# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_4 - 764 TraG-D_C PF12696.2 128 2.3e-07 21.3 0.2 1 1 2.8e-08 5.1e-07 20.1 0.2 1 88 437 524 437 554 0.82 # 3197 # 5488 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.499 1_4 - 764 TrwB_AAD_bind PF10412.4 386 7.2e-08 21.8 0.3 1 2 9.3e-05 0.0017 7.4 0.0 11 32 132 153 126 157 0.84 # 3197 # 5488 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.499 1_4 - 764 TrwB_AAD_bind PF10412.4 386 7.2e-08 21.8 0.3 2 2 5.3e-06 9.5e-05 11.5 0.1 247 332 440 525 427 555 0.88 # 3197 # 5488 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.499 1_4 - 764 AAA_10 PF12846.2 304 4.3e-06 16.8 1.0 1 1 7.3e-07 1.3e-05 15.2 0.9 2 287 137 501 136 514 0.62 # 3197 # 5488 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.499 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/c9994e90-daf2-4cae-a7a7-e3587098860c # Target file: checkm_output/bins/pm625/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm625/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/c9994e90-daf2-4cae-a7a7-e3587098860c checkm_output/bins/pm625/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:10:42 2017 # [ok]