# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_61 - 323 KaiC PF06745.8 227 0.00013 13.4 0.1 1 1 4.3e-06 0.00027 12.3 0.1 12 43 33 63 27 153 0.79 # 52608 # 53576 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_60 - 555 PPK2 PF03976.9 229 0.00025 12.6 0.5 1 2 0.0065 0.41 2.1 0.0 150 181 152 183 145 193 0.83 # 50954 # 52618 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 1_60 - 555 PPK2 PF03976.9 229 0.00025 12.6 0.5 2 2 7.5e-05 0.0048 8.4 0.1 42 122 283 366 274 374 0.84 # 50954 # 52618 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 1_59 - 187 HTH_IclR PF09339.5 52 8.4e-06 17.6 0.0 1 1 7.7e-07 2.4e-05 16.2 0.0 18 40 158 180 144 181 0.92 # 50410 # 50970 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.565 1_62 - 346 HTH_IclR PF09339.5 52 6.6e-05 14.8 2.7 1 2 0.00024 0.0075 8.2 0.0 16 37 38 59 27 68 0.84 # 53765 # 54802 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.519 1_62 - 346 HTH_IclR PF09339.5 52 6.6e-05 14.8 2.7 2 2 0.0023 0.071 5.1 0.5 30 40 127 137 125 138 0.90 # 53765 # 54802 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.519 1_30 - 71 HrcA_DNA-bdg PF03444.10 79 5.5e-05 14.9 0.0 1 1 1e-06 6.3e-05 14.7 0.0 9 60 5 61 1 65 0.75 # 23377 # 23589 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.559 1_61 - 323 ABC_tran PF00005.22 137 4.5e-06 19.3 0.1 1 1 1.4e-07 8.7e-06 18.4 0.1 2 90 31 120 30 159 0.75 # 52608 # 53576 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_59 - 187 HTH_22 PF13309.1 64 8.6e-06 17.8 0.1 1 1 4.5e-06 0.00014 13.9 0.0 45 63 161 179 158 180 0.87 # 50410 # 50970 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.565 1_1 - 296 HTH_22 PF13309.1 64 0.00051 12.1 0.2 1 2 0.0047 0.15 4.2 0.0 24 48 4 28 3 31 0.90 # 2 # 889 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.408 1_1 - 296 HTH_22 PF13309.1 64 0.00051 12.1 0.2 2 2 0.003 0.093 4.8 0.1 1 33 102 134 102 138 0.92 # 2 # 889 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.408 1_48 - 425 Cdd1 PF11731.3 93 0.00021 13.5 0.0 1 1 7.5e-06 0.00047 12.4 0.0 10 47 178 215 141 227 0.84 # 40379 # 41653 # 1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.540 1_56 - 372 AAA_27 PF13514.1 1111 0.089 2.6 60.9 1 2 0.0027 0.17 1.6 40.5 630 830 68 253 47 256 0.78 # 46946 # 48061 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.582 1_56 - 372 AAA_27 PF13514.1 1111 0.089 2.6 60.9 2 2 0.0039 0.25 1.1 30.3 239 400 203 361 190 369 0.71 # 46946 # 48061 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.582 1_60 - 555 rve_3 PF13683.1 67 9.8e-05 14.2 1.6 1 1 5.6e-06 0.00035 12.4 1.6 12 58 282 331 278 339 0.87 # 50954 # 52618 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 1_62 - 346 HTH_38 PF13936.1 44 2.4e-07 22.5 0.8 1 1 5.7e-08 1.8e-06 19.7 0.0 10 41 30 61 26 62 0.89 # 53765 # 54802 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.519 1_59 - 187 HTH_38 PF13936.1 44 5.2e-05 15.1 0.1 1 1 6.3e-06 0.0002 13.2 0.0 13 41 150 179 147 181 0.88 # 50410 # 50970 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.565 1_61 - 323 MobB PF03205.9 140 0.0002 13.3 0.1 1 1 1.1e-05 0.00071 11.6 0.0 2 31 42 70 41 86 0.78 # 52608 # 53576 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_60 - 555 HTH_Tnp_4 PF13613.1 53 0.00021 13.1 0.4 1 1 1.1e-05 0.0007 11.4 0.0 26 44 38 56 35 57 0.90 # 50954 # 52618 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 1_56 - 372 DUF3584 PF12128.3 1201 0.023 4.2 58.8 1 1 0.0012 0.076 2.4 58.5 270 533 77 352 65 366 0.55 # 46946 # 48061 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.582 1_59 - 187 HTH_8 PF02954.14 42 0.00014 13.7 0.1 1 1 5.9e-06 0.00037 12.3 0.1 24 42 164 182 161 182 0.89 # 50410 # 50970 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.565 1_59 - 187 TetR_N PF00440.18 47 0.00028 12.8 0.9 1 2 0.027 1.7 0.7 0.0 11 21 3 13 1 13 0.83 # 50410 # 50970 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.565 1_59 - 187 TetR_N PF00440.18 47 0.00028 12.8 0.9 2 2 3.7e-05 0.0024 9.9 0.2 16 35 158 177 149 178 0.88 # 50410 # 50970 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.565 1_40 - 1410 AAA_19 PF13245.1 76 2.3e-07 22.8 1.4 1 1 2e-08 6.4e-07 21.4 0.2 7 76 980 1046 973 1046 0.76 # 30121 # 34350 # -1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.610 1_61 - 323 AAA_19 PF13245.1 76 4.1e-05 15.6 0.3 1 1 6.6e-06 0.00021 13.3 0.1 6 37 36 67 32 119 0.75 # 52608 # 53576 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_50 - 402 CbiA PF01656.18 195 1.4e-18 59.2 0.0 1 1 4.6e-20 2.9e-18 58.2 0.0 1 141 111 291 111 328 0.75 # 42709 # 43914 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.468 1_61 - 323 PRK PF00485.13 194 0.00022 13.1 0.0 1 1 7.1e-06 0.00045 12.1 0.0 1 38 42 81 42 129 0.65 # 52608 # 53576 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_49 - 325 Sigma70_r4_2 PF08281.7 54 0.00018 13.2 0.0 1 1 8.7e-06 0.00055 11.7 0.0 24 50 158 184 153 185 0.89 # 41735 # 42709 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.449 1_22 - 330 Rep_3 PF01051.16 222 5.3e-33 106.7 0.2 1 1 1.2e-34 7.7e-33 106.1 0.2 3 214 14 269 13 275 0.91 # 14675 # 15664 # 1 # ID=1_22;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.524 1_60 - 555 rve PF00665.21 120 8.9e-13 40.7 0.0 1 1 7.7e-14 2.4e-12 39.3 0.0 2 118 157 298 156 300 0.89 # 50954 # 52618 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 1_62 - 346 rve PF00665.21 120 1.1e-10 34.0 0.0 1 1 8.1e-12 2.6e-10 32.8 0.0 18 118 206 305 190 307 0.91 # 53765 # 54802 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.519 1_62 - 346 Terminase_5 PF06056.7 58 9.7e-05 14.2 0.0 1 1 6.1e-06 0.00038 12.3 0.0 3 35 30 62 28 85 0.86 # 53765 # 54802 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.519 1_40 - 1410 AAA_30 PF13604.1 196 3.9e-45 146.1 13.6 1 2 2.4e-06 7.4e-05 14.6 1.7 8 144 420 548 418 559 0.81 # 30121 # 34350 # -1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.610 1_40 - 1410 AAA_30 PF13604.1 196 3.9e-45 146.1 13.6 2 2 4.2e-44 1.3e-42 137.8 0.7 1 187 967 1156 967 1161 0.93 # 30121 # 34350 # -1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.610 1_61 - 323 AAA_30 PF13604.1 196 0.00011 14.1 0.4 1 1 1.1e-05 0.00034 12.5 0.4 15 128 38 164 27 169 0.55 # 52608 # 53576 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_49 - 325 CPSase_L_D3 PF02787.14 123 6.6e-05 15.0 0.6 1 1 3.2e-06 0.0002 13.4 0.1 49 98 134 186 125 191 0.83 # 41735 # 42709 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.449 1_31 - 112 GerE PF00196.14 58 3.1e-13 41.2 0.0 1 1 7.1e-15 4.5e-13 40.7 0.0 4 54 32 82 30 85 0.96 # 23574 # 23909 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 1_43 - 748 TraG-D_C PF12696.2 128 5.5e-21 67.0 0.0 1 1 4.5e-22 2.8e-20 64.8 0.0 1 127 419 541 419 542 0.87 # 35066 # 37309 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.545 1_62 - 346 DDE_3 PF13358.1 146 1.2e-29 95.2 0.1 1 1 4.1e-31 2.6e-29 94.1 0.0 2 138 177 310 176 317 0.96 # 53765 # 54802 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.519 1_50 - 402 MipZ PF09140.6 261 3.6e-06 18.4 0.0 1 2 0.0025 0.16 3.2 0.0 3 50 111 163 109 201 0.73 # 42709 # 43914 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.468 1_50 - 402 MipZ PF09140.6 261 3.6e-06 18.4 0.0 2 2 2.8e-06 0.00018 12.9 0.0 87 136 233 282 220 305 0.87 # 42709 # 43914 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.468 1_49 - 325 Trp_repressor PF01371.14 88 0.00011 14.4 0.2 1 1 8.3e-06 0.00052 12.2 0.2 15 69 127 180 119 186 0.81 # 41735 # 42709 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.449 1_56 - 372 DUF2316 PF10078.4 89 0.01 8.2 9.4 1 2 0.00018 0.012 8.0 2.7 5 45 198 238 193 249 0.88 # 46946 # 48061 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.582 1_56 - 372 DUF2316 PF10078.4 89 0.01 8.2 9.4 2 2 0.008 0.5 2.7 0.6 5 42 251 288 246 300 0.86 # 46946 # 48061 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.582 1_61 - 323 AAA PF00004.24 132 1e-06 21.3 0.0 1 1 3.7e-08 2.3e-06 20.1 0.0 3 96 45 151 43 180 0.68 # 52608 # 53576 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_49 - 325 HTH_37 PF13744.1 80 3.2e-05 16.0 1.2 1 2 0.0091 0.57 2.4 0.1 27 55 9 37 6 43 0.82 # 41735 # 42709 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.449 1_49 - 325 HTH_37 PF13744.1 80 3.2e-05 16.0 1.2 2 2 1.4e-05 0.00089 11.4 0.1 27 53 156 182 135 186 0.92 # 41735 # 42709 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.449 1_61 - 323 TIGR00064 TIGR00064 279 4.5e-05 14.7 0.2 1 1 1.4e-06 8.8e-05 13.7 0.0 72 111 33 72 4 76 0.73 # 52608 # 53576 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_61 - 323 AAA_16 PF13191.1 185 2.2e-11 36.3 1.2 1 1 1.4e-11 2.9e-10 32.7 0.3 22 179 38 153 24 162 0.76 # 52608 # 53576 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_43 - 748 AAA_16 PF13191.1 185 0.00011 14.4 0.0 1 1 2e-05 0.00041 12.6 0.0 21 55 182 216 179 248 0.85 # 35066 # 37309 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.545 1_40 - 1410 AAA_16 PF13191.1 185 0.00074 11.8 2.8 1 2 0.0027 0.058 5.6 0.0 23 46 983 1006 966 1011 0.82 # 30121 # 34350 # -1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.610 1_40 - 1410 AAA_16 PF13191.1 185 0.00074 11.8 2.8 2 2 0.0053 0.11 4.7 0.1 51 120 1089 1181 1038 1247 0.71 # 30121 # 34350 # -1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.610 1_61 - 323 AAA_22 PF13401.1 131 3.1e-16 52.0 0.3 1 1 1.1e-17 7.1e-16 50.8 0.3 3 129 39 170 36 172 0.77 # 52608 # 