# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_21 - 96 HTH_IclR PF09339.5 52 0.00046 12.0 0.1 1 1 1.4e-05 0.0008 11.2 0.1 5 38 31 66 28 66 0.82 # 13522 # 13809 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.535 1_41 - 429 Fe-ADH_2 PF13685.1 250 3.4e-05 15.4 0.1 1 1 9.1e-07 5.4e-05 14.7 0.1 74 109 94 131 43 139 0.73 # 27183 # 28469 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.566 1_21 - 96 HTH_38 PF13936.1 44 4.3e-05 15.2 0.1 1 1 1.1e-06 6.3e-05 14.7 0.1 11 39 36 65 30 66 0.89 # 13522 # 13809 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.535 1_21 - 96 MarR PF01047.17 59 2.7e-05 16.0 0.0 1 1 6.7e-07 3.9e-05 15.5 0.0 7 37 36 66 30 66 0.83 # 13522 # 13809 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.535 1_58 - 277 CbiA PF01656.18 195 7.3e-30 95.9 0.0 1 1 1.5e-31 9e-30 95.7 0.0 5 174 2 209 1 229 0.79 # 53346 # 54176 # -1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.484 1_36 - 67 zf-ribbon_3 PF13248.1 26 0.00042 11.7 9.4 1 2 0.00036 0.021 6.3 0.1 19 26 6 13 3 13 0.83 # 22122 # 22322 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_36 - 67 zf-ribbon_3 PF13248.1 26 0.00042 11.7 9.4 2 2 4e-05 0.0024 9.4 1.7 4 21 33 49 30 49 0.89 # 22122 # 22322 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_14 - 203 TIGR00573 TIGR00573 217 4.8e-18 57.2 0.3 1 1 1.1e-18 6.4e-17 53.6 0.3 9 104 21 112 17 200 0.66 # 11149 # 11757 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.504 1_25 - 354 Methyltransf_26 PF13659.1 117 1.5e-16 52.6 0.1 1 2 3e-13 1.8e-11 36.3 0.0 51 116 9 82 3 83 0.84 # 15066 # 16127 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.524 1_25 - 354 Methyltransf_26 PF13659.1 117 1.5e-16 52.6 0.1 2 2 2.5e-06 0.00015 14.0 0.0 1 35 309 342 309 351 0.91 # 15066 # 16127 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.524 1_58 - 277 MipZ PF09140.6 261 0.00037 11.8 0.0 1 2 0.00017 0.0098 7.1 0.0 8 47 3 42 1 54 0.90 # 53346 # 54176 # -1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.484 1_58 - 277 MipZ PF09140.6 261 0.00037 11.8 0.0 2 2 0.0033 0.2 2.8 0.0 87 126 112 151 86 241 0.70 # 53346 # 54176 # -1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.484 1_25 - 354 UPF0020 PF01170.13 180 3.4e-05 15.6 0.2 1 2 3.3e-05 0.0019 9.9 0.0 89 116 12 38 1 52 0.68 # 15066 # 16127 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.524 1_25 - 354 UPF0020 PF01170.13 180 3.4e-05 15.6 0.2 2 2 0.003 0.18 3.5 0.0 26 49 306 328 299 347 0.81 # 15066 # 16127 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.524 1_36 - 67 zinc-ribbons_6 PF07191.7 70 0.0019 10.2 5.9 1 2 0.00013 0.0079 8.2 0.6 18 35 4 21 2 24 0.90 # 22122 # 22322 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_36 - 67 zinc-ribbons_6 PF07191.7 70 0.0019 10.2 5.9 2 2 0.0014 0.084 4.9 0.6 16 35 30 49 25 54 0.77 # 22122 # 22322 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_21 - 96 Sigma70_r4 PF04545.11 50 9.9e-05 13.8 0.0 1 1 2.5e-06 0.00015 13.3 0.0 9 41 31 67 28 71 0.84 # 13522 # 13809 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.535 1_36 - 67 Ribosomal_L28 PF00830.14 61 0.013 7.6 6.2 1 2 0.0094 0.55 2.4 0.6 2 24 5 28 4 31 0.75 # 22122 # 22322 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_36 - 67 