# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_4 - 218 rve_3 PF13683.1 67 1.9e-14 44.4 0.1 1 1 1.1e-15 3.7e-14 43.5 0.1 3 67 134 199 132 199 0.95 # 2818 # 3471 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.547 1_7 - 1912 FtsK_SpoIIIE PF01580.13 205 5.9e-07 20.5 0.0 1 2 8.8e-08 3e-06 18.2 0.0 25 88 427 486 406 492 0.78 # 7169 # 12904 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.443 1_7 - 1912 FtsK_SpoIIIE PF01580.13 205 5.9e-07 20.5 0.0 2 2 0.079 2.7 -1.3 0.0 86 114 1867 1893 1865 1900 0.90 # 7169 # 12904 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.443 1_9 - 202 HTH_38 PF13936.1 44 1.7e-08 25.4 1.0 1 1 1.7e-09 5.9e-08 23.6 0.0 15 44 168 197 160 197 0.93 # 16358 # 16963 # 1 # ID=1_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_33 - 209 MobB PF03205.9 140 2e-05 15.7 0.1 1 1 1.6e-06 5.5e-05 14.3 0.0 10 42 11 41 1 46 0.79 # 33962 # 34588 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.453 1_7 - 1912 UvrD-helicase PF00580.16 315 3.6e-10 30.9 1.0 1 2 2.3e-09 7.9e-08 23.2 0.2 12 169 439 613 427 761 0.76 # 7169 # 12904 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.443 1_7 - 1912 UvrD-helicase PF00580.16 315 3.6e-10 30.9 1.0 2 2 0.00038 0.013 6.1 0.1 179 294 1283 1415 1083 1416 0.73 # 7169 # 12904 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.443 1_7 - 1912 AAA_19 PF13245.1 76 7.2e-16 49.2 0.4 1 2 2.6e-15 4.4e-14 43.5 0.1 2 63 433 492 432 508 0.84 # 7169 # 12904 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.443 1_7 - 1912 AAA_19 PF13245.1 76 7.2e-16 49.2 0.4 2 2 0.01 0.18 3.1 0.0 26 62 1516 1550 1513 1567 0.78 # 7169 # 12904 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.443 1_33 - 209 AAA_19 PF13245.1 76 0.00019 12.6 0.1 1 2 0.00019 0.0033 8.6 0.0 20 48 11 35 9 44 0.84 # 33962 # 34588 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.453 1_33 - 209 AAA_19 PF13245.1 76 0.00019 12.6 0.1 2 2 0.044 0.76 1.1 0.0 42 62 135 155 118 180 0.75 # 33962 # 34588 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.453 1_33 - 209 CbiA PF01656.18 195 8.2e-23 72.2 0.0 1 1 4.7e-24 1.6e-22 71.2 0.0 1 154 3 137 3 178 0.78 # 33962 # 34588 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.453 1_9 - 202 Sigma70_r4_2 PF08281.7 54 4.4e-07 20.8 0.0 1 1 4e-08 1.4e-06 19.2 0.0 17 44 165 191 165 199 0.86 # 16358 # 16963 # 1 # ID=1_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_4 - 218 rve PF00665.21 120 1.6e-30 97.1 0.1 1 1 6.5e-32 2.2e-30 96.7 0.1 2 120 45 161 44 161 0.96 # 2818 # 3471 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.547 1_33 - 209 YhjQ PF06564.7 244 7.9e-06 16.7 0.3 1 2 1.8e-06 6.1e-05 13.8 0.3 4 38 3 37 1 50 0.89 # 33962 # 34588 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.453 1_33 - 209 YhjQ PF06564.7 244 7.9e-06 16.7 0.3 2 2 0.029 1 0.0 0.0 108 144 69 103 44 113 0.78 # 33962 # 34588 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.453 1_7 - 1912 AAA_30 PF13604.1 196 5.4e-12 37.0 0.1 1 2 1.4e-08 4.7e-07 20.9 0.1 4 104 428 524 425 539 0.78 # 7169 # 12904 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.443 1_7 - 1912 AAA_30 PF13604.1 196 5.4e-12 37.0 0.1 2 2 2.8e-06 