# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_1 - 286 Peptidase_M66 PF10462.4 305 2.2e-06 18.3 1.8 1 1 9.4e-08 3.9e-06 17.5 1.8 166 222 170 230 161 236 0.69 # 1 # 858 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.437 1_18 - 518 BcrAD_BadFG PF01869.15 271 1.6e-08 25.8 0.8 1 2 3.7e-09 1.5e-07 22.5 0.2 1 80 5 77 5 86 0.85 # 11945 # 13498 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.356 1_18 - 518 BcrAD_BadFG PF01869.15 271 1.6e-08 25.8 0.8 2 2 0.016 0.64 0.8 0.0 3 16 273 286 273 420 0.49 # 11945 # 13498 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.356 1_3 - 207 rve_3 PF13683.1 67 6.3e-20 62.2 0.1 1 1 3.1e-21 1.3e-19 61.2 0.1 3 67 131 195 129 195 0.96 # 1716 # 2336 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 1_10 - 87 HTH_40 PF14493.1 91 1.4e-05 17.0 0.0 1 1 3.8e-07 1.6e-05 16.8 0.0 7 42 27 62 21 85 0.84 # 5985 # 6245 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.314 1_10 - 87 HTH_38 PF13936.1 44 2.6e-06 18.6 0.0 1 1 9.4e-08 3.9e-06 18.1 0.0 12 42 25 55 17 56 0.81 # 5985 # 6245 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.314 1_18 - 518 FGGY_N PF00370.16 245 8.2e-05 13.6 0.5 1 1 4.9e-06 0.0002 12.3 0.5 3 33 5 35 3 82 0.88 # 11945 # 13498 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.356 2_9 - 191 CbiA PF01656.18 195 8.6e-22 69.1 0.0 1 1 3e-23 1.2e-21 68.6 0.0 1 164 3 152 3 174 0.81 # 4622 # 5194 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.564 1_10 - 87 Sigma70_r4_2 PF08281.7 54 1.3e-09 29.1 0.0 1 1 8.6e-11 1.8e-09 28.7 0.0 9 48 17 55 15 60 0.92 # 5985 # 6245 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.314 1_17 - 228 Sigma70_r4_2 PF08281.7 54 8.2e-06 16.9 0.0 1 1 8e-07 1.6e-05 16.0 0.0 24 48 164 188 154 189 0.88 # 11146 # 11829 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.335 1_1 - 286 Peptidase_M10 PF00413.19 154 4e-06 18.3 0.9 1 1 6.9e-07 2.8e-05 15.5 0.9 86 127 184 226 73 236 0.53 # 1 # 858 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.437 1_3 - 207 rve PF00665.21 120 7e-22 69.5 0.0 1 1 2.6e-23 1e-21 68.9 0.0 5 119 39 157 35 158 0.96 # 1716 # 2336 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 2_9 - 191 YhjQ PF06564.7 244 0.0003 11.8 1.5 1 2 4.8e-05 0.002 9.1 1.3 4 62 3 63 1 82 0.73 # 4622 # 5194 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.564 2_9 - 191 YhjQ PF06564.7 244 0.0003 11.8 1.5 2 2 0.0078 0.32 1.9 0.0 106 145 71 108 54 114 0.77 # 4622 # 5194 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.564 1_6 - 89 HTH_Tnp_1 PF01527.15 76 4e-19 60.1 0.1 1 1 2.3e-20 4.7e-19 59.9 0.1 2 62 18 85 17 88 0.87 # 3257 # 3523 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.551 1_2 - 50 HTH_Tnp_1 PF01527.15 76 3.1e-11 34.8 0.1 1 1 1.6e-12 3.2e-11 34.8 0.1 25 55 2 40 1 49 0.68 # 1237 # 1386 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_10 - 87 GerE PF00196.14 58 1.8e-13 41.3 0.1 1 1 1.1e-14 2.2e-13 41.1 0.1 2 45 17 60 16 72 0.92 # 5985 # 6245 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.314 1_17 - 228 GerE