# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 4_14 - 426 K_oxygenase PF13434.1 341 4.2e-118 387.5 0.0 1 1 3.6e-120 5.1e-118 387.2 0.0 2 340 4 333 3 334 0.96 # 11619 # 12896 # 1 # ID=4_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 3_14 - 251 HTH_IclR PF09339.5 52 3.7e-11 35.9 0.0 1 1 1.4e-12 6.4e-11 35.1 0.0 1 50 8 56 8 58 0.97 # 10310 # 11062 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.494 1_49 - 341 HTH_IclR PF09339.5 52 3.1e-06 20.1 0.1 1 1 1.8e-07 8.4e-06 18.8 0.1 15 40 14 39 13 40 0.95 # 41876 # 42898 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 6_1 - 511 HTH_IclR PF09339.5 52 7.3e-05 15.7 0.2 1 2 0.062 2.9 1.0 0.0 24 36 165 177 163 186 0.81 # 398 # 1930 # -1 # ID=6_1;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.693 6_1 - 511 HTH_IclR PF09339.5 52 7.3e-05 15.7 0.2 2 2 2.8e-05 0.0013 11.7 0.2 25 50 228 253 222 255 0.93 # 398 # 1930 # -1 # ID=6_1;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.693 3_7 - 358 ABC_tran PF00005.22 137 7.2e-36 116.9 0.0 1 1 4.2e-37 1.5e-35 115.9 0.0 1 136 17 159 17 160 0.90 # 3330 # 4403 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 4_3 - 276 ABC_tran PF00005.22 137 5.3e-30 97.9 0.0 1 1 2.2e-31 7.8e-30 97.4 0.0 1 136 23 170 23 171 0.89 # 1341 # 2168 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_48 - 260 ABC_tran PF00005.22 137 0.00021 15.0 0.3 1 1 4.8e-05 0.0017 12.1 0.0 8 30 99 121 93 136 0.86 # 41097 # 41876 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 2_20 - 522 ABC_tran PF00005.22 137 0.00022 14.9 0.0 1 1 1.9e-05 0.00067 13.4 0.0 14 113 27 155 17 158 0.73 # 17832 # 19397 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 3_25 - 119 HTH_22 PF13309.1 64 0.00091 12.4 0.0 1 1 4.1e-05 0.0029 10.8 0.0 28 64 8 39 1 39 0.80 # 18184 # 18540 # 1 # ID=3_25;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 1_49 - 341 HTH_22 PF13309.1 64 0.00092 12.4 0.0 1 1 2.6e-05 0.0019 11.4 0.0 46 64 21 39 10 39 0.89 # 41876 # 42898 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 1_49 - 341 HTH_AsnC-type PF13404.1 42 0.00082 12.3 0.0 1 1 1.5e-05 0.0021 11.0 0.0 18 36 18 36 15 40 0.91 # 41876 # 42898 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 1_13 - 188 N6_Mtase PF02384.11 311 0.0004 12.9 0.0 1 2 3.4e-05 0.0048 9.3 0.0 28 62 32 66 21 75 0.89 # 8885 # 9448 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.592 1_13 - 188 N6_Mtase PF02384.11 311 0.0004 12.9 0.0 2 2 0.018 2.5 0.4 0.0 128 137 115 124 106 133 0.84 # 8885 # 9448 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.592 1_22 - 284 rve_3 PF13683.1 67 6.2e-18 57.6 0.0 1 1 4.5e-19 2.1e-17 55.9 0.0 1 67 205 271 205 271 0.98 # 15083 # 15934 # 1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.428 3_3 - 149 rve_3 PF13683.1 67 6e-13 41.6 0.0 1 1 2e-14 9.4e-13 41.0 0.0 7 58 70 121 65 130 0.89 # 882 # 1328 # 1 # ID=3_3;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.515 1_49 - 341 rve_3 PF13683.1 67 0.0006 12.8 0.1 1 1 4.8e-05 0.0023 10.9 0.0 6 65 220 287 215 288 0.87 # 41876 # 42898 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 1_48 - 260 Sigma54_activat PF00158.21 168 0.00019 14.3 0.1 1 1 8.2e-06 0.0012 11.8 0.1 18 53 98 133 82 198 0.72 # 41097 # 41876 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 3_25 - 119 HTH_DeoR PF08220.7 57 0.0007 12.6 0.0 1 1 7.8e-06 0.0011 11.9 0.0 5 36 9 39 7 50 0.80 # 18184 # 18540 # 1 # ID=3_25;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 3_7 - 358 Adeno_IVa2 PF02456.10 370 0.0014 10.6 0.0 1 1 2.2e-05 0.0031 9.5 0.0 90 116 30 53 5 72 0.75 # 3330 # 4403 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 6_5 - 246 Methyltransf_4 PF02390.12 197 0.0002 13.8 0.1 1 1 2.7e-06 0.00038 12.9 0.0 17 52 27 62 3 102 0.72 # 3538 # 4275 # -1 # ID=6_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 1_49 - 341 HTH_40 PF14493.1 91 0.00025 14.6 0.0 1 1 3.8e-06 0.00054 13.6 0.0 4 35 8 39 5 69 0.91 # 41876 # 42898 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 1_49 - 341 HTH_38 PF13936.1 44 1.9e-11 36.8 0.5 1 1 1e-12 7.3e-11 34.9 0.2 6 41 3 38 2 40 0.94 # 41876 # 42898 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 3_25 - 119 HTH_38 PF13936.1 44 3.6e-08 26.3 0.1 1 1 1.2e-09 8.7e-08 25.1 0.1 5 42 2 39 2 39 0.94 # 18184 # 18540 # 1 # ID=3_25;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 1_41 - 730 MobB PF03205.9 140 0.0015 11.6 0.0 1 1 2.6e-05 0.0037 10.4 0.0 7 34 192 219 188 225 0.89 # 30433 # 32622 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 2_21 - 341 UvrD-helicase PF00580.16 315 1.4e-08 27.7 0.1 1 2 5.9e-06 0.00083 12.0 0.1 16 69 4 49 2 78 0.83 # 19382 # 20404 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.541 2_21 - 341 UvrD-helicase PF00580.16 315 1.4e-08 27.7 0.1 2 2 2.6e-06 0.00037 13.2 0.0 242 294 115 170 96 174 0.86 # 19382 # 20404 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.541 5_5 - 102 HTH_34 PF13601.1 80 6.6e-10 32.4 0.1 1 1 6.6e-12 9.3e-10 31.9 0.1 25 79 39 93 30 94 0.92 # 4405 # 4710 # -1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 5_5 - 102 MarR PF01047.17 59 6.3e-05 16.1 0.0 1 1 6.2e-07 8.7e-05 15.6 0.0 29 58 40 69 13 70 0.92 # 4405 # 4710 # -1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 3_2 - 153 Sigma54_DBD PF04552.8 160 0.00041 13.3 0.1 1 1 5.3e-06 0.00074 12.4 0.0 97 154 42 97 26 103 0.76 # 440 # 898 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.542 4_14 - 426 Pyr_redox_3 PF13738.1 203 3.1e-18 59.9 0.0 1 2 2e-16 2.8e-14 47.0 0.0 78 200 93 218 64 221 0.87 # 11619 # 12896 # 1 # ID=4_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 4_14 - 426 Pyr_redox_3 PF13738.1 203 3.1e-18 59.9 0.0 2 2 2.2e-05 0.0031 10.9 0.0 48 172 234 375 225 381 0.65 # 11619 # 12896 # 1 # ID=4_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 5_3 - 195 TetR_N PF00440.18 47 4.6e-08 26.0 0.0 1 1 1.3e-09 8.9e-08 25.1 0.0 2 46 13 57 12 58 0.95 # 2337 # 2921 # 1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.609 1_49 - 341 TetR_N PF00440.18 47 0.00099 12.2 0.2 1 1 3.4e-05 0.0024 10.9 0.0 16 36 17 37 16 43 0.86 # 41876 # 42898 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 1_42 - 1757 AAA_19 PF13245.1 76 2.5e-07 23.8 2.0 1 1 1.1e-08 7.9e-07 22.2 0.5 7 76 981 1047 974 1047 0.74 # 32622 # 37892 # 1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 1_48 - 260 AAA_19 PF13245.1 76 0.00058 13.0 0.0 1 1 2.1e-05 0.0015 11.7 0.0 10 37 103 129 96 154 0.81 # 41097 # 41876 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 2_5 - 389 CbiA PF01656.18 195 1.4e-36 119.1 0.0 1 1 1.3e-38 1.9e-36 118.7 0.0 2 194 110 339 109 340 0.80 # 3672 # 4838 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_49 - 341 Sigma70_r4_2 PF08281.7 54 1.2e-07 24.6 0.0 1 1 5.6e-09 2.6e-07 23.4 0.0 25 48 16 39 12 40 0.94 # 41876 # 42898 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 3_25 - 119 Sigma70_r4_2 PF08281.7 54 5.3e-05 16.1 0.0 1 1 1.9e-06 8.8e-05 15.4 0.0 31 47 22 38 9 39 0.92 # 18184 # 18540 # 1 # ID=3_25;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 1_28 - 226 Sigma70_r4_2 PF08281.7 54 0.00076 12.4 0.0 1 1 3.2e-05 0.0015 11.4 0.0 