# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 3_4 - 80 rve_3 PF13683.1 67 0.00015 13.8 0.4 1 2 5.8e-05 0.0041 9.1 0.1 33 53 3 22 1 23 0.86 # 1662 # 1901 # -1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.429 3_4 - 80 rve_3 PF13683.1 67 0.00015 13.8 0.4 2 2 0.0046 0.33 3.0 0.0 36 51 41 56 30 57 0.78 # 1662 # 1901 # -1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.429 1_25 - 185 HTH_38 PF13936.1 44 0.00013 14.0 0.1 1 1 3.7e-06 0.00026 13.0 0.1 2 39 140 177 139 178 0.95 # 18017 # 18571 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.454 2_25 - 100 MarR PF01047.17 59 0.00023 13.3 0.0 1 1 6.3e-06 0.00045 12.4 0.0 9 37 32 60 30 64 0.85 # 12873 # 13172 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.457 4_2 - 196 MT-A70 PF05063.9 176 1.4e-34 111.6 0.0 1 1 2.2e-36 1.6e-34 111.4 0.0 1 176 7 180 7 180 0.91 # 410 # 997 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.498 2_17 - 218 CbiA PF01656.18 195 1.2e-17 56.3 0.1 1 1 2.8e-19 2e-17 55.6 0.1 3 194 7 178 5 180 0.76 # 7579 # 8232 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.477 2_25 - 100 Sigma70_r4_2 PF08281.7 54 3.7e-06 18.8 0.0 1 1 2.5e-07 8.8e-06 17.6 0.0 20 45 34 59 34 64 0.89 # 12873 # 13172 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.457 2_23 - 91 Sigma70_r4_2 PF08281.7 54 0.00036 12.5 0.0 1 2 6.7e-05 0.0024 9.8 0.0 23 46 11 34 8 34 0.86 # 11993 # 12265 # -1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.465 2_23 - 91 Sigma70_r4_2 PF08281.7 54 0.00036 12.5 0.0 2 2 0.064 2.3 0.3 0.0 4 22 52 70 50 74 0.79 # 11993 # 12265 # -1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.465 2_25 - 100 Fe_dep_repress PF01325.14 60 0.00032 13.1 0.1 1 1 7.3e-06 0.00052 12.4 0.1 8 41 26 59 21 64 0.79 # 12873 # 13172 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.457 2_17 - 218 MipZ PF09140.6 261 1.8e-10 32.7 0.0 1 1 4.1e-12 2.9e-10 32.0 0.0 5 60 7 62 3 129 0.77 # 7579 # 8232 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.477 2_25 - 100 Sigma70_r4 PF04545.11 50 3.2e-05 15.6 0.1 1 1 2.2e-06 7.7e-05 14.5 0.1 20 44 40 64 32 66 0.87 # 12873 # 13172 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.457 2_23 - 91 Sigma70_r4 PF04545.11 50 0.00013 13.7 0.0 1 1 8e-06 0.00029 12.6 0.0 16 38 10 32 7 37 0.84 # 11993 # 12265 # -1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.465 2_25 - 100 HTH_37 PF13744.1 80 3.8e-17 54.4 1.4 1 1 1.2e-18 4.4e-17 54.2 1.4 3 79 9 87 7 88 0.94 # 12873 # 13172 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.457 2_23 - 91 HTH_37 PF13744.1 80 0.00014 14.1 0.0 1 1 7.6e-06 0.00027 13.2 0.0 22 54 5 37 3 66 0.89 # 11993 # 12265 # -1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.465 2_25 - 100 HTH_25 PF13413.1 62 3e-06 19.3 0.2 1 1 7.6e-08 5.4e-06 18.5 0.2 2 34 32 64 31 88 0.79 # 12873 # 13172 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.457 2_7 - 94 Sulfolobus_pRN PF05584.6 72 0.00051 12.5 0.0 1 1 9.5e-06 0.00067 12.1 0.0 2 49 3 51 2 59 0.89 # 2184 # 2465 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.447 2_25 - 100 HTH_1 PF00126.22 60 0.00042 12.5 