# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 5_2 - 370 TrkA_N PF02254.13 116 0.00014 15.7 0.0 1 1 1.3e-06 0.00025 14.9 0.0 1 45 190 236 190 246 0.83 # 565 # 1674 # -1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.566 1_99 - 91 HTH_IclR PF09339.5 52 5.5e-06 19.8 0.0 1 1 1.6e-07 1e-05 18.9 0.0 4 43 9 47 8 49 0.92 # 83679 # 83951 # -1 # ID=1_99;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 3_2 - 66 HTH_IclR PF09339.5 52 0.0001 15.7 1.1 1 1 1.7e-06 0.00011 15.6 0.3 12 46 26 60 24 60 0.88 # 109 # 306 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.561 2_33 - 98 HTH_IclR PF09339.5 52 0.0016 11.9 0.0 1 1 6.2e-05 0.004 10.6 0.0 25 49 38 62 28 64 0.95 # 17147 # 17440 # -1 # ID=2_33;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.490 5_2 - 370 ADH_N PF08240.7 109 6.8e-30 96.9 2.6 1 1 3.5e-32 6.8e-30 96.9 2.6 2 108 28 154 27 155 0.92 # 565 # 1674 # -1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.566 3_11 - 91 HTH_35 PF13693.1 78 2.7e-16 53.0 0.2 1 1 1.8e-18 3.5e-16 52.7 0.2 7 71 20 83 15 89 0.89 # 12024 # 12296 # 1 # ID=3_11;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.505 2_20 - 488 DUF815 PF05673.8 250 3e-06 20.1 0.0 1 1 5e-08 9.6e-06 18.5 0.0 19 154 208 353 194 365 0.75 # 9906 # 11369 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 4_3 - 328 HTH_AsnC-type PF13404.1 42 9.3e-05 15.8 0.0 1 1 1.1e-06 0.00021 14.7 0.0 20 42 36 58 33 58 0.90 # 2853 # 3836 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.596 1_98 - 212 N6_Mtase PF02384.11 311 7.1e-07 22.3 0.0 1 1 5.9e-09 1.1e-06 21.7 0.0 3 97 71 166 69 201 0.72 # 82991 # 83626 # 1 # ID=1_98;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.522 1_27 - 185 TolB_N PF04052.8 105 0.0013 12.7 0.0 1 2 6.8e-05 0.013 9.4 0.0 22 57 25 60 19 72 0.81 # 23188 # 23742 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.485 1_27 - 185 TolB_N PF04052.8 105 0.0013 12.7 0.0 2 2 0.035 6.7 0.7 0.0 45 72 135 163 132 165 0.84 # 23188 # 23742 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.485 1_77 - 622 FtsK_SpoIIIE PF01580.13 205 1.6e-07 24.8 0.0 1 2 3.8e-08 2.5e-06 20.9 0.0 36 81 168 211 136 234 0.79 # 66114 # 67979 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_77 - 622 FtsK_SpoIIIE PF01580.13 205 1.6e-07 24.8 0.0 2 2 0.042 2.7 1.2 0.0 176 204 481 509 472 510 0.86 # 66114 # 67979 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_61 - 816 FtsK_SpoIIIE PF01580.13 205 1.6e-06 21.6 0.1 1 1 6.6e-08 4.3e-06 20.2 0.1 33 84 446 495 401 698 0.67 # 49461 # 51908 # -1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_86 - 206 FtsK_SpoIIIE PF01580.13 205 0.0014 11.9 0.2 1 1 7.1e-05 0.0045 10.3 0.0 34 53 4 23 1 28 0.83 # 76590 # 77207 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.513 3_11 - 91 HTH_38 PF13936.1 44 0.00011 15.6 0.0 1 2 9.7e-05 0.0062 10.0 0.1 9 39 16 47 14 49 0.87 # 12024 # 12296 # 1 # ID=3_11;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.505 3_11 - 91 HTH_38 PF13936.1 44 0.00011 15.6 0.0 2 2 0.0094 0.6 3.6 0.0 25 35 59 69 53 72 0.92 # 12024 # 12296 # 1 # ID=3_11;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.505 2_9 - 313 HTH_38 PF13936.1 44 0.00042 13.7 0.0 1 1 1.7e-05 0.0011 12.4 0.0 5 33 133 162 130 164 0.89 # 4079 # 5017 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.555 1_100 - 394 HTH_38 PF13936.1 44 0.00075 12.9 0.0 1 1 2.2e-05 0.0014 12.0 0.0 5 33 120 149 116 157 0.83 # 84000 # 85181 # -1 # ID=1_100;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.501 5_2 - 370 2-Hacid_dh_C PF02826.14 178 0.00096 12.2 0.1 1 1 9.6e-06 0.0019 11.2 0.1 34 76 185 228 173 240 0.82 # 565 # 1674 # -1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.566 1_77 - 622 MobB PF03205.9 140 0.001 12.6 0.0 1 1 1.7e-05 0.0034 10.9 0.0 4 34 176 206 175 214 0.90 # 66114 # 67979 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 3_6 - 504 UvrD-helicase PF00580.16 315 5.4e-17 55.8 4.2 1 2 9.7e-07 0.00019 14.6 0.1 2 38 8 44 7 64 0.85 # 3184 # 4695 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 3_6 - 504 UvrD-helicase PF00580.16 315 5.4e-17 55.8 4.2 2 2 5.4e-15 1e-12 41.7 0.2 241 305 166 239 72 245 0.78 # 3184 # 4695 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 3_2 - 66 HTH_34 PF13601.1 80 0.00071 13.5 0.0 1 1 4.2e-06 0.00081 13.3 0.0 2 42 18 60 17 65 0.87 # 109 # 306 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.561 2_32 - 101 MarR PF01047.17 59 9.8e-05 15.9 0.0 1 1 9.5e-07 0.00018 15.0 0.0 9 37 33 61 32 63 0.93 # 16818 # 17120 # 1 # ID=2_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 4_3 - 328 HTH_Tnp_4 PF13613.1 53 0.00066 13.1 0.0 1 1 8.4e-06 0.0016 11.8 0.0 18 47 32 61 31 67 0.89 # 2853 # 3836 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.596 3_4 - 347 DUF3584 PF12128.3 1201 0.026 5.6 54.0 1 2 0.0024 0.47 1.4 26.2 415 541 84 214 76 221 0.70 # 1857 # 2897 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.514 3_4 - 347 DUF3584 PF12128.3 1201 0.026 5.6 54.0 2 2 8.2e-06 0.0016 9.6 20.4 613 716 225 327 216 345 0.79 # 1857 # 2897 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.514 1_77 - 622 DUF853 PF05872.7 504 1.6e-06 20.5 0.0 1 1 1.4e-08 2.6e-06 19.8 0.0 7 60 158 211 153 225 0.93 # 66114 # 67979 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 5_4 - 219 TetR_N PF00440.18 47 5.7e-18 58.2 0.0 1 1 5e-20 9.6e-18 57.5 0.0 2 47 10 55 9 55 0.97 # 3049 # 3705 # 1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.551 3_6 - 504 AAA_19 PF13245.1 76 3.6e-09 30.2 0.0 1 1 9.9e-11 9.6e-09 28.8 0.0 8 75 18 77 12 78 0.86 # 3184 # 4695 