# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_24 - 332 ATP-synt_ab PF00006.20 215 0.00029 12.4 0.0 1 1 8.8e-06 0.00047 11.7 0.0 16 62 159 205 151 247 0.86 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_24 - 332 KaiC PF06745.8 227 9.2e-05 13.6 0.0 1 1 3e-06 0.00016 12.8 0.0 16 53 155 190 148 240 0.77 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_24 - 332 ABC_tran PF00005.22 137 8.4e-07 21.4 0.0 1 1 5e-08 1.3e-06 20.8 0.0 6 45 153 192 150 257 0.87 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_17 - 867 ABC_tran PF00005.22 137 0.00037 12.9 0.0 1 1 4.6e-05 0.0012 11.2 0.0 14 38 494 518 481 550 0.83 # 8827 # 11427 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.497 1_2 - 146 HTH_22 PF13309.1 64 9.4e-05 14.2 0.0 1 1 3.6e-06 0.00019 13.2 0.0 45 63 110 128 108 129 0.90 # 1370 # 1807 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.553 1_43 - 422 HHH_5 PF14520.1 60 1.5e-07 23.6 0.6 1 1 7.4e-08 4e-06 19.0 0.6 8 55 181 278 177 282 0.65 # 32578 # 33843 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.535 1_24 - 332 Sigma54_activat PF00158.21 168 4.6e-06 18.2 0.0 1 1 3.1e-07 8.4e-06 17.4 0.0 14 54 150 190 138 213 0.82 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_27 - 1079 Sigma54_activat PF00158.21 168 9e-05 14.0 0.4 1 1 9.5e-06 0.00026 12.5 0.4 8 130 480 600 473 606 0.79 # 18791 # 22027 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_24 - 332 FtsK_SpoIIIE PF01580.13 205 4.7e-07 21.5 0.0 1 1 5.1e-08 9.2e-07 20.5 0.0 38 64 158 184 139 191 0.81 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_17 - 867 FtsK_SpoIIIE PF01580.13 205 6.3e-06 17.8 0.0 1 1 8.1e-07 1.5e-05 16.6 0.0 21 62 462 515 445 522 0.82 # 8827 # 11427 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.497 1_28 - 510 FtsK_SpoIIIE PF01580.13 205 0.00035 12.1 0.0 1 1 3.4e-05 0.00061 11.3 0.0 39 59 124 147 95 153 0.78 # 22027 # 23556 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.440 1_24 - 332 MobB PF03205.9 140 4.8e-06 18.4 1.9 1 1 1.5e-07 8.1e-06 17.6 0.3 2 39 160 196 159 201 0.83 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_2 - 146 HTH_8 PF02954.14 42 4.1e-06 18.4 1.0 1 2 0.0071 0.38 2.5 0.3 2 11 59 68 58 69 0.86 # 1370 # 1807 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.553 1_2 - 146 HTH_8 PF02954.14 42 4.1e-06 18.4 1.0 2 2 1.4e-06 7.3e-05 14.4 0.0 21 37 110 126 98 129 0.81 # 1370 # 1807 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.553 1_24 - 332 Myosin_head PF00063.16 689 8.5e-05 12.7 0.0 1 1 2.2e-06 0.00012 12.2 0.0 84 110 157 183 147 209 0.90 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_2 - 146 TetR_N PF00440.18 47 0.00019 13.1 0.0 1 1 8.5e-06 0.00046 11.9 0.0 15 36 106 127 99 127 0.89 # 1370 # 1807 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.553 2_2 - 107 AAA_19 PF13245.1 76 9.3e-05 14.2 0.0 1 1 9.9e-06 0.00018 13.3 0.0 15 34 5 23 2 41 0.84 # 111 # 431 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_24 - 332 AAA_19 PF13245.1 76 0.00034 12.4 0.1 1 1 4.2e-05 0.00075 11.3 0.1 5 48 153 191 149 224 0.78 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_27 - 1079 AAA_19 PF13245.1 76 0.0013 10.6 3.7 1 2 0.00084 0.015 7.2 0.2 2 75 485 551 484 552 0.75 # 18791 # 22027 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_27 - 1079 AAA_19 PF13245.1 76 0.0013 10.6 3.7 2 2 0.041 0.74 1.7 0.0 17 32 706 721 705 731 0.82 # 18791 # 22027 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_46 - 240 Rep_3 PF01051.16 222 6.1e-44 142.2 0.4 1 1 1.3e-45 7e-44 142.0 0.4 2 213 8 227 7 233 0.92 # 35701 # 36420 # 1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.440 4_1 - 235 rve PF00665.21 120 1.8e-13 42.7 0.1 1 2 0.015 0.8 1.9 0.0 78 102 27 49 6 54 0.84 # 53 # 757 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 4_1 - 235 rve PF00665.21 120 1.8e-13 42.7 0.1 2 2 6.1e-14 3.3e-12 38.7 0.0 9 119 75 182 70 183 0.89 # 53 # 757 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_24 - 332 AAA_23 PF13476.1 202 0.00024 13.5 0.0 1 1 1.4e-05 0.00039 12.8 0.0 19 39 158 178 105 184 0.91 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_17 - 867 AAA_23 PF13476.1 202 0.0026 10.1 0.0 1 1 9.5e-05 0.0026 10.1 0.0 22 39 494 511 464 521 0.84 # 8827 # 11427 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.497 2_2 - 107 AAA_24 PF13479.1 213 2.2e-05 16.1 0.0 1 1 4.5e-07 2.4e-05 16.0 0.0 6 33 3 34 1 77 0.89 # 111 # 431 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_24 - 332 Zeta_toxin PF06414.7 201 8.4e-07 20.3 0.0 1 1 5.4e-08 1.4e-06 19.5 0.0 12 51 154 193 145 204 0.86 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_2 - 107 Zeta_toxin PF06414.7 201 2.6e-05 15.4 0.0 1 1 3.3e-06 9e-05 13.6 0.0 19 53 3 35 1 101 0.82 # 111 # 431 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_27 - 1079 AAA_30 PF13604.1 196 1.1e-53 173.7 7.6 1 1 1.5e-54 4.2e-53 171.9 6.4 1 192 477 660 477 663 0.97 # 18791 # 22027 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_24 - 332 AAA_30 PF13604.1 196 8.2e-05 14.3 0.1 1 2 4.7e-05 0.0013 10.4 0.1 11 51 151 190 145 197 0.80 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_24 - 332 AAA_30 PF13604.1 196 8.2e-05 14.3 0.1 2 2 0.024 0.64 1.6 0.0 121 178 204 258 191 272 0.77 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 4_1 - 235 HTH_Tnp_1 PF01527.15 76 0.00013 13.9 0.3 1 1 1.1e-05 0.00029 12.9 0.3 4 51 6 58 4 63 0.79 # 53 # 757 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_2 - 146 HTH_Tnp_1 PF01527.15 76 0.00016 13.7 0.0 1 1 1.1e-05 0.00029 12.9 0.0 20 50 104 133 92 143 0.75 # 1370 # 1807 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.553 1_28 - 510 TraG-D_C PF12696.2 128 7.3e-22 69.7 0.0 1 1 2.2e-23 1.2e-21 69.0 0.0 1 127 350 471 350 472 0.80 # 22027 # 23556 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.440 4_1 - 235 DDE_3 PF13358.1 146 0.00037 12.3 0.0 1 1 2.1e-05 0.0011 10.7 0.0 32 90 82 141 59 146 0.87 # 53 # 757 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 2_2 - 107 TIGR03263 TIGR03263 180 0.00027 12.3 0.0 1 1 6.9e-06 0.00037 11.9 0.0 3 26 2 25 1 31 0.81 # 111 # 431 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.567 2_4 - 307 DDE_Tnp_1 PF01609.16 213 5e-24 77.0 0.0 1 1 1.4e-25 7.6e-24 76.4 0.0 4 185 91 300 88 305 0.94 # 1447 # 2367 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.442 1_27 - 1079 AAA PF00004.24 132 1.8e-06 20.2 0.9 1 1 1.3e-07 7e-06 18.3 0.1 4 111 500 600 497 612 0.73 # 18791 # 22027 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_24 - 332 Parvo_NS1 PF01057.12 272 0.00046 11.1 0.0 1 1 1.4e-05 0.00077 10.4 0.0 104 138 148 182 140 188 0.90 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_27 - 1079 Herpes_Helicase PF02689.9 819 1.2e-05 15.3 0.0 1 2 0.0014 0.074 2.7 0.0 173 208 539 574 515 584 0.81 # 18791 # 22027 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_27 - 1079 Herpes_Helicase PF02689.9 819 1.2e-05 15.3 