9.4e-05 13.4 0.0 95 135 1382 1418 1368 1421 0.85 # 7169 # 12904 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.443 1_9 - 202 GerE PF00196.14 58 1e-05 16.3 0.0 1 1 5.1e-07 1.7e-05 15.5 0.0 11 35 166 190 165 201 0.88 # 16358 # 16963 # 1 # ID=1_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_33 - 209 MipZ PF09140.6 261 5.8e-22 69.3 0.5 1 2 1.2e-12 4e-11 33.8 0.0 2 53 2 52 1 60 0.89 # 33962 # 34588 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.453 1_33 - 209 MipZ PF09140.6 261 5.8e-22 69.3 0.5 2 2 1.6e-12 5.4e-11 33.4 0.0 87 140 65 118 58 128 0.92 # 33962 # 34588 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.453 1_29 - 339 DivIC PF04977.10 80 0.0033 8.4 3.9 1 2 0.0006 0.021 5.8 0.0 17 56 189 228 180 229 0.84 # 31199 # 32215 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.551 1_29 - 339 DivIC PF04977.10 80 0.0033 8.4 3.9 2 2 0.0033 0.11 3.5 0.1 14 38 281 305 272 307 0.74 # 31199 # 32215 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.551 1_7 - 1912 AAA_12 PF13087.1 200 2e-14 44.8 0.1 1 1 2.6e-15 9e-14 42.6 0.1 20 198 1456 1637 1450 1639 0.82 # 7169 # 12904 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.443 1_2 - 400 zf-C4_Topoisom PF01396.14 39 0.004 8.1 9.2 1 3 0.0002 0.0069 7.4 0.3 22 36 53 66 43 69 0.86 # 1059 # 2258 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.562 1_2 - 400 zf-C4_Topoisom PF01396.14 39 0.004 8.1 9.2 2 3 0.0041 0.14 3.2 0.5 2 10 73 81 72 82 0.83 # 1059 # 2258 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.562 1_2 - 400 zf-C4_Topoisom PF01396.14 39 0.004 8.1 9.2 3 3 0.022 0.74 0.9 0.2 3 15 362 374 361 379 0.86 # 1059 # 2258 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.562 1_21 - 192 HTH_27 PF13463.1 68 0.00015 13.6 0.1 1 2 0.00021 0.0071 8.1 0.0 4 68 13 85 11 85 0.69 # 26531 # 27106 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.674 1_21 - 192 HTH_27 PF13463.1 68 0.00015 13.6 0.1 2 2 0.0098 0.33 2.8 0.0 57 68 144 155 140 155 0.90 # 26531 # 27106 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.674 1_33 - 209 TIGR00064 TIGR00064 279 8.1e-05 13.0 0.5 1 2 0.00073 0.025 4.8 0.1 89 116 11 38 1 45 0.88 # 33962 # 34588 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.453 1_33 - 209 TIGR00064 TIGR00064 279 8.1e-05 13.0 0.5 2 2 0.00024 0.0083 6.4 0.0 153 175 68 90 60 99 0.82 # 33962 # 34588 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.453 1_4 - 218 rve_2 PF13333.1 52 4.2e-09 27.8 0.1 1 1 2.7e-10 9.3e-09 26.7 0.0 1 49 151 204 151 206 0.86 # 2818 # 3471 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.547 1_7 - 1912 AAA_16 PF13191.1 185 1.9e-05 16.1 1.0 1 1 2.6e-06 8.8e-05 13.9 0.2 21 120 437 539 428 607 0.65 # 7169 # 12904 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.443 1_7 - 1912 AAA_22 PF13401.1 131 1.1e-05 16.9 0.5 1 2 6e-06 0.0002 12.9 0.2 6 131 442 576 436 576 0.76 # 7169 # 12904 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.443 1_7 - 1912 AAA_22 PF13401.1 131 1.1e-05 16.9 0.5 2 2 0.089 3 -0.6 0.0 37 88 1829 1879 1805 1897 0.74 # 7169 # 12904 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.443 1_33 - 209 SRP54 PF00448.17 196 8.6e-08 23.2 