22 49 157 184 140 185 0.86 # 20186 # 20863 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.316 5_5 - 102 PadR PF03551.9 75 8.2e-23 73.4 0.5 1 1 8e-25 1.1e-22 73.0 0.5 1 74 15 84 15 85 0.97 # 4405 # 4710 # -1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 2_6 - 252 Rep_3 PF01051.16 222 2.7e-49 161.1 0.0 1 1 4.4e-51 3.1e-49 160.9 0.0 3 222 16 242 14 242 0.91 # 5426 # 6181 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 3_23 - 326 Rep_3 PF01051.16 222 2.2e-33 109.0 0.1 1 1 4.3e-35 3.1e-33 108.6 0.1 3 214 10 265 8 271 0.90 # 16461 # 17438 # -1 # ID=3_23;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.522 1_22 - 284 rve PF00665.21 120 3.3e-30 98.1 0.0 1 1 1.4e-31 5.1e-30 97.5 0.0 2 120 118 234 117 234 0.97 # 15083 # 15934 # 1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.428 1_49 - 341 rve PF00665.21 120 2e-22 72.9 0.0 1 1 1.1e-23 3.9e-22 72.0 0.0 3 118 118 242 117 244 0.96 # 41876 # 42898 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 3_3 - 149 rve PF00665.21 120 3.8e-20 65.6 0.0 1 1 1.8e-21 6.4e-20 64.9 0.0 28 119 2 92 1 93 0.97 # 882 # 1328 # 1 # ID=3_3;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.515 7_1 - 241 rve PF00665.21 120 2.6e-13 43.6 0.2 1 2 0.059 2.1 1.9 0.0 78 102 33 55 10 60 0.83 # 53 # 775 # -1 # ID=7_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 7_1 - 241 rve PF00665.21 120 2.6e-13 43.6 0.2 2 2 1.3e-13 4.7e-12 39.5 0.0 9 119 81 188 76 189 0.89 # 53 # 775 # -1 # ID=7_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_48 - 260 AFG1_ATPase PF03969.11 362 0.0001 14.6 0.2 1 1 2.8e-06 0.00039 12.6 0.2 63 216 103 254 43 259 0.72 # 41097 # 41876 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_49 - 341 Terminase_5 PF06056.7 58 0.00085 12.3 0.0 1 1 1.4e-05 0.002 11.1 0.0 9 36 13 40 9 44 0.85 # 41876 # 42898 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 2_20 - 522 AAA_23 PF13476.1 202 4.7e-12 40.0 0.0 1 1 4.8e-13 2.3e-11 37.8 0.0 1 53 6 58 6 115 0.85 # 17832 # 19397 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 4_3 - 276 AAA_23 PF13476.1 202 1.5e-05 18.7 0.2 1 1 5.7e-07 2.7e-05 17.9 0.2 21 40 35 54 22 64 0.86 # 1341 # 2168 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 3_7 - 358 AAA_23 PF13476.1 202 0.00086 13.0 0.0 1 1 2.8e-05 0.0013 12.4 0.0 14 37 21 45 2 49 0.78 # 3330 # 4403 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 1_13 - 188 Methyltransf_26 PF13659.1 117 7e-14 45.3 0.1 1 1 2.7e-15 1.3e-13 44.5 0.1 2 114 52 147 51 150 0.90 # 8885 # 9448 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.592 6_5 - 246 Methyltransf_26 PF13659.1 117 6.4e-09 29.3 0.0 1 1 2.2e-10 1e-08 28.6 0.0 2 83 31 106 30 200 0.81 # 3538 # 4275 # -1 # ID=6_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 1_4 - 171 Methyltransf_26 PF13659.1 117 4.6e-06 20.1 0.0 1 1 1.7e-07 8.1e-06 19.3 0.0 4 45 110 150 107 166 0.82 # 2651 # 3163 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.587 1_41 - 730 Zeta_toxin PF06414.7 201 0.0012 11.4 0.0 1 1 3.5e-05 0.0049 9.3 0.0 21 49 190 219 182 236 0.85 # 30433 # 32622 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_42 - 1757 AAA_30 PF13604.1 196 2.8e-44 144.4 13.9 1 2 2.4e-05 0.0011 11.9 2.7 7 147 420 552 416 562 0.84 # 32622 # 37892 # 1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 1_42 - 1757 AAA_30 PF13604.1 196 2.8e-44 144.4 13.9 2 2 1.5e-43 7e-42 136.6 1.9 1 186 968 1156 968 1162 0.94 # 32622 # 37892 # 1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 1_41 - 730 AAA_30 PF13604.1 196 0.00085 12.3 0.0 1 1 3.9e-05 0.0018 11.2 0.0 21 57 188 224 180 230 0.85 # 30433 # 32622 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 4_3 - 276 AAA_30 PF13604.1 196 0.00087 12.3 0.3 1 1 4.4e-05 0.0021 11.0 0.1 15 53 30 68 21 83 0.74 # 1341 # 2168 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 2_20 - 522 SMC_N PF02463.14 220 3.5e-11 36.1 0.0 1 2 4.2e-11 2e-09 30.4 0.0 2 69 4 67 3 79 0.85 # 17832 # 19397 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 2_20 - 522 SMC_N PF02463.14 220 3.5e-11 36.1 0.0 2 2 0.0071 0.33 3.5 0.0 163 204 281 321 253 330 0.85 # 17832 # 19397 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 4_3 - 276 SMC_N PF02463.14 220 3.1e-08 26.4 0.2 1 1 1.7e-09 7.9e-08 25.1 0.2 25 198 34 201 22 218 0.75 # 1341 # 2168 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 3_7 - 358 SMC_N PF02463.14 220 6.4e-08 25.4 0.2 1 1 2.6e-08 1.2e-06 21.2 0.2 24 209 27 203 16 211 0.66 # 3330 # 4403 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 3_1 - 146 HTH_Tnp_1 PF01527.15 76 4.4e-09 29.6 0.1 1 1 1.5e-10 7e-09 29.0 0.1 24 75 68 125 62 125 0.86 # 3 # 440 # 1 # ID=3_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.534 1_21 - 174 HTH_Tnp_1 PF01527.15 76 3.2e-07 23.7 0.2 1 2 2.6e-07 1.2e-05 18.6 0.0 5 49 4 49 1 63 0.87 # 14565 # 15086 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.462 1_21 - 174 HTH_Tnp_1 PF01527.15 76 3.2e-07 23.7 0.2 2 2 0.023 1.1 2.8 0.1 9 52 65 113 62 137 0.70 # 14565 # 15086 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.462 7_1 - 241 HTH_Tnp_1 PF01527.15 76 0.00037 13.9 0.3 1 1 1.7e-05 0.00079 12.8 0.3 4 51 12 64 10 69 0.79 # 53 # 775 # -1 # ID=7_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_49 - 341 GerE PF00196.14 58 2.6e-06 20.1 0.0 1 1 7.1e-08 5e-06 19.2 0.0 17 39 16 38 8 40 0.89 # 41876 # 42898 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 3_25 - 119 GerE PF00196.14 58 0.00014 14.6 0.0 1 1 3.5e-06 0.00025 13.8 0.0 17 40 16 39 9 40 0.83 # 18184 # 18540 # 1 # ID=3_25;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 1_41 - 730 TraG-D_C PF12696.2 128 1.1e-20 67.2 0.0 1 1 1.4e-22 1.9e-20 66.4 0.0 1 127 419 541 419 542 0.86 # 30433 # 32622 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 6_5 - 246 CMAS PF02353.15 273 0.00024 13.6 0.6 1 1 3e-06 0.00042 12.8 0.0 51 105 18 71 12 99 0.78 # 3538 # 4275 # -1 # ID=6_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 7_1 - 241 DDE_3 PF13358.1 146 0.00064 12.9 0.0 1 1 1.4e-05 0.0019 11.3 0.0 32 90 88 147 65 152 0.87 # 53 # 775 # -1 # ID=7_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_48 - 260 Bac_DnaA PF00308.13 219 1.5e-09 31.2 0.0 1 1 1.6e-11 2.2e-09 30.6 0.0 37 136 105 202 75 207 0.85 # 41097 # 41876 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 3_7 - 358 TIGR03263 TIGR03263 180 8.2e-05 15.4 0.1 1 2 3.1e-06 0.00044 13.0 0.0 2 22 28 48 27 85 0.82 # 3330 # 4403 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 3_7 - 358 TIGR03263 TIGR03263 180 8.2e-05 15.4 0.1 2 2 0.036 5.1 -0.2 0.1 115 152 151 188 135 204 0.81 # 3330 # 4403 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 2_5 - 389 MipZ PF09140.6 261 6.1e-06 18.8 0.4 1 2 3.5e-06 0.0005 12.6 0.0 2 47 108 153 107 157 0.87 # 3672 # 4838 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 2_5 - 389 MipZ PF09140.6 261 6.1e-06 18.8 0.4 2 2 0.0011 0.16 4.4 0.0 88 134 224 270 197 292 0.84 # 3672 # 4838 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_1 - 317 DDE_Tnp_1 PF01609.16 213 7.9e-35 113.7 0.0 1 1 7.3e-37 1e-34 113.3 0.0 6 213 24 258 19 258 0.96 # 3 # 953 