PF00196.14 58 1.6e-11 35.1 1.1 1 2 0.012 0.24 2.5 0.1 41 56 121 136 119 138 0.86 # 11146 # 11829 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.335 1_17 - 228 GerE PF00196.14 58 1.6e-11 35.1 1.1 2 2 1.2e-11 2.6e-10 31.2 0.1 2 52 150 200 149 205 0.93 # 11146 # 11829 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.335 2_9 - 191 MipZ PF09140.6 261 1.1e-14 45.7 0.4 1 1 8.5e-15 3.5e-13 40.8 0.4 2 129 2 111 1 136 0.85 # 4622 # 5194 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.564 3_2 - 277 DDE_Tnp_1 PF01609.16 213 3e-20 64.3 0.4 1 1 9.6e-22 3.9e-20 63.9 0.4 3 206 74 247 72 253 0.82 # 1458 # 2288 # -1 # ID=3_2;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.513 1_1 - 286 Reprolysin_5 PF13688.1 196 5.4e-10 31.1 0.1 1 1 2.6e-11 1.1e-09 30.2 0.1 4 189 88 249 85 255 0.75 # 1 # 858 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.437 1_17 - 228 Sigma70_r4 PF04545.11 50 0.0001 13.3 0.1 1 1 8.3e-06 0.00034 11.6 0.0 19 40 165 186 153 193 0.83 # 11146 # 11829 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.335 1_1 - 286 Peptidase_M43 PF05572.8 154 0.00022 12.5 0.0 1 1 8.9e-06 0.00037 11.8 0.0 57 88 192 223 139 238 0.79 # 1 # 858 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.437 1_18 - 518 Hydantoinase_A PF01968.13 290 8e-58 187.4 4.3 1 2 0.00078 0.032 4.9 0.2 81 97 6 22 4 40 0.78 # 11945 # 13498 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.356 1_18 - 518 Hydantoinase_A PF01968.13 290 8e-58 187.4 4.3 2 2 2.7e-58 1.1e-56 183.6 0.6 1 286 193 447 193 451 0.96 # 11945 # 13498 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.356 1_2 - 50 MerR_1 PF13411.1 69 0.00038 11.9 0.0 1 1 1.1e-05 0.00046 11.6 0.0 1 24 1 24 1 30 0.95 # 1237 # 1386 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.567 2_9 - 191 SRP54 PF00448.17 196 0.0005 11.2 0.8 1 1 1.7e-05 0.00071 10.7 0.8 11 97 11 94 2 104 0.75 # 4622 # 5194 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.564 2_15 - 121 MRP-L47 PF06984.8 87 0.00013 13.5 0.1 1 1 4.1e-06 0.00017 13.2 0.1 26 84 49 108 20 110 0.87 # 8422 # 8784 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.380 1_6 - 89 HTH_23 PF13384.1 50 1.1e-09 29.5 0.0 1 1 1.5e-10 1.5e-09 29.0 0.0 3 47 24 69 22 72 0.89 # 3257 # 3523 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.551 1_10 - 87 HTH_23 PF13384.1 50 1.4e-06 19.6 0.0 1 1 1.8e-07 1.8e-06 19.2 0.0 8 35 24 51 18 64 0.89 # 5985 # 6245 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.314 1_17 - 228 HTH_23 PF13384.1 50 2e-06 19.1 0.0 1 1 3.6e-07 3.7e-06 18.2 0.0 8 46 157 196 153 199 0.80 # 11146 # 11829 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.335 1_2 - 50 HTH_23 PF13384.1 50 3.1e-06 18.5 0.0 1 1 3.7e-07 3.8e-06 18.2 0.0 19 47 2 30 1 33 0.85 # 1237 # 1386 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_10 - 87 HTH_7 PF02796.10 45 0.00044 11.8 0.0 1 1 1.7e-05 0.00068 11.2 0.0 5 38 18 50 17 50 0.87 # 5985 # 6245 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.314 1_18 - 518 TIGR00174 TIGR00174 288 0.00034 11.2 0.1 