# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_2 - 235 HTH_34 PF13601.1 80 2.3e-07 19.5 0.0 1 1 2.2e-07 1.1e-06 17.4 0.0 13 50 66 103 60 109 0.91 # 1290 # 1994 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.406 1_2 - 235 HTH_27 PF13463.1 68 1.7e-05 13.9 0.0 1 1 5.8e-06 2.9e-05 13.1 0.0 19 57 68 103 61 110 0.79 # 1290 # 1994 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.406 1_2 - 235 HTH_36 PF13730.1 55 2.4e-07 19.6 2.5 1 1 8.8e-08 4.4e-07 18.8 1.0 13 55 60 97 33 97 0.88 # 1290 # 1994 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.406 1_2 - 235 HTH_11 PF08279.7 55 1.3e-05 13.6 0.3 1 1 5.6e-06 2.8e-05 12.5 0.3 17 51 69 104 64 109 0.88 # 1290 # 1994 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.406 1_2 - 235 TrmB PF01978.14 68 3.3e-06 15.5 0.1 1 2 4.1e-06 2.1e-05 13.0 0.1 21 63 66 109 59 111 0.91 # 1290 # 1994 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.406 1_2 - 235 TrmB PF01978.14 68 3.3e-06 15.5 0.1 2 2 0.068 0.34 -0.5 0.0 30 55 178 203 168 221 0.65 # 1290 # 1994 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.406 1_2 - 235 HTH_Crp_2 PF13545.1 76 1.4e-06 16.8 0.0 1 1 5e-07 2.5e-06 16.0 0.0 24 64 63 106 43 108 0.85 # 1290 # 1994 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.406 1_2 - 235 HTH_20 PF12840.2 61 3.8e-06 15.4 0.0 1 1 1.4e-06 6.8e-06 14.6 0.0 24 61 67 104 56 104 0.94 # 1290 # 1994 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.406 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/3408b20c-e214-4ae2-870f-a6ac9f63e6d4 # Target file: checkm_output/bins/pm401/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm401/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/3408b20c-e214-4ae2-870f-a6ac9f63e6d4 checkm_output/bins/pm401/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:04:50 2017 # [ok]