 1.8e-12 1.2e-10 34.4 0.1 14 75 21 86 11 87 0.87 # 9634 # 11673 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.505 1_23 - 1724 AAA_19 PF13245.1 76 2.1e-07 24.1 1.0 1 1 3e-09 2.1e-07 24.1 1.0 7 76 1011 1074 1005 1074 0.82 # 21773 # 26944 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.498 2_5 - 211 CbiA PF01656.18 195 9.7e-16 51.1 0.2 1 1 1.9e-17 2.6e-15 49.7 0.2 3 181 7 167 5 180 0.74 # 2795 # 3427 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.491 1_26 - 202 Sigma70_r4_2 PF08281.7 54 1.8e-06 20.8 0.0 1 1 8.1e-08 5.6e-06 19.2 0.0 17 44 165 191 165 199 0.86 # 30964 # 31569 # 1 # ID=1_26;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 4_9 - 200 Sigma70_r4_2 PF08281.7 54 4.4e-05 16.3 0.1 1 1 1.3e-06 8.8e-05 15.3 0.1 16 49 139 171 134 175 0.85 # 4630 # 5229 # 1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.352 2_6 - 252 Rep_3 PF01051.16 222 8e-50 162.8 0.0 1 1 6.6e-52 9.1e-50 162.6 0.0 3 222 16 242 14 242 0.91 # 4420 # 5175 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 10_2 - 279 rve PF00665.21 120 2.4e-23 75.9 0.0 1 1 1.7e-24 4e-23 75.2 0.0 7 119 113 229 107 230 0.95 # 463 # 1299 # 1 # ID=10_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.558 2_20 - 511 rve PF00665.21 120 3.2e-21 69.0 0.0 1 2 0.067 1.5 2.3 0.0 55 97 92 139 79 142 0.83 # 12600 # 14132 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 2_20 - 511 rve PF00665.21 120 3.2e-21 69.0 0.0 2 2 1.4e-20 3.2e-19 62.6 0.0 4 119 346 459 343 460 0.96 # 12600 # 14132 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 14_1 - 235 rve PF00665.21 120 4.5e-13 42.7 0.1 1 2 0.089 2 1.9 0.0 78 102 27 49 6 54 0.84 # 53 # 757 # -1 # ID=14_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 14_1 - 235 rve PF00665.21 120 4.5e-13 42.7 0.1 2 2 3.6e-13 8.4e-12 38.7 0.0 9 119 75 182 70 183 0.89 # 53 # 757 # -1 # ID=14_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 2_23 - 403 rve PF00665.21 120 6.5e-12 39.0 0.1 1 1 3.7e-12 8.4e-11 35.4 0.0 4 119 138 260 135 261 0.81 # 16522 # 17730 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 3_9 - 554 rve PF00665.21 120 2.3e-11 37.2 0.0 1 1 4.1e-12 9.5e-11 35.3 0.0 3 118 158 298 156 300 0.82 # 4402 # 6063 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.546 2_21 - 468 rve PF00665.21 120 1.2e-09 31.7 0.0 1 1 9e-11 2.1e-09 30.9 0.0 3 119 141 265 139 266 0.82 # 14244 # 15647 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.519 4_9 - 200 Terminase_5 PF06056.7 58 0.00045 13.2 0.0 1 1 5.6e-06 0.00077 12.4 0.0 8 31 143 166 139 170 0.93 # 4630 # 5229 # 1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.352 4_5 - 188 Methyltransf_26 PF13659.1 117 1.8e-12 40.7 0.1 1 1 6.4e-14 2.9e-12 40.0 0.1 2 111 52 144 51 149 0.91 # 823 # 1386 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 4_14 - 259 Methyltransf_26 PF13659.1 117 3e-11 36.8 0.3 1 2 5.9e-07 2.7e-05 17.6 0.0 54 113 29 95 4 110 0.74 # 7764 # 8540 # -1 # ID=4_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.611 4_14 - 259 Methyltransf_26 PF13659.1 117 3e-11 36.8 0.3 2 2 7e-07 3.2e-05 17.3 0.1 4 44 199 238 196 253 0.80 # 7764 # 8540 # -1 # ID=4_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.611 8_9 - 278 Methyltransf_26 PF13659.1 117 9.4e-05 15.8 0.1 1 1 4.7e-06 0.00021 14.7 0.1 3 68 171 241 170 262 0.82 # 3238 # 4071 # 1 # ID=8_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_23 - 1724 AAA_30 PF13604.1 196 1e-44 145.8 11.3 1 2 0.00015 0.01 8.7 1.3 32 127 482 567 455 642 0.75 # 21773 # 26944 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.498 1_23 - 1724 AAA_30 PF13604.1 196 1e-44 145.8 11.3 2 2 4.9e-45 3.4e-43 140.8 2.9 2 184 999 1181 998 1186 0.96 # 21773 # 26944 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.498 4_15 - 680 AAA_30 PF13604.1 196 0.00042 13.3 0.0 1 2 0.00018 0.012 8.5 0.0 7 42 10 42 4 80 0.71 # 9634 # 11673 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.505 4_15 - 680 AAA_30 PF13604.1 196 0.00042 13.3 0.0 2 2 0.014 0.94 2.3 0.0 97 133 213 248 196 300 0.84 # 9634 # 11673 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.505 10_1 - 132 CPSase_L_D3 PF02787.14 123 7.6e-05 15.9 0.1 1 2 5.7e-05 0.0079 9.3 0.0 7 45 23 61 17 78 0.86 # 65 # 460 # 1 # ID=10_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.538 10_1 - 132 CPSase_L_D3 PF02787.14 123 7.6e-05 15.9 0.1 2 2 0.0014 0.2 4.8 0.0 42 81 86 123 81 129 0.84 # 65 # 460 # 1 # ID=10_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.538 