# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_1 - 226 Cons_hypoth95 PF03602.10 183 7.6e-06 17.9 0.0 1 2 0.0003 0.023 6.6 0.0 113 146 19 54 5 82 0.66 # 2 # 679 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.578 1_1 - 226 Cons_hypoth95 PF03602.10 183 7.6e-06 17.9 0.0 2 2 4e-05 0.003 9.5 0.0 41 62 162 183 145 218 0.78 # 2 # 679 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.578 1_8 - 92 Zn_Tnp_IS1 PF03811.8 36 6e-24 75.8 4.5 1 1 1.6e-25 1.2e-23 74.9 4.5 1 36 1 36 1 36 0.99 # 6344 # 6619 # -1 # ID=1_8;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.533 1_1 - 226 TIGR00095 TIGR00095 194 0.00012 13.9 0.0 1 2 0.00076 0.057 5.2 0.0 124 138 20 34 3 79 0.72 # 2 # 679 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.578 1_1 - 226 TIGR00095 TIGR00095 194 0.00012 13.9 0.0 2 2 0.00024 0.018 6.8 0.0 53 86 164 199 155 218 0.77 # 2 # 679 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.578 1_40 - 877 FtsK_SpoIIIE PF01580.13 205 1.1e-05 17.5 0.1 1 2 2e-06 0.00015 13.7 0.0 39 63 477 505 464 508 0.84 # 36816 # 39446 # -1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_40 - 877 FtsK_SpoIIIE PF01580.13 205 1.1e-05 17.5 0.1 2 2 0.015 1.1 1.1 0.0 75 166 531 626 530 669 0.82 # 36816 # 39446 # -1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_40 - 877 MobB PF03205.9 140 0.00055 12.2 0.1 1 1 5.4e-05 0.002 10.3 0.0 4 37 484 516 482 524 0.79 # 36816 # 39446 # -1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_22 - 742 MobB PF03205.9 140 0.00078 11.7 0.0 1 1 5.3e-05 0.002 10.4 0.0 7 34 192 219 188 225 0.89 # 20347 # 22572 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 1_20 - 1632 AAA_19 PF13245.1 76 1.2e-07 24.0 2.0 1 1 1e-08 3.9e-07 22.3 0.5 7 76 856 922 849 922 0.74 # 15078 # 19973 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.602 1_45 - 123 AAA_19 PF13245.1 76 0.0005 12.3 0.0 1 1 2.2e-05 0.00081 11.7 0.0 13 37 91 115 82 122 0.78 # 41582 # 41950 # -1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_45 - 123 KTI12 PF08433.5 270 0.00063 11.4 0.1 1 1 1.4e-05 0.0011 10.7 0.1 5 30 92 117 91 120 0.87 # 41582 # 41950 # -1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_1 - 226 MethyltransfD12 PF02086.10 260 0.00041 12.3 0.0 1 2 0.022 1.6 0.5 0.0 178 188 21 31 14 91 0.83 # 2 # 679 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.578 1_1 - 226 MethyltransfD12 PF02086.10 260 0.00041 12.3 0.0 2 2 3.9e-05 0.003 9.5 0.0 20 46 163 189 148 197 0.78 # 2 # 679 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.578 1_6 - 235 rve PF00665.21 120 2.4e-13 42.8 0.1 1 2 0.015 1.1 1.9 0.0 78 102 27 49 6 54 0.84 # 4853 # 5557 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.528 1_6 - 235 rve PF00665.21 120 2.4e-13 42.8 0.1 2 2 6.1e-14 4.6e-12 38.7 0.0 9 119 75 182 70 183 0.89 # 4853 # 5557 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.528 3_9 - 188 Methyltransf_26 PF13659.1 117 3.5e-14 45.4 0.0 1 1 1.6e-15 5.9e-14 44.6 0.0 2 114 52 147 51 150 0.90 # 5720 # 6283 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.580 1_1 - 226 Methyltransf_26 PF13659.1 117 1.1e-12 40.6 0.1 1 