53576 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_1 - 296 HTH_1 PF00126.22 60 2.4e-16 51.6 0.0 1 1 1.1e-17 7.2e-16 50.0 0.0 2 60 5 63 4 63 0.96 # 2 # 889 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.408 1_62 - 346 LZ_Tnp_IS481 PF13011.1 85 3e-06 19.8 0.2 1 1 1.1e-07 7e-06 18.6 0.2 12 69 27 82 15 89 0.91 # 53765 # 54802 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.519 1_62 - 346 HTH_32 PF13565.1 77 1.1e-12 41.0 3.6 1 2 0.0027 0.084 6.0 0.1 32 77 24 61 9 61 0.80 # 53765 # 54802 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.519 1_62 - 346 HTH_32 PF13565.1 77 1.1e-12 41.0 3.6 2 2 9.8e-14 3.1e-12 39.5 0.3 1 77 56 136 56 136 0.82 # 53765 # 54802 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.519 1_60 - 555 HTH_32 PF13565.1 77 0.00011 15.3 9.5 1 3 0.0033 0.1 5.7 0.1 33 77 11 52 2 52 0.67 # 50954 # 52618 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 1_60 - 555 HTH_32 PF13565.1 77 0.00011 15.3 9.5 2 3 0.0011 0.035 7.2 0.1 21 63 61 113 54 120 0.69 # 50954 # 52618 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 1_60 - 555 HTH_32 PF13565.1 77 0.00011 15.3 9.5 3 3 0.0055 0.17 5.0 0.1 1 18 131 148 131 160 0.79 # 50954 # 52618 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 1_62 - 346 HTH_23 PF13384.1 50 1.1e-11 36.3 2.8 1 1 2e-12 2.5e-11 35.2 0.0 3 50 26 73 24 73 0.94 # 53765 # 54802 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.519 1_59 - 187 HTH_23 PF13384.1 50 7.8e-06 17.8 0.0 1 1 1.6e-06 2e-05 16.5 0.0 12 42 152 183 148 186 0.81 # 50410 # 50970 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.565 1_49 - 325 HTH_23 PF13384.1 50 0.0002 13.3 0.0 1 1 5.2e-05 0.00066 11.7 0.0 12 40 155 183 151 187 0.82 # 41735 # 42709 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.449 1_31 - 112 HTH_23 PF13384.1 50 0.00053 12.0 0.1 1 1 9.1e-05 0.0011 10.9 0.1 8 35 37 64 36 67 0.95 # 23574 # 23909 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 1_60 - 555 HTH_23 PF13384.1 50 0.0022 10.0 0.1 1 2 0.00018 0.0022 10.0 0.1 20 39 34 53 29 57 0.88 # 50954 # 52618 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 1_60 - 555 HTH_23 PF13384.1 50 0.0022 10.0 0.1 2 2 0.0029 0.036 6.1 0.5 32 42 130 140 128 147 0.84 # 50954 # 52618 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 1_59 - 187 HTH_7 PF02796.10 45 4.7e-10 31.5 0.1 1 1 4.8e-11 1e-09 30.4 0.1 1 42 140 179 140 181 0.93 # 50410 # 50970 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.565 1_60 - 555 HTH_7 PF02796.10 45 1.7e-05 16.9 0.2 1 1 3e-06 6.4e-05 15.1 0.2 23 43 33 53 30 54 0.93 # 50954 # 52618 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 1_62 - 346 HTH_7 PF02796.10 45 0.00026 13.2 0.2 1 2 0.00021 0.0043 9.2 0.0 15 38 34 57 16 61 0.84 # 53765 # 54802 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.519 1_62 - 346 HTH_7 PF02796.10 45 0.00026 13.2 0.2 2 2 0.066 1.4 1.2 0.1 35 43 129 137 119 139 0.79 # 53765 # 54802 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.519 1_61 - 323 NB-ARC PF00931.17 287 0.00025 12.2 0.3 1 1 5.9e-06 0.00037 11.6 0.3 8 104 29 126 22 144 0.74 # 52608 # 53576 