10_1 - 132 HTH_Tnp_1 PF01527.15 76 3.8e-19 61.9 1.2 1 1 1.5e-20 5.3e-19 61.4 0.3 4 74 20 97 17 99 0.90 # 65 # 460 # 1 # ID=10_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.538 2_24 - 135 HTH_Tnp_1 PF01527.15 76 1.3e-18 60.2 0.0 1 1 4.8e-20 1.7e-18 59.8 0.0 2 58 9 70 8 101 0.85 # 17759 # 18163 # 1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.489 2_20 - 511 HTH_Tnp_1 PF01527.15 76 3e-18 59.0 2.7 1 3 4.1e-06 0.00014 15.2 0.0 9 55 4 50 2 57 0.85 # 12600 # 14132 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 2_20 - 511 HTH_Tnp_1 PF01527.15 76 3e-18 59.0 2.7 2 3 4.1e-06 0.00014 15.2 0.0 3 47 55 100 53 108 0.91 # 12600 # 14132 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 2_20 - 511 HTH_Tnp_1 PF01527.15 76 3e-18 59.0 2.7 3 3 6e-10 2.1e-08 27.4 0.3 6 73 116 191 111 194 0.81 # 12600 # 14132 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 14_1 - 235 HTH_Tnp_1 PF01527.15 76 0.00034 13.9 0.3 1 1 2.2e-05 0.00074 12.9 0.3 4 51 6 58 4 63 0.79 # 53 # 757 # -1 # ID=14_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 4_9 - 200 GerE PF00196.14 58 8e-12 37.7 0.9 1 1 2e-13 1.4e-11 37.0 0.9 4 55 134 185 131 187 0.93 # 4630 # 5229 # 1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.352 1_26 - 202 GerE PF00196.14 58 4.1e-05 16.3 0.0 1 1 1e-06 7.1e-05 15.5 0.0 11 35 166 190 165 201 0.88 # 30964 # 31569 # 1 # ID=1_26;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_22 - 711 TraG-D_C PF12696.2 128 2.4e-19 62.9 0.0 1 1 5.9e-21 8.1e-19 61.1 0.0 1 127 428 550 428 551 0.84 # 19639 # 21771 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.433 14_1 - 235 DDE_3 PF13358.1 146 0.00095 12.3 0.0 1 1 2.1e-05 0.0029 10.7 0.0 32 90 82 141 59 146 0.87 # 53 # 757 # -1 # ID=14_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 2_5 - 211 MipZ PF09140.6 261 7.8e-09 28.3 0.1 1 2 5.5e-08 7.5e-06 18.5 0.1 5 135 7 116 3 151 0.75 # 2795 # 3427 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.491 2_5 - 211 MipZ PF09140.6 261 7.8e-09 28.3 0.1 2 2 0.076 10 -1.6 0.0 212 237 168 193 141 202 0.77 # 2795 # 3427 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.491 4_14 - 259 UPF0020 PF01170.13 180 2.6e-06 20.4 0.0 1 2 4.7e-05 0.0033 10.4 0.0 84 120 24 59 12 104 0.77 # 7764 # 8540 # -1 # ID=4_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.611 4_14 - 259 UPF0020 PF01170.13 180 2.6e-06 20.4 0.0 2 2 0.00022 0.015 8.2 0.0 28 51 195 218 190 252 0.75 # 7764 # 8540 # -1 # ID=4_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.611 4_5 - 188 UPF0020 PF01170.13 180 3.6e-05 16.7 0.0 1 1 2.1e-06 0.00015 14.7 0.0 19 43 41 65 39 137 0.80 # 823 # 1386 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 3_12 - 258 Ribosomal_L12 PF00542.14 68 5.9e-05 16.4 0.3 1 1 8.1e-07 0.00011 15.5 0.3 23 62 16 55 6 61 0.90 # 8483 # 9256 # -1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.540 5_9 - 256 DDE_Tnp_1 PF01609.16 213 2.8e-22 72.6 0.7 1 1 2.7e-24 3.7e-22 72.2 0.7 4 201 63 230 60 241 0.84 # 5605 # 6372 # -1 # ID=5_9;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.542 1_23 - 1724 AAA PF00004.24 132 0.00015 15.4 0.2 1 3 0.04 2.8 1.5 0.0 64 98 114 150 113 168 0.69 # 21773 # 26944 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.498 1_23 - 1724 AAA PF00004.24 132 0.00015 15.4 0.2 2 3 0.046 3.2 1.3 0.0 81 114 476 509 459 513 0.87 # 21773 # 26944 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.498 1_23 - 1724 AAA PF00004.24 132 0.00015 15.4 0.2 3 3 0.00075 0.052 7.1 0.0 3 41 1020 1059 1018 1108 0.76 # 21773 # 26944 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.498 3_10 - 323 AAA PF00004.24 132 0.00052 13.6 0.0 1 1 1.7e-05 0.0012 12.5 0.0 3 74 45 140 43 178 0.71 # 6053 # 7021 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.539 4_15 - 680 Herpes_ori_bp PF02399.10 824 0.00049 11.4 0.0 1 1 7.3e-06 0.001 10.4 0.0 52 109 20 83 9 102 0.80 # 9634 # 11673 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.505 4_14 - 259 N6_N4_Mtase PF01555.13 231 2.1e-32 105.8 0.0 1 2 8.5e-13 1.2e-10 34.6 0.0 1 113 46 155 46 163 0.85 # 7764 # 8540 # -1 # ID=4_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.611 4_14 - 259 N6_N4_Mtase PF01555.13 231 2.1e-32 105.8 0.0 2 2 2.1e-23 2.9e-21 69.4 0.0 169 227 173 231 160 235 0.93 # 7764 # 8540 # -1 # ID=4_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.611 2_20 - 511 rve_2 PF13333.1 52 1.1e-15 50.9 0.6 1 1 2.6e-17 3.6e-15 49.2 0.1 1 50 