0.1 1 1 1.5e-08 5.1e-07 20.7 0.1 4 98 2 91 1 134 0.80 # 33962 # 34588 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.453 1_9 - 202 HTH_23 PF13384.1 50 4.1e-08 24.2 0.2 1 1 2.4e-09 4.1e-08 24.2 0.2 10 42 166 198 160 201 0.92 # 16358 # 16963 # 1 # ID=1_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_24 - 230 HTH_23 PF13384.1 50 5.7e-05 14.2 0.0 1 1 7e-06 0.00012 13.2 0.0 2 38 82 125 81 128 0.87 # 28521 # 29210 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.467 1_33 - 209 Fer4_NifH PF00142.13 273 2.5e-05 14.9 0.0 1 1 2.3e-06 7.8e-05 13.3 0.0 8 38 9 39 2 46 0.89 # 33962 # 34588 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.453 1_9 - 202 HTH_7 PF02796.10 45 5.1e-06 17.7 0.0 1 1 4.4e-07 1.5e-05 16.3 0.0 13 38 165 190 156 190 0.93 # 16358 # 16963 # 1 # ID=1_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_9 - 202 HTH_29 PF13551.1 112 1.4e-05 16.6 0.5 1 2 0.0071 0.24 3.0 0.0 51 88 43 87 25 101 0.62 # 16358 # 16963 # 1 # ID=1_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_9 - 202 HTH_29 PF13551.1 112 1.4e-05 16.6 0.5 2 2 1.9e-05 0.00065 11.3 0.2 4 36 166 197 165 200 0.89 # 16358 # 16963 # 1 # ID=1_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_7 - 1912 ResIII PF04851.10 184 1.9e-05 15.9 0.0 1 1 3.2e-06 0.00011 13.5 0.0 25 80 440 498 425 562 0.70 # 7169 # 12904 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.443 1_33 - 209 TIGR01968 TIGR01968 261 6.4e-12 36.4 1.0 1 2 6.4e-11 2.2e-09 28.1 0.5 3 39 2 38 1 42 0.97 # 33962 # 34588 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.453 1_33 - 209 TIGR01968 TIGR01968 261 6.4e-12 36.4 1.0 2 2 0.00017 0.0057 7.0 0.0 100 135 65 100 60 158 0.83 # 33962 # 34588 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.453 1_9 - 202 HTH_28 PF13518.1 52 8.7e-09 26.7 0.4 1 1 6.1e-10 2.1e-08 25.5 0.4 4 38 165 199 165 201 0.92 # 16358 # 16963 # 1 # ID=1_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_9 - 202 HTH_24 PF13412.1 48 8.2e-06 16.6 0.0 1 1 5.2e-07 1.8e-05 15.6 0.0 16 40 172 196 168 196 0.89 # 16358 # 16963 # 1 # ID=1_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_9 - 202 HTH_10 PF04967.7 53 0.00015 12.8 0.0 1 1 1.3e-05 0.00044 11.3 0.0 27 46 177 196 173 199 0.86 # 16358 # 16963 # 1 # ID=1_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_9 - 202 HTH_31 PF13560.1 64 0.00081 11.0 4.3 1 2 0.023 0.78 1.5 0.1 15 38 23 56 16 77 0.73 # 16358 # 16963 # 1 # ID=1_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_9 - 202 HTH_31 PF13560.1 64 0.00081 11.0 4.3 2 2 4.9e-05 0.0017 10.0 0.5 11 39 170 198 142 201 0.90 # 16358 # 16963 # 1 # ID=1_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_33 - 209 AAA_17 PF13207.1 121 7.4e-06 18.2 0.0 1 1 4.2e-07 1.4e-05 17.3 0.0 9 77 11 84 9 205 0.76 # 33962 # 34588 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.453 1_7 - 1912 AAA_25 PF13481.1 194 1.5e-05 15.8 0.0 1 1 2.4e-06 4.1e-05 14.4 0.0 31 98 438 504 424 548 0.66 # 7169 # 12904 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.443 1_33 - 209 AAA_25 PF13481.1 194 4.5e-05 14.3 0.1 1 1 6.2e-06 0.00011 13.1 0.0 42 87 10 44 3 90 0.78 # 33962 # 34588 