1 1 1.5e-05 0.00061 10.4 0.1 38 116 357 433 327 477 0.78 # 11945 # 13498 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.356 1_17 - 228 FeoC PF09012.5 69 0.00026 12.4 0.0 1 1 1.5e-05 0.00061 11.2 0.0 13 61 165 210 155 216 0.80 # 11146 # 11829 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.335 1_6 - 89 HTH_29 PF13551.1 112 1.4e-06 20.1 0.1 1 1 1.4e-07 2.9e-06 19.1 0.0 8 45 36 72 28 88 0.82 # 3257 # 3523 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.551 1_2 - 50 HTH_29 PF13551.1 112 8.4e-06 17.6 0.0 1 1 4.1e-07 8.4e-06 17.6 0.0 14 46 2 34 1 49 0.83 # 1237 # 1386 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_1 - 286 Reprolysin_4 PF13583.1 206 2.8e-09 28.4 0.6 1 1 1.3e-10 5.1e-09 27.5 0.6 7 170 91 231 84 253 0.73 # 1 # 858 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.437 2_9 - 191 TIGR01968 TIGR01968 261 2.3e-09 28.3 0.8 1 2 5.3e-09 2.2e-07 21.8 0.7 3 39 2 38 1 45 0.95 # 4622 # 5194 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.564 2_9 - 191 TIGR01968 TIGR01968 261 2.3e-09 28.3 0.8 2 2 0.00073 0.03 4.9 0.0 100 161 69 130 59 168 0.83 # 4622 # 5194 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.564 1_18 - 518 MutL PF13941.1 457 2e-10 31.1 1.4 1 2 1.9e-06 7.9e-05 12.7 0.2 3 54 5 50 4 70 0.88 # 11945 # 13498 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.356 1_18 - 518 MutL PF13941.1 457 2e-10 31.1 1.4 2 2 7.9e-08 3.2e-06 17.2 0.1 239 275 258 295 240 304 0.76 # 11945 # 13498 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.356 1_17 - 228 HTH_psq PF05225.11 45 9.8e-05 13.6 0.0 1 1 5.2e-06 0.00022 12.5 0.0 22 41 172 191 165 194 0.87 # 11146 # 11829 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.335 1_1 - 286 Reprolysin PF01421.14 199 9.7e-07 20.2 0.4 1 1 1.2e-07 4.8e-06 17.9 0.4 4 153 90 226 88 248 0.73 # 1 # 858 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.437 2_16 - 104 DUF87 PF01935.12 229 3e-05 15.5 0.1 1 1 8.8e-07 3.6e-05 15.3 0.1 102 160 30 86 25 101 0.71 # 8797 # 9108 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.349 1_6 - 89 HTH_28 PF13518.1 52 8.1e-09 27.1 0.6 1 1 8.4e-10 1.1e-08 26.6 0.0 1 40 27 67 27 71 0.92 # 3257 # 3523 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.551 1_17 - 228 HTH_28 PF13518.1 52 4.5e-07 21.5 0.0 1 1 5.9e-08 8.1e-07 20.7 0.0 9 43 163 198 157 202 0.85 # 11146 # 11829 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.335 1_2 - 50 HTH_28 PF13518.1 52 2.4e-06 19.2 0.0 1 1 2.1e-07 2.8e-06 19.0 0.0 14 43 2 31 1 37 0.88 # 1237 # 1386 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_17 - 228 DUF2089 PF09862.4 113 2.3e-05 15.9 0.1 1 1 8.2e-07 3.4e-05 15.3 0.1 32 80 150 197 123 204 0.82 # 11146 # 11829 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.335 1_17 - 228 HTH_24 PF13412.1 48 1.6e-05 16.0 0.1 1 1 1.6e-06 3.3e-05 14.9 0.1 17 39 166 188 165 189 0.93 # 11146 # 11829 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.335 1_10 - 87 HTH_24 PF13412.1 48 0.00029 11.9 0.0 1 1 2.5e-05 0.00051 11.1 0.0 11 39 27 55 26 56 