Ribosomal_L28 PF00830.14 61 0.013 7.6 6.2 2 2 0.00011 0.0067 8.5 0.7 2 26 33 57 32 59 0.85 # 22122 # 22322 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_21 - 96 HTH_37 PF13744.1 80 1.6e-12 39.3 0.0 1 1 3.3e-14 2e-12 39.0 0.0 18 78 33 92 23 94 0.94 # 13522 # 13809 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.535 1_10 - 1325 Herpes_ori_bp PF02399.10 824 1.1e-08 25.6 0.0 1 2 1.8e-08 1.1e-06 19.0 0.0 44 198 521 675 493 685 0.80 # 4887 # 8861 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.537 1_10 - 1325 Herpes_ori_bp PF02399.10 824 1.1e-08 25.6 0.0 2 2 0.00051 0.03 4.3 0.0 271 351 721 812 699 816 0.76 # 4887 # 8861 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.537 1_25 - 354 N6_N4_Mtase PF01555.13 231 1.1e-43 141.5 0.0 1 1 5.1e-45 3e-43 140.0 0.0 2 229 30 346 29 348 0.88 # 15066 # 16127 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.524 1_12 - 78 P22_Cro PF14549.1 60 1.3e-22 71.5 0.0 1 1 2.5e-24 1.5e-22 71.4 0.0 1 56 10 67 10 73 0.93 # 9777 # 10010 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.504 1_11 - 203 HTH_25 PF13413.1 62 3.2e-07 22.1 0.0 1 1 1.9e-08 5.7e-07 21.3 0.0 1 35 11 45 11 50 0.96 # 9112 # 9720 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 1_21 - 96 HTH_25 PF13413.1 62 2.3e-05 16.2 0.0 1 1 1.6e-06 4.8e-05 15.2 0.0 1 32 37 68 37 73 0.94 # 13522 # 13809 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.535 1_38 - 570 Terminase_1 PF03354.10 477 4.7e-112 366.9 0.0 1 1 9.1e-114 5.4e-112 366.7 0.0 1 476 82 554 82 555 0.92 # 23007 # 24716 # 1 # ID=1_38;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.502 1_36 - 67 A2L_zn_ribbon PF08792.5 33 0.00023 12.9 2.3 1 2 0.00041 0.012 7.4 0.2 1 11 1 11 1 13 0.83 # 22122 # 22322 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_36 - 67 A2L_zn_ribbon PF08792.5 33 0.00023 12.9 2.3 2 2 0.0018 0.053 5.3 0.2 5 11 33 39 29 41 0.81 # 22122 # 22322 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_32 - 403 A2L_zn_ribbon PF08792.5 33 0.01 7.6 6.0 1 1 0.00067 0.02 6.7 6.0 5 31 333 360 331 361 0.93 # 18452 # 19660 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.517 1_11 - 203 HTH_3 PF01381.17 55 1.2e-13 42.9 0.1 1 1 6.7e-15 2e-13 42.2 0.1 1 55 12 66 12 66 0.98 # 9112 # 9720 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 1_21 - 96 HTH_3 PF01381.17 55 2.4e-13 41.9 0.1 1 1 1.3e-14 3.9e-13 41.3 0.1 1 49 38 86 38 91 0.94 # 13522 # 13809 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.535 1_21 - 96 HTH_23 PF13384.1 50 2.6e-05 16.0 0.0 1 1 1.2e-06 7.1e-05 14.6 0.0 9 36 33 65 26 67 0.80 # 13522 # 13809 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.535 1_21 - 96 HTH_19 PF12844.2 64 2.9e-11 35.5 0.0 1 1 1.4e-12 4.1e-11 35.0 0.0 2 55 36 89 35 92 0.91 # 13522 # 13809 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.535 1_11 - 203 HTH_19 PF12844.2 64 5.6e-09 28.2 0.0 1 1 3e-10 8.9e-09 27.5 0.0 1 57 9 65 9 72 0.86 # 9112 # 9720 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 1_24 - 77 FeoC PF09012.5 69 9.4e-05 14.3 0.0 1 1 2.3e-06 0.00014 13.8 0.0 5 39 18 52 16 59 0.92 # 14518 # 14748 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.545 1_32 - 403 OrfB_Zn_ribbon PF07282.6 69 1.9e-26 83.8 0.7 1 1 3.1e-28 1.9e-26 83.8 0.7 