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.339 1_22 - 284 DDE_Tnp_1_2 PF13586.1 88 0.00071 13.2 0.1 1 1 2.6e-05 0.0037 10.9 0.1 3 58 187 231 185 235 0.82 # 15083 # 15934 # 1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.428 4_3 - 276 AAA_21 PF13304.1 303 1e-17 58.4 0.0 1 2 3.9e-09 1.8e-07 24.7 0.0 1 25 35 63 35 100 0.77 # 1341 # 2168 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 4_3 - 276 AAA_21 PF13304.1 303 1e-17 58.4 0.0 2 2 2.5e-11 1.2e-09 31.9 0.0 232 298 138 201 107 203 0.84 # 1341 # 2168 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 2_20 - 522 AAA_21 PF13304.1 303 8.8e-14 45.5 0.1 1 2 2.1e-06 0.0001 15.7 0.0 2 24 27 49 27 76 0.83 # 17832 # 19397 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 2_20 - 522 AAA_21 PF13304.1 303 8.8e-14 45.5 0.1 2 2 6.2e-10 2.9e-08 27.3 0.2 261 301 280 318 243 320 0.90 # 17832 # 19397 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 3_7 - 358 AAA_21 PF13304.1 303 1.2e-10 35.1 0.0 1 2 1.1e-07 5e-06 20.0 0.0 1 59 29 96 29 112 0.69 # 3330 # 4403 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 3_7 - 358 AAA_21 PF13304.1 303 1.2e-10 35.1 0.0 2 2 1.3e-05 0.00063 13.1 0.0 234 298 129 191 118 197 0.88 # 3330 # 4403 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 1_49 - 341 Sigma70_r4 PF04545.11 50 0.00059 12.6 0.2 1 1 2e-05 0.0029 10.4 0.1 19 39 16 36 9 39 0.88 # 41876 # 42898 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 5_5 - 102 Replic_Relax PF13814.1 191 4.9e-05 16.6 0.1 1 1 3.9e-07 5.5e-05 16.5 0.1 16 77 31 90 17 96 0.85 # 4405 # 4710 # -1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_49 - 341 DUF2316 PF10078.4 89 0.00073 12.9 0.0 1 1 1.1e-05 0.0016 11.9 0.0 20 82 14 85 5 91 0.82 # 41876 # 42898 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 1_48 - 260 AAA PF00004.24 132 2.6e-07 24.3 0.0 1 1 6.3e-09 4.5e-07 23.5 0.0 1 74 105 180 105 214 0.77 # 41097 # 41876 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 3_7 - 358 AAA PF00004.24 132 0.00057 13.5 0.0 1 1 1.6e-05 0.0012 12.5 0.0 1 20 30 49 30 75 0.93 # 3330 # 4403 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 1_49 - 341 KorB PF08535.5 93 0.00098 12.7 0.0 1 1 2.9e-05 0.004 10.7 0.0 2 30 16 44 15 108 0.78 # 41876 # 42898 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 1_30 - 121 CTP_transf_2 PF01467.21 157 0.0015 12.0 0.0 1 1 1.2e-05 0.0017 11.8 0.0 32 64 7 38 2 93 0.70 # 21212 # 21574 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.499 6_2 - 114 Cpn60_TCP1 PF00118.19 485 0.00015 13.8 0.1 1 1 1.1e-06 0.00016 13.7 0.1 457 484 64 91 39 92 0.92 # 2157 # 2498 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.637 3_7 - 358 TOBE_2 PF08402.5 75 4.5e-12 39.3 0.1 1 1 7.2e-14 1e-11 38.1 0.1 1 75 270 342 270 342 0.94 # 3330 # 4403 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 1_4 - 171 N6_N4_Mtase PF01555.13 231 8.6e-30 97.3 0.0 1 2 1.8e-08 2.5e-06 20.5 0.0 42 114 1 67 1 82 0.89 # 2651 # 3163 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.587 1_4 - 171 N6_N4_Mtase PF01555.13 231 8.6e-30 97.3 0.0 2 2 3.1e-25 4.4e-23 75.3 0.0 169 228 84 143 70 146 0.90 # 2651 # 3163 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.587 1_22 - 284 rve_2 PF13333.1 52 2.6e-23 75.3 1.1 1 1 9.1e-25 6.4e-23 74.0 1.1 1 51 224 278 224 279 0.96 # 15083 # 15934 # 1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.428 3_3 - 149 rve_2 PF13333.1 52 4e-08 26.7 0.0 1 1 9.6e-10 6.8e-08 25.9 0.0 1 43 83 129 83 137 0.83 # 882 # 1328 # 1 # ID=3_3;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.515 2_5 - 389 MerR_1 PF13411.1 69 0.0005 13.2 0.0 1 1 1.1e-05 0.0015 11.7 0.0 2 44 41 88 40 105 0.75 # 3672 # 4838 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 2_21 - 341 cobW PF02492.14 178 0.0011 11.8 0.0 1 1 1.4e-05 0.002 11.0 0.0 4 30 5 31 3 53 0.72 # 19382 # 20404 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.541 3_7 - 358 AAA_16 PF13191.1 185 2.6e-07 24.2 0.1 1 1 2.3e-08 6.4e-07 22.9 0.1 14 48 18 50 15 84 0.78 # 3330 # 4403 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 1_41 - 730 AAA_16 PF13191.1 185 5.3e-06 19.9 0.0 1 1 1e-06 2.8e-05 17.5 0.0 21 60 182 222 179 263 0.81 # 30433 # 32622 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_48 - 260 AAA_16 PF13191.1 185 8.5e-05 16.0 1.0 1 1 1.5e-05 0.00042 13.7 0.1 16 41 97 119 84 146 0.78 # 41097 # 41876 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 2_16 - 1275 AAA_16 PF13191.1 185 0.00023 14.6 0.0 1 1 2.4e-05 0.00068 13.0 0.0 14 64 46 96 38 111 0.76 # 12939 # 16763 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.414 4_3 - 276 AAA_16 PF13191.1 185 0.00031 14.1 0.2 1 1 2.7e-05 0.00075 12.9 0.0 12 63 23 74 16 92 0.72 # 1341 # 2168 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 6_5 - 246 NodS PF05401.6 201 3.7e-08 26.4 0.0 1 1 4.2e-10 5.9e-08 25.7 0.0 41 120 27 106 7 116 0.86 # 3538 # 4275 # -1 # ID=6_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 1_48 - 260 AAA_22 PF13401.1 131 2.1e-06 21.3 0.2 1 2 6.7e-05 0.0031 11.0 0.0 5 21 103 119 99 131 0.83 # 41097 # 41876 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_48 - 260 AAA_22 PF13401.1 131 2.1e-06 21.3 0.2 2 2 0.0011 0.051 7.1 0.0 88 103 154 181 126 203 0.66 # 41097 # 41876 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 3_7 - 358 AAA_22 PF13401.1 131 2.8e-06 20.9 0.0 1 1 1.1e-07 5e-06 20.1 0.0 3 57 26 81 24 189 0.84 # 3330 # 4403 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 2_21 - 341 AAA_22 PF13401.1 131 4.7e-05 16.9 0.0 1 1 7.1e-06 0.00033 14.2 0.0 8 111 5 155 4 167 0.75 # 19382 # 20404 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.541 1_48 - 260 TIGR00362 TIGR00362 437 8.5e-11 34.5 0.0 1 1 7.1e-13 1e-10 34.3 0.0 139 240 104 203 28 210 0.86 # 41097 # 41876 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 2_5 - 389 HTH_AraC PF00165.18 42 0.0013 12.1 0.0 1 1 1.8e-05 0.0025 11.1 0.0 4 26 35 57 33 62 0.81 # 3672 # 4838 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_49 - 341 NUMOD1 PF07453.8 37 0.00036 13.8 0.1 1 1 4.9e-06 0.00069 12.9 0.1 20 37 21 38 19 38 0.91 # 41876 # 42898 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 5_5 - 102 DUF3116 PF11313.3 85 0.00058 12.9 0.1 1 1 5.7e-06 0.00081 12.4 0.1 49 83 50 88 39 90 0.75 # 4405 # 4710 # -1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 2_20 - 522 AAA_29 PF13555.1 62 1.3e-07 24.5 0.0 1 1 7.4e-09 2.6e-07 23.5 0.0 2 49 5 50 4 57 0.84 # 17832 # 19397 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 4_3 - 276 AAA_29 PF13555.1 62 1e-06 21.6 0.2 1 1 6.9e-08 2.4e-06 20.4 0.2 18 44 29 54 14 63 0.83 # 1341 # 2168 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 3_7 - 358 AAA_29 PF13555.1 62 1.7e-05 17.7 0.0 1 1 1e-06 3.6e-05 16.7 0.0 17 40 22 44 17 48 0.85 # 3330 # 4403 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 1_48 - 260 AAA_29 PF13555.1 62 0.001 12.0 0.0 1 1 5.7e-05 0.002 11.1 0.0 19 59 98 139 89 141 0.72 # 41097 # 41876 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_37 - 940 Orn_Arg_deC_N PF02784.11 251 0.0017 10.9 0.1 1 1 1.2e-05 0.0017 10.9 0.1 171 212 610 650 599 682 0.78 # 25356 # 28175 # 1 # ID=1_37;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.507 3_25 - 119 HTH_Tnp_Tc3_1 PF11427.3 50 0.00031 13.8 0.0 1 1 3.6e-06 0.00051 13.1 0.0 12 44 9 41 2 43 0.92 # 18184 # 18540 # 1 # ID=3_25;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 3_7 - 358 AAA_28 PF13521.1 163 3.8e-05 17.1 0.0 1 1 1e-06 7e-05 16.2 0.0 2 22 30 50 29 112 0.79 # 3330 # 4403 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 1_48 - 260 AAA_28 PF13521.1 163 0.0015 11.9 1.6 1 1 5.9e-05 0.0042 10.4 0.2 1 43 104 151 104 172 0.70 # 41097 # 41876 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_29 - 76 IF2_assoc PF08364.6 41 0.0031 11.0 2.8 1 2 0.043 6.1 0.4 0.3 19 29 6 16 3 16 0.78 # 20951 # 21178 # 1 # ID=1_29;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.425 1_29 - 76 IF2_assoc PF08364.6 41 0.0031 11.0 2.8 2 2 2.7e-05 0.0038 10.7 0.1 16 32 28 44 27 51 0.85 # 20951 # 21178 # 1 # ID=1_29;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.425 1_21 - 174 HTH_32 PF13565.1 77 5.6e-10 33.3 0.3 1 2 2.1e-06 0.00015 15.9 0.0 2 57 39 88 38 92 0.82 # 14565 # 15086 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.462 1_21 - 174 HTH_32 PF13565.1 77 5.6e-10 33.3 0.3 2 2 3e-06 0.00021 15.5 0.2 1 45 96 141 96 167 0.71 # 14565 # 15086 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.462 7_1 - 241 HTH_32 PF13565.1 77 1.2e-06 22.7 0.1 1 1 7e-08 4.9e-06 20.7 0.0 25 76 10 56 2 57 0.83 # 53 # 775 # -1 # ID=7_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_49 - 341 HTH_3 PF01381.17 55 1.3e-06 21.6 0.1 1 1 1.8e-08 2.5e-06 20.7 0.1 7 37 15 45 8 48 0.91 # 41876 # 42898 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 3_7 - 358 Rad17 PF03215.10 519 3.1e-06 19.4 0.0 1 1 3.1e-08 4.4e-06 19.0 0.0 32 96 14 79 8 102 0.79 # 3330 # 4403 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 1_1 - 317 DDE_Tnp_1_4 PF13701.1 449 4.6e-27 87.6 0.9 1 1 5e-29 7.1e-27 87.0 0.9 140 438 21 314 10 316 0.83 # 3 # 953 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.339 1_21 - 174 HTH_23 PF13384.1 50 5.9e-13 41.5 0.6 1 2 1.9e-09 4.5e-08 26.0 0.0 5 49 9 54 6 55 0.89 # 14565 # 15086 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.462 1_21 - 174 HTH_23 PF13384.1 50 5.9e-13 41.5 0.6 2 2 2.8e-05 0.00066 12.8 0.4 3 50 64 113 62 113 0.90 # 14565 # 15086 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.462 1_49 - 341 HTH_23 PF13384.1 50 1.2e-08 27.9 0.0 1 1 1.5e-09 3.6e-08 26.3 0.0 9 40 9 40 2 43 0.89 # 41876 # 42898 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 3_25 - 119 HTH_23 PF13384.1 50 8.7e-08 25.1 0.1 1 1 7.1e-09 1.7e-07 24.2 0.1 9 39 9 39 8 40 0.92 # 18184 # 18540 # 1 # ID=3_25;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 1_17 - 653 HTH_23 PF13384.1 50 6.6e-06 19.1 0.0 1 1 4.4e-06 0.0001 15.3 0.0 13 40 149 176 143 180 0.91 # 11242 # 13200 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.583 7_1 - 241 HTH_23 PF13384.1 50 9.4e-06 18.6 0.7 1 2 0.098 2.3 1.5 0.0 7 27 17 41 13 42 0.69 # 53 # 775 # -1 # ID=7_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 7_1 - 241 HTH_23 PF13384.1 50 9.4e-06 18.6 0.7 2 2 1.2e-05 0.00027 14.0 0.1 28 42 47 61 46 68 0.87 # 53 # 775 # -1 # ID=7_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 3_1 - 146 HTH_23 PF13384.1 50 0.00049 13.2 0.0 1 1 4.7e-05 0.0011 12.1 0.0 22 43 72 93 66 113 0.86 # 3 # 440 # 1 # ID=3_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.534 1_49 - 341 HTH_7 PF02796.10 45 3.6e-11 36.2 0.3 1 1 1.4e-12 9.6e-11 34.9 0.3 13 44 9 40 5 41 0.93 # 41876 # 42898 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 3_25 - 119 HTH_7 PF02796.10 45 2.2e-06 20.9 0.2 1 1 6.1e-08 4.3e-06 20.0 0.2 7 42 3 38 1 40 0.91 # 18184 # 18540 # 1 # ID=3_25;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 1_49 - 341 HTH_19 PF12844.2 64 2.2e-05 17.9 0.0 1 1 2.7e-07 3.8e-05 17.1 0.0 7 52 12 58 11 70 0.82 # 41876 # 42898 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 3_7 - 358 NB-ARC PF00931.17 287 0.001 11.3 0.0 1 1 2e-05 0.0028 9.9 0.0 12 37 20 45 15 49 0.82 # 3330 # 4403 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 3_7 - 358 Mg_chelatase PF01078.16 207 0.00014 14.5 0.0 1 1 1.8e-06 0.00025 13.6 0.0 14 84 19 89 6 102 0.79 # 3330 # 4403 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 5_5 - 102 FeoC PF09012.5 69 0.0013 11.8 0.0 1 1 1.4e-05 0.002 11.3 0.0 24 48 38 62 30 72 0.81 # 4405 # 4710 # -1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_21 - 174 HTH_29 PF13551.1 112 6.9e-13 42.2 0.3 1 2 6.4e-08 3e-06 20.8 0.0 16 76 26 81 11 88 0.82 # 14565 # 15086 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.462 1_21 - 174 HTH_29 PF13551.1 112 6.9e-13 42.2 0.3 2 2 1e-08 4.9e-07 23.3 0.3 1 76 68 145 68 167 0.78 # 14565 # 15086 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.462 1_49 - 341 HTH_29 PF13551.1 112 3.5e-06 20.6 0.0 1 1 2.4e-07 1.1e-05 18.9 0.0 6 35 12 40 8 102 0.73 # 41876 # 42898 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 3_25 - 119 HTH_29 PF13551.1 112 0.00014 15.4 0.0 1 1 5.2e-06 0.00024 14.6 0.0 8 34 14 39 8 51 0.84 # 18184 # 18540 # 1 # ID=3_25;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 4_14 - 426 NAD_binding_9 PF13454.1 156 4.9e-09 29.5 0.0 1 3 5.8e-08 8.1e-06 19.1 0.0 3 155 10 151 7 152 0.68 # 11619 # 12896 # 1 # ID=4_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 4_14 - 426 NAD_binding_9 PF13454.1 156 4.9e-09 29.5 0.0 2 3 0.02 2.8 1.1 0.0 2 31 186 214 185 229 0.79 # 11619 # 12896 # 1 # ID=4_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 4_14 - 426 NAD_binding_9 PF13454.1 156 4.9e-09 29.5 0.0 3 3 0.00086 0.12 5.5 0.0 116 155 287 332 254 333 0.73 # 11619 # 12896 # 1 # ID=4_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 1_13 - 188 Met_10 PF02475.11 200 0.00026 14.0 0.0 1 1 2.5e-06 0.00035 13.6 0.0 94 189 43 132 29 145 0.81 # 8885 # 9448 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.592 4_15 - 733 Plug PF07715.10 108 5.7e-20 65.1 2.2 1 1 4.8e-22 6.8e-20 64.9 0.6 3 107 44 145 42 146 0.94 # 12981 # 15179 # 1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.547 7_1 - 241 DDE_Tnp_IS66 PF03050.9 271 1.6e-12 40.5 0.3 1 1 1.5e-14 2.1e-12 40.2 0.3 5 132 16 150 12 180 0.87 # 53 # 775 # -1 # ID=7_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 6_5 - 246 Methyltransf_31 PF13847.1 152 1.5e-07 24.5 0.1 1 1 3.1e-09 2.2e-07 24.0 0.1 2 76 28 97 27 213 0.87 # 3538 # 4275 # -1 # ID=6_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 1_13 - 188 Methyltransf_31 PF13847.1 152 2.8e-07 23.6 0.0 1 1 4.9e-09 3.5e-07 23.3 0.0 5 119 52 162 48 183 0.84 # 8885 # 9448 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.592 3_7 - 358 Arch_ATPase PF01637.13 234 0.00033 13.8 0.0 1 1 7e-06 0.00049 13.2 0.0 8 39 17 46 11 62 0.80 # 3330 # 4403 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 1_48 - 260 Arch_ATPase PF01637.13 234 0.0013 11.8 0.1 1 1 6.9e-05 0.0049 9.9 0.0 8 37 90 119 87 140 0.79 # 41097 # 41876 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_48 - 260 PhoH PF02562.11 205 1.2e-07 24.5 0.2 1 2 0.064 9 -1.2 0.0 62 108 19 64 2 76 0.61 # 41097 # 41876 