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_49 - 100 AAA_19 PF13245.1 76 0.00074 13.1 0.3 1 1 1.1e-05 0.001 12.6 0.3 10 30 61 81 51 84 0.69 # 39504 # 39803 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.530 1_101 - 262 CbiA PF01656.18 195 2.3e-30 99.3 0.0 1 1 3e-32 2.9e-30 98.9 0.0 1 170 5 205 5 229 0.77 # 85185 # 85970 # -1 # ID=1_101;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_61 - 816 CbiA PF01656.18 195 0.00075 12.8 0.0 1 1 1.7e-05 0.0016 11.7 0.0 3 49 455 517 454 593 0.60 # 49461 # 51908 # -1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 2_51 - 372 tRNA_Me_trans PF03054.11 356 7.3e-05 15.2 0.0 1 2 1.1e-06 0.00022 13.6 0.0 2 71 52 122 51 144 0.74 # 27024 # 28139 # 1 # ID=2_51;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_51 - 372 tRNA_Me_trans PF03054.11 356 7.3e-05 15.2 0.0 2 2 0.042 8 -1.4 0.0 193 224 274 305 236 311 0.83 # 27024 # 28139 # 1 # ID=2_51;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_100 - 394 Sigma70_r4_2 PF08281.7 54 0.00012 15.4 0.0 1 2 0.027 5.3 0.5 0.0 22 38 115 131 103 131 0.76 # 84000 # 85181 # -1 # ID=1_100;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.501 1_100 - 394 Sigma70_r4_2 PF08281.7 54 0.00012 15.4 0.0 2 2 1.8e-06 0.00034 13.9 0.0 17 48 127 158 122 161 0.91 # 84000 # 85181 # -1 # ID=1_100;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.501 2_54 - 367 Rep_3 PF01051.16 222 2.4e-07 24.4 0.0 1 1 3e-09 5.8e-07 23.1 0.0 43 221 139 322 113 323 0.83 # 29628 # 30728 # -1 # ID=2_54;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.520 8_1 - 235 rve PF00665.21 120 6.3e-13 42.7 0.1 1 2 0.015 2.9 1.9 0.0 78 102 27 49 6 54 0.84 # 66 # 770 # 1 # ID=8_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 8_1 - 235 rve PF00665.21 120 6.3e-13 42.7 0.1 2 2 6.1e-14 1.2e-11 38.7 0.0 9 119 75 182 70 183 0.89 # 66 # 770 # 1 # ID=8_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 7_4 - 349 zf-ribbon_3 PF13248.1 26 0.026 7.7 5.9 1 2 0.00097 0.19 5.0 6.0 4 25 75 101 72 102 0.62 # 1876 # 2922 # 1 # ID=7_4;partial=01;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.611 7_4 - 349 zf-ribbon_3 PF13248.1 26 0.026 7.7 5.9 2 2 6.1e-05 0.012 8.8 1.0 18 24 94 100 92 107 0.74 # 1876 # 2922 # 1 # ID=7_4;partial=01;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.611 2_32 - 101 Fe_dep_repress PF01325.14 60 0.00025 14.8 0.1 1 1 3e-06 0.00057 13.7 0.1 23 42 42 61 23 63 0.84 # 16818 # 17120 # 1 # ID=2_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 2_4 - 415 Methyltransf_26 PF13659.1 117 0.00012 16.0 0.0 1 2 6.1e-06 0.0012 12.8 0.0 68 116 126 180 47 181 0.83 # 1800 # 3044 # -1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.529 2_4 - 415 Methyltransf_26 PF13659.1 117 0.00012 16.0 0.0 2 2 0.04 7.7 0.4 0.0 1 31 352 381 352 395 0.71 # 1800 # 3044 # -1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.529 2_20 - 488 Zeta_toxin PF06414.7 201 0.00032 13.6 0.0 1 1 3.1e-06 0.00061 12.7 0.0 18 52 244 277 239 314 0.90 # 9906 # 11369 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 3_6 - 504 AAA_30 PF13604.1 196 1.3e-07 25.2 0.1 1 2 8.6e-07 0.00017 15.1 0.1 18 80 19 81 11 109 0.77 # 3184 # 4695 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 3_6 - 504 AAA_30 PF13604.1 196 1.3e-07 25.2 0.1 2 2 0.00025 0.048 7.0 0.0 115 133 211 229 174 278 0.75 # 3184 # 4695 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 8_1 - 235 HTH_Tnp_1 PF01527.15 76 0.00048 13.9 0.3 1 1 5.4e-06 0.001 12.9 0.3 4 51 6 58 4 63 0.79 # 66 # 770 # 1 # ID=8_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 2_51 - 372 TIGR02432 TIGR02432 189 7.8e-05 16.2 0.1 1 2 1.1e-05 0.0021 11.5 0.0 1 58 52 109 52 119 0.85 # 27024 # 28139 # 1 # ID=2_51;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_51 - 372 TIGR02432 TIGR02432 189 7.8e-05 16.2 0.1 2 2 0.0084 1.6 2.1 0.0 140 165 235 260 207 262 0.76 # 27024 # 28139 # 1 # ID=2_51;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 4_4 - 609 TraG-D_C PF12696.2 128 3.1e-32 105.0 0.0 1 1 7.4e-34 4.7e-32 104.4 0.0 1 127 401 522 401 523 0.87 # 3968 # 5794 # 1 # ID=4_4;partial=01;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.637 1_77 - 622 TraG-D_C PF12696.2 128 5.5e-15 49.2 0.0 1 1 1.5e-16 9.9e-15 48.4 0.0 1 124 471 595 471 599 0.83 # 66114 # 67979 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_61 - 816 TraG-D_C PF12696.2 128 1.7e-06 21.8 0.0 1 1 6e-08 3.9e-06 20.6 0.0 17 75 674 728 656 734 0.84 # 49461 # 51908 # -1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 8_1 - 235 DDE_3 PF13358.1 146 0.0013 12.3 0.0 1 1 2.1e-05 0.004 10.7 0.0 32 90 82 141 59 146 0.87 # 66 # 770 # 1 # ID=8_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_101 - 262 MipZ PF09140.6 261 3.5e-10 33.2 0.0 1 2 6.6e-10 1.3e-07 24.8 0.0 2 52 4 55 3 81 0.83 # 85185 # 85970 # -1 # ID=1_101;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_101 - 262 MipZ PF09140.6 261 3.5e-10 33.2 0.0 2 2 0.00031 0.061 6.2 0.0 89 122 117 150 89 166 0.74 # 85185 # 85970 # -1 # ID=1_101;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_83 - 403 DDE_Tnp_1 PF01609.16 213 1.7e-27 90.2 0.0 1 1 1.3e-29 2.5e-27 89.6 0.0 4 210 91 328 88 331 0.93 # 74893 # 76101 # -1 # ID=1_83;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.449 1_66 - 439 DivIC PF04977.10 80 0.00046 13.5 5.4 1 2 0.00039 0.076 6.4 0.9 26 55 63 92 48 100 0.74 # 59464 # 60780 # -1 # ID=1_66;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.528 1_66 - 439 DivIC PF04977.10 80 0.00046 13.5 5.4 2 2 6.6e-05 0.013 8.9 0.3 21 48 103 130 94 132 0.89 # 59464 # 60780 # -1 # ID=1_66;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.528 2_32 - 101 Sigma70_r4 PF04545.11 50 0.00024 14.2 0.0 1 1 6.6e-06 0.00042 13.5 0.0 15 42 36 63 35 67 0.88 # 16818 # 17120 # 1 # ID=2_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 2_9 - 313 Sigma70_r4 PF04545.11 50 0.00028 14.0 0.0 1 1 9.7e-06 0.00063 12.9 0.0 5 38 133 167 132 172 0.96 # 4079 # 5017 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.555 1_10 - 84 Sigma70_r4 PF04545.11 50 0.00093 12.4 0.0 1 1 2.2e-05 0.0014 11.8 0.0 16 38 17 39 13 44 0.88 # 8002 # 8253 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.508 1_4 - 100 Thi4 PF01946.12 230 0.0003 13.7 0.1 1 1 1.7e-06 0.00033 13.6 0.1 164 226 16 77 4 81 0.87 # 2547 # 2846 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.493 2_20 - 488 AAA PF00004.24 132 4.1e-29 95.3 0.0 1 1 9.1e-31 1.8e-28 93.3 0.0 1 131 245 371 245 372 0.97 # 9906 # 11369 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 1_100 - 394 KorB PF08535.5 93 1.6e-31 102.2 0.2 1 1 5.9e-33 5.7e-31 100.4 0.0 1 92 134 222 134 223 0.97 # 84000 # 85181 # -1 # ID=1_100;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.501 2_9 - 313 KorB PF08535.5 93 2.3e-07 24.8 0.4 1 1 6.3e-09 6.1e-07 23.4 0.4 3 90 149 232 147 235 0.88 # 4079 # 5017 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.555 2_32 - 101 HTH_37 PF13744.1 80 2e-11 37.4 0.3 1 1 2.4e-13 2.3e-11 37.3 0.3 8 79 11 88 4 89 0.88 # 16818 # 17120 # 1 # ID=2_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 1_10 - 84 HTH_37 PF13744.1 80 2.4e-11 37.2 0.2 1 1 3.1e-13 3e-11 36.9 0.2 17 78 7 67 6 69 0.96 # 8002 # 8253 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.508 1_72 - 221 LexA_DNA_bind PF01726.11 65 0.00084 12.8 0.0 1 1 8.2e-06 0.0016 11.9 0.0 39 62 124 147 118 149 0.87 # 63428 # 64090 # -1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.483 1_99 - 91 Rrf2 PF02082.15 83 0.0011 13.0 0.4 1 1 1.1e-05 0.0021 12.0 0.4 1 52 1 49 1 74 0.86 # 83679 # 83951 # -1 # ID=1_99;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 1_99 - 91 HTH_43 PF09904.4 90 8e-12 38.7 0.0 1 1 4.7e-14 9e-12 38.6 0.0 2 77 2 81 1 89 0.87 # 83679 # 83951 # -1 # ID=1_99;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 1_81 - 731 zf-C4_Topoisom PF01396.14 39 1.5e-14 47.1 16.8 1 2 5.3e-08 1e-05 18.8 4.7 3 37 636 669 634 671 0.90 # 71954 # 74146 # 1 # ID=1_81;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_81 - 731 zf-C4_Topoisom PF01396.14 39 1.5e-14 47.1 16.8 2 2 1.5e-12 3e-10 33.4 4.2 3 38 684 725 683 726 0.89 # 71954 # 74146 # 1 # ID=1_81;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_99 - 91 HTH_27 PF13463.1 68 0.00097 13.3 0.0 1 1 6.4e-06 0.0012 13.0 0.0 8 44 13 48 9 76 0.78 # 83679 # 83951 # -1 # ID=1_99;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 2_4 - 415 N6_N4_Mtase PF01555.13 231 1.1e-24 81.0 0.0 1 1 1.8e-26 1.8e-24 80.3 0.0 1 228 129 389 129 392 0.81 # 1800 # 3044 # -1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_38 - 295 N6_N4_Mtase PF01555.13 231 7.7e-09 29.2 0.1 1 2 3.4e-06 0.00033 14.0 0.0 180 223 28 72 4 76 0.84 # 29060 # 29944 # -1 # ID=1_38;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.511 1_38 - 295 N6_N4_Mtase PF01555.13 231 7.7e-09 29.2 0.1 2 2 7e-06 0.00068 13.0 0.1 2 172 90 267 89 283 0.72 # 29060 # 29944 # -1 # ID=1_38;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.511 1_49 - 100 AAA_16 PF13191.1 185 3.4e-05 17.7 0.0 1 1 6.2e-07 4e-05 17.5 0.0 5 44 45 81 41 86 0.80 # 39504 # 39803 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.530 1_61 - 816 AAA_16 PF13191.1 185 5.8e-05 17.0 0.2 1 1 4.8e-06 0.00031 14.6 0.2 20 62 447 489 439 648 0.64 # 49461 # 51908 # -1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_86 - 206 AAA_16 PF13191.1 185 8.2e-05 16.5 0.1 1 1 1.9e-06 0.00012 15.9 0.1 27 68 11 54 3 168 0.79 # 76590 # 77207 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.513 3_6 - 504 AAA_22 PF13401.1 131 0.00013 16.0 0.0 1 2 0.00014 0.0068 10.4 0.0 7 32 22 47 16 125 0.66 # 3184 # 4695 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 3_6 - 504 AAA_22 PF13401.1 131 0.00013 16.0 0.0 2 2 0.03 1.5 2.9 0.0 82 124 189 225 157 229 0.76 # 3184 # 4695 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_77 - 622 AAA_22 PF13401.1 131 0.00024 15.1 0.0 1 1 1.7e-05 0.0008 13.4 0.0 3 68 171 231 166 287 0.83 # 66114 # 67979 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 2_20 - 488 AAA_22 PF13401.1 131 0.00092 13.2 1.1 1 1 0.0012 0.057 7.4 0.8 69 121 283 344 243 354 0.66 # 9906 # 11369 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 1_49 - 100 AAA_22 PF13401.1 131 0.0014 12.6 0.5 1 1 4.6e-05 0.0022 12.0 0.5 5 24 62 81 50 86 0.86 # 39504 # 39803 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.530 3_6 - 504 TIGR01074 TIGR01074 668 4.6e-10 31.8 0.8 1 3 0.0093 1.8 0.1 0.0 4 33 9 38 7 56 0.82 # 3184 # 4695 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 3_6 - 504 TIGR01074 TIGR01074 668 4.6e-10 31.8 0.8 2 3 4e-07 7.7e-05 14.6 0.0 205 254 192 238 179 271 0.87 # 3184 # 4695 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 3_6 - 504 TIGR01074 TIGR01074 668 4.6e-10 31.8 0.8 3 3 7.5e-07 0.00015 13.6 0.1 534 614 396 472 347 493 0.80 # 3184 # 4695 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 4_3 - 328 NUMOD1 PF07453.8 37 0.0026 11.5 0.0 1 1 2.6e-05 0.0049 10.6 0.0 20 35 37 52 35 54 0.89 # 2853 # 3836 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.596 1_99 - 91 HTH_9 PF08221.6 62 0.00053 13.7 0.0 1 1 4.4e-06 0.00086 13.0 0.0 19 51 14 46 11 47 0.90 # 83679 # 83951 # -1 # ID=1_99;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 1_49 - 100 AAA_29 PF13555.1 62 0.00051 13.4 0.3 1 1 4e-06 0.00078 12.8 0.3 21 38 59 76 52 86 0.87 # 39504 # 39803 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.530 4_3 - 328 HTH_1 PF00126.22 60 2.3e-23 75.6 0.7 1 1 4.1e-25 4e-23 74.8 0.7 4 60 24 80 21 80 0.96 # 2853 # 3836 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.596 1_99 - 91 HTH_1 PF00126.22 60 6.9e-05 16.4 0.0 1 1 1.1e-06 0.0001 15.8 0.0 22 51 31 61 30 76 0.79 # 83679 # 83951 # -1 # ID=1_99;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 3_4 - 347 Mnd1 PF03962.10 188 0.012 9.1 47.4 1 3 0.00049 0.094 6.2 12.1 69 131 86 149 76 152 0.89 # 1857 # 2897 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.514 3_4 - 347 Mnd1 PF03962.10 188 0.012 9.1 47.4 2 3 0.0031 0.6 3.6 10.1 68 143 155 231 149 234 0.71 # 1857 # 2897 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.514 3_4 - 347 Mnd1 PF03962.10 188 0.012 9.1 47.4 3 3 4.8e-05 0.0093 9.4 13.5 62 161 226 326 223 337 0.87 # 1857 # 2897 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.514 8_1 - 235 HTH_32 PF13565.1 77 2.5e-06 22.1 0.2 1 1 5.6e-08 1.1e-05 20.0 0.0 26 76 5 50 2 51 0.83 # 66 # 770 # 1 # ID=8_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 3_6 - 504 TIGR00609 TIGR00609 1175 5.7e-12 38.0 1.4 1 4 0.0051 0.99 0.8 0.0 9 27 18 37 11 48 0.77 # 3184 # 4695 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 3_6 - 504 TIGR00609 TIGR00609 1175 5.7e-12 38.0 1.4 2 4 1.2e-10 2.4e-08 26.0 0.0 368 454 190 270 179 282 0.80 # 3184 # 4695 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 3_6 - 504 TIGR00609 TIGR00609 1175 5.7e-12 38.0 1.4 3 4 0.011 2.1 -0.3 0.0 728 746 412 430 401 437 0.88 # 3184 # 4695 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 3_6 - 504 TIGR00609 TIGR00609 1175 5.7e-12 38.0 1.4 4 4 7.4e-05 0.014 6.8 0.1 789 818 446 475 417 502 0.70 # 3184 # 4695 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_10 - 84 HTH_3 PF01381.17 55 2.9e-12 40.2 0.1 1 1 3.7e-14 3.6e-12 39.9 0.1 2 52 14 64 13 67 0.94 # 8002 # 8253 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.508 2_32 - 101 HTH_3 PF01381.17 55 8.8e-08 25.8 0.1 1 1 1.3e-09 1.3e-07 25.3 0.1 1 44 33 76 33 84 0.86 # 16818 # 17120 # 1 # ID=2_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 8_1 - 235 HTH_23 PF13384.1 50 1.2e-05 18.8 0.7 1 2 0.079 3 1.6 0.0 7 27 11 35 7 36 0.69 # 66 # 770 # 1 # ID=8_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 8_1 - 235 HTH_23 PF13384.1 50 1.2e-05 18.8 0.7 2 2 9.3e-06 0.00036 14.0 0.1 28 42 41 55 40 62 0.87 # 66 # 770 # 1 # ID=8_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 2_9 - 313 HTH_23 PF13384.1 50 1.7e-05 18.2 1.4 1 1 1.6e-06 6.2e-05 16.5 0.1 3 38 134 170 132 176 0.89 # 4079 # 5017 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.555 7_2 - 246 HTH_23 PF13384.1 50 2.4e-05 17.8 0.4 1 1 6.1e-07 2.4e-05 17.8 0.4 2 37 171 206 170 216 0.90 # 707 # 1444 # 1 # ID=7_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.673 1_100 - 394 HTH_23 PF13384.1 50 0.00024 14.6 0.2 1 1 4.3e-05 0.0017 11.9 0.0 4 35 122 154 119 161 0.81 # 84000 # 85181 # -1 # ID=1_100;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.501 5_4 - 219 HTH_23 PF13384.1 50 0.00053 13.5 0.1 1 1 4.5e-05 0.0017 11.9 0.0 10 39 13 47 5 56 0.81 # 3049 # 3705 # 1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.551 7_2 - 246 HTH_7 PF02796.10 45 1.6e-07 25.0 0.1 1 1 1.9e-09 3.6e-07 23.8 0.1 8 44 173 209 168 210 0.87 # 707 # 1444 # 1 # ID=7_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.673 7_4 - 349 Ribosomal_S27e PF01667.12 55 0.00094 12.6 1.1 1 1 9e-06 0.0017 11.7 1.1 5 33 71 99 68 104 0.90 # 1876 # 2922 # 1 # ID=7_4;partial=01;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.611 1_10 - 84 HTH_19 PF12844.2 64 2.6e-08 27.7 0.0 1 1 3.7e-10 3.5e-08 27.3 0.0 3 54 12 63 10 65 0.86 # 8002 # 8253 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.508 2_32 - 101 HTH_19 PF12844.2 64 7e-08 26.3 0.0 1 1 1e-09 1e-07 25.8 0.0 4 52 33 81 31 86 0.95 # 16818 # 17120 # 1 # ID=2_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 7_4 - 349 zinc_ribbon_4 PF13717.1 36 0.00089 12.8 0.2 1 2 0.00033 0.063 6.9 0.1 2 14 73 85 73 87 0.84 # 1876 # 2922 # 1 # ID=7_4;partial=01;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.611 7_4 - 349 zinc_ribbon_4 PF13717.1 36 0.00089 12.8 0.2 2 2 0.0041 0.8 3.4 0.0 5 14 95 104 94 112 0.81 # 1876 # 2922 # 1 # ID=7_4;partial=01;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.611 2_20 - 488 Mg_chelatase PF01078.16 207 0.0011 12.0 0.1 1 1 1.1e-05 0.0022 11.0 0.1 1 47 215 267 215 281 0.79 # 9906 # 11369 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 5_2 - 370 Met_10 PF02475.11 200 0.00016 15.2 0.0 1 1 1.4e-06 0.00027 14.4 0.0 98 143 183 229 178 305 0.81 # 565 # 1674 # -1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.566 8_1 - 235 DDE_Tnp_IS66 PF03050.9 271 4.5e-12 39.5 0.3 1 1 3e-14 5.7e-12 39.2 0.3 5 132 10 144 6 174 0.87 # 66 # 770 # 1 # ID=8_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_49 - 100 Arch_ATPase PF01637.13 234 4.4e-05 17.1 0.0 1 1 2.9e-07 5.6e-05 16.7 0.0 4 41 45 82 43 91 0.92 # 39504 # 39803 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.530 3_6 - 504 PhoH PF02562.11 205 1.2e-05 18.4 0.3 1 2 0.001 0.19 4.7 0.0 21 45 21 45 5 61 0.77 # 3184 # 4695 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 3_6 - 504 PhoH PF02562.11 205 1.2e-05 18.4 0.3 2 2 2.3e-05 0.0044 10.1 0.0 122 168 196 240 193 255 0.83 # 3184 # 4695 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_48 - 226 AAA_5 PF07728.9 139 6.9e-10 32.6 0.0 1 1 5.8e-12 1.1e-09 32.0 0.0 52 125 23 91 1 100 0.87 # 38836 # 39513 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.541 2_20 - 488 TIGR00763 TIGR00763 795 2.5e-05 16.4 0.1 1 1 9.9e-07 0.00019 13.4 0.1 340 520 227 395 218 407 0.79 # 9906 # 11369 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 3_6 - 504 ResIII PF04851.10 184 3.7e-06 20.7 0.0 1 1 1.1e-07 1e-05 19.2 0.0 23 75 17 69 6 106 0.79 # 3184 # 4695 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_77 - 622 ResIII PF04851.10 184 0.0002 15.0 0.0 1 1 4.2e-06 0.00041 14.0 0.0 23 57 170 206 129 214 0.74 # 66114 # 67979 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 2_51 - 372 PAPS_reduct PF01507.14 174 6.8e-12 39.4 0.4 1 2 0.028 2.7 1.6 0.0 2 17 53 68 52 91 0.76 # 27024 # 28139 # 1 # ID=2_51;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_51 - 372 PAPS_reduct PF01507.14 174 6.8e-12 39.4 0.4 2 2 8.8e-13 8.5e-11 35.8 0.1 58 172 154 279 145 281 0.85 # 27024 # 28139 # 1 # ID=2_51;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_25 - 818 PAPS_reduct PF01507.14 174 1.3e-05 18.9 0.0 1 1 8.4e-07 8.1e-05 16.3 0.0 3 152 69 257 67 264 0.72 # 20030 # 22483 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.524 4_4 - 609 TrwB_AAD_bind PF10412.4 386 1.4e-30 100.0 0.0 1 1 6.9e-32 4.4e-30 98.3 0.0 44 381 171 537 140 542 0.83 # 3968 # 5794 # 1 # ID=4_4;partial=01;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.637 1_77 - 622 TrwB_AAD_bind PF10412.4 386 3.8e-19 62.3 0.0 1 2 1.3e-12 8.6e-11 34.8 0.0 10 54 167 211 161 313 0.70 # 66114 # 67979 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_77 - 622 TrwB_AAD_bind PF10412.4 386 3.8e-19 62.3 0.0 2 2 1e-09 6.7e-08 25.3 0.0 242 377 469 609 445 616 0.82 # 66114 # 67979 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_61 - 816 TrwB_AAD_bind PF10412.4 386 4.3e-08 25.9 0.0 1 2 2.2e-05 0.0014 11.1 0.0 6 72 442 517 438 520 0.85 # 49461 # 51908 # -1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_61 - 816 TrwB_AAD_bind PF10412.4 386 4.3e-08 25.9 0.0 2 2 8.4e-06 0.00054 12.4 0.1 232 301 643 712 613 731 0.66 # 49461 # 51908 # -1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_101 - 262 TIGR01968 TIGR01968 261 9.9e-09 28.4 0.1 1 2 5e-07 9.7e-05 15.3 0.1 2 39 3 41 2 45 0.84 # 85185 # 85970 # -1 # ID=1_101;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_101 - 262 TIGR01968 TIGR01968 261 9.9e-09 28.4 0.1 2 2 9e-06 0.0017 11.2 0.0 105 135 120 150 111 218 0.80 # 85185 # 85970 # -1 # ID=1_101;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 5_4 - 219 HTH_psq PF05225.11 45 7.2e-05 16.2 0.0 1 2 1.4e-05 0.0026 11.2 0.0 5 39 10 47 6 52 0.84 # 3049 # 3705 # 1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.551 5_4 - 219 HTH_psq PF05225.11 45 7.2e-05 16.2 0.0 2 2 0.0074 1.4 2.4 0.0 12 22 79 89 77 93 0.87 # 3049 # 3705 # 1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.551 1_19 - 576 zf-CHC2 PF01807.15 98 0.0011 12.3 0.0 1 1 1.3e-05 0.0025 11.2 0.0 35 94 40 101 30 104 0.75 # 15218 # 16945 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.531 1_77 - 622 DUF87 PF01935.12 229 1.4e-08 28.6 0.1 1 1 3.3e-10 3.2e-08 27.5 0.1 24 63 173 211 168 379 0.87 # 66114 # 67979 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_61 - 816 DUF87 PF01935.12 229 5.2e-08 26.8 0.2 1 1 1.1e-09 1.1e-07 25.7 0.2 24 167 452 591 432 654 0.69 # 49461 # 51908 # -1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 8_1 - 235 HTH_28 PF13518.1 52 0.00011 16.0 1.2 1 1 5.1e-06 0.00049 14.0 1.2 22 36 40 54 13 55 0.76 # 66 # 770 # 1 # ID=8_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 7_2 - 246 HTH_28 PF13518.1 52 0.0006 13.7 0.7 1 1 6.3e-06 0.0006 13.7 0.7 1 33 175 207 175 209 0.95 # 707 # 1444 # 1 # ID=7_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.673 5_4 - 219 HTH_Tnp_1_2 PF13022.1 142 0.00039 14.1 0.0 1 1 3.4e-06 0.00066 13.3 0.0 24 77 13 64 2 68 0.78 # 3049 # 3705 # 1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.551 4_3 - 328 HTH_24 PF13412.1 48 8.8e-06 18.9 0.0 1 1 5.2e-07 1.7e-05 18.0 0.0 16 44 32 60 23 60 0.87 # 2853 # 3836 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.596 3_2 - 66 HTH_24 PF13412.1 48 2.9e-05 17.3 0.0 1 1 1.4e-06 4.5e-05 16.7 0.0 4 45 17 60 15 61 0.93 # 109 # 306 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.561 1_99 - 91 HTH_24 PF13412.1 48 3.4e-05 17.0 0.1 1 1 1.6e-06 5.3e-05 16.4 0.1 5 44 10 49 7 49 0.93 # 83679 # 83951 # -1 # ID=1_99;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 1_100 - 394 HTH_24 PF13412.1 48 3.7e-05 16.9 0.3 1 2 0.00096 0.031 7.6 0.2 1 29 104 131 104 131 0.90 # 84000 # 85181 # -1 # ID=1_100;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.501 1_100 - 394 HTH_24 PF13412.1 48 3.7e-05 16.9 0.3 2 2 0.0014 0.045 7.0 0.0 20 41 139 160 138 161 0.90 # 84000 # 85181 # -1 # ID=1_100;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.501 5_4 - 219 HTH_24 PF13412.1 48 0.00012 15.3 0.0 1 1 1.7e-05 0.00053 13.2 0.0 15 40 23 47 13 50 0.84 # 3049 # 3705 # 1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.551 1_10 - 84 HTH_24 PF13412.1 48 0.0007 12.8 1.0 1 1 4.2e-05 0.0014 11.9 0.1 16 35 20 39 17 40 0.91 # 8002 # 8253 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.508 1_61 - 816 Guanylate_kin PF00625.16 183 0.00031 14.0 0.1 1 3 0.0039 0.74 3.0 0.0 3 26 452 475 450 503 0.86 # 49461 # 51908 # -1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_61 - 816 Guanylate_kin PF00625.16 183 0.00031 14.0 0.1 2 3 0.012 2.3 1.4 0.0 76 115 597 637 591 703 0.82 # 49461 # 51908 # -1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_61 - 816 Guanylate_kin PF00625.16 183 0.00031 14.0 0.1 3 3 0.001 0.2 4.9 0.0 75 131 714 770 697 777 0.87 # 49461 # 51908 # -1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 4_3 - 328 HTH_30 PF13556.1 59 7.9e-05 16.1 0.0 1 1 8.7e-07 0.00017 15.0 0.0 10 43 31 64 25 72 0.88 # 2853 # 3836 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.596 5_2 - 370 MinC_C PF03775.11 105 0.0011 12.5 0.8 1 2 5e-05 0.0097 9.4 0.1 23 95 175 249 167 253 0.88 # 565 # 1674 # -1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.566 5_2 - 370 MinC_C PF03775.11 105 0.0011 12.5 0.8 2 2 0.018 3.4 1.2 0.0 15 78 277 343 267 365 0.69 # 565 # 1674 # -1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.566 1_77 - 622 DEAD PF00270.24 169 4.5e-05 16.8 0.0 1 1 8.7e-07 8.4e-05 15.9 0.0 13 52 171 208 159 231 0.85 # 66114 # 67979 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_49 - 100 DEAD PF00270.24 169 0.002 11.4 0.1 1 1 2.6e-05 0.0025 11.2 0.1 14 29 60 76 46 87 0.75 # 39504 # 39803 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.530 1_10 - 84 HTH_31 PF13560.1 64 1.5e-08 28.7 0.2 1 1 1.9e-10 1.8e-08 28.4 0.2 2 59 9 65 8 70 0.93 # 8002 # 8253 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.508 2_32 - 101 HTH_31 PF13560.1 64 1.8e-07 25.1 0.0 1 1 2.7e-09 2.6e-07 24.6 0.0 5 55 32 81 29 90 0.90 # 16818 # 17120 # 1 # ID=2_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 3_6 - 504 UvrD_C_2 PF13538.1 104 1.5e-10 35.1 0.0 1 1 3.5e-12 6.7e-10 32.9 0.0 46 99 393 463 352 467 0.67 # 3184 # 4695 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 2_21 - 311 TIGR01973 TIGR01973 606 2.9e-05 16.5 0.8 1 1 2.2e-07 4.2e-05 16.0 0.8 384 504 62 181 59 212 0.85 # 11443 # 12375 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.508 1_49 - 100 T2SE PF00437.15 272 2.4e-05 17.1 0.0 1 1 2.6e-07 2.5e-05 17.1 0.0 103 143 38 76 6 85 0.77 # 39504 # 39803 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.530 1_77 - 622 T2SE PF00437.15 272 0.00036 13.3 0.0 1 1 5.9e-06 0.00057 12.6 0.0 116 162 163 206 124 227 0.78 # 66114 # 67979 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 2_20 - 488 AAA_17 PF13207.1 121 0.00024 15.8 0.0 1 1 6.3e-06 0.0012 13.5 0.0 2 63 245 299 245 388 0.63 # 9906 # 11369 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 2_20 - 488 AAA_25 PF13481.1 194 0.00012 15.3 3.6 1 3 0.049 2.4 1.3 1.4 36 55 245 264 224 275 0.81 # 9906 # 11369 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 2_20 - 488 AAA_25 PF13481.1 194 0.00012 15.3 3.6 2 3 0.00014 0.0068 9.6 0.0 127 176 287 336 270 348 0.69 # 9906 # 11369 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 2_20 - 488 AAA_25 PF13481.1 194 0.00012 15.3 3.6 3 3 0.017 0.8 2.9 0.0 69 172 337 440 325 448 0.66 # 9906 # 11369 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 1_61 - 816 AAA_25 PF13481.1 194 0.00067 12.9 0.0 1 1 3.4e-05 0.0016 11.6 0.0 36 86 454 494 447 532 0.82 # 49461 # 51908 # -1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_101 - 262 AAA_25 PF13481.1 194 0.00075 12.7 0.0 1 1 2.4e-05 0.0012 12.1 0.0 42 91 12 51 11 134 0.78 # 85185 # 85970 # -1 # ID=1_101;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_77 - 622 AAA_25 PF13481.1 194 0.00075 12.7 0.0 1 1 4.9e-05 0.0024 11.1 0.0 20 137 159 265 145 272 0.78 # 66114 # 67979 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 3_6 - 504 Viral_helicase1 PF01443.13 234 1.9e-10 34.4 0.0 1 3 1.4e-05 0.0027 11.0 0.0 2 49 23 73 22 87 0.67 # 3184 # 4695 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 3_6 - 504 Viral_helicase1 PF01443.13 234 1.9e-10 34.4 0.0 2 3 2.1e-05 0.004 10.5 0.0 56 105 188 234 147 256 0.78 # 3184 # 4695 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 3_6 - 504 Viral_helicase1 PF01443.13 234 1.9e-10 34.4 0.0 3 3 5.2e-05 0.01 9.2 0.0 176 227 404 462 344 467 0.75 # 3184 # 4695 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 3_6 - 504 AAA_14 PF13173.1 128 7.7e-05 16.4 1.5 1 2 3.3e-05 0.0063 10.3 0.1 12 46 29 62 19 155 0.78 # 3184 # 4695 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 3_6 - 504 AAA_14 PF13173.1 128 7.7e-05 16.4 1.5 2 2 0.0024 0.46 4.2 0.0 50 97 175 225 129 235 0.69 # 3184 # 4695 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_99 - 91 Mga PF05043.8 87 0.00049 14.2 0.1 1 1 3.1e-06 0.00061 13.9 0.1 17 55 9 47 2 62 0.89 # 83679 # 83951 # -1 # ID=1_99;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 6_2 - 335 Transposase_20 PF02371.11 87 2.1e-24 79.3 0.2 1 1 4.6e-26 4.5e-24 78.3 0.2 2 78 210 286 209 296 0.94 # 1972 # 2976 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.490 1_2 - 335 Transposase_20 PF02371.11 87 2.1e-24 79.3 0.2 1 1 4.6e-26 4.5e-24 78.3 0.2 2 78 210 286 209 296 0.94 # 183 # 1187 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.482 2_20 - 488 AAA_33 PF13671.1 143 0.00053 13.7 0.0 1 1 1.6e-05 0.0016 12.2 0.0 2 33 245 297 245 399 0.73 # 9906 # 11369 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 1_46 - 176 AAA_33 PF13671.1 143 0.0011 12.7 0.0 1 1 1.7e-05 0.0017 12.1 0.0 26 102 33 104 23 109 0.75 # 37325 # 37852 # -1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.544 5_4 - 219 CENP-B_N PF04218.8 53 0.00096 12.4 0.0 1 1 1.2e-05 0.0022 11.3 0.0 26 51 28 53 23 55 0.91 # 3049 # 3705 # 1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.551 1_42 - 599 DUF2201_N PF13203.1 292 0.00016 14.7 14.7 1 2 0.0007 0.13 5.1 0.0 36 102 31 95 11 131 0.71 # 31810 # 33606 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.533 1_42 - 599 DUF2201_N