# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 3_5 - 232 ATP-synt_ab PF00006.20 215 0.0004 13.4 0.1 1 1 8.3e-06 0.0012 11.8 0.1 8 35 29 56 23 74 0.86 # 1766 # 2461 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_56 - 228 Cons_hypoth95 PF03602.10 183 2e-05 17.5 0.0 1 2 0.00041 0.061 6.1 0.0 112 146 18 54 8 81 0.66 # 45737 # 46420 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_56 - 228 Cons_hypoth95 PF03602.10 183 2e-05 17.5 0.0 2 2 4e-05 0.006 9.4 0.0 41 62 162 183 145 218 0.78 # 45737 # 46420 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_39 - 249 KaiC PF06745.8 227 0.00016 14.3 0.0 1 1 3.8e-06 0.00028 13.5 0.0 17 53 96 131 79 167 0.83 # 32685 # 33431 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 3_5 - 232 KaiC PF06745.8 227 0.00071 12.2 0.1 1 1 1.9e-05 0.0014 11.2 0.1 7 35 25 52 22 66 0.88 # 1766 # 2461 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_18 - 251 HTH_IclR PF09339.5 52 3.9e-11 35.9 0.0 1 1 9.1e-13 6.7e-11 35.1 0.0 1 50 8 56 8 58 0.97 # 14849 # 15601 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.494 3_2 - 162 HTH_IclR PF09339.5 52 2.1e-07 24.0 0.5 1 2 0.0052 0.39 3.9 0.1 10 42 11 43 10 44 0.82 # 785 # 1270 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 3_2 - 162 HTH_IclR PF09339.5 52 2.1e-07 24.0 0.5 2 2 1.7e-07 1.2e-05 18.3 0.0 16 38 66 88 61 91 0.87 # 785 # 1270 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 3_5 - 232 ABC_tran PF00005.22 137 3.6e-36 118.0 0.0 1 1 1.4e-37 5.1e-36 117.5 0.0 1 136 26 171 26 172 0.92 # 1766 # 2461 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_26 - 358 ABC_tran PF00005.22 137 7.6e-36 116.9 0.0 1 1 4.2e-37 1.6e-35 115.9 0.0 1 136 17 159 17 160 0.90 # 21508 # 22581 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 2_10 - 522 ABC_tran PF00005.22 137 0.00023 14.9 0.0 1 1 1.9e-05 0.0007 13.4 0.0 14 113 27 155 17 158 0.73 # 7309 # 8874 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 1_20 - 880 ABC_tran PF00005.22 137 0.0015 12.4 0.0 1 1 0.00012 0.0044 10.8 0.0 13 102 481 610 476 619 0.60 # 18327 # 20966 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 7_3 - 183 TIGR01173 TIGR01173 452 2.6e-08 26.2 0.2 1 1 2.5e-10 3.7e-08 25.7 0.2 390 430 109 149 100 158 0.89 # 1872 # 2420 # 1 # ID=7_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.494 1_56 - 228 TIGR00095 TIGR00095 194 0.00048 13.0 0.0 1 2 0.0016 0.24 4.2 0.0 124 138 20 34 9 79 0.75 # 45737 # 46420 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_56 - 228 TIGR00095 TIGR00095 194 0.00048 13.0 0.0 2 2 0.00024 0.036 6.8 0.0 53 86 164 199 155 218 0.77 # 45737 # 46420 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 3_2 - 162 HTH_AsnC-type PF13404.1 42 1.7e-06 21.0 1.3 1 3 0.0014 0.21 4.7 0.1 9 35 10 37 10 44 0.91 # 785 # 1270 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 3_2 - 162 HTH_AsnC-type PF13404.1 42 1.7e-06 21.0 1.3 2 3 2.8e-06 0.00041 13.4 0.1 12 35 63 86 60 87 0.84 # 785 # 1270 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 3_2 - 162 HTH_AsnC-type PF13404.1 42 1.7e-06 21.0 1.3 3 3 0.048 7.2 -0.2 0.0 30 40 108 118 108 118 0.88 # 785 # 1270 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 1_47 - 188 N6_Mtase PF02384.11 311 0.00023 13.8 0.0 1 2 1.6e-05 0.0024 10.4 0.0 28 64 32 68 21 83 0.87 # 39454 # 40017 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 1_47 - 188 N6_Mtase PF02384.11 311 0.00023 13.8 0.0 2 2 0.018 2.7 0.4 0.0 127 137 114 124 103 134 0.82 # 39454 # 40017 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 2_30 - 149 rve_3 PF13683.1 67 6.3e-13 41.6 0.0 1 1 6.7e-15 1e-12 41.0 0.0 7 58 70 121 65 130 0.89 # 24583 # 25029 # -1 # ID=2_30;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.510 1_39 - 249 Sigma54_activat PF00158.21 168 0.00016 14.6 0.0 1 1 1.9e-06 0.00029 13.8 0.0 20 52 96 128 82 185 0.82 # 32685 # 33431 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 2_26 - 358 Adeno_IVa2 PF02456.10 370 0.0015 10.6 0.0 1 1 2.2e-05 0.0033 9.5 0.0 90 116 30 53 5 72 0.75 # 21508 # 22581 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 1_25 - 107 FtsK_SpoIIIE PF01580.13 205 1.9e-06 20.9 0.0 1 1 4.6e-08 2.3e-06 20.7 0.0 9 66 41 100 34 103 0.81 # 22238 # 22558 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 1_20 - 880 FtsK_SpoIIIE PF01580.13 205 2.6e-05 17.2 0.2 1 2 6.1e-06 0.0003 13.7 0.0 39 63 476 504 463 507 0.84 # 18327 # 20966 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 1_20 - 880 FtsK_SpoIIIE PF01580.13 205 2.6e-05 17.2 0.2 2 2 0.054 2.7 0.8 0.0 75 166 530 625 529 634 0.75 # 18327 # 20966 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 3_5 - 232 FtsK_SpoIIIE PF01580.13 205 0.0002 14.4 0.0 1 1 1.1e-05 0.00057 12.9 0.0 37 60 35 58 14 77 0.81 # 1766 # 2461 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 3_2 - 162 HTH_40 PF14493.1 91 1.1e-05 19.1 1.1 1 1 1.2e-07 1.7e-05 18.5 0.2 9 65 63 119 56 143 0.81 # 785 # 1270 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 8_1 - 202 HTH_38 PF13936.1 44 7.5e-08 25.4 1.0 1 1 5.2e-09 2.6e-07 23.6 0.0 15 44 168 197 160 197 0.93 # 310 # 915 # 1 # ID=8_1;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.559 3_2 - 162 HTH_38 PF13936.1 44 2.5e-05 17.3 0.8 1 2 0.069 3.4 0.8 0.1 16 32 13 31 8 39 0.71 # 785 # 1270 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 3_2 - 162 HTH_38 PF13936.1 44 2.5e-05 17.3 0.8 2 2 3.2e-06 0.00016 14.7 0.1 13 39 60 87 42 89 0.87 # 785 # 1270 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 1_38 - 514 HTH_38 PF13936.1 44 0.00045 13.3 0.1 1 1 5e-05 0.0025 10.9 0.0 12 40 13 42 11 46 0.84 # 31129 # 32670 # 1 # ID=1_38;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.481 3_5 - 232 MobB PF03205.9 140 0.0004 13.6 0.0 1 1 1.9e-05 0.00072 12.8 0.0 3 20 39 56 37 108 0.84 # 1766 # 2461 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_39 - 249 MobB PF03205.9 140 0.00069 12.8 0.0 1 1 4.2e-05 0.0016 11.7 0.0 3 34 101 132 99 141 0.92 # 32685 # 33431 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_20 - 880 MobB PF03205.9 140 0.00093 12.4 0.1 1 1 0.00011 0.004 10.3 0.0 4 37 483 515 481 523 0.79 # 18327 # 20966 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 1_3 - 736 MobB PF03205.9 140 0.0014 11.8 0.0 1 1 8.5e-05 0.0032 10.7 0.0 7 34 192 219 188 225 0.89 # 2919 # 5126 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 2_11 - 341 UvrD-helicase PF00580.16 315 1.5e-08 27.7 0.1 1 2 5.9e-06 0.00088 12.0 0.1 16 69 4 49 2 78 0.83 # 8859 # 9881 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.541 2_11 - 341 UvrD-helicase PF00580.16 315 1.5e-08 27.7 0.1 2 2 2.6e-06 0.00039 13.2 0.0 242 294 115 170 96 174 0.86 # 8859 # 9881 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.541 3_2 - 162 MarR PF01047.17 59 3.3e-05 17.1 1.5 1 2 0.00062 0.093 6.0 0.2 9 41 10 43 8 44 0.84 # 785 # 1270 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 3_2 - 162 MarR PF01047.17 59 3.3e-05 17.1 1.5 2 2 3.4e-05 0.005 10.1 0.1 8 37 59 88 52 89 0.83 # 785 # 1270 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 2_31 - 153 Sigma54_DBD PF04552.8 160 0.00044 13.3 0.1 1 1 5.3e-06 0.00078 12.4 0.0 97 154 42 97 26 103 0.76 # 25013 # 25471 # -1 # ID=2_31;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.545 6_4 - 226 TetR_N PF00440.18 