# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 4_3 - 388 KaiC PF06745.8 227 0.001 11.4 0.0 1 1 1.5e-05 0.0017 10.6 0.0 14 59 147 191 137 201 0.76 # 1595 # 2758 # -1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_21 - 562 K_oxygenase PF13434.1 341 4e-06 19.0 0.2 1 3 0.0041 0.48 2.3 0.2 187 223 95 129 86 132 0.74 # 19272 # 20957 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_21 - 562 K_oxygenase PF13434.1 341 4e-06 19.0 0.2 2 3 2.9e-06 0.00034 12.7 0.0 130 231 217 309 200 339 0.79 # 19272 # 20957 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_21 - 562 K_oxygenase PF13434.1 341 4e-06 19.0 0.2 3 3 0.022 2.6 -0.0 0.0 139 160 345 366 314 376 0.63 # 19272 # 20957 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_2 - 186 HTH_IclR PF09339.5 52 1.5e-05 17.7 0.2 1 1 4.6e-07 5.4e-05 15.9 0.0 15 40 155 180 151 181 0.85 # 1189 # 1746 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.529 4_3 - 388 ABC_tran PF00005.22 137 0.00017 15.1 0.0 1 1 2.7e-06 0.00032 14.2 0.0 16 33 157 174 149 217 0.83 # 1595 # 2758 # -1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_9 - 187 HTH_22 PF13309.1 64 6.7e-06 19.0 0.3 1 2 0.045 2.7 1.1 0.0 23 38 70 85 58 87 0.81 # 10175 # 10735 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.579 1_9 - 187 HTH_22 PF13309.1 64 6.7e-06 19.0 0.3 2 2 2.7e-06 0.00016 14.6 0.0 47 64 166 183 164 183 0.93 # 10175 # 10735 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.579 1_2 - 186 HTH_22 PF13309.1 64 0.00028 13.8 1.2 1 1 2.4e-05 0.0014 11.6 0.1 35 63 156 179 143 180 0.76 # 1189 # 1746 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.529 1_18 - 71 DUF2116 PF09889.4 59 0.002 11.1 5.7 1 1 0.00073 0.087 5.9 5.7 6 35 14 54 12 60 0.75 # 18378 # 18590 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.601 4_3 - 388 FtsK_SpoIIIE PF01580.13 205 0.00012 14.8 0.0 1 1 1.9e-06 0.00023 13.8 0.0 41 59 155 173 129 184 0.85 # 1595 # 2758 # -1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_2 - 186 HTH_40 PF14493.1 91 0.00076 12.9 0.6 1 1 2.1e-05 0.0025 11.2 0.1 7 32 152 177 147 183 0.89 # 1189 # 1746 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.529 1_2 - 186 HTH_38 PF13936.1 44 7e-06 18.7 0.0 1 1 5.9e-08 7e-06 18.7 0.0 9 41 147 179 145 182 0.93 # 1189 # 1746 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.529 1_21 - 562 FAD_oxidored PF12831.2 428 7.1e-07 21.7 3.8 1 2 5.9e-09 7.1e-07 21.7 3.8 1 41 100 139 100 159 0.83 # 19272 # 20957 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_21 - 562 FAD_oxidored PF12831.2 428 7.1e-07 21.7 3.8 2 2 0.01 1.2 1.2 0.0 84 120 305 341 261 364 0.71 # 19272 # 20957 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 4_3 - 388 MobB PF03205.9 140 0.0006 12.7 0.0 1 1 1e-05 0.0012 11.7 0.0 4 25 156 177 154 190 0.85 # 1595 # 2758 # -1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_21 - 562 Pyr_redox_3 PF13738.1 203 1.7e-18 60.5 0.1 1 3 1.5e-06 0.00018 14.8 0.0 164 199 95 130 48 134 0.85 # 19272 # 20957 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_21 - 562 Pyr_redox_3 PF13738.1 203 1.7e-18 60.5 0.1 2 3 5.8e-09 6.9e-07 22.6 0.0 115 201 219 304 174 306 0.81 # 19272 # 20957 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_21 - 562 Pyr_redox_3 PF13738.1 203 1.7e-18 60.5 0.1 3 3 5.6e-08 6.7e-06 19.4 0.0 89 147 317 372 309 431 0.82 # 19272 # 20957 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_21 - 562 NAD_binding_7 PF13241.1 103 4.6e-06 20.0 1.2 1 2 1.9e-05 0.0022 11.4 0.2 9 38 100 129 96 164 0.90 # 19272 # 20957 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_21 - 562 NAD_binding_7 PF13241.1 103 4.6e-06 20.0 1.2 2 2 0.00049 0.058 6.9 0.1 8 45 271 314 264 382 0.66 # 19272 # 20957 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_2 - 220 HTH_8 PF02954.14 42 8.2e-06 18.5 1.5 1 2 0.037 1.5 1.7 0.1 1 12 117 128 117 128 0.88 # 3088 # 3747 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.595 5_2 - 220 HTH_8 PF02954.14 