# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_58 - 228 Cons_hypoth95 PF03602.10 183 1.4e-05 17.0 0.0 1 2 0.00061 0.046 5.6 0.0 112 127 18 33 9 81 0.69 # 36745 # 37428 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.567 1_58 - 228 Cons_hypoth95 PF03602.10 183 1.4e-05 17.0 0.0 2 2 3.9e-05 0.0029 9.5 0.0 41 62 162 183 145 219 0.78 # 36745 # 37428 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.567 1_39 - 227 KaiC PF06745.8 227 0.00031 12.4 0.1 1 1 7.7e-06 0.00058 11.5 0.1 16 60 70 112 61 129 0.85 # 20892 # 21572 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.391 1_24 - 92 Zn_Tnp_IS1 PF03811.8 36 6.1e-24 75.8 4.5 1 1 3.2e-25 1.2e-23 74.9 4.5 1 36 1 36 1 36 0.99 # 13194 # 13469 # -1 # ID=1_24;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_22 - 44 Zn_Tnp_IS1 PF03811.8 36 2.4e-23 73.9 9.9 1 1 7.1e-25 2.7e-23 73.8 9.9 1 36 1 35 1 35 0.99 # 11989 # 12120 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_41 - 480 ABC_tran PF00005.22 137 8.2e-06 18.7 0.0 1 1 5.1e-07 1.9e-05 17.5 0.0 16 44 249 278 244 362 0.80 # 22901 # 24340 # -1 # ID=1_41;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.343 1_39 - 227 ABC_tran PF00005.22 137 9e-06 18.5 0.0 1 1 2.7e-07 1e-05 18.4 0.0 8 50 70 112 66 206 0.86 # 20892 # 21572 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.391 1_19 - 63 HTH_22 PF13309.1 64 0.00017 13.9 0.1 1 1 7.4e-06 0.00056 12.2 0.1 27 64 7 39 1 39 0.81 # 10877 # 11065 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.481 1_58 - 228 TIGR00095 TIGR00095 194 0.00024 13.0 0.0 1 2 0.0016 0.12 4.1 0.0 123 137 19 33 8 78 0.76 # 36745 # 37428 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.567 1_58 - 228 TIGR00095 TIGR00095 194 0.00024 13.0 0.0 2 2 0.00024 0.018 6.8 0.0 53 86 164 199 155 218 0.77 # 36745 # 37428 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.567 1_39 - 227 DUF815 PF05673.8 250 0.00086 10.7 0.1 1 1 1.7e-05 0.0013 10.2 0.1 56 79 76 99 63 110 0.86 # 20892 # 21572 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.391 1_19 - 63 HTH_DeoR PF08220.7 57 0.00033 12.7 0.0 1 1 5.4e-06 0.0004 12.5 0.0 5 37 9 40 7 51 0.80 # 10877 # 11065 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.481 1_39 - 227 FtsK_SpoIIIE PF01580.13 205 1.2e-05 17.3 0.1 1 1 5.1e-07 1.9e-05 16.7 0.1 41 64 76 99 53 111 0.88 # 20892 # 21572 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.391 1_41 - 480 FtsK_SpoIIIE PF01580.13 205 0.00017 13.6 0.0 1 1 7.8e-06 0.00029 12.8 0.0 42 110 248 313 221 321 0.74 # 22901 # 24340 # -1 # ID=1_41;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.343 1_19 - 63 HTH_38 PF13936.1 44 1.8e-08 26.4 0.1 1 1 3.8e-10 2.8e-08 25.8 0.1 5 42 2 39 2 39 0.95 # 10877 # 11065 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.481 1_41 - 480 MobB PF03205.9 140 9.9e-05 14.6 0.0 1 1 4.7e-06 0.00035 12.8 0.0 4 49 248 292 246 325 0.81 # 22901 # 24340 # -1 # ID=1_41;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.343 1_9 - 240 Sigma54_DBD PF04552.8 160 0.00037 12.5 0.1 1 1 7.8e-06 0.00058 11.9 0.1 99 154 44 97 28 103 0.78 # 2891 # 3610 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.549 1_16 - 513 DUF3584 PF12128.3 1201 0.002 8.0 5.8 1 2 3.8e-06 0.00028 10.7 2.1 304 377 12 86 5 100 0.88 # 8476 # 10014 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.594 1_16 - 513 DUF3584 PF12128.3 1201 0.002 8.0 5.8 2 2 0.066 5 -3.3 0.1 842 978 377 400 346 420 0.42 # 8476 # 10014 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.594 1_41 - 480 AAA_19 