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_62 - 346 HTH_29 PF13551.1 112 1.7e-19 62.3 0.2 1 1 2e-20 4.2e-19 61.0 0.2 1 111 30 139 30 140 0.92 # 53765 # 54802 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.519 1_60 - 555 HTH_29 PF13551.1 112 3.7e-06 19.4 0.5 1 2 3.4e-05 0.00072 12.0 0.1 14 91 33 109 25 121 0.65 # 50954 # 52618 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 1_60 - 555 HTH_29 PF13551.1 112 3.7e-06 19.4 0.5 2 2 0.011 0.23 3.9 0.0 25 44 128 147 125 155 0.80 # 50954 # 52618 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 1_59 - 187 HTH_29 PF13551.1 112 8.7e-06 18.2 1.2 1 2 0.067 1.4 1.4 0.1 32 62 120 149 104 156 0.71 # 50410 # 50970 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.565 1_59 - 187 HTH_29 PF13551.1 112 8.7e-06 18.2 1.2 2 2 5.5e-06 0.00012 14.5 0.0 10 38 157 184 152 185 0.90 # 50410 # 50970 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.565 1_61 - 323 Arch_ATPase PF01637.13 234 2.3e-05 16.4 0.2 1 1 8.6e-07 5.4e-05 15.2 0.2 8 135 30 142 27 164 0.68 # 52608 # 53576 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_61 - 323 AAA_5 PF07728.9 139 5.2e-05 15.3 0.2 1 1 7e-06 0.00044 12.2 0.2 5 90 46 149 43 152 0.85 # 52608 # 53576 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_61 - 323 ResIII PF04851.10 184 6.3e-06 18.4 0.2 1 2 2e-05 0.0013 10.8 0.3 29 100 44 109 20 117 0.72 # 52608 # 53576 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_61 - 323 ResIII PF04851.10 184 6.3e-06 18.4 0.2 2 2 0.00043 0.027 6.5 0.0 129 162 107 140 84 153 0.64 # 52608 # 53576 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_43 - 748 TrwB_AAD_bind PF10412.4 386 1.3e-145 477.0 0.0 1 1 5.1e-147 1.6e-145 476.7 0.0 2 386 172 561 171 561 0.99 # 35066 # 37309 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.545 1_61 - 323 TrwB_AAD_bind PF10412.4 386 8.9e-05 13.4 0.5 1 3 3.3e-05 0.001 9.9 0.0 14 44 39 69 35 76 0.83 # 52608 # 53576 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_61 - 323 TrwB_AAD_bind PF10412.4 386 8.9e-05 13.4 0.5 2 3 0.042 1.3 -0.3 0.0 234 275 115 158 112 169 0.78 # 52608 # 53576 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_61 - 323 TrwB_AAD_bind PF10412.4 386 8.9e-05 13.4 0.5 3 3 0.073 2.3 -1.1 0.0 128 182 251 306 240 311 0.71 # 52608 # 53576 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_61 - 323 AAA_18 PF13238.1 129 5.8e-05 15.7 0.0 1 1 1.7e-06 0.0001 14.9 0.0 1 23 43 90 43 139 0.67 # 52608 # 53576 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_48 - 425 IMS_HHH PF11798.3 32 2.2e-08 26.2 0.1 1 1 7.8e-10 4.9e-08 25.0 0.1 5 32 174 201 169 201 0.89 # 40379 # 41653 # 1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.540 1_55 - 170 TIGR01406 TIGR01406 231 0.00021 12.9 0.0 1 1 5e-06 0.00032 12.3 0.0 3 59 106 156 105 159 0.81 # 46444 # 46953 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.590 1_61 - 323 DUF87 PF01935.12 229 0.00038 12.6 0.2 1 3 5.2e-05 0.0033 9.5 0.0 26 52 43 69 40 73 0.85 # 52608 # 53576 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_61 - 323 DUF87 PF01935.12 229 0.00038 12.6 0.2 2 3 0.083 5.2 -1.0 0.0 135 194 79 139 68 151 