47 5.3e-20 64.4 0.1 1 2 6.9e-21 1e-18 60.2 0.0 2 47 19 64 18 64 0.97 # 3090 # 3767 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 6_4 - 226 TetR_N PF00440.18 47 5.3e-20 64.4 0.1 2 2 0.013 1.9 1.8 0.1 1 16 179 194 179 196 0.91 # 3090 # 3767 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 4_12 - 845 AAA_19 PF13245.1 76 8.3e-08 25.4 0.5 1 1 6.9e-09 3.4e-07 23.5 0.5 7 76 69 135 62 135 0.74 # 7578 # 10112 # -1 # ID=4_12;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.608 1_39 - 249 AAA_19 PF13245.1 76 0.00024 14.4 0.0 1 1 1.1e-05 0.00052 13.2 0.0 8 33 98 120 84 137 0.78 # 32685 # 33431 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 3_5 - 232 AAA_19 PF13245.1 76 0.00028 14.1 0.1 1 1 5.4e-05 0.0027 11.0 0.0 10 54 36 75 29 87 0.75 # 1766 # 2461 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_60 - 199 CbiA PF01656.18 195 8.5e-21 67.7 0.0 1 1 1.3e-22 9.8e-21 67.5 0.0 41 194 18 188 7 189 0.73 # 49663 # 50259 # -1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.464 1_39 - 249 CbiA PF01656.18 195 0.00011 15.1 0.1 1 1 2.9e-06 0.00021 14.2 0.1 5 30 104 129 101 136 0.91 # 32685 # 33431 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_56 - 228 MethyltransfD12 PF02086.10 260 0.00057 12.8 0.0 1 2 0.014 2 1.2 0.0 173 188 16 31 10 92 0.81 # 45737 # 46420 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_56 - 228 MethyltransfD12 PF02086.10 260 0.00057 12.8 0.0 2 2 4e-05 0.006 9.5 0.0 20 46 163 189 148 197 0.78 # 45737 # 46420 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 3_2 - 162 Sigma70_r4_2 PF08281.7 54 1.1e-08 27.9 0.6 1 2 1.9e-05 0.00069 12.6 0.0 27 51 20 44 18 47 0.90 # 785 # 1270 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 3_2 - 162 Sigma70_r4_2 PF08281.7 54 1.1e-08 27.9 0.6 2 2 1.1e-05 0.00042 13.3 0.1 25 45 67 87 62 90 0.87 # 785 # 1270 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 8_1 - 202 Sigma70_r4_2 PF08281.7 54 1.9e-06 20.8 0.0 1 1 1.6e-07 6e-06 19.2 0.0 17 44 165 191 165 199 0.86 # 310 # 915 # 1 # ID=8_1;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.559 1_38 - 514 Sigma70_r4_2 PF08281.7 54 2e-05 17.5 0.9 1 1 1.7e-06 6.3e-05 15.9 0.1 15 50 11 46 9 48 0.94 # 31129 # 32670 # 1 # ID=1_38;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.481 1_33 - 229 Sigma70_r4_2 PF08281.7 54 0.00083 12.3 0.0 1 1 3.6e-05 0.0013 11.7 0.0 17 48 158 188 150 194 0.79 # 26882 # 27568 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.358 1_62 - 252 Rep_3 PF01051.16 222 4.9e-50 163.6 0.0 1 1 3.7e-52 5.6e-50 163.4 0.0 3 222 16 242 14 242 0.91 # 51299 # 52054 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.474 2_30 - 149 rve PF00665.21 120 4.1e-20 65.6 0.0 1 1 1.4e-21 6.8e-20 64.9 0.0 28 119 2 92 1 93 0.97 # 24583 # 25029 # -1 # ID=2_30;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.510 1_38 - 514 rve PF00665.21 120 1.3e-18 60.7 0.0 1 1 5.7e-20 2.8e-18 59.6 0.0 2 119 137 268 136 269 0.96 # 31129 # 32670 # 1 # ID=1_38;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.481 9_1 - 241 rve PF00665.21 120 5.1e-13 42.7 0.1 1 2 0.044 2.2 1.9 0.0 78 102 33 55 10 60 0.83 # 3 # 725 # 1 # ID=9_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 9_1 - 241 rve PF00665.21 120 5.1e-13 42.7 0.1 2 2 1.9e-13 9.6e-12 38.6 0.0 9 119 81 188 76 189 0.89 # 3 # 725 # 1 # ID=9_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 2_10 - 522 AAA_23 PF13476.1 202 4.9e-12 40.0 0.0 1 1 4.8e-13 2.4e-11 37.8 0.0 1 53 6 58 6 115 0.85 # 7309 # 8874 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 3_5 - 232 AAA_23 PF13476.1 202 0.00074 13.3 0.0 1 1 2.1e-05 0.0011 12.8 0.0 19 39 36 56 18 94 0.84 # 1766 # 2461 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_26 - 358 AAA_23 PF13476.1 202 0.00091 13.0 0.0 1 1 2.8e-05 0.0014 12.4 0.0 14 37 21 45 2 49 0.78 # 21508 # 22581 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 1_47 - 188 Methyltransf_26 PF13659.1 117 3.8e-14 46.2 0.0 1 1 9e-16 6.7e-14 45.4 0.0 2 114 52 147 51 150 0.91 # 39454 # 40017 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 1_56 - 228 Methyltransf_26 PF13659.1 117 1.3e-11 38.1 0.0 1 2 4.1e-07 3.1e-05 17.5 0.0 57 114 7 71 2 74 0.69 # 45737 # 46420 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_56 - 228 Methyltransf_26 PF13659.1 117 1.3e-11 38.1 0.0 2 2 1.9e-07 1.4e-05 18.6 0.0 4 45 167 207 164 223 0.82 # 45737 # 46420 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_25 - 107 Zeta_toxin PF06414.7 201 0.0017 10.9 0.1 1 1 1.7e-05 0.0025 10.4 0.1 14 39 70 95 59 102 0.80 # 22238 # 22558 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 4_12 - 845 AAA_30 PF13604.1 196 1.3e-42 139.1 1.6 1 1 6e-44 4.5e-42 137.3 1.6 1 186 56 244 56 248 0.94 # 7578 # 10112 # -1 # ID=4_12;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.608 3_5 - 232 AAA_30 PF13604.1 196 0.00016 14.8 0.4 1 1 3.7e-06 0.00028 14.0 0.4 18 58 36 76 29 202 0.87 # 1766 # 2461 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_10 - 522 SMC_N PF02463.14 220 3.7e-11 36.1 0.0 1 2 4.2e-11 2.1e-09 30.4 0.0 2 69 4 67 3 79 0.85 # 7309 # 8874 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 2_10 - 522 SMC_N PF02463.14 220 3.7e-11 36.1 0.0 2 2 0.0071 0.35 3.5 0.0 163 204 281 321 253 330 0.85 # 7309 # 8874 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 3_5 - 232 SMC_N PF02463.14 220 4.2e-09 29.4 0.0 1 1 7e-09 3.5e-07 23.1 0.0 24 212 36 216 24 220 0.76 # 1766 # 2461 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_26 - 358 SMC_N PF02463.14 220 6.8e-08 25.4 0.2 1 1 2.6e-08 1.3e-06 21.2 0.2 24 209 27 203 16 211 0.66 # 21508 # 22581 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 1_68 - 142 HTH_Tnp_1 PF01527.15 76 7.2e-19 61.1 0.3 1 1 2.7e-20 1.3e-18 60.2 0.1 3 53 10 61 8 97 0.78 # 56465 # 56890 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.491 2_32 - 146 HTH_Tnp_1 PF01527.15 76 4.7e-09 29.6 0.1 1 1 1.5e-10 7.4e-09 29.0 0.1 24 75 68 125 62 125 0.86 # 25471 # 25908 # -1 # ID=2_32;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.537 9_1 - 241 HTH_Tnp_1 PF01527.15 76 0.00039 13.9 0.3 1 1 1.7e-05 0.00084 12.8 0.3 4 51 12 64 10 69 0.79 # 3 # 725 # 1 # ID=9_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 8_1 - 202 GerE PF00196.14 58 4.4e-05 16.3 0.0 1 1 1e-06 7.6e-05 15.5 0.0 11 35 166 190 165 201 0.88 # 310 # 915 # 1 # ID=8_1;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.559 3_2 - 162 GerE PF00196.14 58 0.00032 13.5 0.7 1 2 0.0046 0.35 3.8 0.1 11 46 12 47 10 54 0.78 # 785 # 1270 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 3_2 - 162 GerE PF00196.14 58 0.00032 13.5 0.7 2 2 0.00025 0.018 7.9 0.0 19 37 69 87 62 91 0.87 # 785 # 1270 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 1_3 - 736 TraG-D_C PF12696.2 128 1e-19 64.2 0.0 1 1 1.4e-21 2.1e-19 63.1 0.0 1 127 419 541 419 542 0.86 # 2919 # 5126 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 9_1 - 241 DDE_3 PF13358.1 146 0.0011 12.2 0.0 1 1 2.2e-05 0.0033 10.7 0.0 32 90 88 147 65 152 0.87 # 3 # 725 # 1 # ID=9_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 1_39 - 249 Bac_DnaA PF00308.13 219 5.1e-07 23.0 0.0 1 1 5.2e-09 7.7e-07 22.4 0.0 37 136 101 198 83 204 0.88 # 32685 # 33431 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 2_26 - 358 TIGR03263 TIGR03263 