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_48 - 260 PhoH PF02562.11 205 1.2e-07 24.5 0.2 2 2 3.6e-09 5e-07 22.5 0.0 11 48 94 131 83 159 0.83 # 41097 # 41876 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_48 - 260 AAA_5 PF07728.9 139 4.2e-05 16.7 0.3 1 1 7.2e-06 0.00051 13.2 0.2 1 74 104 173 104 180 0.72 # 41097 # 41876 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 3_7 - 358 AAA_5 PF07728.9 139 5.6e-05 16.3 0.2 1 1 2e-06 0.00014 15.0 0.0 2 22 30 50 29 69 0.87 # 3330 # 4403 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 1_48 - 260 ResIII PF04851.10 184 0.00052 13.2 0.0 1 2 6.9e-05 0.0098 9.1 0.0 8 50 89 127 50 135 0.78 # 41097 # 41876 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_48 - 260 ResIII PF04851.10 184 0.00052 13.2 0.0 2 2 0.0077 1.1 2.4 0.0 112 163 131 181 125 203 0.72 # 41097 # 41876 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_41 - 730 TrwB_AAD_bind PF10412.4 386 3.1e-150 493.4 0.0 1 1 2.7e-152 3.8e-150 493.1 0.0 2 386 172 561 171 561 0.99 # 30433 # 32622 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 2_5 - 389 TIGR01968 TIGR01968 261 6.2e-08 25.3 0.1 1 2 2.6e-06 0.00037 13.0 0.0 3 37 108 142 106 145 0.93 # 3672 # 4838 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 2_5 - 389 TIGR01968 TIGR01968 261 6.2e-08 25.3 0.1 2 2 1.5e-05 0.0022 10.4 0.0 104 145 227 268 215 340 0.81 # 3672 # 4838 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 3_7 - 358 AAA_18 PF13238.1 129 3.9e-05 17.4 0.0 1 1 9e-07 0.00013 15.7 0.0 1 22 30 51 30 139 0.77 # 3330 # 4403 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 2_20 - 522 TIGR00611 TIGR00611 365 8.9e-09 27.9 2.7 1 3 2.2e-10 3.1e-08 26.2 0.0 3 56 4 57 2 79 0.92 # 17832 # 19397 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 2_20 - 522 TIGR00611 TIGR00611 365 8.9e-09 27.9 2.7 2 3 0.04 5.7 -1.0 0.1 322 345 297 319 270 330 0.72 # 17832 # 19397 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 2_20 - 522 TIGR00611 TIGR00611 365 8.9e-09 27.9 2.7 3 3 0.02 2.9 -0.0 0.2 150 191 453 493 402 508 0.46 # 17832 # 19397 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 1_21 - 174 HTH_psq PF05225.11 45 0.00061 12.8 0.2 1 2 0.018 2.6 1.1 0.0 23 31 29 37 28 37 0.87 # 14565 # 15086 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.462 1_21 - 174 HTH_psq PF05225.11 45 0.00061 12.8 0.2 2 2 7e-05 0.0099 8.9 0.1 10 26 73 89 72 89 0.85 # 14565 # 15086 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.462 1_13 - 188 Methyltransf_12 PF08242.7 99 2.9e-05 17.9 0.0 1 1 3.7e-07 5.2e-05 17.1 0.0 1 99 55 144 55 144 0.84 # 8885 # 9448 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.592 1_13 - 188 Methyltrans_SAM PF10672.4 286 0.0015 10.8 0.0 1 1 1.5e-05 0.0021 10.3 0.0 197 261 114 173 105 180 0.78 # 8885 # 9448 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.592 3_7 - 358 DUF258 PF03193.11 161 2.7e-07 23.3 0.0 1 1 1.1e-08 5e-07 22.4 0.0 26 77 17 69 3 83 0.79 # 3330 # 4403 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 1_48 - 260 DUF258 PF03193.11 161 1.8e-05 17.4 0.0 1 1 5.9e-07 2.8e-05 16.8 0.0 21 78 88 157 70 192 0.71 # 41097 # 41876 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 4_3 - 276 DUF258 PF03193.11 161 0.00034 13.2 0.1 1 1 1.3e-05 0.00061 12.4 0.1 25 67 22 65 2 71 0.79 # 1341 # 2168 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_21 - 174 HTH_28 PF13518.1 52 6.1e-25 80.3 0.3 1 2 2.3e-13 8.2e-12 38.4 0.0 1 50 10 60 10 61 0.93 # 14565 # 15086 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.462 1_21 - 174 HTH_28 PF13518.1 52 6.1e-25 80.3 0.3 2 2 8.3e-14 2.9e-12 39.8 0.2 2 47 68 115 67 121 0.93 # 14565 # 15086 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.462 1_49 - 341 HTH_28 PF13518.1 52 6.7e-08 25.9 0.1 1 1 4.9e-09 1.7e-07 24.6 0.1 7 34 12 39 8 40 0.89 # 41876 # 42898 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 7_1 - 241 HTH_28 PF13518.1 52 8e-05 16.0 1.1 1 1 9.7e-06 0.00034 14.0 1.1 22 36 46 60 19 61 0.76 # 53 # 775 # -1 # ID=7_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 3_25 - 119 HTH_28 PF13518.1 52 0.00059 13.3 0.1 1 1 3.7e-05 0.0013 12.2 0.1 14 34 19 39 8 40 0.74 # 18184 # 18540 # 1 # ID=3_25;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 5_5 - 102 HTH_12 PF08461.5 66 3.8e-06 20.0 0.7 1 1 4.3e-08 6.1e-06 19.3 0.7 6 65 15 82 12 83 0.77 # 4405 # 4710 # -1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_49 - 341 HTH_24 PF13412.1 48 6.3e-07 22.2 0.1 1 1 2.3e-08 1.1e-06 21.4 0.1 10 40 11 40 10 43 0.89 # 41876 # 42898 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 3_14 - 251 HTH_24 PF13412.1 48 0.00085 12.1 0.0 1 1 4.1e-05 0.0019 11.0 0.0 7 42 14 49 10 51 0.90 # 10310 # 11062 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.494 3_25 - 119 HTH_24 PF13412.1 48 0.0012 11.7 0.0 1 1 5.3e-05 0.0025 10.6 0.0 21 39 21 39 20 40 0.94 # 18184 # 18540 # 1 # ID=3_25;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 1_49 - 341 HTH_30 PF13556.1 59 0.00013 15.0 0.0 1 1 1.9e-06 0.00027 13.9 0.0 10 34 15 39 10 43 0.86 # 41876 # 42898 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 1_13 - 188 TIGR03533 TIGR03533 284 5e-05 15.8 0.0 1 1 5.4e-07 7.7e-05 15.2 0.0 118 210 47 133 37 141 0.88 # 8885 # 9448 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.592 1_13 - 188 TIGR03534 TIGR03534 253 6.5e-08 25.4 0.0 1 1 1.1e-09 7.7e-08 25.1 0.0 80 175 44 131 12 148 0.88 # 8885 # 9448 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.592 6_5 - 246 TIGR03534 TIGR03534 253 9.3e-07 21.6 0.0 1 1 2.5e-08 1.7e-06 20.7 0.0 73 166 14 103 12 119 0.80 # 3538 # 4275 # -1 # ID=6_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 5_5 - 102 FUR PF01475.14 120 2.8e-05 17.4 0.0 1 1 2.1e-07 2.9e-05 17.4 0.0 29 74 29 77 12 99 0.79 # 4405 # 4710 # -1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_49 - 341 HTH_10 PF04967.7 53 0.00033 13.7 0.0 1 1 4.4e-06 0.00062 12.8 0.0 24 45 18 39 15 43 0.89 # 41876 # 42898 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 4_14 - 426 TIGR01292 TIGR01292 300 0.0012 10.7 0.0 1 2 0.0001 0.015 7.2 0.0 57 111 97 152 91 157 0.80 # 11619 # 12896 # 1 # ID=4_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 4_14 - 426 TIGR01292 TIGR01292 300 0.0012 10.7 0.0 2 2 0.013 1.8 0.3 0.0 141 178 181 222 178 232 0.65 # 11619 # 12896 # 1 # ID=4_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 4_3 - 276 MMR_HSR1 PF01926.18 116 0.00052 13.4 0.5 1 1 1.3e-05 0.0009 12.6 0.5 2 21 36 55 35 200 0.75 # 1341 # 2168 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 3_7 - 358 MMR_HSR1 PF01926.18 116 0.00066 13.1 0.0 1 1 1.7e-05 0.0012 12.2 0.0 2 21 30 49 29 84 0.82 # 3330 # 4403 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 3_7 - 358 Miro PF08477.8 119 0.00017 15.5 0.0 1 1 2.9e-06 0.00041 14.3 0.0 2 30 30 61 30 93 0.76 # 3330 # 4403 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 1_49 - 341 HTH_31 PF13560.1 64 3.9e-05 17.2 0.0 1 1 1.4e-06 9.7e-05 16.0 0.0 12 54 15 60 13 61 0.85 # 41876 # 42898 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 2_5 - 389 HTH_31 PF13560.1 64 0.00018 15.1 0.4 1 1 7.6e-06 0.00054 13.6 0.2 