0.0 2 2 9.3e-06 0.0005 9.9 0.0 739 782 850 894 831 914 0.80 # 18791 # 22027 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_27 - 1079 Torsin PF06309.6 127 1.1e-05 17.3 0.0 1 1 6.1e-07 3.3e-05 15.8 0.0 19 85 460 526 452 537 0.83 # 18791 # 22027 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_24 - 332 cobW PF02492.14 178 1.2e-06 20.1 0.0 1 1 8.2e-08 2.2e-06 19.2 0.0 3 45 161 202 159 257 0.77 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_2 - 107 cobW PF02492.14 178 0.00023 12.7 0.0 1 1 1.2e-05 0.00031 12.2 0.0 2 22 2 22 1 30 0.79 # 111 # 431 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_24 - 332 AAA_16 PF13191.1 185 3.6e-07 22.3 0.0 1 1 5.1e-08 9.3e-07 21.0 0.0 24 61 158 195 149 274 0.82 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_2 - 107 AAA_16 PF13191.1 185 0.00045 12.3 0.0 1 1 2.6e-05 0.00046 12.2 0.0 27 51 3 27 1 79 0.76 # 111 # 431 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_17 - 867 AAA_16 PF13191.1 185 0.00053 12.0 0.0 1 1 0.00027 0.0049 8.9 0.0 25 47 492 514 481 574 0.85 # 8827 # 11427 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.497 1_24 - 332 AAA_22 PF13401.1 131 1.5e-07 23.7 0.0 1 1 2.4e-08 3.3e-07 22.6 0.0 3 54 157 202 153 241 0.74 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_2 - 107 AAA_22 PF13401.1 131 9e-06 17.9 0.0 1 1 8.7e-07 1.2e-05 17.5 0.0 6 35 2 31 1 77 0.73 # 111 # 431 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_17 - 867 AAA_22 PF13401.1 131 5.8e-05 15.3 0.0 1 1 0.0001 0.0014 10.9 0.0 5 28 492 515 489 549 0.85 # 8827 # 11427 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.497 1_27 - 1079 AAA_22 PF13401.1 131 0.00035 12.8 0.2 1 1 0.0003 0.004 9.3 0.2 4 125 494 598 490 603 0.81 # 18791 # 22027 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_24 - 332 AAA_29 PF13555.1 62 0.00054 11.6 0.0 1 1 2.3e-05 0.0013 10.4 0.0 19 43 157 178 145 188 0.75 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_2 - 107 AAA_28 PF13521.1 163 5.9e-05 15.1 0.0 1 1 1.5e-06 8.2e-05 14.6 0.0 2 32 3 36 2 79 0.76 # 111 # 431 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.567 4_1 - 235 HTH_32 PF13565.1 77 7e-07 22.1 0.2 1 1 5.6e-08 3e-06 20.0 0.0 26 76 5 50 2 51 0.83 # 53 # 757 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 4_1 - 235 HTH_23 PF13384.1 50 3.3e-06 18.8 0.7 1 2 0.032 0.85 1.6 0.0 7 27 11 35 7 36 0.69 # 53 # 757 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 4_1 - 235 HTH_23 PF13384.1 50 3.3e-06 18.8 0.7 2 2 3.7e-06 0.0001 14.0 0.1 28 42 41 55 40 62 0.87 # 53 # 757 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_2 - 146 HTH_23 PF13384.1 50 4.9e-05 15.0 0.0 1 1 3.5e-06 9.5e-05 14.1 0.0 4 38 94 128 91 140 0.83 # 1370 # 1807 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.553 1_2 - 146 HTH_7 PF02796.10 45 7.2e-07 21.1 0.1 1 1 3.4e-08 1.8e-06 19.8 0.1 19 40 105 126 86 131 0.71 # 1370 # 1807 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.553 1_2 - 146 HTH_29 PF13551.1 112 7.2e-06 18.2 1.1 1 2 0.0029 0.15 4.3 0.2 36 61 70 94 63 105 0.78 # 1370 # 1807 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.553 1_2 - 146 HTH_29 PF13551.1 112 7.2e-06 18.2 1.1 2 2 6e-06 0.00032 12.9 0.0 10 42 103 137 95 145 0.72 # 1370 # 1807 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.553 4_1 - 235 DDE_Tnp_IS66 PF03050.9 271 1.3e-12 39.5 0.3 1 1 3e-14 1.6e-12 39.2 0.3 5 132 10 144 6 174 0.87 # 53 # 757 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_24 - 332 Arch_ATPase PF01637.13 234 4.7e-06 18.4 0.0 1 1 1.6e-07 8.7e-06 17.6 0.0 15 68 155 205 149 226 0.87 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_27 - 1079 PhoH PF02562.11 205 1.8e-09 29.2 4.8 1 2 9.6e-07 2.6e-05 15.5 0.4 5 39 478 514 475 536 0.80 # 18791 # 22027 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_27 - 1079 PhoH PF02562.11 205 1.8e-09 29.2 4.8 2 2 3e-06 8.2e-05 13.9 0.1 120 162 562 605 553 635 0.82 # 18791 # 22027 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_24 - 332 PhoH PF02562.11 205 0.00017 12.9 0.0 1 1 1.1e-05 0.0003 12.1 0.0 14 45 153 184 143 210 0.79 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_44 - 264 SprT-like PF10263.4 157 2.1e-37 120.3 0.0 1 1 5.3e-39 2.9e-37 119.8 0.0 1 150 12 236 12 262 0.92 # 33994 # 34785 # 1 # ID=1_44;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 1_24 - 332 ResIII PF04851.10 184 3.3e-06 19.0 0.0 1 1 9.8e-08 5.3e-06 18.4 0.0 22 61 148 196 104 202 0.81 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_28 - 510 TrwB_AAD_bind PF10412.4 386 5.7e-119 389.1 0.0 1 1 3.7e-120 6.7e-119 388.9 0.0 1 385 112 490 112 491 0.95 # 22027 # 23556 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.440 1_17 - 867 TrwB_AAD_bind PF10412.4 386 5e-07 20.6 1.6 1 2 1.5e-06 2.7e-05 14.9 0.0 16 51 492 527 484 536 0.92 # 8827 # 11427 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.497 1_17 - 867 TrwB_AAD_bind PF10412.4 386 5e-07 20.6 1.6 2 2 0.0042 0.076 3.5 0.0 102 168 741 806 720 812 0.79 # 8827 # 11427 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.497 1_24 - 332 TrwB_AAD_bind PF10412.4 386 7.4e-06 16.8 0.1 1 1 6.4e-07 1.1e-05 16.1 0.1 14 49 157 191 150 202 0.81 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_2 - 107 AAA_18 PF13238.1 129 4.9e-08 25.4 0.0 1 1 2.9e-09 5.2e-08 25.3 0.0 1 31 3 44 3 99 0.69 # 111 # 431 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_24 - 332 AAA_18 PF13238.1 129 2.5e-06 19.9 0.0 1 1 2.9e-07 5.3e-06 18.8 0.0 1 29 161 194 161 213 0.77 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_28 - 510 AAA_18 PF13238.1 129 6.9e-05 15.2 0.0 1 1 7.8e-06 0.00014 14.2 0.0 3 21 131 149 130 238 0.78 # 22027 # 23556 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.440 1_43 - 422 IMS_HHH PF11798.3 32 2.5e-07 22.6 0.0 1 1 1.4e-08 7.3e-07 21.2 0.0 4 32 171 199 168 199 0.85 # 32578 # 33843 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.535 1_24 - 332 GvpD PF07088.6 484 1.4e-06 18.9 0.0 1 1 3.9e-08 2.1e-06 18.3 0.0 10 89 158 241 150 262 0.76 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_24 - 332 DUF258 PF03193.11 161 6e-05 14.3 0.0 1 1 2e-06 0.00011 13.5 0.0 29 61 151 184 129 224 0.81 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_28 - 510 DUF87 PF01935.12 229 6e-08 24.8 0.0 1 1 3.4e-09 9.2e-08 24.2 0.0 10 68 116 170 109 262 0.85 # 22027 # 23556 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.440 1_24 - 332 DUF87 PF01935.12 229 1.4e-06 20.3 0.0 1 1 9.7e-08 2.6e-06 19.4 0.0 9 61 144 195 138 196 0.78 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 4_1 - 235 HTH_28 PF13518.1 52 3.1e-05 16.0 1.2 1 1 5.1e-06 0.00014 14.0 1.2 22 36 40 54 13 55 0.76 # 53 # 757 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_2 - 146 HTH_28 PF13518.1 52 0.00012 14.2 0.0 1 1 1.1e-05 0.00029 12.9 0.0 13 33 108 128 96 129 0.72 # 1370 # 1807 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.553 1_24 - 332 