180 8.7e-05 15.4 0.1 1 2 3.1e-06 0.00047 13.0 0.0 2 22 28 48 27 85 0.82 # 21508 # 22581 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 2_26 - 358 TIGR03263 TIGR03263 180 8.7e-05 15.4 0.1 2 2 0.036 5.4 -0.2 0.1 115 152 151 188 135 204 0.81 # 21508 # 22581 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 1_56 - 228 UPF0020 PF01170.13 180 1.9e-05 17.7 0.0 1 2 0.00029 0.043 6.8 0.0 103 119 17 33 4 88 0.73 # 45737 # 46420 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_56 - 228 UPF0020 PF01170.13 180 1.9e-05 17.7 0.0 2 2 6.2e-05 0.0092 9.0 0.0 28 54 163 189 158 221 0.67 # 45737 # 46420 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_47 - 188 Methyltransf_25 PF13649.1 101 0.00016 15.5 0.0 1 1 1.7e-06 0.00025 14.9 0.0 1 101 54 142 54 142 0.81 # 39454 # 40017 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 1_27 - 476 DivIC PF04977.10 80 0.0013 11.7 4.6 1 1 1.8e-05 0.0027 10.7 4.6 17 66 76 124 72 125 0.92 # 23119 # 24546 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.571 2_10 - 522 AAA_21 PF13304.1 303 9.3e-14 45.5 0.1 1 2 2.1e-06 0.00011 15.7 0.0 2 24 27 49 27 76 0.83 # 7309 # 8874 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 2_10 - 522 AAA_21 PF13304.1 303 9.3e-14 45.5 0.1 2 2 6.2e-10 3.1e-08 27.3 0.2 261 301 280 318 243 320 0.90 # 7309 # 8874 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 3_5 - 232 AAA_21 PF13304.1 303 3.5e-13 43.6 0.0 1 2 5.6e-06 0.00028 14.3 0.1 1 22 38 59 38 71 0.87 # 1766 # 2461 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 3_5 - 232 AAA_21 PF13304.1 303 3.5e-13 43.6 0.0 2 2 9.3e-10 4.6e-08 26.8 0.0 234 301 141 205 134 206 0.96 # 1766 # 2461 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_26 - 358 AAA_21 PF13304.1 303 1.3e-10 35.1 0.0 1 2 1.1e-07 5.3e-06 20.0 0.0 1 59 29 96 29 112 0.69 # 21508 # 22581 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 2_26 - 358 AAA_21 PF13304.1 303 1.3e-10 35.1 0.0 2 2 1.3e-05 0.00066 13.1 0.0 234 298 129 191 118 197 0.88 # 21508 # 22581 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 1_38 - 514 Sigma70_r4 PF04545.11 50 6.5e-05 15.7 0.1 1 1 8.7e-07 6.5e-05 15.7 0.1 10 44 12 46 9 48 0.93 # 31129 # 32670 # 1 # ID=1_38;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.481 3_2 - 162 Sigma70_r4 PF04545.11 50 9e-05 15.3 0.4 1 2 0.035 2.6 1.0 0.0 21 38 20 37 18 48 0.79 # 785 # 1270 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 3_2 - 162 Sigma70_r4 PF04545.11 50 9e-05 15.3 0.4 2 2 1.2e-05 0.00087 12.1 0.0 16 37 64 85 54 89 0.84 # 785 # 1270 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 1_22 - 74 zf-dskA_traR PF01258.12 36 2.5e-15 49.4 3.4 1 1 2.5e-17 3.7e-15 48.9 3.4 5 36 35 67 30 67 0.91 # 21126 # 21347 # -1 # ID=1_22;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.432 3_2 - 162 DUF2316 PF10078.4 89 0.00057 13.4 1.1 1 2 0.0062 0.93 3.1 0.1 24 42 20 38 8 53 0.79 # 785 # 1270 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 3_2 - 162 DUF2316 PF10078.4 89 0.00057 13.4 1.1 2 2 8.3e-05 0.012 9.1 0.1 14 48 59 93 46 111 0.84 # 785 # 1270 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 1_39 - 249 AAA PF00004.24 132 5.8e-06 20.0 0.0 1 1 1.1e-07 8.3e-06 19.5 0.0 1 66 101 167 101 227 0.86 # 32685 # 33431 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 2_26 - 358 AAA PF00004.24 132 0.00061 13.5 0.0 1 1 1.6e-05 0.0012 12.5 0.0 1 20 30 49 30 75 0.93 # 21508 # 22581 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 1_43 - 653 KorB PF08535.5 93 0.00011 15.9 0.0 1 1 2.2e-06 0.00033 14.3 0.0 2 43 152 193 151 204 0.93 # 35752 # 37710 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.585 1_31 - 121 CTP_transf_2 PF01467.21 157 0.0012 12.3 0.0 1 1 9.7e-06 0.0014 12.1 0.0 32 64 7 38 2 93 0.70 # 26165 # 26527 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.490 1_39 - 249 TIGR00382 TIGR00382 414 0.00013 14.2 0.0 1 1 1.2e-06 0.00019 13.7 0.0 117 138 98 119 75 123 0.87 # 32685 # 33431 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 2_26 - 358 TOBE_2 PF08402.5 75 4.7e-12 39.3 0.1 1 1 7.2e-14 1.1e-11 38.1 0.1 1 75 270 342 270 342 0.94 # 21508 # 22581 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 6_3 - 400 TIGR01394 TIGR01394 594 0.0022 9.3 0.0 1 1 2.2e-05 0.0033 8.8 0.0 408 486 267 343 261 354 0.84 # 1812 # 3011 # -1 # ID=6_3;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.636 1_56 - 228 N6_N4_Mtase PF01555.13 231 9.4e-37 120.1 0.0 1 2 1.2e-15 1.7e-13 44.0 0.0 1 114 21 124 21 137 0.89 # 45737 # 46420 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_56 - 228 N6_N4_Mtase PF01555.13 231 9.4e-37 120.1 0.0 2 2 5.4e-25 8e-23 74.5 0.0 169 228 141 200 126 203 0.90 # 45737 # 46420 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 2_30 - 149 rve_2 PF13333.1 52 4.2e-08 26.7 0.0 1 1 4.8e-10 7.2e-08 25.9 0.0 1 43 83 129 83 137 0.83 # 24583 # 25029 # -1 # ID=2_30;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.510 1_61 - 133 MerR_1 PF13411.1 69 5e-05 16.5 0.0 1 1 1.5e-06 0.00023 14.4 0.0 2 45 41 89 40 105 0.75 # 50313 # 50711 # -1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.479 3_5 - 232 cobW PF02492.14 178 0.00075 12.4 0.0 1 1 1.7e-05 0.0012 11.7 0.0 3 21 39 57 37 80 0.85 # 1766 # 2461 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_11 - 341 cobW PF02492.14 178 0.0012 11.8 0.0 1 1 2.8e-05 0.0021 11.0 0.0 4 30 5 31 3 53 0.72 # 8859 # 9881 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.541 2_26 - 358 AAA_16 PF13191.1 185 2.7e-07 24.2 0.1 1 1 3.2e-08 6.8e-07 22.9 0.1 14 48 18 50 15 84 0.78 # 21508 # 22581 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 1_39 - 249 AAA_16 PF13191.1 185 8e-06 19.4 0.3 1 1 1.3e-06 2.7e-05 17.7 0.1 25 52 99 132 76 164 0.74 # 32685 # 33431 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 3_5 - 232 AAA_16 PF13191.1 185 9.1e-06 19.2 0.4 1 1 9.7e-07 2.1e-05 18.0 0.4 18 56 30 69 23 200 0.73 # 1766 # 2461 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_3 - 736 AAA_16 PF13191.1 185 6.8e-05 16.4 0.0 1 1 1.5e-05 0.00032 14.2 0.0 21 57 182 219 179 264 0.81 # 2919 # 5126 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 2_6 - 1275 AAA_16 PF13191.1 185 0.00024 14.6 0.0 1 1 3.4e-05 0.00072 13.0 0.0 14 64 46 96 38 111 0.76 # 2416 # 6240 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.414 1_25 - 107 AAA_16 PF13191.1 185 0.0003 14.2 0.1 1 1 3.1e-05 0.00067 13.1 0.1 22 51 70 99 62 104 0.90 # 22238 # 22558 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 4_12 - 845 AAA_16 PF13191.1 185 0.016 8.6 5.5 1 2 0.0035 0.075 6.5 0.0 23 46 72 95 55 103 0.82 # 7578 # 10112 # -1 # ID=4_12;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.608 4_12 - 845 AAA_16 PF13191.1 185 0.016 8.6 5.5 2 2 0.029 0.62 3.5 0.1 44 120 171 261 127 319 0.65 # 7578 # 10112 # -1 # ID=4_12;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.608 2_26 - 358 AAA_22 PF13401.1 131 2.9e-06 20.9 0.0 1 1 1.8e-07 5.3e-06 20.1 0.0 3 57 26 81 24 189 0.84 # 21508 # 22581 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 3_5 - 232 AAA_22 PF13401.1 131 3.5e-05 17.4 0.7 1 1 8.5e-06 0.00025 14.7 0.7 3 25 35 57 31 207 0.82 # 1766 # 2461 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_11 - 341 AAA_22 PF13401.1 131 5e-05 16.9 0.0 1 1 1.2e-05 0.00035 14.2 0.0 8 111 