PF13245.1 76 2.2e-05 16.7 0.0 1 1 1.6e-06 0.00012 14.4 0.0 11 41 245 273 235 280 0.79 # 22901 # 24340 # -1 # ID=1_41;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.343 1_58 - 228 MethyltransfD12 PF02086.10 260 0.00039 12.4 0.0 1 2 0.026 2 0.3 0.0 175 188 18 31 8 39 0.80 # 36745 # 37428 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.567 1_58 - 228 MethyltransfD12 PF02086.10 260 0.00039 12.4 0.0 2 2 4e-05 0.003 9.5 0.0 20 46 163 189 148 197 0.78 # 36745 # 37428 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.567 1_19 - 63 Sigma70_r4_2 PF08281.7 54 1.5e-05 16.9 0.0 1 1 7.2e-07 1.8e-05 16.7 0.0 31 47 22 38 2 39 0.90 # 10877 # 11065 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.481 1_26 - 314 Sigma70_r4_2 PF08281.7 54 3.3e-05 15.8 0.1 1 1 2.9e-06 7.3e-05 14.7 0.1 13 36 11 33 10 48 0.80 # 13816 # 14757 # -1 # ID=1_26;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.470 1_2 - 124 Sigma70_r4_2 PF08281.7 54 0.00017 13.6 0.0 1 1 9.4e-06 0.00023 13.1 0.0 17 48 53 83 45 89 0.78 # 228 # 599 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.323 1_9 - 240 rve PF00665.21 120 5.4e-07 22.3 0.9 1 1 1.4e-08 1e-06 21.4 0.1 2 40 125 161 124 189 0.91 # 2891 # 3610 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.549 1_41 - 480 AAA_23 PF13476.1 202 1.9e-08 27.4 0.0 1 1 9.4e-10 3.5e-08 26.5 0.0 18 84 243 307 216 418 0.77 # 22901 # 24340 # -1 # ID=1_41;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.343 1_39 - 227 AAA_23 PF13476.1 202 5.4e-05 16.1 0.4 1 1 2.2e-06 8.2e-05 15.5 0.4 19 34 73 88 53 103 0.85 # 20892 # 21572 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.391 1_69 - 188 Methyltransf_26 PF13659.1 117 2e-14 46.2 0.0 1 1 9e-16 3.4e-14 45.4 0.0 2 114 52 147 51 150 0.91 # 43064 # 43627 # 1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.582 1_58 - 228 Methyltransf_26 PF13659.1 117 2.2e-11 36.4 0.1 1 2 1.3e-06 5e-05 15.8 0.0 57 114 7 71 2 74 0.68 # 36745 # 37428 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.567 1_58 - 228 Methyltransf_26 PF13659.1 117 2.2e-11 36.4 0.1 2 2 2e-07 7.7e-06 18.5 0.0 4 44 167 206 164 222 0.82 # 36745 # 37428 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.567 1_22 - 44 zf-TFIIB PF13453.1 41 0.00051 11.8 2.4 1 1 8.8e-06 0.00066 11.4 2.4 1 26 7 35 7 38 0.85 # 11989 # 12120 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_41 - 480 Zeta_toxin PF06414.7 201 0.00072 11.2 0.0 1 1 5.1e-05 0.0019 9.8 0.0 20 42 248 272 245 288 0.77 # 22901 # 24340 # -1 # ID=1_41;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.343 1_39 - 227 Zeta_toxin PF06414.7 201 0.001 10.7 0.1 1 1 4.3e-05 0.0016 10.0 0.1 18 47 75 106 63 111 0.83 # 20892 # 21572 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.391 1_41 - 480 AAA_30 PF13604.1 196 5.6e-05 15.3 0.0 1 1 2.5e-06 9.5e-05 14.5 0.0 6 53 232 280 227 314 0.79 # 22901 # 24340 # -1 # ID=1_41;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.343 1_39 - 227 AAA_30 PF13604.1 196 0.00034 12.7 0.1 1 2 0.00012 0.0046 9.0 0.1 11 38 66 93 62 108 0.74 # 20892 # 21572 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.391 1_39 - 227 AAA_30 PF13604.1 196 0.00034 12.7 0.1 2 2 0.023 0.88 1.6 0.0 131 159 127 158 124 181 0.70 # 20892 # 21572 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.391 1_14 - 127 HTH_Tnp_1 PF01527.15 76 1.6e-23 75.0 0.0 1 1 1.2e-24 2.2e-23 74.6 0.0 1 70 10 86 10 92 0.86 # 7949 # 8329 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.520 1_18 - 127 HTH_Tnp_1 PF01527.15 76 1.6e-23 75.0 0.0 