0.1 1 1 1.3e-05 0.00089 11.5 0.1 15 32 42 59 36 63 0.88 # 12873 # 13172 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.457 2_17 - 218 SRP54 PF00448.17 196 6.9e-05 14.8 0.0 1 1 1.3e-06 9.3e-05 14.3 0.0 4 91 6 89 3 150 0.88 # 7579 # 8232 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.477 2_15 - 219 HTH_3 PF01381.17 55 5e-14 44.4 0.1 1 1 3.2e-15 7.5e-14 43.8 0.1 1 53 16 68 16 70 0.93 # 6305 # 6961 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.464 2_25 - 100 HTH_3 PF01381.17 55 1.1e-11 36.9 0.5 1 1 7.5e-13 1.8e-11 36.2 0.5 2 52 33 83 32 85 0.93 # 12873 # 13172 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.457 2_23 - 91 HTH_3 PF01381.17 55 4.3e-09 28.6 0.0 1 1 2.7e-10 6.3e-09 28.1 0.0 1 36 6 40 6 50 0.91 # 11993 # 12265 # -1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.465 2_23 - 91 HTH_23 PF13384.1 50 7.1e-06 18.1 0.1 1 1 1.3e-06 3.1e-05 16.0 0.0 12 37 7 34 6 41 0.85 # 11993 # 12265 # -1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.465 1_25 - 185 HTH_23 PF13384.1 50 1.2e-05 17.4 0.2 1 1 1.2e-06 2.9e-05 16.1 0.2 9 36 150 177 117 179 0.95 # 18017 # 18571 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.454 2_25 - 100 HTH_23 PF13384.1 50 0.00014 13.9 0.0 1 1 1.4e-05 0.00033 12.8 0.0 12 37 33 60 16 64 0.84 # 12873 # 13172 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.457 1_25 - 185 HTH_7 PF02796.10 45 7e-15 47.1 0.0 1 1 1.9e-16 1.4e-14 46.2 0.0 1 44 138 181 138 182 0.97 # 18017 # 18571 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.454 2_15 - 219 HTH_19 PF12844.2 64 3.9e-11 35.4 0.0 1 1 3e-12 7.1e-11 34.5 0.0 3 63 15 75 13 76 0.94 # 6305 # 6961 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.464 2_25 - 100 HTH_19 PF12844.2 64 9.1e-08 24.6 0.1 1 1 6.6e-09 1.6e-07 23.8 0.1 7 54 35 82 32 89 0.90 # 12873 # 13172 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.457 2_23 - 91 HTH_19 PF12844.2 64 1.8e-07 23.6 0.0 1 1 9.7e-09 2.3e-07 23.3 0.0 2 52 4 54 3 64 0.88 # 11993 # 12265 # -1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.465 2_4 - 132 CoA_binding_3 PF13727.1 175 2e-05 16.9 0.7 1 1 3.6e-07 2.5e-05 16.5 0.7 26 81 31 88 25 120 0.77 # 1353 # 1748 # -1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.490 2_17 - 218 TIGR01968 TIGR01968 261 1e-08 26.9 1.4 1 2 3.4e-10 2.4e-08 25.7 0.8 5 40 6 41 2 45 0.93 # 7579 # 8232 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.477 2_17 - 218 TIGR01968 TIGR01968 261 1e-08 26.9 1.4 2 2 0.055 3.9 -1.2 0.0 98 121 70 91 65 111 0.78 # 7579 # 8232 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.477 1_25 - 185 HTH_psq PF05225.11 45 0.00028 12.9 0.0 1 1 7.2e-06 0.00051 12.1 0.0 13 37 156 179 153 183 0.91 # 18017 # 18571 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.454 3_9 - 458 Methyltransf_12 PF08242.7 99 2.6e-05 17.1 0.1 1 1 1.1e-06 8.1e-05 15.5 0.1 2 98 243 333 242 334 0.73 # 6210 # 7583 # -1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.490 2_23 - 91 HTH_28 PF13518.1 52 7.9e-06 18.3 0.1 1 1 5.3e-07 1.3e-05 17.7 0.1 6 32 6 34 6 37 0.87 # 11993 # 12265 # -1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.465 1_25 - 185 HTH_28 PF13518.1 52 6.1e-05 15.5 0.1 1 1 5.3e-06 0.00013 14.5 0.1 7 31 153 177 150 178 0.94 # 18017 # 18571 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.454 1_27 - 96 HTH_28 PF13518.1 52 0.0001 14.8 0.0 1 1 6e-06 0.00014 14.3 0.0 11 33 36 59 29 70 0.89 # 20379 # 20666 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.444 2_25 - 100 HTH_24 PF13412.1 48 0.00012 13.9 0.4 1 1 1.2e-05 0.00042 12.2 0.0 18 36 41 59 34 60 0.93 # 12873 # 13172 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.457 2_7 - 94 HTH_24 PF13412.1 48 0.00037 12.3 0.0 1 1 1.6e-05 0.00056 11.8 0.0 8 48 11 51 9 51 0.89 # 2184 # 2465 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.447 3_5 - 619 Terminase_GpA PF05876.7 557 2.1e-175 576.6 0.0 1 1 3.8e-177 2.7e-175 576.2 0.0 4 551 34 583 31 590 0.96 # 1913 # 3769 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.445 2_25 - 100 HTH_31 PF13560.1 64 3.8e-12 38.7 0.0 1 1 2.3e-13 5.4e-12 38.3 0.0 6 56 32 81 31 89 0.92 # 12873 # 13172 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.457 2_15 - 219 HTH_31 PF13560.1 64 1.8e-11 36.6 0.0 1 1 1.1e-12 2.7e-11 36.0 0.0 2 57 12 66 11 75 0.95 # 6305 # 6961 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.464 2_23 - 91 HTH_31 PF13560.1 64 9.3e-11 34.3 0.0 1 1 5.9e-12 1.4e-10 33.7 0.0 3 42 3 42 2 62 0.86 # 11993 # 12265 # -1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.465 2_25 - 100 HTH_6 PF01418.12 77 2.1e-05 16.7 0.1 1 1 4.6e-07 3.2e-05 16.1 0.1 17 56 23 62 12 73 0.89 # 12873 # 13172 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.457 2_17 - 218 AAA_17 PF13207.1 121 7.3e-05 16.0 0.0 1 1 3.8e-06 0.00027 14.2 0.0 6 38 10 61 5 131 0.62 # 7579 # 8232 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.477 2_17 - 218 AAA_25 PF13481.1 194 1e-05 17.4 1.0 1 1 5.3e-07 3.8e-05 15.6 1.0 34 92 4 52 2 96 0.67 # 7579 # 8232 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.477 2_17 - 218 VirC1 PF07015.6 231 0.0004 11.9 0.0 1 1 1.1e-05 0.00077 11.0 0.0 10 130 11 128 3 132 0.84 # 7579 # 8232 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.477 2_17 - 218 Methyltransf_16 PF10294.4 174 0.00025 12.9 0.0 1 1 5.5e-06 0.00039 12.3 0.0 62 146 23 107 19 112 0.89 # 7579 # 8232 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.477 2_7 - 94 PaaX PF07848.7 70 0.00037 13.0 0.0 1 1 1.2e-05 0.00088 11.7 0.0 29 64 26 61 20 63 0.88 # 2184 # 2465 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.447 3_9 - 458 Methyltransf_23 PF13489.1 161 4.7e-17 54.6 0.0 1 1 1.1e-18 7.7e-17 53.9 0.0 20 159 235 400 198 402 0.72 # 6210 # 7583 # -1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.490 4_4 - 66 FERM_N PF09379.5 80 0.0003 13.3 0.0 1 1 4.7e-06 0.00034 13.1 0.0 6 43 11 50 7 60 0.88 # 1379 # 1576 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_15 - 219 HTH_26 PF13443.1 63 5e-06 19.1 0.0 1 1 5.2e-07 1.2e-05 17.9 0.0 1 53 15 66 15 71 0.92 # 6305 # 6961 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.464 2_25 - 100 HTH_26 PF13443.1 63 1.6e-05 17.5 0.1 1 1 1.2e-06 2.8e-05 16.7 