5 155 4 167 0.75 # 8859 # 9881 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.541 1_39 - 249 AAA_22 PF13401.1 131 0.00012 15.7 0.2 1 1 1.2e-05 0.00036 14.1 0.2 5 49 99 138 95 183 0.80 # 32685 # 33431 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_25 - 107 AAA_22 PF13401.1 131 0.0015 12.2 0.0 1 1 8.2e-05 0.0024 11.5 0.0 3 27 71 95 66 103 0.86 # 22238 # 22558 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 1_39 - 249 TIGR00362 TIGR00362 437 3e-10 32.8 0.0 1 1 2.7e-12 4e-10 32.4 0.0 140 237 101 196 82 203 0.85 # 32685 # 33431 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_61 - 133 HTH_AraC PF00165.18 42 0.00032 14.0 0.0 1 1 3.9e-06 0.00058 13.2 0.0 4 27 35 58 33 62 0.81 # 50313 # 50711 # -1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.479 2_10 - 522 AAA_29 PF13555.1 62 1.4e-07 24.5 0.0 1 1 7.4e-09 2.8e-07 23.5 0.0 2 49 5 50 4 57 0.84 # 7309 # 8874 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 3_5 - 232 AAA_29 PF13555.1 62 4e-06 19.8 0.1 1 1 2e-07 7.6e-06 18.9 0.1 16 42 30 55 24 71 0.78 # 1766 # 2461 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_26 - 358 AAA_29 PF13555.1 62 1.8e-05 17.7 0.0 1 1 1e-06 3.8e-05 16.7 0.0 17 40 22 44 17 48 0.85 # 21508 # 22581 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 1_39 - 249 AAA_29 PF13555.1 62 0.00015 14.7 0.2 1 1 1.9e-05 0.0007 12.6 0.1 22 37 98 112 88 118 0.80 # 32685 # 33431 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_68 - 142 LZ_Tnp_IS481 PF13011.1 85 0.00085 13.2 0.1 1 1 1.5e-05 0.0022 11.9 0.0 25 53 30 58 19 72 0.87 # 56465 # 56890 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.491 1_5 - 940 Orn_Arg_deC_N PF02784.11 251 0.0018 10.9 0.1 1 1 1.2e-05 0.0018 10.9 0.1 171 212 610 650 598 682 0.79 # 6657 # 9476 # -1 # ID=1_5;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.506 1_39 - 249 SRP54 PF00448.17 196 0.00034 13.6 0.1 1 2 2.8e-05 0.0041 10.0 0.1 3 33 100 130 98 136 0.92 # 32685 # 33431 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_39 - 249 SRP54 PF00448.17 196 0.00034 13.6 0.1 2 2 0.013 2 1.3 0.0 82 124 158 200 151 218 0.87 # 32685 # 33431 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 3_5 - 232 AAA_28 PF13521.1 163 1.1e-06 22.1 0.1 1 2 2.3e-06 8.7e-05 16.0 0.0 2 21 39 58 38 94 0.79 # 1766 # 2461 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 3_5 - 232 AAA_28 PF13521.1 163 1.1e-06 22.1 0.1 2 2 0.011 0.43 4.0 0.0 19 79 111 168 104 174 0.63 # 1766 # 2461 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_26 - 358 AAA_28 PF13521.1 163 4e-05 17.1 0.0 1 1 2e-06 7.4e-05 16.2 0.0 2 22 30 50 29 112 0.79 # 21508 # 22581 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 1_39 - 249 AAA_28 PF13521.1 163 0.00014 15.3 0.0 1 1 6.5e-06 0.00024 14.5 0.0 2 27 101 130 100 167 0.82 # 32685 # 33431 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_3 - 736 AAA_28 PF13521.1 163 0.00061 13.2 0.0 1 1 4.3e-05 0.0016 11.9 0.0 2 37 188 228 187 252 0.78 # 2919 # 5126 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 1_32 - 76 IF2_assoc PF08364.6 41 0.0033 11.0 2.8 1 2 0.043 6.4 0.4 0.3 19 29 6 16 3 16 0.78 # 26561 # 26788 # -1 # ID=1_32;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.430 1_32 - 76 IF2_assoc PF08364.6 41 0.0033 11.0 2.8 2 2 2.7e-05 0.004 10.7 0.1 16 32 28 44 27 51 0.85 # 26561 # 26788 # -1 # ID=1_32;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.430 9_1 - 241 HTH_32 PF13565.1 77 1.2e-06 22.7 0.1 1 1 3.5e-08 5.2e-06 20.7 0.0 25 76 10 56 2 57 0.83 # 3 # 725 # 1 # ID=9_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 3_2 - 162 HTH_3 PF01381.17 55 0.00075 12.8 0.8 1 2 0.093 14 -0.8 0.0 4 24 13 34 10 39 0.65 # 785 # 1270 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 3_2 - 162 HTH_3 PF01381.17 55 0.00075 12.8 0.8 2 2 1.5e-05 0.0023 11.3 0.2 9 29 68 88 61 89 0.88 # 785 # 1270 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 2_26 - 358 Rad17 PF03215.10 519 3.3e-06 19.4 0.0 1 1 3.1e-08 4.6e-06 19.0 0.0 32 96 14 79 8 102 0.79 # 21508 # 22581 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 1_68 - 142 HTH_23 PF13384.1 50 4.1e-09 29.4 0.0 1 1 4e-10 7.5e-09 28.6 0.0 5 45 17 58 13 64 0.89 # 56465 # 56890 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.491 8_1 - 202 HTH_23 PF13384.1 50 1.8e-07 24.2 0.2 1 1 9.7e-09 1.8e-07 24.2 0.2 10 42 166 198 160 201 0.92 # 310 # 915 # 1 # ID=8_1;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.559 3_2 - 162 HTH_23 PF13384.1 50 4.1e-06 19.9 1.0 1 2 0.006 0.11 5.8 0.1 18 36 20 38 10 46 0.85 # 785 # 1270 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 3_2 - 162 HTH_23 PF13384.1 50 4.1e-06 19.9 1.0 2 2 4.6e-05 0.00085 12.5 0.1 7 37 57 88 51 92 0.82 # 785 # 1270 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 9_1 - 241 HTH_23 PF13384.1 50 9.8e-06 18.7 0.7 1 1 1.5e-05 0.00029 14.0 0.1 28 42 47 61 46 68 0.87 # 3 # 725 # 1 # ID=9_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 1_43 - 653 HTH_23 PF13384.1 50 1.6e-05 18.0 0.0 1 1 4.5e-06 8.5e-05 15.7 0.0 13 40 149 176 143 180 0.91 # 35752 # 37710 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.585 1_38 - 514 HTH_23 PF13384.1 50 2.2e-05 17.5 1.2 1 1 2.8e-06 5.2e-05 16.4 0.1 6 47 10 52 5 55 0.82 # 31129 # 32670 # 1 # ID=1_38;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.481 2_32 - 146 HTH_23 PF13384.1 50 0.00052 13.2 0.0 1 1 6.2e-05 0.0012 12.1 0.0 22 43 72 93 66 113 0.86 # 25471 # 25908 # -1 # ID=2_32;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.537 6_4 - 226 HTH_23 PF13384.1 50 0.0013 11.9 0.2 1 1 0.00039 0.0072 9.5 0.0 10 35 22 51 14 64 0.75 # 3090 # 3767 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 8_1 - 202 HTH_7 PF02796.10 45 2.3e-05 17.7 0.0 1 1 4.4e-07 6.5e-05 16.3 0.0 13 38 165 190 156 190 0.93 # 310 # 915 # 1 # ID=8_1;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.559 3_5 - 232 NB-ARC PF00931.17 287 0.0009 11.6 0.1 1 1 1.9e-05 0.0014 10.9 0.1 18 37 35 54 24 65 0.87 # 1766 # 2461 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_26 - 358 NB-ARC PF00931.17 287 0.0011 11.3 0.0 1 1 3.9e-05 0.0029 9.9 0.0 12 37 20 45 15 49 0.82 # 21508 # 22581 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 2_26 - 358 Mg_chelatase PF01078.16 207 0.00014 14.5 0.0 1 1 1.8e-06 0.00026 13.6 0.0 14 84 19 89 6 102 0.79 # 21508 # 22581 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 1_38 - 514 HTH_29 PF13551.1 112 9.3e-06 19.3 0.6 1 2 8.6e-06 0.00043 13.9 0.0 5 43 14 53 10 116 0.84 # 31129 # 32670 # 1 # ID=1_38;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.481 1_38 - 514 HTH_29 PF13551.1 112 9.3e-06 19.3 0.6 2 2 0.058 2.9 1.6 0.1 70 90 393 416 361 432 0.65 # 31129 # 32670 # 1 # ID=1_38;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.481 8_1 - 202 HTH_29 PF13551.1 112 6.6e-05 16.5 0.4 1 2 0.025 1.2 2.8 0.0 52 88 44 87 32 101 0.60 # 310 # 915 # 1 # ID=8_1;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.559 8_1 - 202 HTH_29 PF13551.1 112 6.6e-05 16.5 0.4 2 2 5.7e-05 0.0028 11.3 0.2 4 36 166 197 165 200 0.89 # 310 # 915 # 1 # ID=8_1;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.559 1_68 - 142 HTH_29 PF13551.1 112 7.5e-05 16.4 0.1 1 1 3.8e-06 0.00019 15.1 0.1 7 41 25 59 19 108 0.83 # 56465 # 56890 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.491 