0.68 # 52608 # 53576 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_61 - 323 DUF87 PF01935.12 229 0.00038 12.6 0.2 3 3 0.071 4.5 -0.8 0.0 125 195 202 299 177 308 0.57 # 52608 # 53576 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_62 - 346 HTH_28 PF13518.1 52 6.2e-10 31.3 0.1 1 1 2.1e-10 4.5e-09 28.5 0.0 1 50 29 79 29 82 0.91 # 53765 # 54802 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.519 1_59 - 187 HTH_28 PF13518.1 52 1.1e-06 20.9 1.1 1 1 7.1e-08 1.5e-06 20.4 0.1 4 38 149 184 148 185 0.92 # 50410 # 50970 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.565 1_60 - 555 HTH_28 PF13518.1 52 0.0011 11.2 0.0 1 2 5.4e-05 0.0011 11.2 0.0 15 35 34 54 32 64 0.90 # 50954 # 52618 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 1_60 - 555 HTH_28 PF13518.1 52 0.0011 11.2 0.0 2 2 0.037 0.78 2.2 0.4 26 37 129 140 125 145 0.87 # 50954 # 52618 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 1_61 - 323 TIGR00041 TIGR00041 196 0.00021 13.0 0.0 1 1 5.7e-06 0.00036 12.2 0.0 2 54 38 96 37 122 0.74 # 52608 # 53576 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_49 - 325 HTH_24 PF13412.1 48 6.4e-05 14.6 0.4 1 1 9.8e-06 0.00031 12.4 0.0 13 39 157 182 153 184 0.84 # 41735 # 42709 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.449 1_30 - 71 HTH_24 PF13412.1 48 0.00013 13.6 0.1 1 1 5.9e-06 0.00018 13.1 0.1 7 43 8 50 3 52 0.79 # 23377 # 23589 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.559 1_30 - 71 DUF2250 PF10007.4 93 0.00023 13.4 0.0 1 1 3.8e-06 0.00024 13.3 0.0 25 57 27 59 8 63 0.88 # 23377 # 23589 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.559 1_62 - 346 HTH_33 PF13592.1 60 3.7e-10 31.5 0.3 1 1 2.4e-11 1.5e-09 29.6 0.3 3 50 108 155 107 157 0.94 # 53765 # 54802 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.519 1_61 - 323 DUF2075 PF09848.4 352 1.1e-06 20.0 0.1 1 1 2.6e-08 1.6e-06 19.5 0.1 2 97 41 138 40 165 0.71 # 52608 # 53576 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_9 - 117 HTH_OrfB_IS605 PF12323.3 46 5.2e-19 59.7 0.0 1 1 1.3e-20 8.2e-19 59.0 0.0 1 45 1 45 1 46 0.98 # 6645 # 6995 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 1_61 - 323 T2SE PF00437.15 272 1.7e-06 19.3 0.7 1 1 1.3e-07 8.3e-06 17.1 0.7 110 161 22 72 6 137 0.81 # 52608 # 53576 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_61 - 323 NACHT PF05729.7 166 0.0003 12.7 0.2 1 1 1.2e-05 0.00073 11.5 0.2 1 28 41 68 41 141 0.77 # 52608 # 53576 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_61 - 323 UPF0079 PF02367.12 123 7.3e-05 14.7 0.0 1 1 2.2e-06 0.00014 13.8 0.0 3 45 28 70 26 114 0.84 # 52608 # 53576 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_61 - 323 AAA_17 PF13207.1 121 8.1e-05 15.7 0.1 1 1 3e-06 0.00019 14.6 0.1 1 40 42 89 42 200 0.62 # 52608 # 53576 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_61 - 323 TIGR02211 TIGR02211 221 0.00029 12.3 0.0 1 1 7.3e-06 0.00046 11.7 0.0 11 51 20 60 12 86 0.88 # 52608 # 53576 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_61 - 323 AAA_14 PF13173.1 128 2.7e-06 19.6 0.0 1 1 1.8e-07 1.1e-05 17.6 0.0 2 96 40 164 39 191 0.62 # 