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.453 1_27 - 132 Zot PF05707.7 193 8.9e-05 13.4 0.0 1 1 4.7e-06 0.00016 12.5 0.0 98 127 5 35 1 46 0.82 # 30457 # 30852 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.548 1_7 - 1912 Viral_helicase1 PF01443.13 234 5.1e-07 20.8 0.0 1 2 2.5e-05 0.00086 10.2 0.0 2 70 444 513 443 520 0.60 # 7169 # 12904 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.443 1_7 - 1912 Viral_helicase1 PF01443.13 234 5.1e-07 20.8 0.0 2 2 0.00018 0.006 7.4 0.0 61 103 1379 1419 1346 1425 0.86 # 7169 # 12904 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.443 1_33 - 209 VirC1 PF07015.6 231 9.3e-10 29.3 0.0 1 1 5.9e-11 2e-09 28.2 0.0 3 172 2 164 1 206 0.75 # 33962 # 34588 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.453 1_16 - 335 Transposase_20 PF02371.11 87 3.7e-25 79.3 0.2 1 1 2.3e-26 7.9e-25 78.3 0.2 2 78 210 286 209 296 0.94 # 23954 # 24958 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.482 1_9 - 202 HTH_Tnp_ISL3 PF13542.1 52 1.4e-05 15.7 0.2 1 1 1e-06 3.4e-05 14.4 0.2 29 51 175 197 166 198 0.85 # 16358 # 16963 # 1 # ID=1_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_7 - 1912 AAA_33 PF13671.1 143 0.00014 13.2 0.5 1 1 3.4e-05 0.0011 10.2 0.5 3 95 444 604 443 622 0.55 # 7169 # 12904 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.443 1_9 - 202 CENP-B_N PF04218.8 53 5.3e-05 14.0 0.0 1 1 3.9e-06 0.00013 12.8 0.0 21 45 172 196 165 199 0.87 # 16358 # 16963 # 1 # ID=1_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_7 - 1912 ArgK PF03308.11 267 0.00012 12.3 0.0 1 1 8.9e-06 0.0003 10.9 0.0 27 64 438 475 425 478 0.87 # 7169 # 12904 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.443 1_21 - 192 PaaX PF07848.7 70 0.0001 13.7 0.1 1 1 8.5e-06 0.00029 12.3 0.0 37 60 51 74 17 85 0.69 # 26531 # 27106 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.674 1_29 - 339 Med9 PF07544.8 83 0.00033 11.8 3.9 1 2 0.00011 0.0039 8.4 0.3 58 81 202 225 187 226 0.91 # 31199 # 32215 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.551 1_29 - 339 Med9 PF07544.8 83 0.00033 11.8 3.9 2 2 0.0022 0.076 4.3 0.3 54 79 279 304 264 306 0.91 # 31199 # 32215 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.551 1_4 - 218 DDE_Tnp_IS240 PF13610.1 140 6.9e-10 30.4 0.0 1 1 2.5e-11 8.6e-10 30.1 0.0 2 139 50 191 49 192 0.85 # 2818 # 3471 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.547 1_7 - 1912 DAP3 PF10236.4 309 0.00022 11.6 0.0 1 1 1.2e-05 0.00041 10.7 0.0 25 59 442 476 436 516 0.86 # 7169 # 12904 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.443 1_2 - 400 Zn_Tnp_IS1595 PF12760.2 46 0.0023 9.2 6.7 1 2 0.0026 0.088 4.1 1.2 19 32 73 85 57 97 0.74 # 1059 # 2258 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.562 1_2 - 400 Zn_Tnp_IS1595 PF12760.2 46 0.0023 9.2 6.7 2 2 0.0005 0.017 6.4 0.4 8 32 350 374 346 379 0.84 # 1059 # 2258 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.562 1_21 - 192 MarR_2 PF12802.2 62 6.2e-05 14.1 0.2 1 2 0.0012 0.042 5.0 0.1 5 31 12 41 10 43 0.78 # 26531 # 27106 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.674 1_21 - 192 MarR_2 PF12802.2 62 6.2e-05 14.1 0.2 2 2 0.00044 0.015 6.5 0.0 