1_47 - 188 Met_10 PF02475.11 200 0.00077 12.5 0.0 1 1 7e-06 0.0011 12.1 0.0 99 189 48 132 38 145 0.78 # 39454 # 40017 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 1_70 - 538 DDE_Tnp_IS66 PF03050.9 271 6.5e-99 323.9 0.0 1 1 8.7e-101 6.5e-99 323.9 0.0 1 271 196 487 196 487 0.98 # 57268 # 58881 # 1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.546 9_1 - 241 DDE_Tnp_IS66 PF03050.9 271 3.7e-12 39.4 0.3 1 1 6.4e-14 4.8e-12 39.1 0.3 5 132 16 150 12 180 0.87 # 3 # 725 # 1 # ID=9_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 1_47 - 188 Methyltransf_31 PF13847.1 152 1.2e-06 21.6 0.0 1 1 1e-08 1.5e-06 21.4 0.0 5 118 52 156 48 183 0.84 # 39454 # 40017 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 2_26 - 358 Arch_ATPase PF01637.13 234 0.00035 13.8 0.0 1 1 3.5e-06 0.00052 13.2 0.0 8 39 17 46 11 62 0.80 # 21508 # 22581 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 1_39 - 249 PhoH PF02562.11 205 1.1e-05 18.2 0.1 1 1 5.5e-07 4.1e-05 16.3 0.0 19 47 98 126 87 136 0.86 # 32685 # 33431 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 4_12 - 845 PhoH PF02562.11 205 6e-05 15.8 0.2 1 1 3.6e-06 0.00027 13.7 0.1 3 61 55 117 53 132 0.85 # 7578 # 10112 # -1 # ID=4_12;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.608 2_26 - 358 AAA_5 PF07728.9 139 5.9e-05 16.3 0.2 1 1 2e-06 0.00015 15.0 0.0 2 22 30 50 29 69 0.87 # 21508 # 22581 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 1_39 - 249 AAA_5 PF07728.9 139 0.0011 12.1 0.5 1 1 4.3e-05 0.0032 10.7 0.1 1 34 100 136 100 167 0.81 # 32685 # 33431 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_39 - 249 ResIII PF04851.10 184 3.8e-05 17.0 0.0 1 1 3.6e-07 5.4e-05 16.5 0.0 18 47 88 120 50 143 0.79 # 32685 # 33431 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_3 - 736 TrwB_AAD_bind PF10412.4 386 1.6e-148 487.8 0.0 1 1 5.3e-150 2e-148 487.5 0.0 2 386 172 561 171 561 0.99 # 2919 # 5126 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 1_20 - 880 TrwB_AAD_bind PF10412.4 386 1.3e-06 20.7 0.3 1 1 9.6e-08 3.6e-06 19.2 0.0 15 53 479 517 470 547 0.80 # 18327 # 20966 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 1_25 - 107 TrwB_AAD_bind PF10412.4 386 0.00022 13.3 0.0 1 2 0.087 3.3 -0.4 0.0 295 335 25 65 17 68 0.74 # 22238 # 22558 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 1_25 - 107 TrwB_AAD_bind PF10412.4 386 0.00022 13.3 0.0 2 2 1.4e-05 0.00052 12.1 0.0 5 42 62 99 58 103 0.88 # 22238 # 22558 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 1_39 - 249 TrwB_AAD_bind PF10412.4 386 0.00095 11.3 0.0 1 1 3.7e-05 0.0014 10.7 0.0 14 43 97 126 84 144 0.84 # 32685 # 33431 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_60 - 199 TIGR01968 TIGR01968 261 0.0006 12.3 0.0 1 1 4.4e-06 0.00065 12.2 0.0 104 145 76 117 64 188 0.80 # 49663 # 50259 # -1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.464 2_26 - 358 AAA_18 PF13238.1 129 4.1e-05 17.4 0.0 1 1 2.7e-06 0.00013 15.7 0.0 1 22 30 51 30 139 0.77 # 21508 # 22581 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 3_5 - 232 AAA_18 PF13238.1 129 6.3e-05 16.8 0.7 1 1 9.1e-06 0.00045 14.0 0.7 1 19 39 57 39 214 0.88 # 1766 # 2461 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_39 - 249 AAA_18 PF13238.1 129 0.00019 15.3 0.1 1 1 8.9e-06 0.00044 14.0 0.0 1 45 101 147 101 205 0.72 # 32685 # 33431 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 2_10 - 522 TIGR00611 TIGR00611 365 9.4e-09 27.9 2.7 1 3 2.2e-10 3.3e-08 26.2 0.0 3 56 4 57 2 79 0.92 # 7309 # 8874 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 2_10 - 522 TIGR00611 TIGR00611 365 9.4e-09 27.9 2.7 2 3 0.04 6 -1.0 0.1 322 345 297 319 270 330 0.72 # 7309 # 8874 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 2_10 - 522 TIGR00611 TIGR00611 365 9.4e-09 27.9 2.7 3 3 0.02 3 -0.0 0.2 150 191 453 493 402 508 0.46 # 7309 # 8874 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 1_56 - 228 Methyltransf_15 PF09445.5 164 0.0012 11.9 0.0 1 2 0.045 6.7 -0.3 0.0 53 79 4 29 2 32 0.90 # 45737 # 46420 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_56 - 228 Methyltransf_15 PF09445.5 164 0.0012 11.9 0.0 2 2 4.2e-05 0.0063 9.5 0.0 3 31 166 194 164 209 0.86 # 45737 # 46420 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_47 - 188 Methyltransf_12 PF08242.7 99 1.7e-05 18.7 0.0 1 1 2e-07 3e-05 18.0 0.0 1 99 55 144 55 144 0.86 # 39454 # 40017 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 2_26 - 358 DUF258 PF03193.11 161 2.9e-07 23.3 0.0 1 1 7.1e-09 5.3e-07 22.4 0.0 26 77 17 69 3 83 0.79 # 21508 # 22581 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 3_5 - 232 DUF258 PF03193.11 161 2.1e-06 20.5 0.0 1 1 4.1e-08 3.1e-06 19.9 0.0 19 61 19 62 4 91 0.83 # 1766 # 2461 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_20 - 880 DUF87 PF01935.12 229 2.4e-07 24.3 0.0 1 1 1.4e-08 6.8e-07 22.7 0.0 26 222 482 669 468 676 0.76 # 18327 # 20966 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 3_5 - 232 DUF87 PF01935.12 229 0.00034 13.9 0.0 1 2 5.1e-05 0.0025 11.1 0.1 26 44 39 57 21 59 0.91 # 1766 # 2461 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 3_5 - 232 DUF87 PF01935.12 229 0.00034 13.9 0.0 2 2 0.081 4 0.6 0.0 136 184 128 196 95 215 0.65 # 1766 # 2461 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_25 - 107 DUF87 PF01935.12 229 0.00067 13.0 0.0 1 1 2.1e-05 0.0011 12.3 0.0 25 50 74 99 72 103 0.91 # 22238 # 22558 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 8_1 - 202 HTH_28 PF13518.1 52 4e-08 26.7 0.4 1 1 2.4e-09 9.1e-08 25.5 0.4 4 38 165 199 165 201 0.92 # 310 # 915 # 1 # ID=8_1;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.559 1_68 - 142 HTH_28 PF13518.1 52 9.5e-06 19.1 0.1 1 1 4.6e-07 1.7e-05 18.2 0.1 1 41 18 59 18 63 0.92 # 56465 # 56890 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.491 9_1 - 241 HTH_28 PF13518.1 52 8.4e-05 16.0 1.1 1 1 9.7e-06 0.00036 14.0 1.1 22 36 46 60 19 61 0.76 # 3 # 725 # 1 # ID=9_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 3_2 - 162 HTH_28 PF13518.1 52 0.0018 11.8 0.6 1 1 0.00015 0.0058 10.2 0.1 8 31 63 87 54 90 0.79 # 785 # 1270 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 3_5 - 232 TIGR00041 TIGR00041 196 0.00015 14.6 0.1 1 1 2.8e-06 0.00041 13.2 0.1 2 26 34 58 33 81 0.85 # 1766 # 2461 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 6_4 - 226 HTH_Tnp_1_2 PF13022.1 142 0.0012 12.1 0.0 1 1 1.2e-05 0.0017 11.6 0.0 22 77 24 73 5 79 0.76 # 3090 # 3767 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 3_2 - 162 HTH_24 PF13412.1 48 3e-09 29.7 2.4 1 2 0.00013 0.0048 9.8 0.2 9 35 10 37 10 44 0.92 # 785 # 1270 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 3_2 - 162 HTH_24 PF13412.1 48 3e-09 29.7 2.4 2 2 2.3e-07 8.5e-06 18.6 0.0 11 38 62 89 60 90 0.91 # 785 # 1270 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 8_1 - 202 HTH_24 PF13412.1 48 3.6e-05 16.6 0.0 1 1 2.1e-06 7.7e-05 15.6 0.0 16 40 172 196 168 196 0.89 # 310 # 915 # 1 # ID=8_1;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.559 1_38 - 514 HTH_24 PF13412.1 48 0.00029 13.7 1.2 1 2 0.00023 0.0085 9.0 0.1 16 46 22 51 8 51 0.81 # 31129 # 32670 # 1 # ID=1_38;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.481 1_38 - 514 HTH_24 PF13412.1 48 0.00029 