42 8.2e-06 18.5 1.5 2 2 1.9e-06 7.7e-05 15.4 0.1 11 37 159 185 150 185 0.93 # 3088 # 3747 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.595 1_45 - 83 HTH_8 PF02954.14 42 1.2e-05 18.0 0.1 1 1 5.4e-07 2.1e-05 17.2 0.1 18 36 14 32 13 33 0.92 # 36269 # 36517 # 1 # ID=1_45;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.566 1_9 - 187 HTH_8 PF02954.14 42 0.00012 14.7 0.2 1 2 0.07 2.8 0.8 0.1 2 12 114 124 113 124 0.85 # 10175 # 10735 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.579 1_9 - 187 HTH_8 PF02954.14 42 0.00012 14.7 0.2 2 2 4.8e-05 0.0019 10.9 0.0 20 37 163 180 159 183 0.86 # 10175 # 10735 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.579 1_27 - 226 TetR_N PF00440.18 47 4.2e-20 64.4 0.1 1 2 1.4e-20 8.2e-19 60.2 0.0 2 47 19 64 18 64 0.97 # 23044 # 23721 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_27 - 226 TetR_N PF00440.18 47 4.2e-20 64.4 0.1 2 2 0.025 1.5 1.8 0.1 1 16 179 194 179 196 0.91 # 23044 # 23721 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 5_2 - 220 TetR_N PF00440.18 47 4.2e-06 19.5 0.0 1 1 4.3e-07 2.6e-05 17.0 0.0 16 43 166 193 165 196 0.91 # 3088 # 3747 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.595 2_12 - 1017 AAA_19 PF13245.1 76 0.0006 12.7 0.0 1 1 1.6e-05 0.0019 11.1 0.0 14 31 492 508 481 518 0.90 # 8480 # 11530 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.471 1_17 - 255 rve PF00665.21 120 1.3e-13 44.3 0.0 1 2 0.041 2.4 1.5 0.0 83 102 30 49 7 51 0.90 # 17376 # 18140 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.610 1_17 - 255 rve PF00665.21 120 1.3e-13 44.3 0.0 2 2 3.4e-14 2e-12 40.5 0.0 8 117 73 179 69 182 0.90 # 17376 # 18140 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.610 7_1 - 235 rve PF00665.21 120 3.9e-13 42.7 0.1 1 2 0.03 1.8 1.9 0.0 78 102 27 49 6 54 0.84 # 53 # 757 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 7_1 - 235 rve PF00665.21 120 3.9e-13 42.7 0.1 2 2 1.2e-13 7.2e-12 38.7 0.0 9 119 75 182 70 183 0.89 # 53 # 757 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 4_3 - 388 AAA_23 PF13476.1 202 2.4e-06 21.2 0.1 1 1 4.2e-08 4.9e-06 20.1 0.0 19 44 152 177 140 226 0.87 # 1595 # 2758 # -1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_32 - 283 TIGR00573 TIGR00573 217 7e-13 41.4 0.0 1 1 2.6e-14 3.1e-12 39.3 0.0 12 181 107 274 103 282 0.77 # 28721 # 29569 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.630 4_9 - 122 CPSase_L_D3 PF02787.14 123 0.0009 12.2 0.1 1 1 1.1e-05 0.0013 11.7 0.1 50 96 45 91 21 103 0.79 # 6616 # 6981 # 1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.421 4_3 - 388 SMC_N PF02463.14 220 0.0014 11.0 0.0 1 1 2.1e-05 0.0025 10.2 0.0 26 50 154 178 147 195 0.81 # 1595 # 2758 # -1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 5_2 - 220 HTH_Tnp_1 PF01527.15 76 0.00014 15.0 0.0 1 1 7.2e-06 0.00028 14.0 0.0 18 44 162 187 151 199 0.86 # 3088 # 3747 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.595 1_9 - 187 HTH_Tnp_1 PF01527.15 76 0.00023 14.3 0.1 1 1 1.3e-05 0.00053 13.1 0.1 15 44 154 182 140 186 0.79 # 10175 # 10735 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.579 7_1 - 235 HTH_Tnp_1 PF01527.15 76 0.00029 13.9 0.3 1 1 1.6e-05 0.00064 12.9 0.3 4 51 6 58 4 63 0.79 # 53 # 757 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 3_9 - 696 TraG-D_C PF12696.2 128 0.00016 14.7 0.1 1 1 2.4e-06 0.00028 13.9 0.1 3 94 437 524 435 556 0.78 # 7112 # 9199 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.548 7_1 - 235 DDE_3 PF13358.1 146 0.00082 12.3 0.0 1 1 2.1e-05 0.0025 10.7 0.0 32 90 82 141 59 146 0.87 # 53 # 757 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_21 - 562 Thi4 PF01946.12 230 0.00032 13.0 0.4 1 1 6.3e-06 0.00075 11.7 0.4 19 70 100 150 95 158 0.88 # 19272 # 20957 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_45 - 83 HTH_37 PF13744.1 80 5.1e-05 16.2 0.0 1 1 8.8e-07 0.0001 15.2 0.0 24 54 7 37 4 46 0.89 # 36269 # 36517 # 1 # ID=1_45;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.566 1_28 - 400 TIGR01394 TIGR01394 594 0.0018 9.3 0.0 1 1 2.2e-05 0.0026 8.8 0.0 408 486 267 343 261 354 0.84 # 23800 # 24999 # 1 # ID=1_28;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.637 1_50 - 325 Hydantoinase_A PF01968.13 290 1.3e-07 24.1 3.6 1 2 5.2e-07 6.2e-05 15.3 0.1 67 96 158 186 140 193 0.83 # 38824 # 39798 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.557 1_50 - 325 Hydantoinase_A PF01968.13 290 1.3e-07 24.1 3.6 2 2 3.1e-05 0.0037 9.5 0.1 212 265 248 301 191 322 0.76 # 38824 # 39798 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.557 1_25 - 152 MerR_1 PF13411.1 69 4.1e-20 64.5 0.0 1 1 1.3e-21 7.4e-20 63.7 0.0 2 67 9 75 8 77 0.96 # 22177 # 22632 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.610 1_20 - 122 MerR_1 PF13411.1 69 6.1e-13 41.6 0.0 1 1 1.5e-14 8.9e-13 41.1 0.0 1 68 4 72 4 73 0.97 # 18889 # 19254 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.672 4_3 - 388 AAA_16 PF13191.1 185 0.001 12.2 0.0 1 1 1.8e-05 0.0021 11.2 0.0 26 50 154 178 140 211 0.85 # 1595 # 2758 # -1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 4_3 - 388 AAA_22 PF13401.1 131 3.4e-06 20.4 0.0 1 1 1.4e-07 8.5e-06 19.1 0.0 4 30 152 178 149 243 0.84 # 1595 # 2758 # -1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 2_12 - 1017 AAA_22 PF13401.1 131 0.0003 14.1 0.0 1 1 1.7e-05 0.001 12.4 0.0 8 70 492 558 486 594 0.69 # 8480 # 11530 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.471 1_62 - 287 Methyltransf_27 PF13708.1 194 2.1e-69 226.1 0.0 1 1 3.1e-71 3.7e-69 225.3 0.0 2 194 89 282 88 282 0.98 # 46194 # 47054 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.523 1_9 - 187 NUMOD1 PF07453.8 37 0.00064 12.8 0.0 1 1 1.1e-05 0.0013 11.8 0.0 19 37 164 182 164 182 0.94 # 10175 # 10735 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.579 4_3 - 388 AAA_29 PF13555.1 62 1.1e-05 18.1 0.1 1 1 2.2e-07 2.6e-05 16.9 0.1 26 43 155 172 147 175 0.84 # 1595 # 2758 # -1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_21 - 562 Pyr_redox PF00070.22 80 1.1e-19 63.8 5.4 1 2 1.2e-06 0.00015 15.4 1.5 2 31 101 130 100 132 0.95 # 19272 # 20957 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_21 - 562 Pyr_redox PF00070.22 80 1.1e-19 63.8 5.4 2 2 3.2e-17 3.8e-15 49.3 0.1 1 72 272 342 272 351 0.91 # 19272 # 20957 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_9 - 187 HTH_Tnp_IS630 PF01710.11 120 3.9e-05 16.5 0.0 1 1 1.3e-06 7.6e-05 15.6 0.0 10 42 157 185 151 186 0.86 # 10175 # 10735 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.579 1_2 - 186 HTH_Tnp_IS630 PF01710.11 120 0.00011 15.0 0.0 1 1 3.9e-06 0.00023 14.0 0.0 8 44 148 184 145 185 0.90 # 1189 # 1746 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.529 1_21 - 562 HI0933_like PF03486.9 409 5.2e-09 28.1 5.0 1 2 4.3e-07 5.1e-05 15.0 2.8 2 33 100 131 99 139 0.91 # 19272 # 20957 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_21 - 562 HI0933_like PF03486.9 409 5.2e-09 28.1 5.0 2 2 1.7e-06 0.0002 13.0 0.0 83 163 286 362 281 379 0.85 # 19272 # 20957 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 7_1 - 235 HTH_32 PF13565.1 77 1.5e-06 22.1 0.2 1 1 1.7e-07 6.7e-06 20.0 0.0 26 76 5 50 2 51 0.83 # 53 # 757 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_17 - 255 HTH_32 PF13565.1 77 0.00023 15.1 0.2 1 1 2e-05 0.00079 13.4 0.2 37 76 15 50 6 51 0.83 # 17376 # 18140 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.610 1_9 - 187 HTH_32 PF13565.1 77 0.00085 13.3 5.4 1 1 7.9e-05 0.0031 11.5 3.5 7 77 124 182 119 182 0.68 # 10175 # 10735 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.579 1_45 - 83 HTH_3 PF01381.17 55 2.2e-09 30.2 0.1 1 1 1.2e-10 3.7e-09 29.5 0.1 4 45 9 50 6 56 0.86 # 36269 # 36517 # 1 # ID=1_45;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.566 1_59 - 89 HTH_3 PF01381.17 55 1.3e-06 21.4 0.0 1 1 5.6e-08 1.7e-06 21.0 0.0 8 36 41 69 33 78 0.88 # 43721 # 43987 