450 505 450 506 0.91 # 12600 # 14132 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 2_20 - 511 P22_Cro PF14549.1 60 0.0012 11.9 0.0 1 1 2.1e-05 0.0029 10.7 0.0 10 40 134 164 129 167 0.88 # 12600 # 14132 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 2_3 - 325 Hydantoinase_A PF01968.13 290 5.5e-06 19.0 2.3 1 2 1.5e-06 0.0002 13.8 0.6 75 118 164 204 149 212 0.75 # 1207 # 2181 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.478 2_3 - 325 Hydantoinase_A PF01968.13 290 5.5e-06 19.0 2.3 2 2 0.0011 0.15 4.5 0.0 211 262 243 296 214 310 0.70 # 1207 # 2181 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.478 3_10 - 323 AAA_16 PF13191.1 185 1.6e-07 24.8 0.9 1 1 8.4e-08 5.8e-06 19.8 0.2 18 179 34 153 22 162 0.74 # 6053 # 7021 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.539 1_22 - 711 AAA_16 PF13191.1 185 6.7e-06 19.5 0.0 1 1 6.7e-07 4.6e-05 16.8 0.0 14 55 183 225 182 246 0.86 # 19639 # 21771 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.433 2_12 - 190 NodS PF05401.6 201 0.001 11.8 0.0 1 2 0.054 7.5 -0.8 0.0 42 154 33 58 19 66 0.62 # 9213 # 9782 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.675 2_12 - 190 NodS PF05401.6 201 0.001 11.8 0.0 2 2 2.7e-05 0.0037 10.0 0.0 26 70 99 143 85 171 0.83 # 9213 # 9782 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.675 3_10 - 323 AAA_22 PF13401.1 131 4.5e-12 39.6 0.2 1 1 2.5e-13 1.1e-11 38.3 0.2 3 129 39 170 35 172 0.81 # 6053 # 7021 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.539 4_15 - 680 AAA_22 PF13401.1 131 1.7e-05 18.4 0.2 1 2 0.00019 0.0088 9.6 0.0 4 65 17 75 13 106 0.77 # 9634 # 11673 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.505 4_15 - 680 AAA_22 PF13401.1 131 1.7e-05 18.4 0.2 2 2 0.002 0.093 6.2 0.0 41 108 152 232 112 246 0.62 # 9634 # 11673 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.505 1_23 - 1724 AAA_22 PF13401.1 131 0.00048 13.6 1.9 1 1 0.00015 0.0069 9.9 0.0 4 112 1015 1114 1011 1141 0.62 # 21773 # 26944 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.498 4_15 - 680 TIGR01074 TIGR01074 668 1.6e-51 168.3 0.0 1 2 1.3e-38 1.7e-36 118.7 0.0 2 304 5 308 4 404 0.84 # 9634 # 11673 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.505 4_15 - 680 TIGR01074 TIGR01074 668 1.6e-51 168.3 0.0 2 2 4.5e-17 6.2e-15 47.4 0.0 533 610 517 607 502 613 0.80 # 9634 # 11673 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.505 1_22 - 711 AAA_29 PF13555.1 62 0.00085 12.2 0.0 1 1 1.4e-05 0.002 11.1 0.0 22 40 192 210 182 221 0.82 # 19639 # 21771 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.433 2_21 - 468 LZ_Tnp_IS481 PF13011.1 85 1.8e-06 21.6 0.1 1 1 7.7e-08 5.3e-06 20.1 0.1 13 61 15 63 4 78 0.89 # 14244 # 15647 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.519 2_20 - 511 LZ_Tnp_IS481 PF13011.1 85 0.0026 11.5 0.1 1 1 3.7e-05 0.0026 11.5 0.1 16 64 124 173 118 190 0.80 # 12600 # 14132 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 3_12 - 258 adh_short_C2 PF13561.1 241 2.8e-36 118.8 1.0 1 1 2.3e-38 3.2e-36 118.6 1.0 5 240 16 252 13 253 0.91 # 8483 # 9256 # -1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.540 3_8 - 248 HTH_Tnp_IS630 PF01710.11 120 0.00011 15.3 0.0 1 2 0.052 7.2 -0.3 0.0 86 103 137 154 110 165 0.77 # 3675 # 4418 # 1 # ID=3_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.519 3_8 - 248 HTH_Tnp_IS630 PF01710.11 120 0.00011 15.3 0.0 2 2 4.4e-06 0.00061 12.9 0.0 14 43 215 244 211 247 0.92 # 3675 # 4418 # 1 # ID=3_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.519 3_12 - 258 adh_short PF00106.20 167 1.9e-24 79.8 2.1 1 1 2e-26 2.7e-24 79.3 2.1 3 166 10 175 8 176 0.89 # 8483 # 9256 # -1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.540 2_23 - 403 HTH_32 PF13565.1 77 1.3e-11 38.6 0.8 1 1 1.5e-12 5.2e-11 36.6 0.2 2 77 40 113 39 113 0.80 # 16522 # 17730 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 2_21 - 468 HTH_32 PF13565.1 77 3.1e-07 24.5 0.1 1 1 9.1e-09 3.1e-07 24.5 0.1 3 77 45 117 43 117 0.74 # 14244 # 15647 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.519 14_1 - 235 HTH_32 PF13565.1 77 1.8e-06 22.1 0.2 1 1 2.3e-07 7.8e-06 20.0 0.0 26 76 5 50 2 51 0.83 # 53 # 757 # -1 # ID=14_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 3_9 - 554 HTH_32 PF13565.1 77 8.8e-05 16.7 0.6 1 2 0.012 0.4 5.0 0.1 30 77 9 52 2 52 0.71 # 4402 # 6063 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.546 3_9 - 554 HTH_32 PF13565.1 77 8.8e-05 16.7 