13.7 1.2 2 2 0.022 0.82 2.7 0.1 25 43 275 293 270 294 0.83 # 31129 # 32670 # 1 # ID=1_38;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.481 2_18 - 251 HTH_24 PF13412.1 48 0.0009 12.1 0.0 1 1 5.5e-05 0.0021 11.0 0.0 7 42 14 49 10 51 0.90 # 14849 # 15601 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.494 1_39 - 249 AAA_26 PF13500.1 199 0.00069 12.7 0.0 1 1 6.6e-06 0.00098 12.2 0.0 5 60 103 160 99 200 0.71 # 32685 # 33431 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_39 - 249 Sigma54_activ_2 PF14532.1 138 1.9e-05 18.2 0.0 1 1 2.9e-07 4.4e-05 17.0 0.0 20 111 97 202 85 229 0.65 # 32685 # 33431 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_47 - 188 TIGR03533 TIGR03533 284 3.3e-05 16.5 0.0 1 1 3.5e-07 5.2e-05 15.8 0.0 116 210 45 133 37 141 0.87 # 39454 # 40017 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 1_47 - 188 TIGR03534 TIGR03534 253 4.7e-08 25.9 0.0 1 1 3.7e-10 5.5e-08 25.7 0.0 81 175 45 131 11 148 0.85 # 39454 # 40017 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 8_1 - 202 HTH_10 PF04967.7 53 0.00066 12.8 0.0 1 1 1.3e-05 0.0019 11.3 0.0 27 46 177 196 173 199 0.86 # 310 # 915 # 1 # ID=8_1;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.559 3_5 - 232 MMR_HSR1 PF01926.18 116 0.00028 14.3 0.2 1 1 6.3e-06 0.00047 13.6 0.2 2 20 39 57 38 201 0.91 # 1766 # 2461 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_26 - 358 MMR_HSR1 PF01926.18 116 0.00069 13.1 0.0 1 1 1.7e-05 0.0013 12.2 0.0 2 21 30 49 29 84 0.82 # 21508 # 22581 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 1_39 - 249 DEAD PF00270.24 169 9.3e-05 15.4 0.0 1 1 8.6e-07 0.00013 15.0 0.0 14 62 98 143 84 197 0.87 # 32685 # 33431 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 2_26 - 358 Miro PF08477.8 119 0.00018 15.5 0.0 1 1 2.9e-06 0.00043 14.3 0.0 2 30 30 61 30 93 0.76 # 21508 # 22581 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 1_61 - 133 HTH_31 PF13560.1 64 3.8e-05 17.4 0.8 1 1 1.5e-06 0.00011 15.9 0.2 12 45 37 69 31 73 0.86 # 50313 # 50711 # -1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.479 3_2 - 162 HTH_31 PF13560.1 64 0.00014 15.6 0.4 1 1 0.00029 0.022 8.5 0.4 6 31 10 36 8 89 0.74 # 785 # 1270 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 1_39 - 249 DUF2075 PF09848.4 352 0.0014 11.1 0.0 1 1 1.3e-05 0.0019 10.6 0.0 1 50 98 144 98 160 0.81 # 32685 # 33431 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 4_12 - 845 UvrD_C_2 PF13538.1 104 5e-08 26.5 0.7 1 2 0.01 0.78 3.4 0.0 6 45 315 354 311 383 0.73 # 7578 # 10112 # -1 # ID=4_12;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.608 4_12 - 845 UvrD_C_2 PF13538.1 104 5e-08 26.5 0.7 2 2 4e-08 3e-06 20.8 0.2 3 102 429 532 427 534 0.77 # 7578 # 10112 # -1 # ID=4_12;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.608 2_11 - 341 UvrD_C_2 PF13538.1 104 0.00011 15.8 0.0 1 1 3e-06 0.00023 14.8 0.0 37 103 247 329 224 330 0.65 # 8859 # 9881 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.541 1_47 - 188 TIGR00755 TIGR00755 256 3.8e-09 29.3 0.0 1 1 3.4e-11 5.1e-09 28.9 0.0 8 105 29 123 25 134 0.90 # 39454 # 40017 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 4_5 - 87 Rad60-SLD PF11976.3 72 0.00016 14.8 0.1 1 1 1.5e-06 0.00023 14.3 0.1 12 39 41 68 33 77 0.83 # 2801 # 3061 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.418 1_39 - 249 T2SE PF00437.15 272 4.3e-06 19.2 0.0 1 1 8.7e-08 6.5e-06 18.6 0.0 99 148 67 118 29 126 0.81 # 32685 # 33431 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_25 - 107 T2SE PF00437.15 272 0.0011 11.3 0.0 1 1 1.6e-05 0.0012 11.2 0.0 107 154 54 98 24 103 0.79 # 22238 # 22558 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 3_5 - 232 NACHT PF05729.7 166 0.00028 14.0 0.1 1 1 3.4e-05 0.0013 11.9 0.0 3 20 39 56 37 76 0.86 # 1766 # 2461 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_26 - 358 NACHT PF05729.7 166 0.00031 13.9 0.1 1 1 1.7e-05 0.00064 12.9 0.1 3 21 30 48 28 50 0.89 # 21508 # 22581 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 1_39 - 249 NACHT PF05729.7 166 0.00054 13.1 1.2 1 1 4.2e-05 0.0016 11.6 0.7 3 24 101 122 99 190 0.90 # 32685 # 33431 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 4_12 - 845 NACHT PF05729.7 166 0.00068 12.8 0.1 1 2 0.00041 0.015 8.4 0.0 2 24 75 97 74 165 0.77 # 7578 # 10112 # -1 # ID=4_12;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.608 4_12 - 845 NACHT PF05729.7 166 0.00068 12.8 0.1 2 2 0.055 2 1.5 0.1 104 161 223 278 199 282 0.86 # 7578 # 10112 # -1 # ID=4_12;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.608 2_26 - 358 AAA_17 PF13207.1 121 1e-06 23.1 0.0 1 1 4.9e-08 2.4e-06 21.9 0.0 2 60 30 118 29 182 0.54 # 21508 # 22581 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 1_39 - 249 AAA_17 PF13207.1 121 2.9e-06 21.6 0.5 1 1 1.3e-07 6.3e-06 20.5 0.1 2 64 101 173 100 231 0.62 # 32685 # 33431 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 3_5 - 232 AAA_17 PF13207.1 121 4.2e-05 17.9 0.2 1 1 1.3e-06 6.5e-05 17.2 0.2 2 19 39 56 38 219 0.85 # 1766 # 2461 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 3_5 - 232 TIGR02211 TIGR02211 221 6.1e-64 208.7 0.1 1 1 9.9e-66 7.4e-64 208.4 0.1 16 218 21 219 10 222 0.93 # 1766 # 2461 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_26 - 358 TIGR02211 TIGR02211 221 9.7e-44 142.6 0.0 1 1 1.6e-45 1.2e-43 142.3 0.0 3 218 3 209 1 212 0.91 # 21508 # 22581 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 1_39 - 249 AAA_25 PF13481.1 194 2e-07 24.1 0.1 1 1 8.6e-09 4.3e-07 23.0 0.1 28 63 93 129 83 197 0.72 # 32685 # 33431 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 3_5 - 232 AAA_25 PF13481.1 194 9e-06 18.6 0.0 1 2 1.5e-06 7.6e-05 15.6 0.0 29 58 32 62 14 131 0.78 # 1766 # 2461 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 3_5 - 232 AAA_25 PF13481.1 194 9e-06 18.6 0.0 2 2 0.051 2.5 0.9 0.0 161 188 175 201 165 206 0.69 # 1766 # 2461 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_26 - 358 AAA_25 PF13481.1 194 3.1e-05 16.9 0.3 1 1 2.5e-06 0.00012 14.9 0.0 30 54 24 48 11 75 0.83 # 21508 # 22581 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 2_11 - 341 Viral_helicase1 PF01443.13 234 9.7e-12 38.3 0.1 1 2 3.9e-07 2.9e-05 17.1 0.0 2 30 5 38 4 59 0.76 # 8859 # 9881 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.541 2_11 - 341 Viral_helicase1 PF01443.13 234 9.7e-12 38.3 0.1 2 2 1.4e-07 1.1e-05 18.5 0.1 63 233 133 330 122 331 0.67 # 8859 # 9881 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.541 4_12 - 845 Viral_helicase1 PF01443.13 234 0.00015 14.8 0.0 1 2 0.00013 0.0094 8.9 0.0 1 102 76 193 76 282 0.64 # 7578 # 10112 # -1 # ID=4_12;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.608 4_12 - 845 Viral_helicase1 PF01443.13 234 0.00015 14.8 0.0 2 2 0.0052 0.39 3.6 0.0 171 234 475 535 429 535 0.62 # 7578 # 10112 # -1 # ID=4_12;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.608 2_10 - 522 AAA_15 PF13175.1 415 5e-17 55.4 0.1 1 2 5.1e-09 2.5e-07 23.5 0.0 2 45 5 47 4 63 0.90 # 7309 # 8874 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 2_10 - 522 AAA_15 PF13175.1 415 5e-17 55.4 0.1 2 2 5e-11 2.5e-09 30.1 0.1 332 414 235 318 183 319 0.74 # 7309 # 8874 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 2_26 - 358 AAA_15 PF13175.1 415 1.3e-06 