1 1 1.2e-24 2.2e-23 74.6 0.0 1 70 10 86 10 92 0.86 # 10408 # 10788 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.517 1_5 - 122 HTH_Tnp_1 PF01527.15 76 6.5e-16 50.6 0.0 1 1 3.9e-17 7.2e-16 50.5 0.0 3 49 11 58 9 101 0.86 # 1382 # 1747 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.478 1_8 - 92 HTH_Tnp_1 PF01527.15 76 4.5e-09 28.7 0.0 1 1 3.2e-10 5.9e-09 28.3 0.0 24 74 14 70 7 71 0.86 # 2616 # 2891 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.547 1_19 - 63 GerE PF00196.14 58 3.3e-05 15.7 0.0 1 1 5.2e-07 3.9e-05 15.5 0.0 17 40 16 39 4 40 0.85 # 10877 # 11065 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.481 1_58 - 228 UPF0020 PF01170.13 180 1.6e-05 17.1 0.0 1 2 0.00046 0.034 6.2 0.0 103 117 17 31 4 82 0.83 # 36745 # 37428 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.567 1_58 - 228 UPF0020 PF01170.13 180 1.6e-05 17.1 0.0 2 2 6.3e-05 0.0047 9.0 0.0 28 54 163 189 158 220 0.67 # 36745 # 37428 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.567 1_69 - 188 Methyltransf_25 PF13649.1 101 8.5e-05 15.4 0.0 1 1 1.7e-06 0.00012 14.9 0.0 1 101 54 142 54 142 0.81 # 43064 # 43627 # 1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.582 1_49 - 61 DivIC PF04977.10 80 0.00043 12.3 0.0 1 1 1.2e-05 0.00046 12.2 0.0 11 57 9 52 4 58 0.86 # 29491 # 29673 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.410 1_16 - 513 DivIC PF04977.10 80 0.003 9.6 6.2 1 2 0.0019 0.069 5.2 1.4 20 51 17 48 8 52 0.63 # 8476 # 10014 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.594 1_16 - 513 DivIC PF04977.10 80 0.003 9.6 6.2 2 2 0.001 0.037 6.1 0.0 21 47 58 84 54 87 0.83 # 8476 # 10014 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.594 1_7 - 116 RepA_C PF04796.7 161 0.00042 12.4 0.4 1 1 6.7e-06 0.0005 12.2 0.4 16 86 20 93 12 108 0.73 # 2193 # 2540 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.540 1_58 - 228 N6_N4_Mtase PF01555.13 231 1.6e-35 115.1 0.0 1 1 5.6e-35 4.2e-33 107.2 0.0 1 228 21 200 21 203 0.90 # 36745 # 37428 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.567 1_56 - 320 Hydantoinase_A PF01968.13 290 7.7e-05 14.3 0.2 1 4 0.042 3.2 -0.8 0.0 82 106 6 30 4 39 0.87 # 34058 # 35017 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.395 1_56 - 320 Hydantoinase_A PF01968.13 290 7.7e-05 14.3 0.2 2 4 0.076 5.7 -1.6 0.0 176 231 106 158 90 165 0.69 # 34058 # 35017 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.395 1_56 - 320 Hydantoinase_A PF01968.13 290 7.7e-05 14.3 0.2 3 4 0.00014 0.01 7.3 0.0 73 100 163 189 149 206 0.83 # 34058 # 35017 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.395 1_56 - 320 Hydantoinase_A PF01968.13 290 7.7e-05 14.3 0.2 4 4 0.0026 0.19 3.2 0.0 209 270 242 308 190 319 0.66 # 34058 # 35017 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.395 1_41 - 480 cobW PF02492.14 178 0.00018 13.5 0.0 1 1 5.4e-06 0.00041 12.3 0.0 2 33 246 279 245 292 0.80 # 22901 # 24340 # -1 # ID=1_41;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.343 1_39 - 227 AAA_16 PF13191.1 185 7.7e-06 18.5 0.4 1 1 2.5e-07 9.3e-06 18.2 0.4 15 57 64 107 59 197 0.87 # 20892 # 21572 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.391 1_41 - 480 AAA_16 PF13191.1 185 0.00017 14.1 0.0 1 1 7.5e-06 0.00028 13.4 0.0 15 52 235 274 233 403 0.80 # 22901 # 24340 # -1 # ID=1_41;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.343 1_41 - 480 AAA_22 PF13401.1 131 1.1e-06 21.3 0.0 1 1 6.1e-08 2.3e-06 20.3 0.0 6 57 246 295 240 363 0.76 # 22901 # 24340 # -1 # ID=1_41;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.343 1_39 - 227 AAA_22 PF13401.1 131 6.2e-05 15.7 0.0 1 1 2.3e-06 8.6e-05 15.2 0.0 3 31 72 100 69 174 0.84 # 20892 # 21572 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.391 1_41 - 480 AAA_29 PF13555.1 62 5.7e-07 21.6 0.0 1 1 2.9e-08 1.1e-06 20.6 0.0 25 57 246 278 235 283 0.85 # 22901 # 24340 # -1 # ID=1_41;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.343 1_39 - 227 AAA_29 PF13555.1 62 5.6e-05 15.2 2.0 1 1 3e-06 0.00011 14.2 2.0 23 40 73 90 62 95 0.82 # 20892 # 21572 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.391 1_19 - 63 HTH_Tnp_Tc3_1 PF11427.3 50 8.9e-06 17.8 0.0 1 1 1.6e-07 1.2e-05 17.4 0.0 12 44 9 41 2 43 0.92 # 10877 # 11065 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.481 1_3 - 76 IF2_assoc PF08364.6 41 0.0017 11.0 2.8 1 2 0.043 3.2 0.4 0.3 19 29 6 16 3 16 0.78 # 693 # 920 # 1 # ID=1_3;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.425 1_3 - 76 IF2_assoc PF08364.6 41 0.0017 11.0 2.8 2 2 2.7e-05 0.002 10.7 0.1 16 32 28 44 27 51 0.85 # 693 # 920 # 1 # ID=1_3;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.425 1_16 - 513 Mnd1 PF03962.10 188 0.016 7.3 7.9 1 2 5e-05 0.0037 9.4 3.5 62 135 14 88 10 100 0.78 # 8476 # 10014 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.594 1_16 - 513 Mnd1 PF03962.10 188 0.016 7.3 7.9 2 2 0.06 4.5 -0.6 0.1 110 154 374 418 347 444 0.63 # 8476 # 10014 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.594 1_41 - 480 Rad17 PF03215.10 519 0.00016 12.9 0.1 1 2 0.04 3 -1.2 0.0 176 214 155 197 119 225 0.73 # 22901 # 24340 # -1 # ID=1_41;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.343 1_41 - 480 Rad17 PF03215.10 519 0.00016 12.9 0.1 2 2 7.9e-06 0.00059 11.0 0.0 47 89 246 288 234 302 0.84 # 22901 # 24340 # -1 # ID=1_41;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.343 1_19 - 63 HTH_23 PF13384.1 50 3.6e-08 25.4 0.1 1 1 4.9e-09 6.2e-08 24.7 0.1 9 39 9 39 8 40 0.92 # 10877 # 11065 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.481 1_5 - 122 HTH_23 PF13384.1 50 3.7e-06 19.1 0.0 1 1 3.9e-07 4.9e-06 18.7 0.0 7 45 20 59 16 64 0.91 # 1382 # 1747 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.478 1_24 - 92 HTH_23 PF13384.1 50 2.7e-05 16.3 0.0 1 1 3.4e-06 4.3e-05 15.7 0.0 7 40 53 86 51 90 0.92 # 13194 # 13469 # -1 # ID=1_24;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_14 - 127 HTH_23 PF13384.1 50 4.2e-05 15.7 0.0 1 1 5.3e-06 6.7e-05 15.1 0.0 7 44 21 59 16 63 0.91 # 7949 # 8329 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.520 1_18 - 127 HTH_23 PF13384.1 50 4.2e-05 15.7 0.0 1 1 5.3e-06 6.7e-05 15.1 0.0 7 44 21 59 16 63 0.91 # 10408 # 10788 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.517 1_8 - 92 HTH_23 PF13384.1 50 0.00029 13.0 0.1 1 1 5.6e-05 0.00069 11.8 0.0 18 42 14 38 7 49 0.83 # 2616 # 2891 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.547 1_19 - 63 HTH_7 PF02796.10 45 3.2e-07 22.7 0.3 1 1 6.2e-09 4.6e-07 22.2 0.3 6 42 2 38 1 40 0.91 # 10877 # 11065 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.481 1_22 - 44 zinc_ribbon_4 PF13717.1 36 2.5e-05 16.5 4.5 1 1 1.1e-06 3.9e-05 15.8 4.5 3 35 6 38 5 39 0.96 # 11989 # 12120 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_24 - 92 zinc_ribbon_4 PF13717.1 36 4.3e-05 15.7 4.1 1 1 3.1e-06 0.00012 14.3 4.1 3 35 6 39 5 40 0.86 # 13194 # 13469 # -1 # ID=1_24;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_5 - 122 HTH_29 PF13551.1 112 3.6e-05 16.4 0.0 1 1 1.4e-06 5.2e-05 15.9 0.0 