12 45 37 69 31 73 0.87 # 3672 # 4838 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 6_5 - 246 Methyltransf_32 PF13679.1 141 1.7e-05 17.9 0.0 1 1 1.9e-07 2.7e-05 17.3 0.0 12 70 17 68 9 121 0.82 # 3538 # 4275 # -1 # ID=6_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 1_42 - 1757 UvrD_C_2 PF13538.1 104 1.8e-07 24.7 0.7 1 2 0.026 1.8 2.2 0.0 6 44 1227 1265 1223 1295 0.74 # 32622 # 37892 # 1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 1_42 - 1757 UvrD_C_2 PF13538.1 104 1.8e-07 24.7 0.7 2 2 8.4e-08 5.9e-06 19.8 0.2 3 102 1341 1444 1339 1446 0.77 # 32622 # 37892 # 1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 2_21 - 341 UvrD_C_2 PF13538.1 104 0.00011 15.8 0.0 1 1 3e-06 0.00021 14.8 0.0 37 103 247 329 224 330 0.65 # 19382 # 20404 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.541 6_5 - 246 TIGR00755 TIGR00755 256 2.3e-44 144.7 2.8 1 1 3.9e-46 2.7e-44 144.4 2.8 5 227 5 221 1 235 0.88 # 3538 # 4275 # -1 # ID=6_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 1_13 - 188 TIGR00755 TIGR00755 256 2.4e-08 26.6 0.0 1 1 4.5e-10 3.2e-08 26.2 0.0 8 105 29 123 25 134 0.88 # 8885 # 9448 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.592 3_25 - 119 HTH_36 PF13730.1 55 0.00045 13.8 0.0 1 1 5.7e-06 0.00081 12.9 0.0 28 47 20 39 3 40 0.88 # 18184 # 18540 # 1 # ID=3_25;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 3_7 - 358 NACHT PF05729.7 166 0.00029 13.9 0.1 1 1 4.3e-06 0.00061 12.9 0.1 3 21 30 48 28 50 0.89 # 3330 # 4403 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 3_7 - 358 AAA_17 PF13207.1 121 9.6e-07 23.1 0.0 1 1 3.2e-08 2.3e-06 21.9 0.0 2 60 30 118 29 182 0.54 # 3330 # 4403 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 1_41 - 730 AAA_17 PF13207.1 121 0.00045 14.4 0.0 1 1 2e-05 0.0014 12.9 0.0 3 27 189 217 187 284 0.70 # 30433 # 32622 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 3_7 - 358 TIGR02211 TIGR02211 221 9.2e-44 142.6 0.0 1 1 1.6e-45 1.1e-43 142.3 0.0 3 218 3 209 1 212 0.91 # 3330 # 4403 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 4_3 - 276 TIGR02211 TIGR02211 221 5.8e-25 81.1 0.0 1 1 1.2e-26 8.2e-25 80.6 0.0 19 212 21 212 7 221 0.84 # 1341 # 2168 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 3_7 - 358 AAA_25 PF13481.1 194 2.9e-05 16.9 0.3 1 1 2.5e-06 0.00012 14.9 0.0 30 54 24 48 11 75 0.83 # 3330 # 4403 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 1_48 - 260 AAA_25 PF13481.1 194 3.6e-05 16.6 0.0 1 1 1.2e-06 5.8e-05 15.9 0.0 22 58 90 127 71 183 0.79 # 41097 # 41876 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 4_3 - 276 AAA_25 PF13481.1 194 0.00092 12.0 0.1 1 1 6.5e-05 0.0031 10.3 0.1 30 57 30 57 23 87 0.85 # 1341 # 2168 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 2_21 - 341 Viral_helicase1 PF01443.13 234 9.1e-12 38.3 0.1 1 2 3.9e-07 2.7e-05 17.1 0.0 2 30 5 38 4 59 0.76 # 19382 # 20404 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.541 2_21 - 341 Viral_helicase1 PF01443.13 234 9.1e-12 38.3 0.1 2 2 1.4e-07 1e-05 18.5 0.1 63 233 133 330 122 331 0.67 # 19382 # 20404 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.541 1_42 - 1757 Viral_helicase1 PF01443.13 234 0.00043 13.2 0.1 1 2 0.00051 0.036 6.9 0.0 1 23 988 1012 988 1192 0.71 # 32622 # 37892 # 1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 1_42 - 1757 Viral_helicase1 PF01443.13 234 0.00043 13.2 0.1 2 2 0.0067 0.47 3.3 0.0 170 234 1386 1447 1342 1447 0.61 # 32622 # 37892 # 1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 6_5 - 246 DOT1 PF08123.8 205 4.6e-05 16.2 0.2 1 1 8.2e-07 0.00011 14.9 0.0 28 88 15 73 11 100 0.79 # 3538 # 4275 # -1 # ID=6_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 2_20 - 522 AAA_15 PF13175.1 415 4.7e-17 55.4 0.1 1 2 5.1e-09 2.4e-07 23.5 0.0 2 45 5 47 4 63 0.90 # 17832 # 19397 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 2_20 - 522 AAA_15 PF13175.1 415 4.7e-17 55.4 0.1 2 2 5e-11 2.3e-09 30.1 0.1 332 414 235 318 183 319 0.74 # 17832 # 19397 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 4_3 - 276 AAA_15 PF13175.1 415 2.8e-07 23.2 0.0 1 2 4.5e-05 0.0021 10.5 0.0 23 42 34 53 19 86 0.82 # 1341 # 2168 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 4_3 - 276 AAA_15 PF13175.1 415 2.8e-07 23.2 0.0 2 2 3.6e-05 0.0017 10.8 0.0 370 410 160 200 151 202 0.91 # 1341 # 2168 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 3_7 - 358 AAA_15 PF13175.1 415 1.2e-06 21.1 0.0 1 2 0.0013 0.06 5.7 0.0 19 42 23 47 5 103 0.80 # 3330 # 4403 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 3_7 - 358 AAA_15 PF13175.1 415 1.2e-06 21.1 0.0 2 2 5e-06 0.00024 13.6 0.0 372 411 152 191 143 193 0.93 # 3330 # 4403 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 1_48 - 260 RuvB_N PF05496.7 234 0.00047 12.6 0.0 1 1 6.5e-06 0.00091 11.7 0.0 50 119 102 182 92 190 0.65 # 41097 # 41876 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_48 - 260 AAA_14 PF13173.1 128 1.6e-06 21.4 0.0 1 1 4.5e-08 3.2e-06 20.5 0.0 2 96 102 203 101 221 0.67 # 41097 # 41876 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 3_7 - 358 AAA_14 PF13173.1 128 0.00015 15.1 0.0 1 1 5.2e-06 0.00036 13.8 0.0 2 24 27 49 26 90 0.77 # 3330 # 4403 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 2_5 - 389 VirC1 PF07015.6 231 9.3e-05 14.9 0.1 1 2 0.00028 0.04 6.3 0.0 4 42 109 147 107 154 0.91 # 3672 # 4838 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 2_5 - 389 VirC1 PF07015.6 231 9.3e-05 14.9 0.1 2 2 0.0003 0.042 6.2 0.1 84 139 235 290 222 312 0.77 # 3672 # 4838 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 5_5 - 102 Penicillinase_R PF03965.11 115 3.6e-05 17.3 0.0 1 1 2.8e-07 4e-05 17.1 0.0 22 58 28 67 13 99 0.81 # 4405 # 4710 # -1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_49 - 341 HTH_Tnp_ISL3 PF13542.1 52 2.9e-05 16.6 0.1 1 1 1.5e-06 0.00011 14.8 0.0 21 49 11 39 2 40 0.82 # 41876 # 42898 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 3_25 - 119 HTH_Tnp_ISL3 PF13542.1 52 0.00018 14.1 0.0 1 1 6.2e-06 0.00044 12.9 0.0 31 49 21 39 20 40 0.90 # 18184 # 18540 # 1 # ID=3_25;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 1_21 - 174 DUF1153 PF06627.6 90 8.8e-08 25.4 0.1 1 2 0.00077 0.11 5.9 0.0 58 81 31 54 20 57 0.87 # 14565 # 15086 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.462 1_21 - 174 DUF1153 PF06627.6 90 8.8e-08 25.4 0.1 2 2 2e-07 2.8e-05 17.4 0.2 39 86 69 117 66 121 0.89 # 14565 # 15086 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.462 2_5 - 389 MerR PF00376.18 38 5.3e-07 22.6 0.0 1 1 1.8e-08 1.2e-06 21.4 0.0 1 28 41 68 41 74 0.95 # 3672 # 4838 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 3_25 - 119 MerR PF00376.18 38 0.0013 11.8 3.0 1 2 0.00027 0.019 8.0 0.1 4 21 22 39 19 49 0.84 # 18184 # 18540 # 1 # ID=3_25;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 3_25 - 119 MerR PF00376.18 38 0.0013 11.8 3.0 2 2 0.0054 0.38 3.8 0.7 14 22 90 98 89 110 0.69 # 18184 # 18540 # 1 # ID=3_25;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 4_3 - 276 AAA_33 PF13671.1 143 1.1e-05 18.7 0.1 1 1 6.7e-07 4.7e-05 16.7 0.1 3 33 37 82 35 203 0.61 # 1341 # 2168 