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.584 1_54 - 160 HTH_3 PF01381.17 55 0.00018 14.6 0.1 1 2 0.0029 0.086 5.9 0.0 2 20 15 33 14 37 0.91 # 41422 # 41901 # 1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 1_54 - 160 HTH_3 PF01381.17 55 0.00018 14.6 0.1 2 2 0.0022 0.065 6.3 0.0 1 23 96 118 96 120 0.89 # 41422 # 41901 # 1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 1_9 - 187 HTH_3 PF01381.17 55 0.0005 13.1 0.4 1 1 4.5e-05 0.0013 11.7 0.4 2 31 152 183 151 184 0.86 # 10175 # 10735 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.579 7_1 - 235 HTH_23 PF13384.1 50 7.2e-06 18.8 0.7 1 2 0.095 1.9 1.6 0.0 7 27 11 35 7 36 0.69 # 53 # 757 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 7_1 - 235 HTH_23 PF13384.1 50 7.2e-06 18.8 0.7 2 2 1.1e-05 0.00022 14.0 0.1 28 42 41 55 40 62 0.87 # 53 # 757 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_59 - 89 HTH_23 PF13384.1 50 8.3e-06 18.6 0.0 1 1 6.4e-07 1.3e-05 18.0 0.0 16 39 38 64 33 68 0.83 # 43721 # 43987 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.584 1_9 - 187 HTH_23 PF13384.1 50 2.7e-05 16.9 1.3 1 1 1.8e-06 3.5e-05 16.6 0.1 10 39 151 183 148 184 0.82 # 10175 # 10735 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.579 1_2 - 186 HTH_23 PF13384.1 50 5.2e-05 16.0 0.3 1 1 2.6e-06 5.2e-05 16.0 0.3 5 39 146 180 142 184 0.87 # 1189 # 1746 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.529 1_45 - 83 HTH_23 PF13384.1 50 5.3e-05 16.0 0.0 1 1 5.2e-06 0.0001 15.1 0.0 15 34 10 31 6 40 0.81 # 36269 # 36517 # 1 # ID=1_45;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.566 1_27 - 226 HTH_23 PF13384.1 50 0.0011 11.9 0.2 1 1 0.00029 0.0057 9.5 0.0 10 35 22 51 14 64 0.75 # 23044 # 23721 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_9 - 187 HTH_7 PF02796.10 45 1.4e-16 53.3 0.3 1 1 7.1e-18 2.8e-16 52.3 0.3 1 44 141 184 141 185 0.98 # 10175 # 10735 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.579 1_2 - 186 HTH_7 PF02796.10 45 2.2e-13 43.1 0.5 1 1 1.5e-14 6.1e-13 41.6 0.1 1 44 141 181 141 182 0.97 # 1189 # 1746 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.529 5_2 - 220 HTH_7 PF02796.10 45 2.7e-05 17.2 0.0 1 1 1.4e-06 5.5e-05 16.2 0.0 1 41 145 186 145 188 0.72 # 3088 # 3747 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.595 1_45 - 83 HTH_19 PF12844.2 64 4.7e-08 26.2 0.0 1 1 1.2e-09 6.9e-08 25.7 0.0 8 45 10 47 8 56 0.86 # 36269 # 36517 # 1 # ID=1_45;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.566 1_59 - 89 HTH_19 PF12844.2 64 0.0001 15.5 0.0 1 1 2.3e-06 0.00014 15.1 0.0 4 39 33 69 30 73 0.85 # 43721 # 43987 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.584 1_2 - 186 HTH_29 PF13551.1 112 0.00013 15.3 0.6 1 2 0.025 2.9 1.3 0.2 24 46 114 136 88 153 0.67 # 1189 # 1746 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.529 1_2 - 186 HTH_29 PF13551.1 112 0.00013 15.3 0.6 2 2 1e-05 0.0012 12.2 0.0 4 35 151 181 148 184 0.90 # 1189 # 1746 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.529 1_21 - 562 GIDA PF01134.17 392 3.1e-06 19.4 5.3 1 2 2.6e-08 3.1e-06 19.4 5.3 1 53 100 154 100 290 0.87 # 19272 # 20957 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_21 - 562 GIDA PF01134.17 392 3.1e-06 19.4 5.3 2 2 0.01 1.2 1.0 0.3 349 385 390 426 376 430 0.79 # 19272 # 20957 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_21 - 562 XdhC_C PF13478.1 136 0.00099 12.6 1.0 1 2 0.08 9.6 -0.3 0.1 1 29 101 129 101 163 0.86 # 19272 # 20957 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_21 - 562 XdhC_C PF13478.1 136 0.00099 12.6 1.0 2 2 6.9e-05 0.0082 9.6 0.1 1 66 273 351 273 371 0.64 # 19272 # 20957 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_21 - 562 NAD_binding_8 PF13450.1 68 8.2e-05 15.8 1.2 1 1 6.9e-07 8.2e-05 15.8 1.2 1 35 103 136 103 155 0.91 # 19272 # 20957 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 7_1 - 235 DDE_Tnp_IS66 PF03050.9 271 2.8e-12 39.5 0.3 1 1 6e-14 3.5e-12 39.2 0.3 5 132 