2 40 21 59 5 69 0.91 # 1382 # 1747 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.478 1_19 - 63 HTH_29 PF13551.1 112 7.6e-05 15.4 0.0 1 1 2.3e-06 8.5e-05 15.2 0.0 8 34 14 39 8 52 0.84 # 10877 # 11065 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.481 1_69 - 188 Met_10 PF02475.11 200 0.00034 12.7 0.0 1 1 5.8e-06 0.00043 12.4 0.0 99 189 48 132 29 145 0.79 # 43064 # 43627 # 1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.582 1_16 - 513 DDE_Tnp_IS66 PF03050.9 271 1.2e-103 338.5 0.0 1 1 3.3e-105 1.2e-103 338.5 0.0 1 271 175 462 175 462 0.98 # 8476 # 10014 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.594 1_50 - 234 DDE_Tnp_IS66 PF03050.9 271 1.2e-65 213.9 0.2 1 1 4e-67 1.5e-65 213.5 0.2 98 270 4 182 2 183 0.98 # 29959 # 30660 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.558 1_69 - 188 Methyltransf_31 PF13847.1 152 4.7e-07 22.0 0.0 1 1 7.6e-09 5.7e-07 21.7 0.0 5 119 52 162 48 183 0.83 # 43064 # 43627 # 1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.582 1_41 - 480 Arch_ATPase PF01637.13 234 5.3e-06 18.8 0.0 1 1 1.2e-07 8.9e-06 18.0 0.0 22 82 246 314 238 373 0.79 # 22901 # 24340 # -1 # ID=1_41;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.343 1_39 - 227 TrwB_AAD_bind PF10412.4 386 0.00011 13.3 0.1 1 1 2e-06 0.00015 12.9 0.1 18 42 76 100 59 110 0.79 # 20892 # 21572 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.391 1_41 - 480 AAA_18 PF13238.1 129 6.1e-06 19.1 0.0 1 1 2.1e-07 1.6e-05 17.8 0.0 2 86 248 334 248 377 0.60 # 22901 # 24340 # -1 # ID=1_41;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.343 1_58 - 228 Methyltransf_15 PF09445.5 164 0.00056 12.0 0.0 1 2 0.042 3.2 -0.2 0.0 53 79 4 29 2 33 0.90 # 36745 # 37428 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.567 1_58 - 228 Methyltransf_15 PF09445.5 164 0.00056 12.0 0.0 2 2 4.3e-05 0.0033 9.5 0.0 3 31 166 194 164 208 0.86 # 36745 # 37428 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.567 1_69 - 188 Methyltransf_12 PF08242.7 99 8.5e-06 18.8 0.0 1 1 2e-07 1.5e-05 18.0 0.0 1 99 55 144 55 144 0.86 # 43064 # 43627 # 1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.582 1_24 - 92 HTH_Tnp_IS1 PF12759.2 46 4.2e-32 101.9 0.3 1 1 8.7e-34 6.5e-32 101.3 0.3 1 46 43 88 43 88 0.99 # 13194 # 13469 # -1 # ID=1_24;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_69 - 188 Methyltrans_SAM PF10672.4 286 0.00069 11.0 0.0 1 1 1.3e-05 0.00098 10.5 0.0 196 261 113 173 100 180 0.78 # 43064 # 43627 # 1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.582 1_41 - 480 DUF87 PF01935.12 229 4.5e-06 19.1 0.0 1 1 2.5e-07 9.5e-06 18.0 0.0 28 57 249 278 245 289 0.87 # 22901 # 24340 # -1 # ID=1_41;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.343 1_39 - 227 DUF87 PF01935.12 229 0.00047 12.5 0.7 1 1 2e-05 0.00075 11.8 0.7 27 51 77 100 76 108 0.81 # 20892 # 21572 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.391 1_5 - 122 HTH_28 PF13518.1 52 1.5e-07 23.8 0.0 1 1 1.4e-08 2.1e-07 23.4 0.0 1 41 19 60 19 67 0.92 # 1382 # 1747 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.478 1_24 - 92 HTH_28 PF13518.1 52 4.7e-05 15.9 0.0 1 1 4.8e-06 7.2e-05 15.3 0.0 4 35 55 86 53 90 0.91 # 13194 # 13469 # -1 # ID=1_24;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_14 - 127 HTH_28 PF13518.1 52 8.9e-05 15.0 0.0 1 1 9.1e-06 0.00014 14.4 0.0 5 39 24 59 20 69 0.81 # 7949 # 8329 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.520 1_18 - 127 HTH_28 PF13518.1 52 8.9e-05 15.0 0.0 1 1 9.1e-06 0.00014 14.4 0.0 5 