# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_4 - 349 rve_3 PF13683.1 67 8.8e-20 58.5 0.2 1 1 4.2e-20 1.7e-19 57.6 0.2 2 67 260 328 259 328 0.98 # 1389 # 2435 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.479 1_4 - 349 rve PF00665.21 120 6.2e-24 72.8 0.0 1 1 2.6e-24 1e-23 72.1 0.0 3 120 176 288 174 288 0.92 # 1389 # 2435 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.479 1_4 - 349 HTH_Tnp_1 PF01527.15 76 1.1e-05 13.8 0.1 1 1 6.6e-06 2.6e-05 12.6 0.1 26 57 45 77 30 106 0.77 # 1389 # 2435 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.479 1_4 - 349 rve_2 PF13333.1 52 4.8e-07 18.3 0.1 1 1 2.5e-07 1e-06 17.2 0.1 16 47 296 331 278 334 0.85 # 1389 # 2435 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.479 1_4 - 349 LZ_Tnp_IS481 PF13011.1 85 7.1e-05 11.6 2.8 1 1 2e-05 8.1e-05 11.4 0.4 24 65 41 82 35 102 0.84 # 1389 # 2435 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.479 1_4 - 349 HTH_Tnp_IS630 PF01710.11 120 1e-05 13.6 0.0 1 1 5.3e-06 2.1e-05 12.6 0.0 6 40 31 64 26 80 0.86 # 1389 # 2435 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.479 1_4 - 349 HTH_32 PF13565.1 77 2.4e-08 23.2 1.9 1 2 6e-09 2.4e-08 23.2 1.9 3 77 60 137 58 137 0.81 # 1389 # 2435 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.479 1_4 - 349 HTH_32 PF13565.1 77 2.4e-08 23.2 1.9 2 2 0.082 0.33 0.3 0.6 12 32 154 174 149 222 0.60 # 1389 # 2435 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.479 1_4 - 349 HTH_23 PF13384.1 50 1.9e-10 28.6 0.2 1 1 1.2e-10 4.7e-10 27.4 0.2 5 49 31 74 28 75 0.91 # 1389 # 2435 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.479 1_4 - 349 HTH_29 PF13551.1 112 6.4e-09 24.4 1.0 1 1 2.8e-09 1.1e-08 23.6 0.2 10 84 41 115 33 141 0.75 # 1389 # 2435 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.479 1_4 - 349 HTH_28 PF13518.1 52 1.4e-12 35.9 0.1 1 1 1.3e-12 5.3e-12 34.0 0.1 11 51 41 81 32 82 0.89 # 1389 # 2435 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.479 1_4 - 349 DDE_Tnp_IS240 PF13610.1 140 8.9e-07 17.3 0.0 1 1 3.9e-07 1.6e-06 16.6 0.0 16 140 194 321 183 321 0.84 # 1389 # 2435 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.479 1_4 - 349 HTH_17 PF12728.2 51 4.5e-05 12.1 1.3 1 2 6.7e-05 0.00027 9.6 0.1 7 26 48 70 45 90 0.72 # 1389 # 2435 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.479 1_4 - 349 HTH_17 PF12728.2 51 4.5e-05 12.1 1.3 2 2 0.056 0.23 0.3 0.2 15 43 130 165 129 166 0.62 # 1389 # 2435 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.479 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/04e8a401-136b-4b4c-b9e3-e2584e108bde # Target file: checkm_output/bins/pm627/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm627/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/04e8a401-136b-4b4c-b9e3-e2584e108bde checkm_output/bins/pm627/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:10:43 2017 # [ok]