0.1 4 45 34 74 32 81 0.81 # 12873 # 13172 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.457 3_6 - 184 HTH_26 PF13443.1 63 0.00053 12.7 0.0 1 1 6e-05 0.0014 11.3 0.0 11 35 3 29 1 38 0.81 # 3775 # 4326 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.482 3_6 - 184 HTH_17 PF12728.2 51 3.1e-05 16.7 0.0 1 1 8.3e-07 5.9e-05 15.8 0.0 4 34 6 36 3 43 0.83 # 3775 # 4326 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.482 1_27 - 96 Sigma70_ECF PF07638.6 185 0.00033 12.8 0.0 1 1 5.5e-06 0.00039 12.5 0.0 121 180 5 66 1 69 0.83 # 20379 # 20666 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.444 2_7 - 94 MarR_2 PF12802.2 62 1.4e-05 17.2 0.0 1 1 5.4e-07 1.9e-05 16.7 0.0 9 55 10 54 9 57 0.93 # 2184 # 2465 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.447 2_25 - 100 MarR_2 PF12802.2 62 0.00016 13.8 0.1 1 1 1e-05 0.00037 12.6 0.1 21 41 40 60 2 63 0.85 # 12873 # 13172 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.457 2_7 - 94 TrmB PF01978.14 68 7.2e-06 18.1 0.0 1 1 1.6e-07 1.1e-05 17.5 0.0 23 68 21 66 13 66 0.89 # 2184 # 2465 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.447 3_9 - 458 Methyltransf_18 PF12847.2 112 0.00018 14.6 0.0 1 1 8.9e-06 0.00063 12.8 0.0 2 109 238 336 237 338 0.79 # 6210 # 7583 # -1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.490 1_13 - 931 AAA_13 PF13166.1 712 0.059 4.1 25.6 1 2 4.7e-05 0.0033 8.2 19.4 271 478 18 232 12 243 0.79 # 6384 # 9176 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.425 1_13 - 931 AAA_13 PF13166.1 712 0.059 4.1 25.6 2 2 0.054 3.9 -1.9 0.4 485 494 448 457 398 551 0.51 # 6384 # 9176 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.425 2_17 - 218 ArsA_ATPase PF02374.10 305 1.9e-07 22.8 0.1 1 2 2.7e-08 1.9e-06 19.5 0.2 5 38 7 40 3 42 0.93 # 7579 # 8232 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.477 2_17 - 218 ArsA_ATPase PF02374.10 305 1.9e-07 22.8 0.1 2 2 0.016 1.2 0.5 0.0 117 133 72 88 60 91 0.91 # 7579 # 8232 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.477 2_17 - 218 AAA_31 PF13614.1 157 2.5e-09 29.6 0.0 1 2 2.2e-08 1.6e-06 20.6 0.0 3 44 5 46 4 65 0.89 # 7579 # 8232 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.477 2_17 - 218 AAA_31 PF13614.1 157 2.5e-09 29.6 0.0 2 2 0.00034 0.024 7.0 0.0 116 149 78 112 69 119 0.83 # 7579 # 8232 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.477 2_17 - 218 IstB_IS21 PF01695.12 178 0.00018 13.4 0.3 1 1 7e-06 0.0005 11.9 0.3 51 89 7 45 4 108 0.89 # 7579 # 8232 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.477 2_7 - 94 FaeA PF04703.7 62 2.6e-05 16.8 0.0 1 1 5.6e-07 4e-05 16.2 0.0 4 46 10 51 7 56 0.87 # 2184 # 2465 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.447 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/63e83137-d200-44cb-ab30-e0070ee32e50 # Target file: checkm_output/bins/pm668/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm668/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/63e83137-d200-44cb-ab30-e0070ee32e50 checkm_output/bins/pm668/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:11:49 2017 # [ok]