41 57 57 73 51 76 0.84 # 26531 # 27106 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.674 1_7 - 1912 Helicase_RecD PF05127.9 177 5.1e-05 14.3 0.1 1 2 4.5e-05 0.0015 9.5 0.0 1 49 444 491 444 554 0.75 # 7169 # 12904 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.443 1_7 - 1912 Helicase_RecD PF05127.9 177 5.1e-05 14.3 0.1 2 2 0.0087 0.3 2.1 0.0 28 103 1275 1393 1254 1411 0.70 # 7169 # 12904 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.443 1_33 - 209 AAA_10 PF12846.2 304 5.3e-05 14.1 0.0 1 1 7.5e-06 8.5e-05 13.4 0.0 11 39 11 39 3 67 0.90 # 33962 # 34588 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.453 1_7 - 1912 AAA_10 PF12846.2 304 0.00013 12.8 0.2 1 1 6e-05 0.00068 10.4 0.0 2 34 441 473 440 484 0.90 # 7169 # 12904 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.443 1_27 - 132 AAA_10 PF12846.2 304 0.00026 11.8 0.0 1 2 0.0002 0.0023 8.7 0.0 241 264 12 35 9 45 0.89 # 30457 # 30852 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.548 1_27 - 132 AAA_10 PF12846.2 304 0.00026 11.8 0.0 2 2 0.04 0.46 1.2 0.0 209 235 104 128 68 130 0.72 # 30457 # 30852 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.548 1_2 - 400 DNA_RNApol_7kD PF03604.8 32 0.081 3.9 10.7 1 2 0.038 1.3 0.1 0.1 23 28 43 48 41 49 0.90 # 1059 # 2258 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.562 1_2 - 400 DNA_RNApol_7kD PF03604.8 32 0.081 3.9 10.7 2 2 5.7e-05 0.0019 9.1 0.5 14 30 357 373 350 374 0.88 # 1059 # 2258 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.562 1_33 - 209 ArsA_ATPase PF02374.10 305 1.1e-08 25.8 0.4 1 2 1.2e-09 3.9e-08 24.0 0.1 3 48 3 48 1 69 0.85 # 33962 # 34588 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.453 1_33 - 209 ArsA_ATPase PF02374.10 305 1.1e-08 25.8 0.4 2 2 0.053 1.8 -1.2 0.0 121 135 69 85 47 86 0.75 # 33962 # 34588 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.453 1_33 - 209 AAA_31 PF13614.1 157 1.4e-06 19.7 0.0 1 2 2.5e-07 8.6e-06 17.1 0.0 2 42 2 42 1 55 0.88 # 33962 # 34588 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.453 1_33 - 209 AAA_31 PF13614.1 157 1.4e-06 19.7 0.0 2 2 0.055 1.9 -0.2 0.0 109 127 68 86 62 113 0.68 # 33962 # 34588 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.453 1_7 - 1912 IstB_IS21 PF01695.12 178 7.6e-06 16.8 0.0 1 1 5.6e-07 1.9e-05 15.5 0.0 46 83 439 476 421 523 0.86 # 7169 # 12904 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.443 1_7 - 1912 AAA_11 PF13086.1 236 3.9e-23 73.6 0.8 1 2 2.1e-11 7e-10 30.2 0.3 3 134 427 590 425 647 0.63 # 7169 # 12904 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.443 1_7 - 1912 AAA_11 PF13086.1 236 3.9e-23 73.6 0.8 2 2 9.2e-15 3.1e-13 41.2 0.0 190 233 1378 1420 1259 1422 0.81 # 7169 # 12904 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.443 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/bd0a21a5-cfef-424c-bfa8-d3f58f4ed761 # Target file: checkm_output/bins/pm688/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm688/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/bd0a21a5-cfef-424c-bfa8-d3f58f4ed761 checkm_output/bins/pm688/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:12:17 2017 # [ok]