10 144 6 174 0.87 # 53 # 757 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_17 - 255 DDE_Tnp_IS66 PF03050.9 271 1.3e-09 30.7 0.4 1 1 3.4e-11 2e-09 30.2 0.4 11 133 16 144 8 183 0.86 # 17376 # 18140 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.610 1_21 - 562 Trp_halogenase PF04820.9 454 0.0053 8.5 3.3 1 1 8.1e-05 0.0096 7.6 3.3 1 47 100 143 100 151 0.76 # 19272 # 20957 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 3_9 - 696 TrwB_AAD_bind PF10412.4 386 2.2e-06 19.6 0.9 1 3 1.7e-05 0.002 9.8 0.0 16 36 134 154 125 158 0.88 # 7112 # 9199 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.548 3_9 - 696 TrwB_AAD_bind PF10412.4 386 2.2e-06 19.6 0.9 2 3 9.3e-05 0.011 7.4 0.1 93 140 235 281 229 303 0.80 # 7112 # 9199 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.548 3_9 - 696 TrwB_AAD_bind PF10412.4 386 2.2e-06 19.6 0.9 3 3 0.083 9.8 -2.3 0.0 293 323 482 512 405 546 0.58 # 7112 # 9199 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.548 2_12 - 1017 AAA_18 PF13238.1 129 9.7e-05 15.9 1.2 1 1 3.7e-06 0.00044 13.7 0.0 2 19 492 509 492 568 0.77 # 8480 # 11530 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.471 3_2 - 282 IMS_HHH PF11798.3 32 0.00014 15.1 0.1 1 1 3.3e-06 0.00039 13.7 0.1 14 32 194 212 183 212 0.85 # 1834 # 2679 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.598 1_9 - 187 HTH_psq PF05225.11 45 0.00015 14.5 0.0 1 1 2.5e-06 0.0003 13.5 0.0 21 39 166 184 165 186 0.91 # 10175 # 10735 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.579 1_32 - 283 TIGR01406 TIGR01406 231 1e-13 44.3 0.0 1 1 1.7e-15 2e-13 43.3 0.0 4 128 106 223 104 281 0.73 # 28721 # 29569 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.630 4_3 - 388 DUF87 PF01935.12 229 0.00011 15.2 0.0 1 1 1.8e-06 0.00022 14.2 0.0 28 45 157 174 155 188 0.89 # 1595 # 2758 # -1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_9 - 187 HTH_28 PF13518.1 52 5.7e-05 16.3 0.1 1 1 2.4e-06 5.7e-05 16.3 0.1 9 34 158 183 147 184 0.84 # 10175 # 10735 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.579 7_1 - 235 HTH_28 PF13518.1 52 6.9e-05 16.0 1.2 1 1 1.3e-05 0.0003 14.0 1.2 22 36 40 54 13 55 0.76 # 53 # 757 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_59 - 89 HTH_28 PF13518.1 52 7.4e-05 15.9 0.0 1 1 4.3e-06 0.0001 15.4 0.0 7 34 34 64 33 68 0.82 # 43721 # 43987 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.584 1_2 - 186 HTH_28 PF13518.1 52 0.00016 14.9 0.0 1 1 2.1e-05 0.00051 13.2 0.0 8 33 154 179 148 184 0.82 # 1189 # 1746 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.529 1_45 - 83 HTH_28 PF13518.1 52 0.0005 13.3 0.1 1 1 4.5e-05 0.0011 12.2 0.1 8 29 8 31 6 35 0.78 # 36269 # 36517 # 1 # ID=1_45;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.566 1_27 - 226 HTH_Tnp_1_2 PF13022.1 142 0.00094 12.1 0.0 1 1 1.2e-05 0.0014 11.6 0.0 22 77 24 73 5 79 0.76 # 23044 # 23721 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_25 - 152 MerR-DNA-bind PF09278.6 65 4e-21 68.4 1.4 1 1 1.2e-22 7.2e-21 67.6 1.1 1 65 51 113 51 113 0.95 # 22177 # 22632 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.610 1_20 - 122 MerR-DNA-bind PF09278.6 65 0.00022 14.8 6.6 1 1 6.7e-06 0.0004 14.0 6.6 1 64 47 108 47 109 0.80 # 18889 # 19254 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.672 1_32 - 283 TIGR01298 TIGR01298 200 4.3e-05 16.2 1.0 1 1 2.2e-06 0.00026 13.6 1.0 105 189 179 267 92 274 0.71 # 28721 # 29569 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.630 1_9 - 187 HTH_10 PF04967.7 53 1.4e-05 17.8 0.2 1 2 0.055 6.5 -0.3 0.1 3 18 124 139 123 154 0.71 # 10175 # 10735 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.579 1_9 - 187 HTH_10 PF04967.7 53 1.4e-05 17.8 0.2 2 2 8.6e-07 0.0001 15.0 0.0 27 45 165 183 162 185 0.93 # 10175 # 10735 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.579 1_21 - 562 TIGR01292 TIGR01292 300 1.5e-19 62.7 3.5 1 2 4.9e-06 0.00059 11.5 1.2 2 39 100 137 99 143 0.91 # 19272 # 