Sigma54_activ_2 PF14532.1 138 1.3e-06 20.6 0.0 1 1 1e-07 2.7e-06 19.5 0.0 14 65 151 202 145 212 0.92 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_2 - 107 Sigma54_activ_2 PF14532.1 138 0.00071 11.7 0.0 1 1 3.2e-05 0.00087 11.4 0.0 24 57 3 35 1 50 0.83 # 111 # 431 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_24 - 332 MMR_HSR1 PF01926.18 116 0.00024 13.2 0.0 1 1 7.1e-06 0.00038 12.5 0.0 2 41 161 205 160 310 0.84 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_24 - 332 DEAD PF00270.24 169 1.6e-06 19.7 0.0 1 1 5.7e-08 3.1e-06 18.8 0.0 13 70 157 211 144 242 0.78 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_3 - 464 UPF0236 PF06782.6 470 8.4e-07 19.7 0.7 1 1 6.3e-08 3.4e-06 17.7 0.4 334 406 364 441 257 448 0.70 # 1831 # 3222 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.516 1_24 - 332 DUF2075 PF09848.4 352 4.9e-05 14.4 0.0 1 1 1.3e-06 7e-05 13.9 0.0 1 32 158 187 158 216 0.76 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_27 - 1079 UvrD_C_2 PF13538.1 104 1.4e-16 52.6 0.1 1 1 1e-17 5.6e-16 50.7 0.1 2 102 797 896 796 898 0.76 # 18791 # 22027 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_24 - 332 T2SE PF00437.15 272 1.7e-52 170.0 0.1 1 1 7.4e-54 2e-52 169.7 0.1 3 271 10 311 8 312 0.94 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_28 - 510 T2SE PF00437.15 272 0.00047 11.1 0.1 1 1 3.1e-05 0.00083 10.3 0.1 130 149 128 147 103 160 0.84 # 22027 # 23556 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.440 2_2 - 107 NACHT PF05729.7 166 1.1e-05 17.1 0.0 1 1 6.4e-07 1.7e-05 16.5 0.0 2 22 2 22 1 38 0.89 # 111 # 431 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_24 - 332 NACHT PF05729.7 166 4.8e-05 15.1 0.0 1 1 3.8e-06 0.0001 14.0 0.0 1 27 159 185 159 188 0.90 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_24 - 332 UPF0079 PF02367.12 123 3.3e-06 18.8 0.0 1 1 2.5e-07 6.6e-06 17.8 0.0 9 45 152 188 145 193 0.85 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_2 - 107 UPF0079 PF02367.12 123 5.1e-05 15.0 0.0 1 1 2.8e-06 7.7e-05 14.4 0.0 17 36 2 21 1 31 0.88 # 111 # 431 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.567 2_2 - 107 AAA_17 PF13207.1 121 4.7e-07 22.7 0.0 1 1 5e-08 6.7e-07 22.2 0.0 1 32 2 34 2 104 0.60 # 111 # 431 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_24 - 332 AAA_17 PF13207.1 121 0.00022 14.1 0.1 1 1 3.8e-05 0.00051 12.9 0.1 2 40 161 195 160 229 0.75 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_28 - 510 AAA_17 PF13207.1 121 0.0003 13.7 0.1 1 1 9e-05 0.0012 11.7 0.0 4 42 131 191 129 260 0.58 # 22027 # 23556 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.440 1_17 - 867 AAA_17 PF13207.1 121 0.00051 12.9 4.9 1 1 0.0003 0.0041 10.0 0.0 3 21 495 513 494 565 0.80 # 8827 # 11427 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.497 1_24 - 332 AAA_7 PF12775.2 272 5.3e-05 14.4 0.0 1 1 2.3e-06 0.00013 13.2 0.0 25 64 150 189 139 209 0.86 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_24 - 332 TIGR03346 TIGR03346 853 7.9e-05 12.8 0.0 1 1 2e-06 0.00011 12.3 0.0 598 641 161 204 149 238 0.89 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_27 - 1079 Viral_helicase1 PF01443.13 234 3.7e-15 48.0 5.4 1 2 2.3e-08 1.2e-06 20.2 0.0 3 104 499 605 497 654 0.74 # 18791 # 22027 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_27 - 1079 Viral_helicase1 PF01443.13 234 3.7e-15 48.0 5.4 2 2 3e-11 1.6e-09 29.6 0.5 157 234 818 899 774 899 0.74 # 18791 # 