0.92 # 5985 # 6245 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.314 1_17 - 228 HTH_10 PF04967.7 53 7.2e-06 17.3 0.2 1 1 1e-06 2.1e-05 15.7 0.2 23 50 166 193 152 194 0.88 # 11146 # 11829 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.335 1_10 - 87 HTH_10 PF04967.7 53 0.0001 13.6 0.1 1 1 2.2e-05 0.00045 11.5 0.0 27 50 37 60 33 61 0.92 # 5985 # 6245 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.314 1_18 - 518 StbA PF06406.6 318 0.00016 12.3 0.1 1 3 0.038 1.6 -0.8 0.7 169 218 7 57 4 84 0.58 # 11945 # 13498 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.356 1_18 - 518 StbA PF06406.6 318 0.00016 12.3 0.1 2 3 3.8e-06 0.00016 12.3 0.1 158 185 262 289 253 302 0.82 # 11945 # 13498 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.356 1_18 - 518 StbA PF06406.6 318 0.00016 12.3 0.1 3 3 0.0087 0.36 1.3 0.1 245 293 378 425 369 442 0.75 # 11945 # 13498 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.356 2_9 - 191 AAA_25 PF13481.1 194 2.2e-05 15.6 0.6 1 1 8.4e-07 3.4e-05 14.9 0.6 41 72 9 41 3 135 0.85 # 4622 # 5194 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.564 1_1 - 286 Reprolysin_2 PF13574.1 174 1e-08 27.1 0.2 1 1 4.6e-10 1.9e-08 26.2 0.1 5 151 109 240 105 254 0.78 # 1 # 858 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.437 1_18 - 518 Hydant_A_N PF05378.8 176 1.4e-36 117.2 3.7 1 2 1.3e-35 5.3e-34 108.9 0.2 1 175 4 173 4 174 0.86 # 11945 # 13498 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.356 1_18 - 518 Hydant_A_N PF05378.8 176 1.4e-36 117.2 3.7 2 2 8.8e-05 0.0036 8.4 0.4 2 18 271 287 270 306 0.84 # 11945 # 13498 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.356 1_1 - 286 Peptidase_M11 PF05548.6 314 2.9e-06 18.0 1.0 1 1 1.1e-07 4.3e-06 17.4 1.0 130 182 184 239 181 251 0.78 # 1 # 858 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.437 1_6 - 89 HTH_Tnp_ISL3 PF13542.1 52 8.2e-05 13.5 0.2 1 1 9.1e-06 0.00019 12.3 0.1 8 44 19 56 18 56 0.84 # 3257 # 3523 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.551 1_17 - 228 HTH_Tnp_ISL3 PF13542.1 52 0.00011 13.1 0.0 1 1 8.9e-06 0.00018 12.3 0.0 26 48 165 187 162 190 0.88 # 11146 # 11829 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.335 1_6 - 89 CENP-B_N PF04218.8 53 2e-05 15.7 0.1 1 1 7.8e-07 3.2e-05 15.0 0.1 4 42 20 59 18 64 0.86 # 3257 # 3523 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.551 1_1 - 286 Reprolysin_3 PF13582.1 124 4.6e-18 57.6 0.0 1 1 2.1e-19 8.4e-18 56.8 0.0 3 123 111 220 109 221 0.86 # 1 # 858 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.437 4_1 - 48 Mor PF08765.6 108 0.00016 13.2 0.0 1 1 3.8e-06 0.00016 13.2 0.0 29 53 22 46 7 47 0.82 # 240 # 383 # -1 # ID=4_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.319 1_1 - 286 Astacin PF01400.19 191 6.1e-05 14.1 0.1 1 1 2.2e-06 9.1e-05 13.5 0.1 49 96 174 221 137 238 0.78 # 1 # 858 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.437 1_3 - 207 DDE_Tnp_IS240 PF13610.1 140 0.00023 12.8 0.1 1 1 7.5e-06 0.00031 12.4 0.1 53 134 100 182 91 188 