0.6 2 2 2.5e-06 8.8e-05 16.7 0.6 1 65 47 114 47 136 0.74 # 4402 # 6063 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.546 4_15 - 680 TIGR00609 TIGR00609 1175 5e-17 54.2 0.0 1 3 0.0017 0.24 2.3 0.1 10 55 18 61 12 83 0.86 # 9634 # 11673 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.505 4_15 - 680 TIGR00609 TIGR00609 1175 5e-17 54.2 0.0 2 3 2.1e-11 2.9e-09 28.5 0.0 331 419 179 255 96 258 0.77 # 9634 # 11673 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.505 4_15 - 680 TIGR00609 TIGR00609 1175 5e-17 54.2 0.0 3 3 1.3e-08 1.8e-06 19.3 0.0 731 813 539 609 529 627 0.81 # 9634 # 11673 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.505 8_5 - 139 HTH_3 PF01381.17 55 5.2e-11 35.7 0.1 1 1 1.3e-12 1.8e-10 33.9 0.0 2 52 84 133 83 136 0.93 # 1016 # 1432 # 1 # ID=8_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.511 3_12 - 258 Epimerase PF01370.16 236 9.8e-05 15.2 0.2 1 1 2.5e-06 0.00034 13.4 0.2 2 227 11 238 10 248 0.69 # 8483 # 9256 # -1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.540 2_21 - 468 HTH_23 PF13384.1 50 1.7e-11 36.9 0.9 1 1 4.2e-12 5.7e-11 35.2 0.9 2 48 11 58 10 60 0.94 # 14244 # 15647 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.519 1_26 - 202 HTH_23 PF13384.1 50 1.7e-07 24.2 0.2 1 1 1.2e-08 1.7e-07 24.2 0.2 10 42 166 198 160 201 0.92 # 30964 # 31569 # 1 # ID=1_26;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 10_1 - 132 HTH_23 PF13384.1 50 2.1e-07 23.9 0.0 1 1 3.9e-08 5.3e-07 22.6 0.0 2 48 23 70 22 72 0.91 # 65 # 460 # 1 # ID=10_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.538 2_23 - 403 HTH_23 PF13384.1 50 5.3e-07 22.6 2.0 1 1 1.2e-07 1.6e-06 21.0 0.3 3 48 8 54 6 56 0.87 # 16522 # 17730 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 14_1 - 235 HTH_23 PF13384.1 50 8.4e-06 18.8 0.7 1 1 1.9e-05 0.00026 14.0 0.1 28 42 41 55 40 62 0.87 # 53 # 757 # -1 # ID=14_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 2_20 - 511 HTH_23 PF13384.1 50 9e-06 18.7 8.7 1 2 0.0035 0.048 6.8 0.1 2 45 2 47 1 51 0.88 # 12600 # 14132 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 2_20 - 511 HTH_23 PF13384.1 50 9e-06 18.7 8.7 2 2 9.8e-06 0.00013 14.9 0.0 5 40 120 156 118 164 0.91 # 12600 # 14132 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 3_8 - 248 HTH_23 PF13384.1 50 0.00014 14.9 0.0 1 1 2.7e-05 0.00038 13.5 0.0 16 40 217 242 210 246 0.84 # 3675 # 4418 # 1 # ID=3_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.519 6_3 - 670 HTH_23 PF13384.1 50 0.00022 14.3 0.6 1 1 0.00015 0.0021 11.1 0.0 13 40 150 177 142 183 0.88 # 1030 # 3039 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.539 2_24 - 135 HTH_23 PF13384.1 50 0.00022 14.2 0.0 1 1 2.9e-05 0.0004 13.4 0.0 7 44 19 57 14 62 0.86 # 17759 # 18163 # 1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.489 3_16 - 113 HTH_23 PF13384.1 50 0.0011 12.0 0.0 1 1 0.00015 0.002 11.2 0.0 13 30 71 88 63 90 0.80 # 11768 # 12106 # -1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.578 1_1 - 291 BetR PF08667.5 147 5.5e-25 81.4 0.1 1 1 7.4e-27 1e-24 80.5 0.1 4 142 11 139 9 142 0.89 # 195 # 1067 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.371 3_8 - 248 HTH_7 PF02796.10 45 6.5e-09 29.0 0.4 1 1 2.1e-10 1.4e-08 27.9 0.2 1 42 201 240 201 243 0.92 # 3675 # 4418 # 1 # ID=3_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.519 1_26 - 202 HTH_7 PF02796.10 45 2.1e-05 17.7 0.0 1 1 8.7e-07 6e-05 16.3 0.0 13 38 165 190 156 190 0.93 # 30964 # 31569 # 1 # ID=1_26;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 8_5 - 139 HTH_19 PF12844.2 64 1.3e-11 37.8 0.0 1 1 3e-13 4.1e-11 36.2 0.0 4 58 83 136 80 138 0.93 # 1016 # 1432 # 1 # ID=8_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.511 3_12 - 258 NAD_binding_10 PF13460.1 183 5.1e-05 16.7 1.6 1 1 3.9e-06 0.00055 13.3 1.6 2 178 11 231 10 236 0.51 # 8483 # 9256 # -1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.540 2_21 - 468 HTH_29 PF13551.1 112 1.1e-15 51.1 1.2 1 1 1.4e-16 2.9e-15 49.8 1.2 1 112 16 121 16 121 0.89 # 14244 # 15647 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.519 2_23 - 403 HTH_29 PF13551.1 112 1.5e-15 50.7 2.9 1 1 1e-16 2e-15 50.3 0.4 15 111 26 116 12 117 0.85 # 16522 # 17730 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 10_1 - 132 HTH_29 PF13551.1 112 4.8e-06 20.1 0.0 1 1 3.4e-07 6.7e-06 19.6 0.0 8 67 36 94 28 121 0.75 # 65 # 460 # 1 # ID=10_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.538 