# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_8 - 523 DUF3584 PF12128.3 1201 9.3e-05 9.1 50.2 1 2 6.6e-06 5.3e-05 9.9 37.1 339 533 57 253 44 266 0.83 # 4876 # 6444 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.424 1_8 - 523 DUF3584 PF12128.3 1201 9.3e-05 9.1 50.2 2 2 0.0002 0.0016 5.0 5.2 642 725 296 376 272 450 0.43 # 4876 # 6444 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.424 1_7 - 146 AAA_23 PF13476.1 202 0.00018 11.2 4.5 1 1 2.5e-05 0.0002 11.0 4.5 128 202 45 131 13 135 0.55 # 4179 # 4616 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_7 - 146 TIGR02350 TIGR02350 596 3.3e-05 11.3 1.7 1 1 5e-06 4e-05 11.1 1.7 487 571 48 134 29 138 0.83 # 4179 # 4616 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/bb5a2cd4-cf0c-40a2-86f5-77d3ccc70cc7 # Target file: checkm_output/bins/pm560/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm560/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/bb5a2cd4-cf0c-40a2-86f5-77d3ccc70cc7 checkm_output/bins/pm560/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:09:01 2017 # [ok]