39 24 59 20 69 0.81 # 10408 # 10788 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.517 1_19 - 63 HTH_28 PF13518.1 52 0.00032 13.2 0.1 1 1 3.5e-05 0.00052 12.6 0.1 7 34 11 39 8 40 0.74 # 10877 # 11065 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.481 1_19 - 63 HTH_24 PF13412.1 48 0.00037 12.4 0.1 1 1 9.5e-06 0.00072 11.5 0.0 21 39 21 39 20 40 0.94 # 10877 # 11065 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.481 1_69 - 188 TIGR03533 TIGR03533 284 1.7e-05 16.5 0.0 1 1 3.5e-07 2.6e-05 15.8 0.0 116 210 45 133 37 141 0.87 # 43064 # 43627 # 1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.582 1_69 - 188 TIGR03534 TIGR03534 253 2.5e-08 25.8 0.0 1 1 3.9e-10 2.9e-08 25.6 0.0 81 175 45 131 12 148 0.86 # 43064 # 43627 # 1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.582 1_22 - 44 Terminase_GpA PF05876.7 557 0.0013 9.6 2.1 1 1 1.8e-05 0.0014 9.5 2.1 200 239 5 38 2 41 0.81 # 11989 # 12120 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_22 - 44 PhnA_Zn_Ribbon PF08274.7 30 1.9e-05 16.9 0.1 1 1 3.5e-07 2.6e-05 16.5 0.1 4 26 7 35 4 36 0.94 # 11989 # 12120 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_69 - 188 TIGR00755 TIGR00755 256 3.5e-09 28.5 0.0 1 1 6.2e-11 4.6e-09 28.1 0.0 8 105 29 123 25 134 0.90 # 43064 # 43627 # 1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.582 1_19 - 63 HTH_36 PF13730.1 55 6e-05 15.7 0.0 1 1 9.3e-07 7e-05 15.5 0.0 28 47 20 39 2 40 0.86 # 10877 # 11065 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.481 1_41 - 480 T2SE PF00437.15 272 8.3e-39 125.5 0.0 1 1 3.2e-40 1.2e-38 125.0 0.0 10 271 108 392 101 393 0.81 # 22901 # 24340 # -1 # ID=1_41;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.343 1_39 - 227 T2SE PF00437.15 272 5.2e-29 93.4 0.0 1 1 1.7e-30 6.2e-29 93.1 0.0 103 250 51 198 25 214 0.77 # 20892 # 21572 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.391 1_56 - 320 StbA PF06406.6 318 7.5e-149 487.3 0.1 1 1 1.1e-150 8.6e-149 487.2 0.1 1 317 2 318 2 319 0.99 # 34058 # 35017 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.395 1_41 - 480 NACHT PF05729.7 166 0.00055 12.1 0.2 1 2 4e-05 0.003 9.7 0.0 4 29 248 273 246 280 0.86 # 22901 # 24340 # -1 # ID=1_41;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.343 1_41 - 480 NACHT PF05729.7 166 0.00055 12.1 0.2 2 2 0.057 4.3 -0.6 0.0 82 124 357 400 342 403 0.72 # 22901 # 24340 # -1 # ID=1_41;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.343 1_41 - 480 AAA_17 PF13207.1 121 7.2e-07 22.6 0.0 1 1 9.2e-08 3.4e-06 20.4 0.0 3 98 248 340 246 392 0.68 # 22901 # 24340 # -1 # ID=1_41;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.343 1_39 - 227 AAA_17 PF13207.1 121 0.00028 14.2 0.3 1 1 1.2e-05 0.00043 13.6 0.3 1 32 75 110 75 178 0.78 # 20892 # 21572 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.391 1_16 - 513 DZR PF12773.2 50 8.2e-05 14.9 0.7 1 1 2.1e-06 0.00016 14.0 0.7 10 41 115 166 110 170 0.88 # 8476 # 10014 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.594 1_26 - 314 Transposase_mut PF00872.13 381 2.2e-89 292.0 0.0 1 1 7.3e-91 2.7e-89 291.8 0.0 102 379 11 286 5 288 0.99 # 13816 # 14757 # -1 # ID=1_26;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.470 1_27 - 84 Transposase_mut PF00872.13 381 4.9e-11 34.2 0.0 1 1 1.5e-12 5.5e-11 34.0 0.0 8 88 9 83 3 83 0.89 # 14767 # 15018 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.492 1_39 - 227 AAA_25 PF13481.1 194 6.6e-05 14.9 0.0 1 1 1.3e-06 9.5e-05 14.3 0.0 32 59 72 99 52 130 0.89 # 20892 # 21572 