PF13203.1 292 0.00016 14.7 14.7 2 2 2.7e-05 0.0053 9.7 11.9 116 240 173 327 162 341 0.51 # 31810 # 33606 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.533 1_77 - 622 ArgK PF03308.11 267 0.00021 13.9 0.0 1 1 1.8e-06 0.00036 13.2 0.0 12 68 158 209 153 214 0.88 # 66114 # 67979 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 2_33 - 98 PaaX PF07848.7 70 0.0002 15.2 0.0 1 1 1.4e-06 0.00027 14.8 0.0 19 70 28 79 10 79 0.88 # 17147 # 17440 # -1 # ID=2_33;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.490 4_4 - 609 T4SS-DNA_transf PF02534.9 469 1.4e-104 344.1 0.0 1 1 1.7e-106 1.7e-104 343.8 0.0 1 460 111 557 111 566 0.90 # 3968 # 5794 # 1 # ID=4_4;partial=01;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.637 1_77 - 622 T4SS-DNA_transf PF02534.9 469 5e-05 15.8 0.0 1 1 1.1e-06 0.00011 14.7 0.0 37 114 168 248 125 346 0.72 # 66114 # 67979 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 2_20 - 488 AAA_2 PF07724.9 171 6.8e-06 19.9 0.0 1 1 1.9e-07 3.8e-05 17.5 0.0 6 92 245 325 240 333 0.90 # 9906 # 11369 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 1_29 - 542 DNA_methylase PF00145.12 335 1.2e-28 94.0 0.0 1 1 6.3e-30 6.1e-28 91.7 0.0 3 333 126 441 124 443 0.77 # 24307 # 25932 # -1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.515 1_90 - 476 DNA_methylase PF00145.12 335 2e-10 34.1 0.0 1 2 4.1e-11 4e-09 29.8 0.0 71 160 228 320 199 324 0.83 # 78381 # 79808 # -1 # ID=1_90;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.533 1_90 - 476 DNA_methylase PF00145.12 335 2e-10 34.1 0.0 2 2 0.011 1.1 2.1 0.0 290 330 407 448 343 452 0.74 # 78381 # 79808 # -1 # ID=1_90;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.533 2_51 - 372 ATP_bind_3 PF01171.15 182 0.00029 14.2 0.0 1 2 5.2e-05 0.01 9.2 0.0 1 59 52 110 52 129 0.78 # 27024 # 28139 # 1 # ID=2_51;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_51 - 372 ATP_bind_3 PF01171.15 182 0.00029 14.2 0.0 2 2 0.005 0.97 2.7 0.0 134 161 232 260 207 262 0.72 # 27024 # 28139 # 1 # ID=2_51;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 7_4 - 349 zinc_ribbon_5 PF13719.1 37 0.00045 13.7 0.1 1 2 0.00021 0.04 7.4 0.0 2 14 73 85 72 87 0.84 # 1876 # 2922 # 1 # ID=7_4;partial=01;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.611 7_4 - 349 zinc_ribbon_5 PF13719.1 37 0.00045 13.7 0.1 2 2 0.0031 0.59 3.7 0.0 5 15 95 105 94 114 0.81 # 1876 # 2922 # 1 # ID=7_4;partial=01;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.611 2_51 - 372 TIGR00420 TIGR00420 351 0.0019 10.5 0.0 1 2 0.00011 0.021 7.2 0.0 2 64 52 110 51 128 0.77 # 27024 # 28139 # 1 # ID=2_51;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_51 - 372 TIGR00420 TIGR00420 351 0.0019 10.5 0.0 2 2 0.0073 1.4 1.1 0.0 192 223 274 305 245 313 0.89 # 27024 # 28139 # 1 # ID=2_51;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 8_1 - 235 DDE_Tnp_IS240 PF13610.1 140 1.5e-52 171.2 0.0 1 1 1.1e-54 2e-52 170.7 0.0 4 139 75 212 73 213 0.99 # 66 # 770 # 1 # ID=8_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_10 - 84 HTH_26 PF13443.1 63 0.00013 16.0 0.0 1 1 2.8e-06 0.00018 15.5 0.0 10 53 21 63 9 65 0.82 # 8002 # 8253 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.508 2_30 - 183 HTH_26 PF13443.1 63 0.00017 15.6 0.1 1 2 0.0067 0.43 4.7 0.0 9 48 53 91 45 92 0.86 # 15752 # 16300 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.530 2_30 - 183 HTH_26 PF13443.1 63 0.00017 15.6 0.1 2 2 0.00054 0.035 8.2 0.0 39 56 163 180 155 182 0.92 # 15752 # 16300 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.530 5_4 - 219 HTH_26 PF13443.1 63 0.0012 12.9 0.0 1 1 3.8e-05 0.0025 11.9 0.0 5 40 16 52 14 61 0.81 # 3049 # 3705 # 1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.551 1_81 - 731 Zn-ribbon_8 PF09723.5 42 0.013 9.3 6.9 1 2 0.0093 0.9 3.5 0.1 23 40 631 647 624 648 0.85 # 71954 # 74146 # 1 # ID=1_81;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_81 - 731 Zn-ribbon_8 PF09723.5 42 0.013 9.3 6.9 2 2 0.0012 0.11 6.3 3.4 20 38 676 693 657 696 0.81 # 71954 # 74146 # 1 # ID=1_81;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 7_4 - 349 Zn-ribbon_8 PF09723.5 42 0.029 8.2 5.2 1 1 0.00066 0.063 7.1 5.2 7 35 75 101 75 105 0.89 # 1876 # 2922 # 1 # ID=7_4;partial=01;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.611 1_19 - 576 Prim_Zn_Ribbon PF08273.7 40 6.3e-14 45.7 4.2 1 1 5.8e-16 1.1e-13 44.9 4.2 1 40 36 74 36 74 0.95 # 15218 # 16945 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.531 1_99 - 91 HTH_11 PF08279.7 55 0.00068 13.1 0.0 1 1 4.7e-06 0.00092 12.7 0.0 1 46 9 54 9 70 0.77 # 83679 # 83951 # -1 # ID=1_99;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 3_2 - 66 MarR_2 PF12802.2 62 1.2e-05 18.8 0.1 1 1 3e-07 2e-05 18.1 0.1 12 49 23 60 4 60 0.84 # 109 # 306 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.561 2_32 - 101 MarR_2 PF12802.2 62 1.3e-05 18.6 0.0 1 1 4.3e-07 2.8e-05 17.6 0.0 11 40 33 60 28 61 0.93 # 16818 # 17120 # 1 # ID=2_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 4_3 - 328 MarR_2 PF12802.2 62 0.00085 12.9 0.1 1 1 2.7e-05 0.0017 11.9 0.1 22 47 34 59 23 71 0.86 # 2853 # 3836 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.596 3_2 - 66 HTH_5 PF01022.15 47 4.8e-10 32.8 0.2 1 1 7.5e-12 4.8e-10 32.8 0.2 1 43 15 60 15 60 0.93 # 109 # 306 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.561 1_99 - 91 HTH_5 PF01022.15 47 5.4e-06 19.9 0.0 1 1 1.2e-07 7.8e-06 19.4 0.0 6 41 12 48 8 49 0.91 # 83679 # 83951 # -1 # ID=1_99;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 2_32 - 101 HTH_5 PF01022.15 47 0.00085 12.9 