2 6.9e-08 2.6e-06 20.0 0.0 54 114 4 71 2 74 0.73 # 2 # 679 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.578 1_1 - 226 Methyltransf_26 PF13659.1 117 1.1e-12 40.6 0.1 2 2 2e-07 7.5e-06 18.5 0.0 4 45 167 207 164 221 0.82 # 2 # 679 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.578 1_20 - 1632 AAA_30 PF13604.1 196 1e-44 144.9 15.6 1 3 0.037 1.4 0.9 0.0 41 86 98 144 93 157 0.84 # 15078 # 19973 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.602 1_20 - 1632 AAA_30 PF13604.1 196 1e-44 144.9 15.6 2 3 1.7e-05 0.00065 11.8 3.9 7 146 295 426 291 436 0.81 # 15078 # 19973 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.602 1_20 - 1632 AAA_30 PF13604.1 196 1e-44 144.9 15.6 3 3 8.9e-44 3.3e-42 136.7 1.9 1 186 843 1031 843 1037 0.94 # 15078 # 19973 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.602 1_22 - 742 AAA_30 PF13604.1 196 0.00047 12.3 0.0 1 1 2.6e-05 0.00098 11.2 0.0 21 57 188 224 180 230 0.85 # 20347 # 22572 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 1_6 - 235 HTH_Tnp_1 PF01527.15 76 0.00018 14.0 0.3 1 1 5.4e-06 0.0004 12.9 0.3 4 51 6 58 4 63 0.79 # 4853 # 5557 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.528 1_22 - 742 TraG-D_C PF12696.2 128 5.8e-21 67.2 0.0 1 1 1.4e-22 1.1e-20 66.4 0.0 1 127 419 541 419 542 0.86 # 20347 # 22572 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 1_6 - 235 DDE_3 PF13358.1 146 0.00052 12.3 0.0 1 1 2.1e-05 0.0016 10.7 0.0 32 90 82 141 59 146 0.87 # 4853 # 5557 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.528 1_1 - 226 UPF0020 PF01170.13 180 5.3e-06 18.6 0.0 1 2 0.00032 0.012 7.7 0.0 104 119 18 33 7 88 0.73 # 2 # 679 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.578 1_1 - 226 UPF0020 PF01170.13 180 5.3e-06 18.6 0.0 2 2 0.00012 0.0047 9.0 0.0 28 54 163 189 158 220 0.67 # 2 # 679 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.578 3_9 - 188 UPF0020 PF01170.13 180 0.00065 11.8 0.0 1 1 5.8e-05 0.0022 10.1 0.0 18 43 40 65 32 130 0.71 # 5720 # 6283 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.580 3_9 - 188 Methyltransf_25 PF13649.1 101 9.1e-05 15.3 0.0 1 1 1.8e-06 0.00013 14.8 0.0 1 101 54 142 54 142 0.81 # 5720 # 6283 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.580 1_47 - 484 DivIC PF04977.10 80 0.0007 11.6 4.6 1 1 1.9e-05 0.0014 10.7 4.6 17 66 76 124 72 125 0.92 # 42445 # 43896 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.578 2_5 - 655 KorB PF08535.5 93 3.6e-05 16.4 0.0 1 1 1.4e-06 0.0001 14.9 0.0 2 42 152 192 151 205 0.91 # 2098 # 4062 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.588 1_1 - 226 N6_N4_Mtase PF01555.13 231 4.7e-37 120.1 0.0 1 2 1.3e-15 9.5e-14 43.9 0.0 1 114 21 124 21 133 0.89 # 2 # 679 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.578 1_1 - 226 N6_N4_Mtase PF01555.13 231 4.7e-37 120.1 0.0 2 2 5.3e-25 4e-23 74.6 0.0 169 228 141 200 126 203 0.90 # 2 # 679 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.578 1_2 - 206 Hydantoinase_A PF01968.13 290 3.2e-05 15.6 0.1 1 2 0.02 1.5 0.3 0.0 153 175 129 151 51 155 0.81 # 1195 # 1812 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.416 