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 3_7 - 358 AAA_33 PF13671.1 143 1.3e-05 18.5 0.4 1 1 6.4e-07 4.5e-05 16.7 0.4 2 22 30 50 29 201 0.70 # 3330 # 4403 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 1_49 - 341 CENP-B_N PF04218.8 53 9.9e-05 15.2 0.1 1 1 1.3e-06 0.00018 14.3 0.1 20 47 15 42 2 43 0.83 # 41876 # 42898 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 3_7 - 358 ABC_ATPase PF09818.4 448 0.00085 11.3 1.2 1 2 0.0019 0.26 3.1 0.0 240 264 22 47 14 50 0.87 # 3330 # 4403 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 3_7 - 358 ABC_ATPase PF09818.4 448 0.00085 11.3 1.2 2 2 0.00015 0.021 6.7 0.3 378 418 172 212 131 222 0.90 # 3330 # 4403 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 4_3 - 276 SbcCD_C PF13558.1 90 9.5e-07 22.1 0.0 1 1 4.8e-08 6.7e-06 19.4 0.0 26 89 136 186 119 187 0.79 # 1341 # 2168 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_41 - 730 T4SS-DNA_transf PF02534.9 469 1e-09 30.8 0.0 1 1 2e-11 2.8e-09 29.4 0.0 264 361 382 476 198 500 0.83 # 30433 # 32622 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_13 - 188 MTS PF05175.9 170 3.2e-09 29.8 0.0 1 1 6.3e-11 4.4e-09 29.3 0.0 24 141 45 149 41 166 0.85 # 8885 # 9448 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.592 6_5 - 246 MTS PF05175.9 170 8.7e-08 25.1 0.0 1 1 2e-09 1.4e-07 24.4 0.0 24 118 22 113 9 121 0.85 # 3538 # 4275 # -1 # ID=6_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 3_7 - 358 RNA_helicase PF00910.17 107 0.00067 13.3 0.0 1 1 1.1e-05 0.0016 12.1 0.0 1 19 30 48 30 73 0.91 # 3330 # 4403 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 6_5 - 246 Methyltransf_23 PF13489.1 161 1.4e-06 21.5 0.1 1 1 2.9e-08 4.1e-06 20.0 0.1 7 60 16 85 9 225 0.83 # 3538 # 4275 # -1 # ID=6_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 1_48 - 260 NTPase_1 PF03266.10 168 0.00033 13.8 0.1 1 2 0.0016 0.23 4.5 0.1 2 30 105 133 104 153 0.83 # 41097 # 41876 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_48 - 260 NTPase_1 PF03266.10 168 0.00033 13.8 0.1 2 2 0.00025 0.035 7.2 0.0 88 112 157 181 144 204 0.72 # 41097 # 41876 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_49 - 341 GcrA PF07750.6 162 0.00016 15.3 0.0 1 1 2.4e-06 0.00034 14.2 0.0 6 36 5 34 2 51 0.93 # 41876 # 42898 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 8_1 - 168 DDE_Tnp_IS1 PF03400.8 131 1.4e-79 257.9 0.8 1 1 2.4e-81 1.7e-79 257.7 0.8 1 131 37 167 37 167 0.99 # 16 # 519 # -1 # ID=8_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.548 1_31 - 168 DDE_Tnp_IS1 PF03400.8 131 3.4e-76 247.0 1.7 1 1 5.8e-78 4.1e-76 246.8 1.7 1 131 37 167 37 167 0.99 # 21913 # 22416 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.538 1_28 - 226 Phage_antitermQ PF06530.7 126 0.0011 12.0 0.1 1 1 1.2e-05 0.0017 11.3 0.1 58 110 141 193 136 201 0.83 # 20186 # 20863 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.316 7_1 - 241 DDE_Tnp_IS240 PF13610.1 140 2.6e-52 169.9 0.0 1 1 7.7e-54 3.6e-52 169.4 0.0 4 139 81 218 79 219 0.99 # 53 # 775 # -1 # ID=7_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_22 - 284 DDE_Tnp_IS240 PF13610.1 140 7.8e-12 38.7 0.0 1 1 3e-13 1.4e-11 37.9 0.0 2 137 123 261 122 264 0.92 # 15083 # 15934 # 1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.428 3_3 - 149 DDE_Tnp_IS240 PF13610.1 140 4.8e-06 20.0 0.0 1 1 1.3e-07 6.2e-06 19.6 0.0 24 137 5 120 3 122 0.89 # 882 # 1328 # 1 # ID=3_3;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.515 1_49 - 341 HTH_26 PF13443.1 63 2.4e-06 21.1 0.0 1 1 3.4e-08 4.7e-06 20.2 0.0 4 41 11 48 10 58 0.90 # 41876 # 42898 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 3_7 - 358 PduV-EutP PF10662.4 143 0.0013 11.7 0.1 1 1 2.1e-05 0.003 10.5 0.0 4 25 30 51 28 68 0.90 # 3330 # 4403 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 2_20 - 522 TIGR00634 TIGR00634 563 0.00032 12.7 0.2 1 1 4.2e-06 0.00059 11.9 0.0 1 46 3 48 3 69 0.93 # 17832 # 19397 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 3_25 - 119 HTH_17 PF12728.2 51 0.00038 14.1 1.4 1 2 3.1e-05 0.0022 11.7 0.0 6 41 22 56 20 65 0.77 # 18184 # 18540 # 1 # ID=3_25;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 3_25 - 119 HTH_17 PF12728.2 51 0.00038 14.1 1.4 2 2 0.057 4 1.2 0.4 14 34 88 109 82 116 0.81 # 18184 # 18540 # 1 # ID=3_25;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 1_49 - 341 HTH_17 PF12728.2 51 0.0017 12.1 0.9 1 1 5e-05 0.0036 11.0 0.1 6 26 22 43 18 86 0.88 # 41876 # 42898 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 6_1 - 511 Zn-ribbon_8 PF09723.5 42 0.0055 10.1 6.7 1 2 0.0015 0.21 5.1 4.6 8 35 84 109 83 114 0.87 # 398 # 1930 # -1 # ID=6_1;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.693 6_1 - 511 Zn-ribbon_8 PF09723.5 42 0.0055 10.1 6.7 2 2 0.0027 0.39 4.2 0.0 22 38 454 469 447 473 0.76 # 398 # 1930 # -1 # ID=6_1;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.693 1_49 - 341 HTH_11 PF08279.7 55 2.1e-06 20.8 0.1 1 1 7.1e-08 5e-06 19.5 0.1 8 37 12 39 5 40 0.80 # 41876 # 42898 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 3_25 - 119 HTH_11 PF08279.7 55 2.4e-05 17.3 0.0 1 1 7e-07 4.9e-05 16.4 0.0 18 37 20 39 5 40 0.80 # 18184 # 18540 # 1 # ID=3_25;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 3_25 - 119 Sigma70_ECF PF07638.6 185 0.00034 13.7 0.0 1 1 3.8e-06 0.00053 13.1 0.0 143 174 9 40 2 52 0.86 # 18184 # 18540 # 1 # ID=3_25;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 3_14 - 251 MarR_2 PF12802.2 62 0.0012 11.9 0.0 1 1 2.4e-05 0.0034 10.5 0.0 8 53 13 56 10 60 0.89 # 10310 # 11062 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.494 3_14 - 251 TrmB PF01978.14 68 6.4e-05 16.0 0.0 1 1 2.7e-06 0.00013 15.1 0.0 12 60 14 62 11 68 0.89 # 10310 # 11062 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.494 5_5 - 102 TrmB PF01978.14 68 0.00035 13.7 0.1 1 1 2.2e-05 0.001 12.2 0.1 34 62 40 73 31 78 0.84 # 4405 # 4710 # -1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_49 - 341 TrmB PF01978.14 68 0.00036 13.6 0.0 1 1 1.7e-05 0.00079 12.5 0.0 16 44 11 39 10 40 0.93 # 41876 # 42898 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 5_1 - 302 LYTB PF02401.13 281 0.00097 11.5 0.0 1 1 2e-05 0.0028 9.9 0.0 236 272 81 117 70 124 0.91 # 197 # 1102 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.656 3_25 - 119 LacI PF00356.16 46 0.00038 13.5 0.0 1 1 5.9e-06 0.00083 12.4 0.0 2 34 20 52 19 62 0.91 # 18184 # 18540 # 1 # ID=3_25;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 2_20 - 522 DUF2813 PF11398.3 373 4.6e-05 16.0 1.2 1 2 4.6e-06 0.00065 12.2 0.0 11 49 12 51 3 56 0.79 # 17832 # 19397 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 2_20 - 522 DUF2813 PF11398.3 373 4.6e-05 16.0 1.2 2 2 0.0067 0.94 1.8 0.0 287 333 279 326 250 333 0.82 # 17832 # 19397 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 1_49 - 341 DUF1670 PF07900.6 220 0.0014 11.3 0.1 1 1 1.8e-05 0.0025 10.4 0.1 189 219 9 39 4 40 0.92 # 41876 # 42898 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 1_41 - 730 AAA_10 PF12846.2 304 1.9e-10 34.0 0.0 1 1 9.7e-11 3.4e-09 29.9 0.0 3 296 187 494 186 500 0.69 # 30433 # 32622 