# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_8 - 383 ABC_tran PF00005.22 137 2.3e-05 15.4 0.0 1 1 2.2e-06 4.5e-05 14.5 0.0 16 35 162 181 152 211 0.87 # 5788 # 6936 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_8 - 383 MobB PF03205.9 140 3.9e-06 17.3 0.0 1 2 0.017 0.35 1.3 0.0 14 60 61 108 61 127 0.88 # 5788 # 6936 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_8 - 383 MobB PF03205.9 140 3.9e-06 17.3 0.0 2 2 3.1e-06 6.5e-05 13.4 0.0 5 26 162 183 160 193 0.90 # 5788 # 6936 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_8 - 383 AAA_23 PF13476.1 202 4.6e-05 14.5 0.0 1 1 3.7e-06 7.7e-05 13.8 0.0 19 40 157 178 142 209 0.83 # 5788 # 6936 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_8 - 383 AAA_16 PF13191.1 185 6.1e-05 13.7 0.0 1 1 6.1e-06 0.00013 12.7 0.0 27 52 160 188 148 282 0.82 # 5788 # 6936 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_8 - 383 AAA_22 PF13401.1 131 2.1e-06 18.6 0.0 1 1 2.5e-07 5.2e-06 17.4 0.0 4 46 157 196 152 233 0.76 # 5788 # 6936 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_8 - 383 AAA_29 PF13555.1 62 8.1e-06 16.1 0.0 1 1 1.1e-06 2.4e-05 14.6 0.0 26 44 160 178 151 186 0.83 # 5788 # 6936 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_14 - 231 OB_NTP_bind PF07717.11 114 0.00011 12.7 0.0 1 1 7.8e-06 0.00016 12.2 0.0 24 83 28 97 16 158 0.79 # 12006 # 12698 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_5 - 195 DNA_pol3_delta PF06144.8 172 4.3e-07 20.3 0.0 1 1 3e-08 6.3e-07 19.7 0.0 35 99 92 152 74 179 0.80 # 3539 # 4123 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.403 1_8 - 383 AAA_18 PF13238.1 129 3.2e-06 18.2 0.0 1 1 3e-07 6.3e-06 17.3 0.0 2 42 161 197 161 230 0.83 # 5788 # 6936 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_17 - 235 DUF3810 PF12725.2 318 0.00018 11.1 0.8 1 1 1.4e-05 0.00029 10.4 0.8 90 174 106 189 95 194 0.86 # 14984 # 15688 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.506 1_8 - 383 DUF87 PF01935.12 229 0.00013 12.5 0.0 1 1 1.1e-05 0.00024 11.7 0.0 28 56 162 191 161 192 0.88 # 5788 # 6936 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_8 - 383 T2SE PF00437.15 272 1.7e-36 116.2 0.0 1 1 1.2e-37 2.5e-36 115.6 0.0 120 269 149 306 127 309 0.88 # 5788 # 6936 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_8 - 383 AAA_17 PF13207.1 121 3.9e-06 18.4 0.1 1 2 2.4e-06 5e-05 14.9 0.0 3 47 161 208 161 251 0.76 # 5788 # 6936 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_8 - 383 AAA_17 PF13207.1 121 3.9e-06 18.4 0.1 2 2 0.043 0.9 1.1 0.1 24 113 332 363 274 374 0.60 # 5788 # 6936 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_8 - 383 AAA_25 PF13481.1 194 4.1e-05 13.7 0.0 1 1 3.5e-06 7.4e-05 12.9 0.0 24 58 148 182 124 207 0.78 # 5788 # 6936 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_8 - 383 RNA_helicase PF00910.17 107 2e-05 15.5 0.0 1 1 1.9e-06 4e-05 14.5 0.0 2 28 161 187 160 205 0.83 # 5788 # 6936 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_8 - 383 ATP_bind_1 PF03029.12 238 9.8e-06 15.9 0.0 1 1 7.2e-07 1.5e-05 15.3 0.0 1 23 162 184 162 197 0.86 # 5788 # 6936 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_8 - 383 AAA_10 PF12846.2 304 0.00011 12.4 0.0 1 1 1e-05 0.00021 11.4 0.0 2 21 158 177 157 196 0.83 # 5788 # 6936 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/4f9746d4-ead6-4a19-847d-73c074e2836a # Target file: checkm_output/bins/pm621/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm621/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/4f9746d4-ead6-4a19-847d-73c074e2836a checkm_output/bins/pm621/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:10:34 2017 # [ok]