20957 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_21 - 562 TIGR01292 TIGR01292 300 1.5e-19 62.7 3.5 2 2 3.9e-18 4.7e-16 51.2 0.0 143 296 272 425 214 427 0.82 # 19272 # 20957 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 4_3 - 388 Miro PF08477.8 119 0.0011 12.6 0.0 1 1 2.1e-05 0.0025 11.5 0.0 4 28 157 186 156 220 0.72 # 1595 # 2758 # -1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_45 - 83 HTH_31 PF13560.1 64 2.3e-09 30.6 0.9 1 1 7.4e-11 2.9e-09 30.2 0.9 9 56 9 55 6 72 0.90 # 36269 # 36517 # 1 # ID=1_45;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.566 1_54 - 160 HTH_31 PF13560.1 64 8e-07 22.4 1.2 1 2 0.0035 0.14 5.6 0.0 6 33 14 41 12 48 0.88 # 41422 # 41901 # 1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 1_54 - 160 HTH_31 PF13560.1 64 8e-07 22.4 1.2 2 2 2.8e-06 0.00011 15.6 0.3 4 39 94 129 91 135 0.88 # 41422 # 41901 # 1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 1_59 - 89 HTH_31 PF13560.1 64 2.4e-06 20.9 0.0 1 1 8.4e-08 3.3e-06 20.4 0.0 2 42 29 69 28 80 0.84 # 43721 # 43987 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.584 2_12 - 1017 DUF2075 PF09848.4 352 0.00042 12.5 0.0 1 1 1.1e-05 0.0013 10.8 0.0 5 22 492 509 489 533 0.86 # 8480 # 11530 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.471 4_3 - 388 T2SE PF00437.15 272 3.4e-23 75.0 0.0 1 1 4.6e-25 5.5e-23 74.3 0.0 11 269 24 303 15 306 0.78 # 1595 # 2758 # -1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_50 - 325 StbA PF06406.6 318 3.9e-157 515.2 0.2 1 1 3.7e-159 4.4e-157 515.1 0.2 1 318 1 322 1 322 0.99 # 38824 # 39798 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.557 4_3 - 388 NACHT PF05729.7 166 0.0004 13.2 0.0 1 1 6.6e-06 0.00079 12.3 0.0 4 29 156 181 154 188 0.83 # 1595 # 2758 # -1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 2_12 - 1017 AAA_17 PF13207.1 121 5.4e-05 17.2 0.1 1 1 3.9e-06 0.00046 14.2 0.0 3 27 492 522 492 582 0.70 # 8480 # 11530 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.471 1_21 - 562 FAD_binding_2 PF00890.19 417 1.1e-06 20.8 5.3 1 3 9.5e-09 1.1e-06 20.8 5.3 2 32 101 131 100 138 0.91 # 19272 # 20957 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_21 - 562 FAD_binding_2 PF00890.19 417 1.1e-06 20.8 5.3 2 3 0.034 4 -0.8 0.2 142 204 311 366 286 382 0.67 # 19272 # 20957 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_21 - 562 FAD_binding_2 PF00890.19 417 1.1e-06 20.8 5.3 3 3 0.0019 0.22 3.4 0.1 373 402 374 405 368 419 0.86 # 19272 # 20957 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 4_3 - 388 AAA_25 PF13481.1 194 6.9e-06 18.7 0.0 1 1 1.3e-07 1.6e-05 17.6 0.0 24 53 143 172 120 178 0.86 # 1595 # 2758 # -1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_68 - 147 RepA_N PF06970.6 76 0.001 12.1 0.0 1 1 1.7e-05 0.002 11.1 0.0 15 44 56 85 54 90 0.92 # 49507 # 49947 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 1_50 - 325 Hydant_A_N PF05378.8 176 0.0012 11.5 3.9 1 4 0.08 9.5 -1.2 0.0 1 19 2 20 2 48 0.82 # 38824 # 39798 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.557 1_50 - 325 Hydant_A_N PF05378.8 176 0.0012 11.5 3.9 2 4 0.049 5.9 -0.5 0.0 108 154 38 86 15 103 0.67 # 38824 # 39798 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.557 1_50 - 325 Hydant_A_N PF05378.8 176 0.0012 11.5 3.9 3 4 0.057 6.8 -0.7 0.0 95 129 113 147 89 153 0.76 # 38824 # 39798 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.557 1_50 - 325 Hydant_A_N PF05378.8 176 0.0012 11.5 3.9 4 4 3.6e-05 0.0043 9.7 0.2 2 51 170 217 169 226 0.82 # 38824 # 39798 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.557 1_59 - 89 HTH_Tnp_ISL3 PF13542.1 52 0.00044 12.6 0.0 1 1 5e-06 0.00059 12.2 0.0 19 49 35 64 33 65 0.91 # 43721 # 43987 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.584 1_25 - 152 MerR PF00376.18 38 1.2e-14 46.8 0.1 1 1 4e-16 2.4e-14 45.9 0.1 1 38 9 46 9 46 0.99 # 22177 # 22632 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.610 1_20 - 122 