1 67 304 371 304 373 0.98 # 18452 # 19660 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.517 1_36 - 67 TIGR00595 TIGR00595 509 0.00018 11.9 4.9 1 1 3.4e-06 0.0002 11.8 4.9 216 264 3 52 1 58 0.87 # 22122 # 22322 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_58 - 277 TIGR01968 TIGR01968 261 5.2e-07 21.0 0.1 1 2 0.00032 0.019 6.1 0.0 8 37 2 31 1 34 0.93 # 53346 # 54176 # -1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.484 1_58 - 277 TIGR01968 TIGR01968 261 5.2e-07 21.0 0.1 2 2 2.8e-06 0.00017 12.8 0.1 102 143 114 154 109 164 0.83 # 53346 # 54176 # -1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.484 1_14 - 203 TIGR01406 TIGR01406 231 9.1e-16 50.0 0.1 1 1 2.6e-17 1.6e-15 49.2 0.1 2 99 21 112 20 193 0.89 # 11149 # 11757 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.504 1_21 - 96 HTH_24 PF13412.1 48 5.6e-07 21.1 0.0 1 1 3.4e-08 1e-06 20.3 0.0 8 36 37 65 31 66 0.93 # 13522 # 13809 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.535 1_24 - 77 HTH_24 PF13412.1 48 2.6e-05 15.8 0.0 1 1 1.2e-06 3.4e-05 15.4 0.0 14 40 24 50 20 52 0.84 # 14518 # 14748 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.545 1_25 - 354 TIGR03534 TIGR03534 253 0.00025 12.4 0.2 1 1 1.4e-05 0.00083 10.7 0.1 136 173 6 47 1 102 0.74 # 15066 # 16127 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.524 1_32 - 403 TIGR00344 TIGR00344 847 6.1e-06 16.5 1.1 1 1 1.5e-07 8.9e-06 15.9 1.1 684 778 185 276 169 293 0.78 # 18452 # 19660 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.517 1_21 - 96 HTH_31 PF13560.1 64 1.5e-12 39.7 0.0 1 1 6.9e-14 2e-12 39.4 0.0 4 57 36 88 33 92 0.94 # 13522 # 13809 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.535 1_11 - 203 HTH_31 PF13560.1 64 4e-10 32.0 0.1 1 1 2.3e-11 6.7e-10 31.3 0.1 3 55 9 60 8 65 0.93 # 9112 # 9720 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 1_32 - 403 HTH_OrfB_IS605 PF12323.3 46 1.3e-16 51.9 1.2 1 1 4.6e-18 2.7e-16 50.9 1.2 1 46 1 48 1 48 0.94 # 18452 # 19660 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.517 1_54 - 204 Lambda_tail_I PF06805.7 82 6.1e-18 56.7 0.0 1 1 1.5e-19 8.8e-18 56.2 0.0 4 82 10 92 7 92 0.97 # 37052 # 37663 # 1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.474 1_36 - 67 DZR PF12773.2 50 0.00012 14.0 7.1 1 1 8.9e-06 0.00052 12.0 7.1 14 47 5 48 2 50 0.82 # 22122 # 22322 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_58 - 277 VirC1 PF07015.6 231 2.6e-06 18.8 0.3 1 2 4.5e-05 0.0026 9.0 0.0 8 42 2 36 1 42 0.93 # 53346 # 54176 # -1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.484 1_58 - 277 VirC1 PF07015.6 231 2.6e-06 18.8 0.3 2 2 0.00015 0.0088 7.2 0.3 83 198 123 237 111 267 0.73 # 53346 # 54176 # -1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.484 1_25 - 354 MTS PF05175.9 170 0.00016 13.2 0.0 1 1 6.1e-06 0.00036 12.1 0.0 73 154 3 97 1 107 0.73 # 15066 # 16127 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.524 1_21 - 96 HTH_26 PF13443.1 63 1.5e-08 27.0 0.0 1 1 4.7e-10 2.8e-08 26.1 0.0 5 55 41 90 37 91 0.89 # 13522 # 13809 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.535 1_12 - 78 HTH_17 PF12728.2 51 9.2e-06 18.1 0.0 1 1 3.4e-07 2e-05 17.0 0.0 4 31 21 48 20 63 0.88 # 9777 # 10010 