1_2 - 206 Hydantoinase_A PF01968.13 290 3.2e-05 15.6 0.1 2 2 1.8e-06 0.00014 13.5 0.1 68 97 156 183 149 190 0.81 # 1195 # 1812 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.416 1_22 - 742 AAA_16 PF13191.1 185 3.2e-06 19.7 0.0 1 1 4.1e-07 1.5e-05 17.5 0.0 21 60 182 222 179 263 0.81 # 20347 # 22572 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 1_45 - 123 AAA_16 PF13191.1 185 0.001 11.6 0.1 1 1 4.6e-05 0.0017 10.8 0.1 22 48 86 112 80 119 0.88 # 41582 # 41950 # -1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_26 - 941 Orn_Arg_deC_N PF02784.11 251 0.00076 11.2 0.0 1 1 1e-05 0.00076 11.2 0.0 171 212 610 650 598 684 0.76 # 24844 # 27666 # -1 # ID=1_26;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.512 1_6 - 235 HTH_32 PF13565.1 77 9.6e-07 22.1 0.2 1 1 5.6e-08 4.2e-06 20.0 0.0 26 76 5 50 2 51 0.83 # 4853 # 5557 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.528 2_5 - 655 HTH_23 PF13384.1 50 2.1e-07 23.0 0.1 1 1 1.7e-07 4.2e-06 18.9 0.0 12 40 148 176 141 180 0.92 # 2098 # 4062 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.588 1_6 - 235 HTH_23 PF13384.1 50 5.9e-06 18.4 0.5 1 2 0.047 1.2 1.6 0.0 7 27 11 35 7 36 0.69 # 4853 # 5557 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.528 1_6 - 235 HTH_23 PF13384.1 50 5.9e-06 18.4 0.5 2 2 5.6e-06 0.00014 14.0 0.1 28 42 41 55 40 62 0.87 # 4853 # 5557 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.528 1_8 - 92 HTH_23 PF13384.1 50 1.7e-05 17.0 0.0 1 1 1.1e-06 2.7e-05 16.3 0.0 7 40 53 86 51 90 0.93 # 6344 # 6619 # -1 # ID=1_8;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.533 1_8 - 92 zinc_ribbon_4 PF13717.1 36 4.2e-05 15.7 4.1 1 1 1.6e-06 0.00012 14.3 4.1 3 35 6 39 5 40 0.86 # 6344 # 6619 # -1 # ID=1_8;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.533 2_5 - 655 HTH_29 PF13551.1 112 0.00047 12.8 0.0 1 1 3.3e-05 0.0025 10.5 0.0 8 36 150 177 143 213 0.89 # 2098 # 4062 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.588 3_9 - 188 Met_10 PF02475.11 200 0.00065 11.8 0.0 1 1 1.1e-05 0.00084 11.4 0.0 98 189 47 132 29 145 0.78 # 5720 # 6283 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.580 1_6 - 235 DDE_Tnp_IS66 PF03050.9 271 2e-12 39.3 0.6 1 1 3.7e-14 2.8e-12 38.9 0.4 5 131 10 143 6 158 0.86 # 4853 # 5557 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.528 3_9 - 188 Methyltransf_31 PF13847.1 152 2.5e-07 22.9 0.0 1 1 4.2e-09 3.1e-07 22.6 0.0 5 119 52 162 48 183 0.84 # 5720 # 6283 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.580 1_22 - 742 TrwB_AAD_bind PF10412.4 386 2.8e-150 492.7 0.0 1 1 9.1e-152 3.4e-150 492.4 0.0 2 386 172 561 171 561 0.99 # 20347 # 22572 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 1_40 - 877 TrwB_AAD_bind PF10412.4 386 4e-07 21.4 0.2 1 2 4.8e-08 1.8e-06 19.2 0.0 15 53 480 518 471 548 0.80 # 36816 # 39446 # -1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_40 - 877 TrwB_AAD_bind PF10412.4 386 4e-07 21.4 0.2 2 2 0.054 2 -0.7 0.1 261 317 714 770 706 773 0.92 # 36816 # 39446 # -1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_1 - 226 