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.391 1_39 - 227 Viral_helicase1 PF01443.13 234 0.00012 14.1 0.0 1 1 2.2e-06 0.00016 13.7 0.0 1 21 76 96 76 125 0.84 # 20892 # 21572 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.391 1_39 - 227 AAA_14 PF13173.1 128 1.7e-06 20.5 0.0 1 1 8.5e-08 3.2e-06 19.6 0.0 3 85 74 172 72 186 0.72 # 20892 # 21572 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.391 1_41 - 480 AAA_14 PF13173.1 128 1.3e-05 17.6 0.0 1 1 1.3e-06 4.8e-05 15.8 0.0 4 46 246 290 244 315 0.76 # 22901 # 24340 # -1 # ID=1_41;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.343 1_19 - 63 HTH_Tnp_ISL3 PF13542.1 52 6.9e-05 14.5 0.0 1 1 1.3e-06 9.6e-05 14.1 0.0 31 49 21 39 18 40 0.91 # 10877 # 11065 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.481 1_7 - 116 ACT_5 PF13710.1 63 9.9e-05 14.7 0.1 1 1 2.7e-06 0.0002 13.7 0.1 27 57 40 68 32 69 0.79 # 2193 # 2540 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.540 1_69 - 188 MTS PF05175.9 170 6.5e-10 31.1 0.0 1 1 1.2e-11 8.9e-10 30.7 0.0 31 141 50 149 41 166 0.84 # 43064 # 43627 # 1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.582 1_74 - 145 DDE_Tnp_IS1 PF03400.8 131 3.8e-79 255.7 0.8 1 1 5.7e-81 4.3e-79 255.5 0.8 1 131 14 144 14 144 0.99 # 46716 # 47150 # -1 # ID=1_74;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.554 1_24 - 92 zinc_ribbon_5 PF13719.1 37 8.7e-06 17.8 2.9 1 1 6.5e-07 2.4e-05 16.4 2.9 3 36 6 40 5 41 0.83 # 13194 # 13469 # -1 # ID=1_24;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_22 - 44 zinc_ribbon_5 PF13719.1 37 2.5e-05 16.4 4.9 1 1 1.1e-06 4.2e-05 15.6 4.9 3 36 6 39 4 40 0.96 # 11989 # 12120 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_7 - 116 Med9 PF07544.8 83 0.0002 13.6 2.9 1 3 0.0018 0.14 4.5 1.0 47 70 9 32 3 45 0.82 # 2193 # 2540 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.540 1_7 - 116 Med9 PF07544.8 83 0.0002 13.6 2.9 2 3 2.7e-06 0.0002 13.6 2.9 51 75 48 72 31 78 0.80 # 2193 # 2540 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.540 1_7 - 116 Med9 PF07544.8 83 0.0002 13.6 2.9 3 3 0.028 2.1 0.7 0.9 50 67 80 97 73 101 0.75 # 2193 # 2540 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.540 1_41 - 480 ATP_bind_1 PF03029.12 238 0.00035 12.6 0.0 1 1 1e-05 0.00077 11.5 0.0 1 32 249 281 249 325 0.62 # 22901 # 24340 # -1 # ID=1_41;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.343 1_39 - 227 DAP3 PF10236.4 309 0.00083 10.8 0.0 1 1 1.5e-05 0.0011 10.4 0.0 25 63 75 114 59 131 0.84 # 20892 # 21572 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.391 1_19 - 63 HTH_17 PF12728.2 51 0.00053 12.8 0.0 1 1 9.2e-06 0.00069 12.4 0.0 6 39 22 54 20 62 0.76 # 10877 # 11065 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.481 1_22 - 44 Zn-ribbon_8 PF09723.5 42 2e-06 20.3 3.6 1 2 8.6e-06 0.00065 12.2 0.1 26 40 5 19 1 20 0.87 # 11989 # 12120 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_22 - 44 Zn-ribbon_8 PF09723.5 42 2e-06 20.3 3.6 2 2 6.4e-05 0.0048 9.4 0.6 6 16 29 39 28 42 0.88 # 11989 # 12120 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_22 - 44 Zn_Tnp_IS1595 PF12760.2 46 1.3e-06 20.7 6.0 1 1 4e-08 1.5e-06 20.5 6.0 19 45 6 36 3 37 0.93 # 11989 # 12120 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_24 - 92 Zn_Tnp_IS1595 PF12760.2 46 0.00013 14.2 2.3 1 1 6.8e-06 0.00026 13.4 2.3 21 46 8 38 5 38 0.74 # 13194 # 13469 # -1 # ID=1_24;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_19 - 63 HTH_11 PF08279.7 55 3.2e-06 19.3 0.0 1 1 6.4e-08 4.8e-06 