0.0 1 1 2.9e-05 0.0019 11.7 0.0 15 34 41 60 33 60 0.84 # 16818 # 17120 # 1 # ID=2_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 3_2 - 66 TrmB PF01978.14 68 0.00015 15.3 0.0 1 1 2.2e-06 0.00021 14.8 0.0 12 50 20 60 17 61 0.92 # 109 # 306 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.561 1_99 - 91 TrmB PF01978.14 68 0.0018 11.9 0.0 1 1 2.8e-05 0.0027 11.3 0.0 19 48 19 48 11 52 0.85 # 83679 # 83951 # -1 # ID=1_99;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 1_104 - 101 TIGR01455 TIGR01455 442 4.8e-33 108.0 0.5 1 1 2.9e-35 5.7e-33 107.7 0.5 1 77 6 81 6 83 0.96 # 87664 # 87966 # 1 # ID=1_104;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.581 2_32 - 101 HTH_Crp_2 PF13545.1 76 2.4e-05 17.9 0.0 1 1 2.1e-07 4e-05 17.2 0.0 24 48 37 61 23 63 0.81 # 16818 # 17120 # 1 # ID=2_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 1_99 - 91 HTH_Mga PF08280.6 59 1.7e-06 21.6 0.0 1 1 1e-08 2e-06 21.4 0.0 2 54 5 57 4 62 0.93 # 83679 # 83951 # -1 # ID=1_99;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 3_4 - 347 Seryl_tRNA_N PF02403.17 108 0.005 10.7 43.9 1 4 0.0023 0.44 4.5 9.9 39 98 89 152 80 158 0.79 # 1857 # 2897 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.514 3_4 - 347 Seryl_tRNA_N PF02403.17 108 0.005 10.7 43.9 2 4 0.0003 0.057 7.3 4.4 48 99 144 195 143 199 0.94 # 1857 # 2897 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.514 3_4 - 347 Seryl_tRNA_N PF02403.17 108 0.005 10.7 43.9 3 4 2.9e-06 0.00057 13.8 10.7 20 100 217 294 201 297 0.85 # 1857 # 2897 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.514 3_4 - 347 Seryl_tRNA_N PF02403.17 108 0.005 10.7 43.9 4 4 0.00064 0.12 6.2 1.0 67 105 289 327 286 329 0.91 # 1857 # 2897 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.514 1_61 - 816 AAA_10 PF12846.2 304 5.2e-59 193.9 0.1 1 1 9e-61 8.7e-59 193.2 0.1 1 296 451 729 451 738 0.93 # 49461 # 51908 # -1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_77 - 622 AAA_10 PF12846.2 304 1.8e-18 60.8 0.2 1 1 5.3e-20 5.1e-18 59.3 0.2 2 299 173 549 172 553 0.71 # 66114 # 67979 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 3_2 - 66 HTH_20 PF12840.2 61 3.6e-15 49.4 0.5 1 1 4.7e-17 4.5e-15 49.1 0.5 3 52 9 60 5 60 0.94 # 109 # 306 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.561 4_3 - 328 HTH_20 PF12840.2 61 1.8e-05 18.3 0.1 1 1 4e-07 3.9e-05 17.3 0.1 16 59 25 69 21 71 0.86 # 2853 # 3836 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.596 1_83 - 403 Dimerisation PF08100.6 51 0.00079 13.1 0.2 1 1 2.9e-05 0.0057 10.4 0.0 16 47 29 65 27 66 0.80 # 74893 # 76101 # -1 # ID=1_83;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.449 1_93 - 169 DnaJ_CXXCXGXG PF00684.14 66 0.00015 15.7 2.0 1 1 2.5e-06 0.00047 14.0 2.0 1 31 6 37 6 48 0.74 # 80638 # 81144 # -1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.544 3_6 - 504 UvrD_C PF13361.1 351 1.8e-10 34.6 0.0 1 1 1.7e-12 3.3e-10 33.7 0.0 238 347 359 468 334 472 0.76 # 3184 # 4695 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 3_4 - 347 AAA_13 PF13166.1 712 0.023 6.9 35.0 1 2 0.0025 0.48 2.6 10.5 400 479 91 169 40 180 0.53 # 1857 # 2897 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.514 3_4 - 347 AAA_13 PF13166.1 712 0.023 6.9 35.0 2 2 0.0041 0.8 1.8 34.8 286 464 123 294 76 343 0.50 # 1857 # 2897 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.514 1_101 - 262 ArsA_ATPase PF02374.10 305 1.1e-05 18.4 0.0 1 2 3e-07 5.8e-05 16.0 0.0 7 40 9 43 2 79 0.84 # 85185 # 85970 # -1 # ID=1_101;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_101 - 262 ArsA_ATPase PF02374.10 305 1.1e-05 18.4 0.0 2 2 0.029 5.6 -0.3 0.0 124 136 124 136 106 143 0.79 # 85185 # 85970 # -1 # ID=1_101;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_101 - 262 AAA_31 PF13614.1 157 2.5e-10 34.3 0.0 1 1 2.6e-12 5.1e-10 33.3 0.0 1 149 3 157 3 165 0.79 # 85185 # 85970 # -1 # ID=1_101;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_103 - 272 Pterin_bind PF00809.17 210 5.4e-60 196.1 0.0 1 1 3.4e-62 6.5e-60 195.9 0.0 1 209 10 216 10 217 0.98 # 86762 # 87577 # 1 # ID=1_103;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.608 5_2 - 370 ADH_zinc_N PF00107.21 130 2.5e-23 75.9 0.2 1 1 2e-25 3.9e-23 75.3 0.2 1 128 197 330 197 332 0.90 # 565 # 1674 # -1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.566 3_6 - 504 AAA_11 PF13086.1 236 4.5e-07 23.5 0.1 1 1 1.8e-08 3.5e-06 20.6 0.1 22 228 24 228 9 229 0.70 # 3184 # 4695 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_46 - 176 SSB PF00436.20 104 2.4e-41 133.7 0.3 1 1 1.5e-43 3e-41 133.4 0.3 1 104 5 109 5 109 0.99 # 37325 # 37852 # -1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.544 5_2 - 370 ADH_zinc_N_2 PF13602.1 127 1.7e-05 19.5 0.0 1 1 2.1e-07 4e-05 18.4 0.0 2 121 231 362 230 363 0.63 # 565 # 1674 # -1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.566 1_81 - 731 Zn_ribbon_recom PF13408.1 58 9.2e-06 19.7 8.2 1 2 0.00033 0.063 7.5 0.7 8 40 637 668 636 680 0.71 # 71954 # 74146 # 1 # ID=1_81;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_81 - 731 Zn_ribbon_recom PF13408.1 58 9.2e-06 19.7 8.2 2 2 1.1e-06 0.0002 15.4 1.4 8 41 685 719 685 728 0.80 # 71954 # 74146 # 1 # ID=1_81;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/801990ef-4ded-45de-ae71-0a49e878d87c # Target file: checkm_output/bins/pm709/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm709/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/801990ef-4ded-45de-ae71-0a49e878d87c checkm_output/bins/pm709/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:12:51 2017 # [ok]