2_20 - 511 HTH_29 PF13551.1 112 2.2e-05 18.0 3.0 1 2 0.01 0.2 5.2 0.0 2 67 8 68 7 102 0.63 # 12600 # 14132 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 2_20 - 511 HTH_29 PF13551.1 112 2.2e-05 18.0 3.0 2 2 8.6e-05 0.0017 11.9 0.5 1 96 122 214 122 218 0.63 # 12600 # 14132 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 3_9 - 554 HTH_29 PF13551.1 112 2.3e-05 17.9 0.9 1 1 5.3e-06 0.0001 15.8 0.1 14 97 33 113 25 121 0.70 # 4402 # 6063 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.546 1_26 - 202 HTH_29 PF13551.1 112 5.8e-05 16.6 0.5 1 2 0.05 0.98 3.0 0.0 51 88 43 87 25 101 0.62 # 30964 # 31569 # 1 # ID=1_26;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_26 - 202 HTH_29 PF13551.1 112 5.8e-05 16.6 0.5 2 2 0.00013 0.0026 11.3 0.2 4 36 166 197 165 200 0.89 # 30964 # 31569 # 1 # ID=1_26;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 3_8 - 248 HTH_29 PF13551.1 112 0.00063 13.3 1.5 1 1 0.00012 0.0024 11.4 0.1 6 35 214 242 210 245 0.91 # 3675 # 4418 # 1 # ID=3_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.519 14_1 - 235 DDE_Tnp_IS66 PF03050.9 271 3.2e-12 39.5 0.3 1 1 3e-14 4.1e-12 39.2 0.3 5 132 10 144 6 174 0.87 # 53 # 757 # -1 # ID=14_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 3_11 - 359 TIGR00508 TIGR00508 419 0.00092 10.9 0.0 1 1 1.2e-05 0.0017 10.0 0.0 213 246 143 176 140 199 0.88 # 7221 # 8297 # 1 # ID=3_11;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.501 3_10 - 323 AAA_5 PF07728.9 139 0.00081 12.5 0.1 1 1 2.3e-05 0.0032 10.6 0.2 5 90 46 149 43 154 0.90 # 6053 # 7021 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.539 1_22 - 711 TrwB_AAD_bind PF10412.4 386 8.2e-138 452.5 0.0 1 1 7.4e-140 1e-137 452.2 0.0 2 386 180 570 179 570 0.99 # 19639 # 21771 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.433 2_5 - 211 TIGR01968 TIGR01968 261 2.6e-06 19.9 0.4 1 2 3.4e-06 0.00047 12.6 0.1 3 40 4 41 2 43 0.91 # 2795 # 3427 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.491 2_5 - 211 TIGR01968 TIGR01968 261 2.6e-06 19.9 0.4 2 2 0.00042 0.058 5.7 0.0 110 154 78 122 64 153 0.72 # 2795 # 3427 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.491 4_14 - 259 Methyltransf_15 PF09445.5 164 0.00067 12.6 0.0 1 2 0.011 1.6 1.6 0.0 50 80 26 55 19 64 0.86 # 7764 # 8540 # -1 # ID=4_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.611 4_14 - 259 Methyltransf_15 PF09445.5 164 0.00067 12.6 0.0 2 2 8.1e-05 0.011 8.6 0.0 3 30 198 225 196 238 0.90 # 7764 # 8540 # -1 # ID=4_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.611 1_11 - 874 DUF87 PF01935.12 229 6.6e-07 22.7 0.0 1 1 1.7e-08 2.4e-06 20.9 0.0 30 184 490 636 489 666 0.75 # 6314 # 8935 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.406 2_21 - 468 HTH_28 PF13518.1 52 3.6e-12 39.5 2.6 1 1 3.5e-13 6e-12 38.8 1.6 2 48 16 63 15 70 0.93 # 14244 # 15647 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.519 2_20 - 511 HTH_28 PF13518.1 52 4.5e-09 29.6 6.3 1 2 4.6e-05 0.0008 12.8 0.5 2 47 7 56 6 61 0.80 # 12600 # 14132 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 2_20 - 511 HTH_28 PF13518.1 52 4.5e-09 29.6 6.3 2 2 5.3e-06 9.1e-05 15.8 0.2 4 47 124 169 121 174 0.75 # 12600 # 14132 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 2_23 - 403 HTH_28 PF13518.1 52 8.9e-09 28.7 4.1 1 2 8.5e-09 1.5e-07 24.8 0.4 2 51 12 63 11 64 0.88 # 16522 # 17730 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 2_23 - 403 HTH_28 PF13518.1 52 8.9e-09 28.7 4.1 2 2 0.015 0.27 4.8 0.2 17 45 95 119 90 128 0.75 # 16522 # 17730 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 1_26 - 202 HTH_28 PF13518.1 52 3.5e-08 26.7 0.4 1 1 4.9e-09 8.4e-08 25.5 0.4 4 38 165 199 165 201 0.92 # 30964 # 31569 # 1 # ID=1_26;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 10_1 - 132 HTH_28 PF13518.1 52 3.8e-08 26.6 0.1 1 1 9e-09 1.5e-07 24.7 0.0 1 43 27 70 27 73 0.92 # 65 # 460 # 1 # ID=10_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.538 2_24 - 135 HTH_28 PF13518.1 52 8.1e-06 19.2 0.0 1 1 1e-06 1.7e-05 18.1 0.0 1 39 18 57 18 63 0.86 # 17759 # 18163 # 1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.489 3_8 - 248 HTH_28 PF13518.1 52 7.2e-05 16.1 0.1 1 1 1e-05 0.00018 14.9 0.1 8 35 215 242 213 242 0.87 # 3675 # 4418 # 1 # ID=3_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.519 14_1 - 235 HTH_28 PF13518.1 52 8e-05 16.0 1.2 1 1 2e-05 0.00035 14.0 1.2 22 36 40 54 13 55 0.76 # 53 # 757 # -1 # ID=14_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 3_10 - 323 TIGR00041 TIGR00041 196 0.00077 12.2 0.0 1 1 9.3e-06 0.0013 11.5 0.0 2 54 38 95 37 119 0.78 # 6053 # 7021 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.539 2_20 - 511 HTH_Tnp_1_2 PF13022.1 142 0.00013 15.1 0.4 1 2 6.6e-05 0.0091 9.2 0.0 32 64 131 163 123 197 0.83 # 12600 # 14132 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 2_20 - 511 HTH_Tnp_1_2 PF13022.1 142 0.00013 15.1 0.4 2 2 0.0037 0.51 3.5 0.1 33 91 234 295 206 318 0.76 # 12600 # 14132 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 1_26 - 202 HTH_24 PF13412.1 48 3.3e-05 16.6 0.0 1 1 1e-06 7.2e-05 15.6 0.0 16 40 172 196 168 196 0.89 # 30964 # 31569 # 1 # ID=1_26;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 2_21 - 468 HTH_24 PF13412.1 48 0.00037 13.3 0.2 1 1 3.3e-05 0.0023 10.7 0.1 15 43 25 53 17 55 0.82 # 14244 # 15647 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.519 4_5 - 188 TIGR03533 TIGR03533 284 2.6e-05 16.7 0.0 1 1 3.5e-07 4.9e-05 15.8 0.0 115 208 44 131 39 145 0.83 # 823 # 1386 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 4_5 - 188 TIGR03534 TIGR03534 253 7e-09 28.5 0.0 1 1 1.1e-10 1.6e-08 27.3 0.0 68 189 34 145 1 165 0.83 # 823 # 1386 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 1_26 - 202 HTH_10 PF04967.7 53 0.0006 12.8 0.0 1 1 2.6e-05 0.0018 11.3 0.0 27 46 177 196 173 199 0.86 # 30964 # 31569 # 1 # ID=1_26;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 7_7 - 186 HTH_10 PF04967.7 53 0.00096 12.1 0.0 1 1 6.2e-05 0.0043 10.1 0.0 25 44 24 43 21 46 0.89 # 3600 # 4157 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.548 8_5 - 139 HTH_31 PF13560.1 64 2.9e-06 20.8 0.0 1 1 2.1e-07 1.4e-05 18.6 0.0 5 58 82 133 80 136 0.92 # 1016 # 1432 # 1 # ID=8_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.511 1_26 - 202 HTH_31 PF13560.1 64 0.0033 11.0 4.3 1 2 0.046 3.2 1.5 0.1 15 38 23 56 16 77 0.73 # 30964 # 31569 # 1 # ID=1_26;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_26 - 202 HTH_31 PF13560.1 64 0.0033 11.0 4.3 2 2 9.8e-05 0.0068 10.0 0.5 11 39 170 198 142 201 0.90 # 30964 # 31569 # 1 # ID=1_26;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 3_10 - 323 DUF2075 PF09848.4 352 0.0011 11.4 0.0 1 1 1.1e-05 0.0016 10.8 0.0 2 96 41 137 40 175 0.71 # 6053 # 7021 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.539 4_15 - 680 UvrD_C_2 PF13538.1 104 2.8e-11 36.9 0.0 1 1 1.4e-12 9.9e-11 35.1 0.0 23 104 505 607 490 607 0.83 # 9634 # 11673 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.505 1_23 - 1724 UvrD_C_2 PF13538.1 104 1.6e-05 18.4 0.1 1 1 2.3e-07 1.6e-05 18.4 0.1 4 101 1347 1448 1344 1451 0.72 # 21773 # 26944 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.498 4_5 - 188 TIGR00755 TIGR00755 256 9.1e-07 21.4 0.0 1 1 8.8e-09 1.2e-06 21.0 0.0 8 105 29 123 25 128 0.88 # 823 # 1386 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 2_3 - 325 StbA PF06406.6 318 2.5e-136 447.1 1.7 1 1 2e-138 2.8e-136 446.9 1.7 1 317 1 319 1 320 0.99 # 1207 # 2181 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.478 5_8 - 332 Glyco_transf_9 PF01075.12 247 3.3e-07 23.1 0.2 1 1 5e-08 6.9e-06 18.8 0.2 90 227 170 298 163 320 0.77 # 4545 # 5540 # -1 # ID=5_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.343 4_15 - 680 Viral_helicase1 PF01443.13 234 2.5e-11 36.9 0.0 1 3 3.8e-07 5.3e-05 16.2 0.0 2 60 21 78 20 86 0.84 # 9634 # 11673 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.505 4_15 - 680 Viral_helicase1 PF01443.13 234 2.5e-11 36.9 0.0 2 3 0.00011 0.016 8.1 0.0 62 118 209 263 186 343 0.73 # 9634 # 11673 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.505 4_15 - 680 Viral_helicase1 PF01443.13 234 2.5e-11 36.9 0.0 3 3 0.00053 0.073 5.9 0.0 213 232 572 606 528 608 0.62 # 9634 # 11673 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.505 3_14 - 369 Oxidored_FMN PF00724.15 341 5.2e-84 275.4 0.0 1 1 4.4e-86 6e-84 275.2 0.0 1 339 3 339 3 341 0.87 # 10089 # 11195 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.577 13_1 - 194 Transposase_20 PF02371.11 87 5.7e-25 80.7 0.2 1 1 1.5e-26 1.1e-24 79.8 0.2 2 78 69 145 68 155 0.94 # 259 # 840 # -1 # ID=13_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.483 7_1 - 229 Transposase_20 PF02371.11 87 7.6e-25 80.3 0.2 1 1 2.2e-26 1.5e-24 79.3 0.2 2 78 104 180 103 190 0.94 # 3 # 689 # 1 # ID=7_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.502 2_21 - 468 HTH_Tnp_ISL3 