# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_1 - 102 HTH_IclR PF09339.5 52 4.6e-07 16.9 0.7 1 1 4.2e-07 8.3e-07 16.1 0.7 19 40 4 25 1 26 0.90 # 2 # 307 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.484 1_1 - 102 MerR_1 PF13411.1 69 1.1e-05 12.6 0.1 1 1 1.1e-05 2.1e-05 11.7 0.0 2 30 5 33 4 48 0.87 # 2 # 307 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.484 1_1 - 102 HTH_23 PF13384.1 50 2.7e-06 14.5 0.2 1 1 2.8e-06 5.6e-06 13.5 0.2 18 39 4 25 1 26 0.90 # 2 # 307 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.484 1_1 - 102 HTH_28 PF13518.1 52 1e-05 13.0 0.1 1 1 1e-05 2e-05 12.0 0.1 13 35 4 26 2 29 0.92 # 2 # 307 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.484 1_1 - 102 HTH_24 PF13412.1 48 1.5e-05 11.9 0.4 1 1 1.4e-05 2.9e-05 10.9 0.4 16 39 2 25 2 26 0.94 # 2 # 307 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.484 1_1 - 102 MerR PF00376.18 38 1.7e-06 15.0 0.1 1 1 2.3e-06 4.6e-06 13.7 0.1 1 23 5 27 5 35 0.92 # 2 # 307 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.484 1_1 - 102 HTH_17 PF12728.2 51 6.6e-10 26.6 0.0 1 1 5.4e-10 1.1e-09 26.0 0.0 3 44 5 47 4 50 0.80 # 2 # 307 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.484 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/a013ba45-1e3e-46d6-a2ff-ff959ad1ea24 # Target file: checkm_output/bins/pm705/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm705/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/a013ba45-1e3e-46d6-a2ff-ff959ad1ea24 checkm_output/bins/pm705/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:12:42 2017 # [ok]