MerR PF00376.18 38 4.3e-07 22.6 0.1 1 1 1.1e-08 6.6e-07 22.0 0.1 2 38 6 42 5 42 0.89 # 18889 # 19254 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.672 1_9 - 187 CENP-B_N PF04218.8 53 3.4e-06 19.6 0.0 1 1 1.1e-07 6.4e-06 18.7 0.0 17 43 156 182 152 186 0.92 # 10175 # 10735 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.579 1_59 - 89 CENP-B_N PF04218.8 53 0.0017 11.0 0.0 1 1 3.8e-05 0.0023 10.6 0.0 24 49 44 69 34 72 0.88 # 43721 # 43987 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.584 4_3 - 388 Ribosomal_S5 PF00333.15 67 3.6e-05 16.7 0.1 1 2 0.00091 0.11 5.5 0.0 26 45 84 103 76 114 0.83 # 1595 # 2758 # -1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 4_3 - 388 Ribosomal_S5 PF00333.15 67 3.6e-05 16.7 0.1 2 2 0.00012 0.014 8.4 0.0 21 54 242 274 230 278 0.91 # 1595 # 2758 # -1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 4_3 - 388 RNA_helicase PF00910.17 107 0.0013 12.1 0.0 1 1 2.5e-05 0.0029 10.9 0.0 3 26 157 180 156 197 0.81 # 1595 # 2758 # -1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_21 - 562 AlaDh_PNT_C PF01262.16 168 1e-06 21.6 2.3 1 2 3.9e-06 0.00047 12.9 0.3 16 50 94 128 80 131 0.87 # 19272 # 20957 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_21 - 562 AlaDh_PNT_C PF01262.16 168 1e-06 21.6 2.3 2 2 0.00012 0.014 8.1 0.1 19 60 269 310 260 341 0.84 # 19272 # 20957 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_4 - 131 DDE_Tnp_IS1 PF03400.8 131 2.2e-73 237.7 0.6 1 1 2.2e-75 2.6e-73 237.4 0.6 7 126 1 120 1 124 0.99 # 4911 # 5303 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.552 1_21 - 562 3HCDH_N PF02737.13 180 0.019 7.7 6.6 1 2 0.0086 1 2.1 2.8 1 30 100 129 100 133 0.93 # 19272 # 20957 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_21 - 562 3HCDH_N PF02737.13 180 0.019 7.7 6.6 2 2 0.0003 0.036 6.9 0.1 2 36 273 307 272 359 0.75 # 19272 # 20957 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_59 - 89 Phage_CII PF05269.6 91 0.00086 12.5 0.0 1 1 9.2e-06 0.0011 12.2 0.0 17 45 36 64 32 81 0.83 # 43721 # 43987 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.584 1_21 - 562 Glyco_transf_4 PF13439.1 177 0.00018 14.4 0.5 1 1 2.7e-06 0.00032 13.6 0.1 13 39 277 303 274 335 0.84 # 19272 # 20957 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 4_3 - 388 ATP_bind_1 PF03029.12 238 0.00097 11.8 0.0 1 1 1.3e-05 0.0016 11.2 0.0 1 25 157 181 157 191 0.84 # 1595 # 2758 # -1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_17 - 255 DDE_Tnp_IS240 PF13610.1 140 1.2e-53 174.0 0.0 1 1 3.9e-55 1.6e-53 173.6 0.0 3 139 73 211 71 212 0.98 # 17376 # 18140 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.610 7_1 - 235 DDE_Tnp_IS240 PF13610.1 140 9e-53 171.2 0.0 1 1 3.2e-54 1.3e-52 170.7 0.0 4 139 75 212 73 213 0.99 # 53 # 757 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 2_3 - 66 DDE_Tnp_IS240 PF13610.1 140 0.00031 13.9 0.0 1 1 8.4e-06 0.00033 13.8 0.0 29 64 18 52 5 58 0.83 # 2371 # 2568 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.449 5_2 - 220 HTH_26 PF13443.1 63 1.8e-05 18.1 0.0 1 1 7e-07 4.2e-05 16.9 0.0 5 31 161 187 157 193 0.93 # 3088 # 3747 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.595 1_59 - 89 HTH_26 PF13443.1 63 0.00032 14.1 0.0 1 1 7.2e-06 0.00043 13.7 0.0 11 47 43 78 33 82 0.90 # 43721 # 43987 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.584 5_2 - 220 HTH_17 PF12728.2 51 0.00018 14.9 0.6 1 1 7.1e-06 0.00085 12.8 0.0 3 31 168 197 168 205 0.80 # 3088 # 3747 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.595 1_9 - 187 HTH_11 PF08279.7 55 0.00014 14.6 0.1 1 1 2.5e-05 0.0015 11.4 0.0 20 37 166 183 162 184 0.91 # 10175 # 10735 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.579 5_2 - 220 HTH_11 PF08279.7 55 0.00045 13.1 0.1 1 1 4.9e-05 0.0029 10.4 0.0 12 36 163 187 156 188 0.86 # 3088 # 3747 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.595 1_2 - 186 TrmB PF01978.14 68 6.8e-05 15.7 0.0 1 1 1.1e-06 0.00014 