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.504 1_36 - 67 TF_Zn_Ribbon PF08271.7 43 0.00032 12.2 1.4 1 2 0.00093 0.055 5.1 0.2 20 28 4 12 2 22 0.76 # 22122 # 22322 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_36 - 67 TF_Zn_Ribbon PF08271.7 43 0.00032 12.2 1.4 2 2 0.00042 0.025 6.2 0.1 16 26 28 38 26 39 0.89 # 22122 # 22322 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_21 - 96 HTH_11 PF08279.7 55 0.00033 12.5 0.0 1 1 1.1e-05 0.00067 11.5 0.0 3 34 32 65 30 65 0.85 # 13522 # 13809 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.535 1_21 - 96 MarR_2 PF12802.2 62 1.3e-06 20.3 0.0 1 1 3e-08 1.8e-06 19.8 0.0 9 41 36 66 31 66 0.92 # 13522 # 13809 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.535 1_36 - 67 zinc_ribbon_2 PF13240.1 23 0.022 6.6 13.7 1 3 0.00025 0.015 7.1 0.3 16 22 6 12 3 13 0.75 # 22122 # 22322 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_36 - 67 zinc_ribbon_2 PF13240.1 23 0.022 6.6 13.7 2 3 0.00015 0.0089 7.8 0.3 16 20 34 38 29 41 0.71 # 22122 # 22322 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_36 - 67 zinc_ribbon_2 PF13240.1 23 0.022 6.6 13.7 3 3 0.038 2.3 0.2 0.1 12 18 43 49 42 49 0.68 # 22122 # 22322 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_14 - 203 RNase_T PF00929.19 164 1.4e-27 89.1 0.2 1 1 2.3e-28 1.4e-26 85.9 0.2 1 163 22 192 22 193 0.91 # 11149 # 11757 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.504 1_36 - 67 DNA_RNApol_7kD PF03604.8 32 0.00025 12.7 3.7 1 2 0.00083 0.049 5.4 0.3 20 27 6 13 4 14 0.88 # 22122 # 22322 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_36 - 67 DNA_RNApol_7kD PF03604.8 32 0.00025 12.7 3.7 2 2 9.8e-05 0.0058 8.4 0.3 13 24 27 38 17 39 0.83 # 22122 # 22322 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_25 - 354 Methyltransf_11 PF08241.7 95 0.00015 14.4 0.0 1 1 3.6e-05 0.0022 10.7 0.0 69 95 53 79 1 79 0.67 # 15066 # 16127 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.524 1_58 - 277 ArsA_ATPase PF02374.10 305 5.5e-07 21.0 0.1 1 2 8.4e-07 4.9e-05 14.6 0.0 7 36 2 31 1 40 0.88 # 53346 # 54176 # -1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.484 1_58 - 277 ArsA_ATPase PF02374.10 305 5.5e-07 21.0 0.1 2 2 0.0016 0.092 3.8 0.0 125 136 122 133 112 143 0.84 # 53346 # 54176 # -1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.484 1_58 - 277 AAA_31 PF13614.1 157 3e-07 22.7 0.0 1 2 6.2e-07 3.6e-05 15.9 0.0 7 51 2 46 1 85 0.90 # 53346 # 54176 # -1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.484 1_58 - 277 AAA_31 PF13614.1 157 3e-07 22.7 0.0 2 2 0.0016 0.096 4.8 0.0 115 151 118 156 94 161 0.81 # 53346 # 54176 # -1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.484 1_36 - 67 Zn_ribbon_recom PF13408.1 58 0.0021 10.5 10.5 1 1 5.1e-05 0.003 10.0 10.5 8 42 6 50 3 60 0.78 # 22122 # 22322 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.567 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/0ff619eb-63bd-4fff-8289-96cfde57dc7e # Target file: checkm_output/bins/pm476/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm476/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/0ff619eb-63bd-4fff-8289-96cfde57dc7e checkm_output/bins/pm476/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:06:59 2017 # [ok]