21.1 0.0 1 2 0.0013 0.064 5.7 0.0 19 42 23 47 5 103 0.80 # 21508 # 22581 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 2_26 - 358 AAA_15 PF13175.1 415 1.3e-06 21.1 0.0 2 2 5e-06 0.00025 13.6 0.0 372 411 152 191 143 193 0.93 # 21508 # 22581 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 3_5 - 232 AAA_15 PF13175.1 415 0.00036 13.1 0.0 1 2 0.00012 0.006 9.1 0.0 25 46 34 60 9 93 0.72 # 1766 # 2461 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 3_5 - 232 AAA_15 PF13175.1 415 0.00036 13.1 0.0 2 2 0.017 0.83 2.0 0.0 372 414 164 205 140 205 0.89 # 1766 # 2461 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_25 - 107 Pox_A32 PF04665.7 241 0.00012 14.9 0.0 1 2 0.03 2.2 0.9 0.0 2 29 41 67 40 71 0.77 # 22238 # 22558 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 1_25 - 107 Pox_A32 PF04665.7 241 0.00012 14.9 0.0 2 2 5.6e-06 0.00042 13.1 0.0 7 42 66 101 60 104 0.89 # 22238 # 22558 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 1_20 - 880 Pox_A32 PF04665.7 241 0.00096 11.9 0.0 1 1 3.7e-05 0.0027 10.4 0.0 6 38 472 504 469 519 0.85 # 18327 # 20966 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 2_26 - 358 AAA_14 PF13173.1 128 0.00016 15.1 0.0 1 1 7.7e-06 0.00038 13.8 0.0 2 24 27 49 26 90 0.77 # 21508 # 22581 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 1_39 - 249 AAA_14 PF13173.1 128 0.00016 15.0 0.0 1 1 5.5e-06 0.00027 14.3 0.0 3 72 99 170 97 240 0.74 # 32685 # 33431 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 3_5 - 232 AAA_14 PF13173.1 128 0.00081 12.8 0.0 1 1 3.7e-05 0.0018 11.6 0.0 2 41 36 75 35 131 0.63 # 1766 # 2461 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 8_1 - 202 HTH_Tnp_ISL3 PF13542.1 52 6.2e-05 15.7 0.2 1 1 2e-06 0.00015 14.4 0.2 29 51 175 197 166 198 0.85 # 310 # 915 # 1 # ID=8_1;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.559 3_2 - 162 HTH_Tnp_ISL3 PF13542.1 52 0.00023 13.8 0.1 1 2 0.008 0.6 2.9 0.0 29 48 21 40 15 43 0.79 # 785 # 1270 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 3_2 - 162 HTH_Tnp_ISL3 PF13542.1 52 0.00023 13.8 0.1 2 2 0.00012 0.009 8.7 0.0 25 45 66 86 55 90 0.83 # 785 # 1270 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 1_61 - 133 MerR PF00376.18 38 1.5e-07 24.4 0.0 1 1 1.7e-09 2.5e-07 23.7 0.0 1 29 41 69 41 75 0.94 # 50313 # 50711 # -1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.479 2_26 - 358 AAA_33 PF13671.1 143 1.4e-05 18.5 0.4 1 1 6.4e-07 4.8e-05 16.7 0.4 2 22 30 50 29 201 0.70 # 21508 # 22581 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 3_5 - 232 AAA_33 PF13671.1 143 0.00056 13.3 1.4 1 1 6.1e-05 0.0046 10.3 1.4 2 19 39 56 38 214 0.73 # 1766 # 2461 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 8_1 - 202 CENP-B_N PF04218.8 53 0.00023 14.0 0.0 1 1 3.9e-06 0.00059 12.8 0.0 21 45 172 196 165 199 0.87 # 310 # 915 # 1 # ID=8_1;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.559 2_26 - 358 ABC_ATPase PF09818.4 448 0.0009 11.3 1.2 1 2 0.0019 0.28 3.1 0.0 240 264 22 47 14 50 0.87 # 21508 # 22581 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 2_26 - 358 ABC_ATPase PF09818.4 448 0.0009 11.3 1.2 2 2 0.00015 0.022 6.7 0.3 378 418 172 212 131 222 0.90 # 21508 # 22581 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 3_5 - 232 SbcCD_C PF13558.1 90 1.3e-05 18.6 0.2 1 1 1.3e-06 0.00019 14.8 0.2 32 89 143 187 126 188 0.76 # 1766 # 2461 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_3 - 736 T4SS-DNA_transf PF02534.9 469 4.2e-10 32.2 0.0 1 1 2.6e-11 1.9e-09 30.0 0.0 263 366 381 481 198 500 0.83 # 2919 # 5126 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 1_20 - 880 T4SS-DNA_transf PF02534.9 469 5.2e-06 18.7 0.0 1 2 0.00024 0.018 7.0 0.0 105 186 533 608 475 623 0.88 # 18327 # 20966 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 1_20 - 880 T4SS-DNA_transf PF02534.9 469 5.2e-06 18.7 0.0 2 2 4.7e-05 0.0035 9.4 0.0 319 378 711 769 663 771 0.90 # 18327 # 20966 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 1_47 - 188 MTS PF05175.9 170 1.4e-09 31.0 0.0 1 1 1.3e-11 1.9e-09 30.6 0.0 31 141 50 149 41 165 0.85 # 39454 # 40017 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 1_34 - 128 Arg_repressor PF01316.16 70 0.00077 12.5 0.5 1 2 0.0046 0.69 3.1 0.0 18 51 12 48 2 57 0.69 # 27762 # 28145 # -1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_34 - 128 Arg_repressor PF01316.16 70 0.00077 12.5 0.5 2 2 0.00013 0.019 8.0 0.1 15 45 56 85 52 86 0.87 # 27762 # 28145 # -1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_25 - 107 RNA_helicase PF00910.17 107 0.00018 15.1 0.0 1 1 5.5e-06 0.00041 14.0 0.0 1 29 75 103 75 106 0.91 # 22238 # 22558 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 2_26 - 358 RNA_helicase PF00910.17 107 0.00071 13.3 0.0 1 1 2.2e-05 0.0016 12.1 0.0 1 19 30 48 30 73 0.91 # 21508 # 22581 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 1_47 - 188 Methyltransf_23 PF13489.1 161 8.3e-05 15.8 0.0 1 1 7.3e-07 0.00011 15.4 0.0 9 125 38 158 27 173 0.78 # 39454 # 40017 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 1_39 - 249 APS_kinase PF01583.15 157 5.9e-05 16.2 0.0 1 1 1.3e-06 0.00019 14.6 0.0 5 35 101 131 98 139 0.92 # 32685 # 33431 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 3_5 - 232 NTPase_1 PF03266.10 168 0.00015 15.0 0.1 1 2 3.4e-05 0.0051 10.0 0.0 2 44 39 83 38 91 0.80 # 1766 # 2461 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 3_5 - 232 NTPase_1 PF03266.10 168 0.00015 15.0 0.1 2 2 0.0042 0.63 3.2 0.0 87 151 153 219 115 230 0.73 # 1766 # 2461 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_12 - 168 DDE_Tnp_IS1 PF03400.8 131 1.5e-79 257.9 0.8 1 1 1.2e-81 1.8e-79 257.7 0.8 1 131 37 167 37 167 0.99 # 10134 # 10637 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.548 1_25 - 107 TIGR01039 TIGR01039 462 0.00099 11.0 0.0 1 1 6.8e-06 0.001 11.0 0.0 138 172 66 100 19 103 0.76 # 22238 # 22558 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 1_70 - 538 Med9 PF07544.8 83 0.024 7.9 9.6 1 2 0.018 2.7 1.4 0.7 48 69 10 31 3 42 0.83 # 57268 # 58881 # 1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.546 1_70 - 538 Med9 PF07544.8 83 0.024 7.9 9.6 2 2 3.2e-05 0.0047 10.2 2.5 51 75 48 72 32 78 0.92 # 57268 # 58881 # 1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.546 9_1 - 241 DDE_Tnp_IS240 PF13610.1 140 1.2e-52 171.1 0.0 1 1 2.3e-54 1.7e-52 170.6 0.0 4 139 81 218 79 219 0.99 # 3 # 725 # 1 # ID=9_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 2_30 - 149 DDE_Tnp_IS240 PF13610.1 140 5.1e-06 20.0 0.0 1 1 8.8e-08 6.5e-06 19.6 0.0 24 137 5 120 3 122 0.89 # 24583 # 25029 # -1 # ID=2_30;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.510 2_26 - 358 PduV-EutP PF10662.4 143 0.0013 11.7 0.1 1 1 2.1e-05 0.0031 10.5 0.0 4 25 30 51 28 68 0.90 # 21508 # 22581 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 2_10 - 522 TIGR00634 TIGR00634 563 0.00034 12.7 0.2 1 1 4.2e-06 0.00063 11.9 0.0 1 46 3 48 3 69 0.93 # 7309 # 8874 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 3_2 - 162 TFIIE_alpha PF02002.12 105 0.00042 13.3 0.8 1 2 1.1e-05 0.0016 11.4 0.1 24 61 16 54 6 64 0.78 # 785 # 1270 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 3_2 - 162 TFIIE_alpha PF02002.12 105 0.00042 13.3 0.8 2 2 0.027 4.1 0.5 0.1 57 