18.7 0.0 16 37 18 39 4 40 0.78 # 10877 # 11065 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.481 1_19 - 63 Sigma70_ECF PF07638.6 185 5.2e-05 15.5 0.0 1 1 7.2e-07 5.4e-05 15.4 0.0 143 174 9 40 2 53 0.86 # 10877 # 11065 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.481 1_22 - 44 Elf1 PF05129.8 81 6e-05 15.2 0.4 1 1 8.7e-07 6.5e-05 15.1 0.4 24 59 7 41 2 43 0.82 # 11989 # 12120 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_19 - 63 LacI PF00356.16 46 5.4e-05 15.3 0.0 1 1 8.9e-07 6.7e-05 15.0 0.0 2 34 20 52 19 60 0.92 # 10877 # 11065 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.481 1_19 - 63 HTH_Mga PF08280.6 59 0.00011 14.5 0.0 1 1 2.2e-06 0.00016 13.9 0.0 22 41 20 39 18 40 0.90 # 10877 # 11065 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.481 1_41 - 480 AAA_10 PF12846.2 304 3e-06 19.3 0.0 1 1 1.4e-07 5.1e-06 18.5 0.0 5 47 248 295 245 335 0.77 # 22901 # 24340 # -1 # ID=1_41;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.343 1_39 - 227 AAA_10 PF12846.2 304 8.3e-05 14.6 0.0 1 1 2.5e-06 9.4e-05 14.4 0.0 3 37 75 111 73 170 0.87 # 20892 # 21572 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.391 1_69 - 188 RrnaAD PF00398.15 262 7e-09 27.5 0.0 1 1 1.2e-10 9e-09 27.2 0.0 9 113 29 128 24 148 0.88 # 43064 # 43627 # 1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.582 1_69 - 188 Methyltransf_18 PF12847.2 112 2.2e-10 33.6 0.0 1 1 6.3e-12 4.7e-10 32.6 0.0 4 109 53 146 50 148 0.89 # 43064 # 43627 # 1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.582 1_38 - 204 DNA_RNApol_7kD PF03604.8 32 0.0008 11.4 2.0 1 2 0.0014 0.11 4.6 0.3 19 27 53 61 50 62 0.89 # 20130 # 20741 # -1 # ID=1_38;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.361 1_38 - 204 DNA_RNApol_7kD PF03604.8 32 0.0008 11.4 2.0 2 2 0.00056 0.042 5.9 0.1 19 27 78 86 74 88 0.86 # 20130 # 20741 # -1 # ID=1_38;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.361 1_16 - 513 AAA_13 PF13166.1 712 0.00027 11.9 0.1 1 1 3.7e-06 0.00027 11.9 0.1 362 438 6 82 1 102 0.91 # 8476 # 10014 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.594 1_24 - 92 DUF2387 PF09526.5 71 0.00013 14.4 0.2 1 1 2.3e-06 0.00017 14.0 0.2 10 47 7 47 5 72 0.76 # 13194 # 13469 # -1 # ID=1_24;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_26 - 314 MULE PF10551.4 93 1.2e-11 37.2 0.0 1 1 3.4e-13 2.5e-11 36.2 0.0 16 91 94 169 80 171 0.81 # 13816 # 14757 # -1 # ID=1_26;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.470 1_5 - 122 BrkDBD PF09607.5 58 4e-06 18.9 0.0 1 1 8.7e-08 6.5e-06 18.2 0.0 1 47 10 53 10 58 0.88 # 1382 # 1747 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.478 1_9 - 240 HTH_21 PF13276.1 60 3.5e-19 61.2 3.5 1 1 2.2e-20 8.2e-19 60.0 3.5 2 60 46 103 44 103 0.94 # 2891 # 3610 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.549 1_51 - 332 HTH_21 PF13276.1 60 4.8e-09 28.7 2.5 1 1 1.3e-10 4.8e-09 28.7 2.5 5 59 242 297 239 298 0.86 # 30581 # 31576 # -1 # ID=1_51;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.449 1_22 - 44 Zn_ribbon_recom PF13408.1 58 0.00034 13.4 1.7 1 1 5e-06 0.00038 13.3 1.7 6 34 6 36 3 41 0.79 # 11989 # 12120 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/8964c5e6-0be2-4e18-9add-7079ccfe7bf1 # Target file: checkm_output/bins/pm530/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm530/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/8964c5e6-0be2-4e18-9add-7079ccfe7bf1 checkm_output/bins/pm530/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:08:24 2017 # [ok]