22027 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_24 - 332 Pox_A32 PF04665.7 241 5.4e-05 14.6 0.0 1 1 1.7e-06 9.2e-05 13.8 0.0 12 46 157 191 150 210 0.85 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_28 - 510 AAA_14 PF13173.1 128 6.7e-06 18.1 0.0 1 2 6.5e-06 0.00012 14.1 0.0 6 89 130 213 125 234 0.76 # 22027 # 23556 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.440 1_28 - 510 AAA_14 PF13173.1 128 6.7e-06 18.1 0.0 2 2 0.065 1.2 1.1 0.0 53 81 340 372 300 391 0.57 # 22027 # 23556 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.440 1_24 - 332 AAA_14 PF13173.1 128 0.00015 13.7 0.1 1 2 0.0067 0.12 4.3 0.0 64 96 135 165 98 166 0.69 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_24 - 332 AAA_14 PF13173.1 128 0.00015 13.7 0.1 2 2 9.5e-05 0.0017 10.3 0.0 2 35 158 191 157 213 0.80 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_2 - 107 AAA_14 PF13173.1 128 0.00015 13.7 0.0 1 1 1.6e-05 0.00028 12.8 0.0 4 27 2 25 1 43 0.76 # 111 # 431 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_2 - 146 Mga PF05043.8 87 1.3e-05 17.5 0.0 1 1 3.3e-07 1.8e-05 17.1 0.0 18 56 95 133 57 144 0.86 # 1370 # 1807 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.553 2_2 - 107 AAA_33 PF13671.1 143 9.8e-07 20.8 0.0 1 1 4.5e-08 1.2e-06 20.5 0.0 2 101 3 104 2 105 0.70 # 111 # 431 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_24 - 332 AAA_33 PF13671.1 143 0.0002 13.3 0.0 1 1 1.2e-05 0.00032 12.6 0.0 2 26 161 188 160 256 0.81 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_28 - 510 T4SS-DNA_transf PF02534.9 469 2.9e-12 37.8 0.0 1 1 7.9e-14 4.3e-12 37.3 0.0 263 426 313 472 297 500 0.74 # 22027 # 23556 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.440 1_24 - 332 RNA_helicase PF00910.17 107 1.1e-05 17.7 0.1 1 2 7e-06 0.00019 13.7 0.0 1 25 161 185 161 242 0.75 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_24 - 332 RNA_helicase PF00910.17 107 1.1e-05 17.7 0.1 2 2 0.054 1.5 1.2 0.1 69 100 290 322 281 328 0.78 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_2 - 107 RNA_helicase PF00910.17 107 0.00013 14.2 0.0 1 1 6.7e-06 0.00018 13.7 0.0 1 26 3 28 3 51 0.84 # 111 # 431 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_24 - 332 AAA_2 PF07724.9 171 3.1e-06 19.2 0.0 1 1 1e-07 5.5e-06 18.4 0.0 3 54 158 204 156 216 0.89 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_2 - 107 APS_kinase PF01583.15 157 0.00011 13.9 0.0 1 1 3e-06 0.00016 13.4 0.0 4 24 2 22 1 37 0.87 # 111 # 431 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_6 - 47 DDE_Tnp_IS1 PF03400.8 131 5.2e-24 76.9 0.6 1 1 9.9e-26 5.3e-24 76.8 0.6 88 131 3 46 1 46 0.97 # 4643 # 4783 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.447 4_1 - 235 DDE_Tnp_IS240 PF13610.1 140 4.1e-53 171.2 0.0 1 1 1.1e-54 5.7e-53 170.7 0.0 4 139 75 212 73 213 0.99 # 53 # 757 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_2 - 146 HTH_26 PF13443.1 63 6.1e-05 15.3 0.0 1 1 2.3e-06 0.00012 14.3 0.0 1 31 95 128 95 137 0.88 # 1370 # 1807 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.553 2_2 - 107 PduV-EutP PF10662.4 143 0.00039 12.0 0.0 1 1 7.7e-06 0.00042 11.9 0.0 5 25 4 24 1 65 0.86 # 111 # 431 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_2 - 146 HTH_17 PF12728.2 51 0.00045 12.6 0.0 1 1 4.5e-05 0.0024 10.2 0.0 7 23 113 129 109 142 0.81 # 1370 # 1807 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.553 1_30 - 141 RuvA_C PF07499.8 47 0.00085 