102 88 133 51 136 0.65 # 785 # 1270 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 3_2 - 162 HTH_17 PF12728.2 51 1.2e-05 19.0 1.0 1 2 3.9e-05 0.0029 11.4 0.1 2 31 20 48 19 60 0.78 # 785 # 1270 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 3_2 - 162 HTH_17 PF12728.2 51 1.2e-05 19.0 1.0 2 2 0.0013 0.099 6.5 0.1 2 22 69 89 68 119 0.84 # 785 # 1270 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 1_61 - 133 HTH_17 PF12728.2 51 0.00035 14.3 0.1 1 1 1.6e-05 0.0012 12.6 0.0 4 30 42 68 40 80 0.81 # 50313 # 50711 # -1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.479 3_2 - 162 HTH_11 PF08279.7 55 0.00011 15.3 3.0 1 2 0.00022 0.034 7.4 0.3 6 34 10 38 8 52 0.89 # 785 # 1270 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 3_2 - 162 HTH_11 PF08279.7 55 0.00011 15.3 3.0 2 2 0.00012 0.019 8.2 0.2 6 33 60 86 55 87 0.80 # 785 # 1270 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 3_2 - 162 MarR_2 PF12802.2 62 1.2e-05 18.4 0.2 1 2 0.025 1.9 1.8 0.1 11 38 10 36 9 44 0.79 # 785 # 1270 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 3_2 - 162 MarR_2 PF12802.2 62 1.2e-05 18.4 0.2 2 2 4.2e-06 0.00031 13.9 0.0 13 42 62 89 60 90 0.93 # 785 # 1270 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 2_18 - 251 MarR_2 PF12802.2 62 0.0013 11.9 0.0 1 1 4.8e-05 0.0036 10.5 0.0 8 53 13 56 10 60 0.89 # 14849 # 15601 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.494 2_18 - 251 TrmB PF01978.14 68 6.8e-05 16.0 0.0 1 1 9e-07 0.00013 15.1 0.0 12 60 14 62 11 68 0.89 # 14849 # 15601 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.494 2_10 - 522 DUF2813 PF11398.3 373 4.8e-05 16.0 1.2 1 2 4.6e-06 0.00069 12.2 0.0 11 49 12 51 3 56 0.79 # 7309 # 8874 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 2_10 - 522 DUF2813 PF11398.3 373 4.8e-05 16.0 1.2 2 2 0.0067 1 1.8 0.0 287 333 279 326 250 333 0.82 # 7309 # 8874 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 3_2 - 162 HTH_Mga PF08280.6 59 3.9e-05 16.9 0.0 1 1 5.9e-07 8.8e-05 15.7 0.0 13 39 62 88 55 90 0.91 # 785 # 1270 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 1_20 - 880 AAA_10 PF12846.2 304 2.1e-49 162.0 0.1 1 1 1.5e-50 3.6e-49 161.2 0.1 1 299 479 773 479 776 0.90 # 18327 # 20966 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 1_3 - 736 AAA_10 PF12846.2 304 8.9e-08 25.3 0.0 1 1 3.8e-08 9.5e-07 21.9 0.0 3 296 187 494 186 500 0.67 # 2919 # 5126 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 1_25 - 107 AAA_10 PF12846.2 304 1.8e-05 17.7 0.0 1 2 0.0092 0.23 4.3 0.0 272 290 20 42 7 55 0.77 # 22238 # 22558 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 1_25 - 107 AAA_10 PF12846.2 304 1.8e-05 17.7 0.0 2 2 4.6e-05 0.0011 11.8 0.0 2 24 73 95 72 100 0.87 # 22238 # 22558 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 3_5 - 232 AAA_10 PF12846.2 304 1.9e-05 17.6 0.0 1 1 2e-06 5e-05 16.3 0.0 4 29 39 65 37 85 0.76 # 1766 # 2461 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_39 - 249 AAA_10 PF12846.2 304 0.00012 15.0 0.1 1 1 9.4e-06 0.00023 14.1 0.1 2 33 99 130 98 132 0.92 # 32685 # 33431 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 2_26 - 358 AAA_10 PF12846.2 304 0.00077 12.4 0.0 1 1 5.1e-05 0.0013 11.7 0.0 4 22 30 48 28 79 0.86 # 21508 # 22581 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 6_4 - 226 HTH_20 PF12840.2 61 0.00036 13.8 0.1 1 1 5.4e-05 0.0027 11.0 0.0 21 46 30 55 18 63 0.85 # 3090 # 3767 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 3_2 - 162 HTH_20 PF12840.2 61 0.00049 13.4 0.4 1 2 0.0098 0.48 3.8 0.1 25 46 20 44 10 45 0.72 # 785 # 1270 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 3_2 - 162 HTH_20 PF12840.2 61 0.00049 13.4 0.4 2 2 0.00083 0.041 7.2 0.0 17 43 61 87 55 88 0.91 # 785 # 1270 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 2_18 - 251 HTH_20 PF12840.2 61 0.00069 12.9 0.0 1 1 3.5e-05 0.0018 11.6 0.0 13 48 13 48 11 58 0.88 # 14849 # 15601 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.494 1_47 - 188 RrnaAD PF00398.15 262 5.1e-09 28.9 0.0 1 1 4.4e-11 6.6e-09 28.6 0.0 9 113 29 128 24 148 0.89 # 39454 # 40017 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 1_47 - 188 Methyltransf_18 PF12847.2 112 4.4e-10 33.6 0.0 1 1 6.3e-12 9.4e-10 32.6 0.0 4 109 53 146 50 148 0.89 # 39454 # 40017 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 3_5 - 232 AAA_13 PF13166.1 712 0.0025 9.7 0.0 1 2 3.4e-05 0.0051 8.7 0.0 20 42 40 62 25 94 0.83 # 1766 # 2461 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 3_5 - 232 AAA_13 PF13166.1 712 0.0025 9.7 0.0 2 2 0.093 14 -2.7 0.0 525 570 159 202 155 205 0.87 # 1766 # 2461 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 2_26 - 358 Septin PF00735.13 281 0.0002 13.9 0.0 1 1 2.5e-06 0.00037 13.0 0.0 7 92 30 117 26 131 0.83 # 21508 # 22581 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.617 1_39 - 249 IstB_IS21 PF01695.12 178 1.1e-61 200.8 0.0 1 1 9.2e-64 1.4e-61 200.5 0.0 2 176 53 227 52 229 0.98 # 32685 # 33431 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 2_21 - 297 DHDPS PF00701.17 289 3.8e-51 166.8 0.0 1 1 3e-53 4.4e-51 166.6 0.0 1 278 6 287 6 294 0.92 # 17050 # 17940 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.507 4_12 - 845 AAA_11 PF13086.1 236 8.8e-06 18.9 2.7 1 3 8.4e-07 0.00013 15.1 0.0 2 75 57 127 56 148 0.81 # 7578 # 10112 # -1 # ID=4_12;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.608 4_12 - 845 AAA_11 PF13086.1 236 8.8e-06 18.9 2.7 2 3 0.021 3.2 0.7 0.0 197 232 156 194 149 195 0.80 # 7578 # 10112 # -1 # ID=4_12;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.608 4_12 - 845 AAA_11 PF13086.1 236 8.8e-06 18.9 2.7 3 3 0.071 11 -1.0 1.8 87 118 799 827 730 841 0.35 # 7578 # 10112 # -1 # ID=4_12;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.608 1_45 - 176 SSB PF00436.20 104 1.3e-40 130.9 0.3 1 1 1.1e-42 1.7e-40 130.6 0.3 1 101 6 109 6 112 0.95 # 38058 # 38585 # -1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.583 2_22 - 76 ADH_zinc_N_2 PF13602.1 127 2.8e-05 18.5 0.0 1 1 1.9e-07 2.8e-05 18.5 0.0 80 122 26 66 6 71 0.85 # 18554 # 18781 # 1 # ID=2_22;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.592 1_68 - 142 BrkDBD PF09607.5 58 0.00014 14.9 0.9 1 1 1.3e-06 0.00019 14.5 0.0 3 48 11 53 10 59 0.91 # 56465 # 56890 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.491 2_31 - 153 HTH_21 PF13276.1 60 1.1e-18 60.5 8.2 1 3 0.03 4.4 0.9 0.0 14 31 4 21 2 31 0.81 # 25013 # 25471 # -1 # ID=2_31;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.545 2_31 - 153 HTH_21 PF13276.1 60 1.1e-18 60.5 8.2 2 3 1e-20 1.5e-18 60.1 3.6 2 60 46 103 44 103 0.92 # 25013 # 25471 # -1 # ID=2_31;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.545 2_31 - 153 HTH_21 PF13276.1 60 1.1e-18 60.5 8.2 3 3 0.087 13 -0.6 0.1 37 44 107 114 105 115 0.85 # 25013 # 25471 # -1 # ID=2_31;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.545 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/30663337-6d2d-4045-9307-9ce70dac565c # Target file: checkm_output/bins/pm547/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm547/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/30663337-6d2d-4045-9307-9ce70dac565c checkm_output/bins/pm547/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:08:44 2017 # [ok]