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_48 - 260 AAA_10 PF12846.2 304 1.1e-05 18.4 0.6 1 2 3.8e-06 0.00013 14.8 0.1 1 33 102 134 102 171 0.89 # 41097 # 41876 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_48 - 260 AAA_10 PF12846.2 304 1.1e-05 18.4 0.6 2 2 0.097 3.4 0.3 0.0 202 247 142 192 134 202 0.68 # 41097 # 41876 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 4_3 - 276 AAA_10 PF12846.2 304 0.00026 13.9 1.4 1 2 4e-05 0.0014 11.4 1.0 4 34 36 66 33 159 0.89 # 1341 # 2168 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 4_3 - 276 AAA_10 PF12846.2 304 0.00026 13.9 1.4 2 2 0.081 2.9 0.6 0.0 242 266 181 205 170 210 0.87 # 1341 # 2168 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 3_7 - 358 AAA_10 PF12846.2 304 0.00073 12.4 0.0 1 1 3.4e-05 0.0012 11.7 0.0 4 22 30 48 28 79 0.86 # 3330 # 4403 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 3_23 - 326 HTH_20 PF12840.2 61 0.00011 15.4 0.0 1 2 0.0029 0.1 5.9 0.0 24 47 102 125 97 125 0.89 # 16461 # 17438 # -1 # ID=3_23;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.522 3_23 - 326 HTH_20 PF12840.2 61 0.00011 15.4 0.0 2 2 0.0014 0.048 6.9 0.1 19 58 213 259 185 262 0.77 # 16461 # 17438 # -1 # ID=3_23;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.522 1_22 - 284 HTH_20 PF12840.2 61 0.00017 14.8 0.0 1 1 9.4e-06 0.00033 13.9 0.0 27 50 13 36 1 41 0.80 # 15083 # 15934 # 1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.428 1_49 - 341 HTH_20 PF12840.2 61 0.00054 13.2 0.0 1 1 3.3e-05 0.0012 12.1 0.0 19 46 13 39 10 40 0.89 # 41876 # 42898 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 3_14 - 251 HTH_20 PF12840.2 61 0.00065 12.9 0.0 1 1 4.7e-05 0.0017 11.6 0.0 13 48 13 48 11 58 0.88 # 10310 # 11062 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.494 6_5 - 246 PCMT PF01135.14 210 1.1e-06 21.7 0.0 1 1 1.6e-08 2.2e-06 20.7 0.0 58 122 14 75 2 87 0.83 # 3538 # 4275 # -1 # ID=6_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 6_5 - 246 RrnaAD PF00398.15 262 4.2e-74 242.2 6.7 1 1 6.6e-76 4.6e-74 242.1 6.7 3 261 2 242 1 243 0.96 # 3538 # 4275 # -1 # ID=6_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 1_13 - 188 RrnaAD PF00398.15 262 6.8e-08 25.2 0.0 1 1 1.2e-09 8.5e-08 24.9 0.0 9 113 29 128 24 148 0.87 # 8885 # 9448 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.592 1_13 - 188 Methyltransf_18 PF12847.2 112 2.2e-10 34.5 0.0 1 1 6.8e-12 4.8e-10 33.5 0.0 4 109 53 146 50 148 0.88 # 8885 # 9448 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.592 6_5 - 246 Methyltransf_18 PF12847.2 112 1.9e-09 31.5 0.0 1 1 3.9e-11 2.7e-09 31.0 0.0 2 74 30 98 29 153 0.87 # 3538 # 4275 # -1 # ID=6_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 6_5 - 246 Methyltransf_11 PF08241.7 95 8.4e-05 16.5 0.0 1 1 1.2e-06 0.00017 15.5 0.0 2 59 35 92 34 100 0.85 # 3538 # 4275 # -1 # ID=6_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 4_3 - 276 AAA_13 PF13166.1 712 0.0017 10.2 0.1 1 2 0.00076 0.11 4.2 0.2 23 36 40 53 29 66 0.83 # 1341 # 2168 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 4_3 - 276 AAA_13 PF13166.1 712 0.0017 10.2 0.1 2 2 0.001 0.15 3.8 0.0 529 572 162 203 152 210 0.90 # 1341 # 2168 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 2_5 - 389 ArsA_ATPase PF02374.10 305 2.5e-06 20.1 0.4 1 2 1.7e-06 0.00023 13.6 0.1 9 36 115 142 109 151 0.89 # 3672 # 4838 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 2_5 - 389 ArsA_ATPase PF02374.10 305 2.5e-06 20.1 0.4 2 2 0.0011 0.16 4.3 0.0 123 136 231 244 221 251 0.84 # 3672 # 4838 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 3_7 - 358 Septin PF00735.13 281 0.00019 13.9 0.0 1 1 2.5e-06 0.00035 13.0 0.0 7 92 30 117 26 131 0.83 # 3330 # 4403 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.619 2_5 - 389 AAA_31 PF13614.1 157 1.4e-09 31.5 0.0 1 2 1.4e-08 1.9e-06 21.3 0.0 2 49 108 155 107 195 0.91 # 3672 # 4838 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 2_5 - 389 AAA_31 PF13614.1 157 1.4e-09 31.5 0.0 2 2 0.00018 0.025 7.9 0.1 110 152 227 268 223 272 0.84 # 3672 # 4838 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 5_7 - 280 Pterin_bind PF00809.17 210 3.6e-58 189.7 0.0 1 1 3e-60 4.3e-58 189.5 0.0 1 210 7 216 7 216 0.98 # 6413 # 7252 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.617 4_14 - 426 FMO-like PF00743.14 532 3.9e-06 18.6 0.0 1 2 3.9e-06 0.00055 11.5 0.0 142 200 143 198 95 219 0.87 # 11619 # 12896 # 1 # ID=4_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 4_14 - 426 FMO-like PF00743.14 532 3.9e-06 18.6 0.0 2 2 0.00035 0.049 5.1 0.0 317 342 319 344 311 377 0.81 # 11619 # 12896 # 1 # ID=4_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 1_48 - 260 IstB_IS21 PF01695.12 178 6.4e-73 237.3 0.1 1 2 0.049 6.9 -0.6 0.0 64 97 25 57 24 61 0.64 # 41097 # 41876 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_48 - 260 IstB_IS21 PF01695.12 178 6.4e-73 237.3 0.1 2 2 9.8e-75 1.4e-72 236.2 0.1 1 178 56 235 56 235 0.98 # 41097 # 41876 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 3_11 - 297 DHDPS PF00701.17 289 3.6e-51 166.8 0.0 1 1 3e-53 4.2e-51 166.6 0.0 1 278 6 287 6 294 0.92 # 7971 # 8861 # 1 # ID=3_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 1_42 - 1757 AAA_11 PF13086.1 236 0.00026 14.0 3.4 1 1 2.1e-06 0.00029 13.8 0.0 2 75 969 1039 968 1059 0.81 # 32622 # 37892 # 1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 1_15 - 180 SSB PF00436.20 104 3.9e-41 132.6 0.4 1 1 3.5e-43 5e-41 132.2 0.4 1 101 6 109 6 112 0.96 # 10341 # 10880 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.593 4_14 - 426 Lycopene_cycl PF05834.7 374 3.9e-05 16.0 0.0 1 1 4.5e-07 6.4e-05 15.3 0.0 1 144 6 157 6 182 0.73 # 11619 # 12896 # 1 # ID=4_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 1_21 - 174 BrkDBD PF09607.5 58 0.0012 11.9 0.0 1 1 3.6e-05 0.005 9.8 0.0 11 47 11 44 2 51 0.80 # 14565 # 15086 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.462 3_2 - 153 HTH_21 PF13276.1 60 1.1e-18 60.5 8.2 1 2 0.06 4.2 0.9 0.0 14 31 4 21 2 31 0.81 # 440 # 898 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.542 3_2 - 153 HTH_21 PF13276.1 60 1.1e-18 60.5 8.2 2 2 2e-20 1.4e-18 60.1 3.6 2 60 46 103 44 103 0.92 # 440 # 898 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.542 1_22 - 284 HTH_21 PF13276.1 60 6e-17 54.9 4.2 1 2 8.5e-19 6e-17 54.9 4.2 6 60 43 96 38 97 0.90 # 15083 # 15934 # 1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.428 1_22 - 284 HTH_21 PF13276.1 60 6e-17 54.9 4.2 2 2 0.081 5.7 0.5 0.1 44 56 199 211 185 215 0.73 # 15083 # 15934 # 1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.428 6_5 - 246 TRM13 PF05206.9 259 0.00019 14.1 0.1 1 1 2.1e-06 0.0003 13.5 0.1 4 67 15 78 12 101 0.79 # 3538 # 4275 # -1 # ID=6_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/05d325e9-38a0-4082-b2f4-b3a6414991f7 # Target file: checkm_output/bins/pm667/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm667/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/05d325e9-38a0-4082-b2f4-b3a6414991f7 checkm_output/bins/pm667/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:11:50 2017 # [ok]