PF13542.1 52 4.8e-05 15.9 0.7 1 2 1.8e-05 0.0012 11.4 0.3 19 51 18 51 13 52 0.93 # 14244 # 15647 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.519 2_21 - 468 HTH_Tnp_ISL3 PF13542.1 52 4.8e-05 15.9 0.7 2 2 0.016 1.1 1.9 0.0 40 51 109 120 106 121 0.83 # 14244 # 15647 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.519 1_26 - 202 HTH_Tnp_ISL3 PF13542.1 52 5.7e-05 15.7 0.2 1 1 2e-06 0.00014 14.4 0.2 29 51 175 197 166 198 0.85 # 30964 # 31569 # 1 # ID=1_26;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 10_1 - 132 CENP-B_N PF04218.8 53 2.7e-06 20.2 0.1 1 1 1.2e-07 8.3e-06 18.6 0.0 8 45 24 62 19 65 0.88 # 65 # 460 # 1 # ID=10_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.538 1_26 - 202 CENP-B_N PF04218.8 53 0.00022 14.0 0.0 1 1 7.9e-06 0.00054 12.8 0.0 21 45 172 196 165 199 0.87 # 30964 # 31569 # 1 # ID=1_26;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_22 - 711 ArgK PF03308.11 267 0.00041 12.5 0.0 1 1 7.3e-06 0.001 11.2 0.0 32 62 196 226 185 229 0.87 # 19639 # 21771 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.433 2_12 - 190 PaaX PF07848.7 70 0.00027 14.3 0.1 1 1 5.7e-06 0.00079 12.8 0.1 12 58 21 70 14 83 0.73 # 9213 # 9782 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.675 1_22 - 711 T4SS-DNA_transf PF02534.9 469 7.1e-13 41.2 0.0 1 2 0.00036 0.049 5.4 0.0 123 178 263 316 241 354 0.82 # 19639 # 21771 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.433 1_22 - 711 T4SS-DNA_transf PF02534.9 469 7.1e-13 41.2 0.0 2 2 1e-12 1.4e-10 33.6 0.0 298 390 422 513 390 566 0.82 # 19639 # 21771 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.433 4_5 - 188 MTS PF05175.9 170 1.8e-09 30.6 0.0 1 1 1.8e-11 2.5e-09 30.1 0.0 24 140 43 148 38 169 0.80 # 823 # 1386 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 3_12 - 258 Eno-Rase_NADH_b PF12242.3 78 9.8e-05 15.5 0.1 1 1 3e-06 0.00041 13.5 0.2 37 65 6 32 1 44 0.77 # 8483 # 9256 # -1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.540 3_12 - 258 3HCDH_N PF02737.13 180 0.00047 13.2 1.1 1 2 9.2e-06 0.0013 11.8 0.5 6 70 15 80 9 94 0.78 # 8483 # 9256 # -1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.540 3_12 - 258 3HCDH_N PF02737.13 180 0.00047 13.2 1.1 2 2 0.055 7.6 -0.5 0.0 12 30 169 187 162 231 0.71 # 8483 # 9256 # -1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.540 14_1 - 235 DDE_Tnp_IS240 PF13610.1 140 1e-52 171.2 0.0 1 1 1.1e-54 1.5e-52 170.7 0.0 4 139 75 212 73 213 0.99 # 53 # 757 # -1 # ID=14_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 8_5 - 139 HTH_26 PF13443.1 63 1.1e-07 25.4 0.0 1 1 2.9e-09 2e-07 24.5 0.0 2 55 83 134 82 138 0.94 # 1016 # 1432 # 1 # ID=8_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.511 1_1 - 291 HTH_26 PF13443.1 63 1.7e-05 18.3 0.0 1 1 5.5e-07 3.8e-05 17.3 0.0 2 63 17 81 16 81 0.89 # 195 # 1067 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.371 2_23 - 403 HTH_17 PF12728.2 51 0.00035 14.2 0.6 1 2 9.5e-05 0.013 9.2 0.0 5 23 27 45 26 71 0.78 # 16522 # 17730 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 2_23 - 403 HTH_17 PF12728.2 51 0.00035 14.2 0.6 2 2 0.011 1.5 2.6 0.1 7 32 96 124 91 139 0.63 # 16522 # 17730 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 5_9 - 256 DDE_Tnp_1_5 PF13737.1 112 7.4e-30 96.8 0.5 1 1 2.6e-31 3.5e-29 94.6 0.1 35 112 1 78 1 78 0.95 # 5605 # 6372 # -1 # ID=5_9;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.542 2_12 - 190 MarR_2 PF12802.2 62 0.00021 14.4 0.2 1 2 0.0011 0.15 5.2 0.1 5 31 10 39 9 41 0.65 # 9213 # 9782 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.675 2_12 - 190 MarR_2 PF12802.2 62 0.00021 14.4 0.2 2 2 0.00043 0.059 6.5 0.0 41 57 55 71 49 74 0.84 # 9213 # 9782 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.675 3_10 - 323 PIF1 PF05970.9 364 2.4e-05 16.8 0.0 1 1 3.4e-07 4.7e-05 15.8 0.0 7 126 27 148 23 166 0.73 # 6053 # 7021 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.539 3_8 - 248 TrmB PF01978.14 68 0.00012 15.2 0.0 1 1 1.7e-06 0.00024 14.2 0.0 20 44 217 241 213 242 0.90 # 3675 # 4418 # 1 # ID=3_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.519 1_11 - 874 AAA_10 PF12846.2 304 1.7e-43 142.5 0.1 1 1 6e-45 2.8e-43 141.8 0.1 1 294 483 769 483 773 0.90 # 6314 # 8935 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.406 1_22 - 711 AAA_10 PF12846.2 304 2.8e-12 40.0 0.0 1 1 2e-13 9.3e-12 38.3 0.0 3 295 195 502 194 508 0.71 # 19639 # 21771 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.433 