14.8 0.0 19 44 155 180 150 181 0.89 # 1189 # 1746 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.529 1_21 - 562 Pyr_redox_2 PF07992.9 201 8.4e-43 139.7 0.0 1 1 1.6e-44 1.9e-42 138.6 0.0 1 199 100 407 100 409 0.96 # 19272 # 20957 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_59 - 89 HTH_Crp_2 PF13545.1 76 0.00054 12.9 0.0 1 1 6.6e-06 0.00079 12.4 0.0 26 50 40 64 32 65 0.88 # 43721 # 43987 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.584 1_21 - 562 DAO PF01266.19 358 7.9e-12 37.8 7.5 1 2 1.9e-08 2.2e-06 19.9 1.5 2 35 101 134 100 161 0.85 # 19272 # 20957 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_21 - 562 DAO PF01266.19 358 7.9e-12 37.8 7.5 2 2 7.7e-09 9.1e-07 21.1 0.5 151 239 314 400 274 529 0.80 # 19272 # 20957 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 3_1 - 292 Seryl_tRNA_N PF02403.17 108 0.011 9.0 13.5 1 4 0.02 2.4 1.4 0.1 57 104 11 59 2 63 0.69 # 770 # 1645 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.501 3_1 - 292 Seryl_tRNA_N PF02403.17 108 0.011 9.0 13.5 2 4 0.0053 0.63 3.3 0.8 39 96 39 107 17 111 0.52 # 770 # 1645 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.501 3_1 - 292 Seryl_tRNA_N PF02403.17 108 0.011 9.0 13.5 3 4 0.00048 0.058 6.6 0.1 27 59 90 122 75 144 0.84 # 770 # 1645 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.501 3_1 - 292 Seryl_tRNA_N PF02403.17 108 0.011 9.0 13.5 4 4 0.00026 0.031 7.5 1.6 17 107 162 251 155 252 0.76 # 770 # 1645 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.501 1_32 - 283 RNase_T PF00929.19 164 5.2e-22 72.0 0.0 1 1 5.6e-24 6.6e-22 71.7 0.0 1 163 105 262 105 263 0.94 # 28721 # 29569 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.630 2_12 - 1017 AAA_10 PF12846.2 304 1e-40 133.1 0.0 1 1 5.5e-42 2.2e-40 132.1 0.0 5 297 492 884 489 889 0.91 # 8480 # 11530 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.471 3_9 - 696 AAA_10 PF12846.2 304 7.5e-10 31.8 0.0 1 1 2.8e-11 1.1e-09 31.2 0.0 2 292 134 503 133 514 0.76 # 7112 # 9199 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.548 4_3 - 388 AAA_10 PF12846.2 304 1.7e-06 20.8 0.0 1 1 2.5e-07 9.8e-06 18.3 0.0 3 27 154 178 152 196 0.74 # 1595 # 2758 # -1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_2 - 186 HTH_20 PF12840.2 61 5.1e-06 19.4 0.1 1 2 0.016 0.96 2.5 0.0 33 52 8 27 6 28 0.90 # 1189 # 1746 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.529 1_2 - 186 HTH_20 PF12840.2 61 5.1e-06 19.4 0.1 2 2 1.8e-05 0.0011 12.0 0.1 3 43 110 177 108 180 0.91 # 1189 # 1746 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.529 1_27 - 226 HTH_20 PF12840.2 61 0.00029 13.8 0.1 1 1 3.6e-05 0.0021 11.0 0.0 21 46 30 55 18 63 0.85 # 23044 # 23721 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 3_1 - 292 AAA_13 PF13166.1 712 0.001 10.7 18.3 1 2 2.1e-05 0.0025 9.4 3.4 365 471 17 125 5 133 0.60 # 770 # 1645 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.501 3_1 - 292 AAA_13 PF13166.1 712 0.001 10.7 18.3 2 2 0.0001 0.012 7.1 7.2 322 439 158 285 138 291 0.75 # 770 # 1645 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.501 1_15 - 280 Pterin_bind PF00809.17 210 3e-58 189.7 0.0 1 1 3e-60 3.6e-58 189.5 0.0 1 210 7 216 7 216 0.98 # 15402 # 16241 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.617 1_71 - 145 SSB PF00436.20 104 3.9e-32 103.4 0.2 1 1 3.8e-34 4.5e-32 103.2 0.2 2 103 7 111 6 112 0.96 # 50723 # 51157 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.487 4_3 - 388 GTP_EFTU PF00009.22 188 0.0013 11.4 0.0 1 1 2e-05 0.0023 10.5 0.0 8 34 157 183 155 195 0.87 # 1595 # 2758 # -1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/5d0a86ad-3b8c-43b3-8f69-b116c7777a0e # Target file: checkm_output/bins/pm708/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm708/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/5d0a86ad-3b8c-43b3-8f69-b116c7777a0e checkm_output/bins/pm708/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:12:51 2017 # [ok]