11.6 0.8 1 2 0.01 0.56 2.5 0.3 39 46 6 13 5 14 0.92 # 24487 # 24909 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.433 1_30 - 141 RuvA_C PF07499.8 47 0.00085 11.6 0.8 2 2 0.00038 0.021 7.1 0.0 11 25 21 35 21 36 0.92 # 24487 # 24909 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.433 1_2 - 146 HTH_11 PF08279.7 55 2.8e-06 19.0 0.0 1 1 1.5e-07 8.3e-06 17.5 0.0 14 37 106 129 98 142 0.85 # 1370 # 1807 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.553 1_27 - 1079 PIF1 PF05970.9 364 1.1e-06 19.8 0.1 1 2 1.3e-07 7.2e-06 17.1 0.0 2 65 478 537 477 588 0.85 # 18791 # 22027 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_27 - 1079 PIF1 PF05970.9 364 1.1e-06 19.8 0.1 2 2 0.089 4.8 -2.1 0.0 334 363 795 823 783 824 0.84 # 18791 # 22027 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_2 - 146 HTH_5 PF01022.15 47 0.00038 12.2 0.0 1 1 1.2e-05 0.00066 11.4 0.0 12 36 104 128 92 138 0.84 # 1370 # 1807 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.553 1_27 - 1079 Helicase_RecD PF05127.9 177 1.1e-05 17.2 4.8 1 2 0.00059 0.032 5.9 0.1 122 146 498 522 481 539 0.76 # 18791 # 22027 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_27 - 1079 Helicase_RecD PF05127.9 177 1.1e-05 17.2 4.8 2 2 8.1e-06 0.00044 12.0 0.1 75 114 548 585 529 653 0.69 # 18791 # 22027 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_17 - 867 AAA_10 PF12846.2 304 1.3e-35 115.3 0.1 1 1 2.4e-36 4.3e-35 113.6 0.0 2 292 492 772 491 780 0.84 # 8827 # 11427 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.497 1_28 - 510 AAA_10 PF12846.2 304 2.9e-07 22.2 0.1 1 2 2.1e-05 0.00037 12.0 0.1 3 41 128 166 126 177 0.92 # 22027 # 23556 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.440 1_28 - 510 AAA_10 PF12846.2 304 2.9e-07 22.2 0.1 2 2 0.00034 0.0061 8.0 0.0 214 286 339 414 307 431 0.75 # 22027 # 23556 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.440 1_24 - 332 AAA_10 PF12846.2 304 0.00014 13.3 0.0 1 1 1.2e-05 0.00022 12.7 0.0 3 29 160 185 158 233 0.81 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_2 - 146 HTH_20 PF12840.2 61 0.00011 14.1 0.1 1 1 6.5e-06 0.00035 12.5 0.0 27 46 110 129 94 130 0.88 # 1370 # 1807 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.553 2_4 - 307 Dimerisation PF08100.6 51 0.00013 13.9 0.2 1 1 2e-05 0.0011 10.9 0.0 16 47 29 65 27 66 0.80 # 1447 # 2367 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.442 1_24 - 332 IstB_IS21 PF01695.12 178 1.5e-05 16.5 0.0 1 1 4.5e-07 2.4e-05 15.8 0.0 44 73 155 184 127 201 0.82 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_43 - 422 DNA_pol_lambd_f PF10391.4 52 1.2e-06 20.1 0.1 1 2 3e-07 1.6e-05 16.5 0.0 6 35 182 211 180 216 0.84 # 32578 # 33843 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.535 1_43 - 422 DNA_pol_lambd_f PF10391.4 52 1.2e-06 20.1 0.1 2 2 0.048 2.6 -0.2 0.0 6 20 265 279 256 283 0.80 # 32578 # 33843 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.535 1_24 - 332 GTP_EFTU PF00009.22 188 0.00012 13.6 0.2 1 1 3.5e-06 0.00019 12.9 0.2 2 32 157 187 156 205 0.83 # 16463 # 17458 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/9c40c4de-d566-450a-8b0f-ca6bfb031dc3 # Target file: checkm_output/bins/pm512/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm512/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/9c40c4de-d566-450a-8b0f-ca6bfb031dc3 checkm_output/bins/pm512/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:07:47 2017 # [ok]