2_9 - 131 AAA_10 PF12846.2 304 2.1e-05 17.4 0.0 1 1 1.7e-06 8e-05 15.5 0.0 236 264 7 37 2 45 0.87 # 6933 # 7325 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.560 7_7 - 186 HTH_20 PF12840.2 61 0.00025 14.2 0.0 1 1 1.4e-05 0.00095 12.4 0.0 21 46 19 44 6 45 0.85 # 3600 # 4157 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.548 4_9 - 200 HTH_20 PF12840.2 61 0.00049 13.3 0.2 1 1 2.9e-05 0.002 11.4 0.2 23 52 147 177 90 178 0.86 # 4630 # 5229 # 1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.352 4_5 - 188 RrnaAD PF00398.15 262 1.1e-05 17.9 0.0 1 1 1.1e-07 1.5e-05 17.5 0.0 10 113 30 128 26 139 0.87 # 823 # 1386 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 4_5 - 188 Methyltransf_18 PF12847.2 112 2.4e-07 24.7 0.0 1 1 2.8e-09 3.9e-07 24.0 0.0 2 107 51 144 50 146 0.90 # 823 # 1386 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 4_15 - 680 UvrD_C PF13361.1 351 3e-23 76.1 0.0 1 3 0.093 13 -1.6 0.0 61 100 32 71 20 90 0.78 # 9634 # 11673 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.505 4_15 - 680 UvrD_C PF13361.1 351 3e-23 76.1 0.0 2 3 0.00071 0.098 5.4 0.0 74 118 332 377 289 388 0.79 # 9634 # 11673 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.505 4_15 - 680 UvrD_C PF13361.1 351 3e-23 76.1 0.0 3 3 9.9e-23 1.4e-20 67.4 0.0 290 347 538 607 519 611 0.91 # 9634 # 11673 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.505 2_5 - 211 ArsA_ATPase PF02374.10 305 0.00011 14.7 0.8 1 2 8.2e-06 0.0011 11.3 0.9 5 32 7 34 1 46 0.85 # 2795 # 3427 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.491 2_5 - 211 ArsA_ATPase PF02374.10 305 0.00011 14.7 0.8 2 2 0.01 1.4 1.2 0.0 103 134 55 87 38 90 0.82 # 2795 # 3427 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.491 2_5 - 211 AAA_31 PF13614.1 157 2e-06 21.2 0.0 1 2 1e-06 0.00014 15.2 0.0 2 42 4 44 4 54 0.87 # 2795 # 3427 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.491 2_5 - 211 AAA_31 PF13614.1 157 2e-06 21.2 0.0 2 2 0.0033 0.45 3.8 0.0 112 151 72 112 62 117 0.83 # 2795 # 3427 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.491 3_12 - 258 KR PF08659.5 181 1.2e-11 37.9 2.5 1 1 1.8e-13 2.5e-11 36.9 2.5 4 162 11 170 9 190 0.79 # 8483 # 9256 # -1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.540 2_21 - 468 FaeA PF04703.7 62 0.00029 14.4 0.1 1 1 4.4e-06 0.0006 13.4 0.1 13 56 25 68 11 72 0.82 # 14244 # 15647 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.519 4_15 - 680 AAA_11 PF13086.1 236 7.7e-05 15.7 0.1 1 2 2.1e-05 0.0015 11.5 0.0 17 72 17 67 4 147 0.73 # 9634 # 11673 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.505 4_15 - 680 AAA_11 PF13086.1 236 7.7e-05 15.7 0.1 2 2 0.034 2.3 1.0 0.0 24 75 307 359 287 381 0.71 # 9634 # 11673 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.505 1_23 - 1724 AAA_11 PF13086.1 236 0.00064 12.7 6.5 1 3 0.0033 0.23 4.3 0.0 2 68 999 1059 998 1090 0.70 # 21773 # 26944 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.498 1_23 - 1724 AAA_11 PF13086.1 236 0.00064 12.7 6.5 2 3 0.00043 0.03 7.2 0.0 192 231 1090 1132 1066 1134 0.75 # 21773 # 26944 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.498 1_23 - 1724 AAA_11 PF13086.1 236 0.00064 12.7 6.5 3 3 0.043 3 0.7 1.9 98 157 1639 1705 1549 1719 0.66 # 21773 # 26944 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.498 6_1 - 223 SSB PF00436.20 104 1.6e-42 137.0 0.3 1 1 1.8e-44 2.5e-42 136.4 0.3 1 103 58 164 58 165 0.97 # 3 # 671 # 1 # ID=6_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.523 10_2 - 279 HTH_21 PF13276.1 60 7.2e-16 51.4 0.3 1 1 4.4e-17 2e-15 49.9 0.3 3 58 36 94 31 97 0.83 # 463 # 1299 # 1 # ID=10_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.558 2_20 - 511 HTH_21 PF13276.1 60 5.8e-15 48.5 8.3 1 1 2e-16 9.3e-15 47.8 6.6 9 60 271 321 263 323 0.86 # 12600 # 14132 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 2_21 - 468 HTH_21 PF13276.1 60 0.00031 14.1 0.0 1 1 6.7e-06 0.00031 14.1 0.0 29 59 99 129 76 130 0.80 # 14244 # 15647 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.519 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/c60169e9-7232-42d7-ad4e-3e03a38c7811 # Target file: checkm_output/bins/pm710/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm710/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/c60169e9-7232-42d7-ad4e-3e03a38c7811 checkm_output/bins/pm710/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:12:52 2017 # [ok]