0.80 # 1716 # 2336 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 1_17 - 228 HTH_11 PF08279.7 55 7.1e-08 23.7 0.1 1 1 7.4e-09 1.5e-07 22.7 0.1 14 43 165 195 153 201 0.81 # 11146 # 11829 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.335 1_10 - 87 HTH_11 PF08279.7 55 2.7e-05 15.5 0.0 1 1 2.3e-06 4.6e-05 14.7 0.0 6 37 24 55 20 56 0.83 # 5985 # 6245 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.314 3_2 - 277 DDE_Tnp_1_5 PF13737.1 112 4.5e-23 73.3 0.0 1 1 2.5e-24 1e-22 72.1 0.0 45 112 23 90 19 90 0.92 # 1458 # 2288 # -1 # ID=3_2;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.513 1_17 - 228 Sigma70_ECF PF07638.6 185 3.3e-06 18.5 0.0 1 1 2.4e-07 5e-06 17.9 0.0 142 178 155 193 143 198 0.82 # 11146 # 11829 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.335 1_10 - 87 Sigma70_ECF PF07638.6 185 8.5e-06 17.2 0.0 1 1 4.7e-07 9.7e-06 17.0 0.0 138 169 20 51 6 65 0.79 # 5985 # 6245 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.314 1_18 - 518 FtsA PF14450.1 120 0.013 7.0 11.8 1 2 0.00089 0.036 5.6 3.8 3 75 6 105 5 183 0.66 # 11945 # 13498 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.356 1_18 - 518 FtsA PF14450.1 120 0.013 7.0 11.8 2 2 0.001 0.041 5.4 0.7 2 43 271 322 270 361 0.79 # 11945 # 13498 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.356 1_17 - 228 HTH_Mga PF08280.6 59 0.0001 13.7 0.1 1 1 5.4e-06 0.00022 12.7 0.1 13 41 160 188 153 191 0.82 # 11146 # 11829 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.335 2_9 - 191 ArsA_ATPase PF02374.10 305 0.00035 11.2 0.1 1 1 1.2e-05 0.00049 10.8 0.1 8 36 8 36 1 40 0.82 # 4622 # 5194 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.564 2_9 - 191 AAA_31 PF13614.1 157 4.9e-05 15.0 0.1 1 1 2.7e-06 0.00011 13.8 0.0 2 40 2 40 1 52 0.86 # 4622 # 5194 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.564 1_14 - 315 Yae1_N PF09811.4 39 0.00016 12.9 0.6 1 1 1.4e-05 0.00029 12.0 0.6 15 30 269 284 265 292 0.88 # 7867 # 8811 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.504 2_5 - 227 Yae1_N PF09811.4 39 0.00071 10.8 4.7 1 1 0.00011 0.0022 9.3 4.7 5 30 164 189 162 195 0.84 # 3088 # 3768 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.463 2_11 - 174 SSB PF00436.20 104 2.4e-13 41.6 0.0 1 1 8e-15 3.3e-13 41.1 0.0 7 101 17 108 14 111 0.94 # 5688 # 6209 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.573 1_3 - 207 HTH_21 PF13276.1 60 4.4e-06 18.4 2.8 1 2 3.1e-07 1.3e-05 16.9 0.4 38 57 2 21 1 24 0.90 # 1716 # 2336 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 1_3 - 207 HTH_21 PF13276.1 60 4.4e-06 18.4 2.8 2 2 0.02 0.83 1.5 0.1 10 25 177 194 168 203 0.77 # 1716 # 2336 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/6861d733-2719-4c4a-8414-bf29f60b238d # Target file: checkm_output/bins/pm420/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm420/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/6861d733-2719-4c4a-8414-bf29f60b238d checkm_output/bins/pm420/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:05:15 2017 # [ok]