Methyltransf_15 PF09445.5 164 0.00021 13.4 0.0 1 2 0.012 0.92 1.5 0.0 53 79 4 29 2 33 0.91 # 2 # 679 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.578 1_1 - 226 Methyltransf_15 PF09445.5 164 0.00021 13.4 0.0 2 2 4.3e-05 0.0032 9.5 0.0 3 31 166 194 164 208 0.86 # 2 # 679 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.578 3_9 - 188 Methyltransf_12 PF08242.7 99 1.3e-05 18.1 0.0 1 1 3.1e-07 2.3e-05 17.3 0.0 1 99 55 144 55 144 0.87 # 5720 # 6283 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.580 1_8 - 92 HTH_Tnp_IS1 PF12759.2 46 1.5e-31 100.1 0.2 1 1 3.2e-33 2.4e-31 99.5 0.2 1 46 43 88 43 88 0.99 # 6344 # 6619 # -1 # ID=1_8;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.533 3_9 - 188 Methyltrans_SAM PF10672.4 286 0.00054 11.3 0.0 1 1 9.9e-06 0.00074 10.9 0.0 196 261 113 173 93 180 0.78 # 5720 # 6283 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.580 1_40 - 877 DUF87 PF01935.12 229 1.7e-07 23.7 0.0 1 1 6.9e-09 5.2e-07 22.2 0.0 26 222 483 670 469 677 0.77 # 36816 # 39446 # -1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_6 - 235 HTH_28 PF13518.1 52 4.3e-05 16.0 1.2 1 1 5.1e-06 0.00019 14.0 1.2 22 36 40 54 13 55 0.76 # 4853 # 5557 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.528 1_8 - 92 HTH_28 PF13518.1 52 6.6e-05 15.4 0.0 1 1 2.7e-06 0.0001 14.8 0.0 4 35 55 86 53 90 0.90 # 6344 # 6619 # -1 # ID=1_8;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.533 3_9 - 188 TIGR03533 TIGR03533 284 1.2e-05 16.9 0.0 1 1 2.6e-07 2e-05 16.2 0.0 114 210 43 133 36 141 0.86 # 5720 # 6283 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.580 3_9 - 188 TIGR03534 TIGR03534 253 2.7e-08 25.7 0.0 1 1 4.3e-10 3.3e-08 25.4 0.0 81 175 45 131 15 148 0.86 # 5720 # 6283 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.580 1_20 - 1632 UvrD_C_2 PF13538.1 104 7.8e-08 25.0 0.7 1 2 0.012 0.89 2.3 0.0 6 44 1102 1140 1098 1170 0.74 # 15078 # 19973 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.602 1_20 - 1632 UvrD_C_2 PF13538.1 104 7.8e-08 25.0 0.7 2 2 4.8e-08 3.6e-06 19.6 0.2 3 102 1216 1319 1214 1321 0.77 # 15078 # 19973 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.602 3_9 - 188 TIGR00755 TIGR00755 256 2.7e-09 28.8 0.0 1 1 4.9e-11 3.7e-09 28.4 0.0 8 105 29 123 25 134 0.91 # 5720 # 6283 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.580 1_2 - 206 StbA PF06406.6 318 1.5e-104 341.8 0.2 1 1 2.4e-106 1.8e-104 341.6 0.2 1 197 1 197 1 202 0.98 # 1195 # 1812 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.416 1_22 - 742 AAA_17 PF13207.1 121 0.00024 14.4 0.0 1 1 8.7e-06 0.00066 13.0 0.0 3 28 189 218 187 303 0.70 # 20347 # 22572 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 1_20 - 1632 Viral_helicase1 PF01443.13 234 0.00024 13.1 0.0 1 2 0.00013 0.0096 7.9 0.0 1 118 863 996 863 1087 0.52 # 15078 # 19973 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.602 1_20 - 1632 Viral_helicase1 PF01443.13 234 0.00024 13.1 0.0 2 2 0.006 0.45 2.4 0.0 171 234 1262 1322 1217 1322 0.63 # 15078 # 19973 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.602 1_40 - 877 Pox_A32 PF04665.7 241 0.00055 11.7 0.1 1 1 2.3e-05 0.0017 10.1 0.0 7 38 474 505 470 520 0.85 # 36816 # 39446 # -1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_22 - 742 T4SS-DNA_transf PF02534.9 469 5.5e-10 30.8 0.0 1 1 3.5e-11 1.3e-09 29.6 0.0 264 363 382 478 198 511 0.82 # 20347 # 22572 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 1_40 - 877 T4SS-DNA_transf PF02534.9 469 0.00024 12.2 0.0 1 2 0.0047 0.18 2.8 0.0 105 182 534 605 471 624 0.82 # 36816 # 39446 # -1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_40 - 877 T4SS-DNA_transf PF02534.9 469 0.00024 12.2 0.0 2 2 0.00023 0.0085 7.1 0.0 319 378 712 770 663 772 0.91 # 36816 # 39446 # -1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 3_9 - 188 MTS PF05175.9 170 6.5e-10 31.1 0.0 1 1 1.2e-11 8.8e-10 30.7 0.0 31 141 50 149 41 166 0.84 # 5720 # 6283 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.580 1_8 - 92 zinc_ribbon_5 PF13719.1 37 8.5e-06 17.9 2.9 1 1 3.2e-07 2.4e-05 16.4 2.9 3 36 6 40 5 41 0.83 # 6344 # 6619 # -1 # ID=1_8;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.533 1_6 - 235 DDE_Tnp_IS240 PF13610.1 140 1.6e-53 172.9 0.1 1 1 3e-55 2.3e-53 172.5 0.1 4 139 75 212 73 213 0.99 # 4853 # 5557 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.528 1_8 - 92 Zn_Tnp_IS1595 PF12760.2 46 0.00013 14.3 2.3 1 1 3.4e-06 0.00026 13.4 2.3 21 46 8 38 5 38 0.74 # 6344 # 6619 # -1 # ID=1_8;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.533 1_40 - 877 AAA_10 PF12846.2 304 3.1e-49 160.5 0.0 1 1 1.5e-50 5.5e-49 159.6 0.0 1 294 480 769 480 775 0.89 # 36816 # 39446 # -1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_22 - 742 AAA_10 PF12846.2 304 1.1e-10 33.9 0.0 1 1 6.2e-11 2.3e-09 29.5 0.0 3 296 187 494 186 500 0.68 # 20347 # 22572 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 3_9 - 188 RrnaAD PF00398.15 262 8.3e-09 27.3 0.0 1 1 1.4e-10 1.1e-08 26.9 0.0 9 113 29 128 24 148 0.87 # 5720 # 6283 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.580 3_9 - 188 Methyltransf_18 PF12847.2 112 1.4e-10 34.3 0.0 1 1 3.9e-12 2.9e-10 33.3 0.0 4 109 53 146 50 148 0.90 # 5720 # 6283 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.580 1_8 - 92 DUF2387 PF09526.5 71 0.00013 14.4 0.2 1 1 2.3e-06 0.00017 14.0 0.2 10 47 7 47 5 72 0.76 # 6344 # 6619 # -1 # ID=1_8;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.533 1_20 - 1632 AAA_11 PF13086.1 236 0.00014 13.9 0.0 1 1 1.9e-06 0.00014 13.9 0.0 2 75 844 914 843 934 0.81 # 15078 # 19973 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.602 2_7 - 147 SSB PF00436.20 104 6.2e-28 89.3 0.6 1 1 1.2e-29 9.2e-28 88.7 0.6 26 101 2 80 1 83 0.93 # 4414 # 4854 # -1 # ID=2_7;partial=00;start_type=GTG;rbs_motif=GGxGG;rbs_spacer=3-4bp;gc_cont=0.583 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/df29a6e1-286d-49ce-9be0-3628d0223bc3 # Target file: checkm_output/bins/pm486/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm486/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/df29a6e1-286d-49ce-9be0-3628d0223bc3 checkm_output/bins/pm486/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:07:11 2017 # [ok]