52608 # 53576 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_62 - 346 HTH_Tnp_ISL3 PF13542.1 52 0.00015 13.2 0.4 1 1 2.3e-05 0.00072 11.0 0.4 18 49 30 62 26 62 0.79 # 53765 # 54802 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.519 1_60 - 555 HTH_Tnp_ISL3 PF13542.1 52 0.00023 12.6 0.0 1 1 2.7e-05 0.00084 10.8 0.0 30 49 34 53 32 55 0.90 # 50954 # 52618 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 1_61 - 323 AAA_33 PF13671.1 143 0.0001 14.5 0.0 1 1 3.7e-06 0.00023 13.3 0.0 1 45 42 100 42 132 0.60 # 52608 # 53576 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_43 - 748 T4SS-DNA_transf PF02534.9 469 3.4e-12 37.8 0.0 1 1 7.6e-14 4.8e-12 37.3 0.0 270 392 388 506 262 543 0.85 # 35066 # 37309 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.545 1_30 - 71 HTH_15 PF12324.3 77 3.7e-05 15.6 0.0 1 2 6e-06 0.00038 12.4 0.0 34 65 20 51 16 53 0.91 # 23377 # 23589 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.559 1_30 - 71 HTH_15 PF12324.3 77 3.7e-05 15.6 0.0 2 2 0.017 1.1 1.3 0.0 13 28 54 69 52 70 0.88 # 23377 # 23589 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.559 1_56 - 372 TIGR00422 TIGR00422 863 0.062 3.1 16.9 1 1 0.0012 0.075 2.8 16.1 720 856 134 270 78 276 0.83 # 46946 # 48061 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.582 1_37 - 195 Glyco_trans_1_3 PF13528.1 318 5.1e-05 14.8 0.0 1 1 1.2e-06 7.7e-05 14.2 0.0 144 213 19 89 3 96 0.72 # 27790 # 28374 # -1 # ID=1_37;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.585 1_62 - 346 HTH_17 PF12728.2 51 8.3e-05 15.1 0.3 1 2 4.3e-05 0.0027 10.3 0.0 2 45 41 90 40 92 0.87 # 53765 # 54802 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.519 1_62 - 346 HTH_17 PF12728.2 51 8.3e-05 15.1 0.3 2 2 0.034 2.1 1.0 0.0 13 25 127 139 122 147 0.86 # 53765 # 54802 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.519 1_23 - 129 BOF PF04076.8 103 4.1e-44 140.9 0.7 1 1 7.9e-46 5e-44 140.7 0.7 2 102 25 125 24 126 0.98 # 15996 # 16382 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.457 1_61 - 323 PIF1 PF05970.9 364 1.8e-05 16.0 0.0 1 1 6.3e-07 4e-05 14.9 0.0 7 127 27 149 23 167 0.68 # 52608 # 53576 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_59 - 187 TrmB PF01978.14 68 5.7e-05 15.1 0.0 1 1 3.6e-06 0.00011 14.1 0.0 21 45 157 181 148 184 0.88 # 50410 # 50970 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.565 1_30 - 71 TrmB PF01978.14 68 0.00037 12.5 0.0 1 1 1.5e-05 0.00047 12.2 0.0 22 55 24 57 22 67 0.90 # 23377 # 23589 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.559 1_49 - 325 HTH_Crp_2 PF13545.1 76 0.00032 12.8 0.6 1 1 2.8e-05 0.0018 10.4 0.0 28 51 160 183 146 186 0.90 # 41735 # 42709 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.449 1_55 - 170 RNase_T PF00929.19 164 2.8e-07 23.2 0.0 1 1 6.3e-09 4e-07 22.7 0.0 1 55 106 152 106 158 0.89 # 46444 # 46953 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.590 1_43 - 748 AAA_10 PF12846.2 304 5.2e-07 21.6 0.0 1 1 6.6e-07 2.1e-05 16.3 0.0 3 295 187 493 186 498 0.54 # 35066 # 37309 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.545 1_61 - 323 AAA_10 PF12846.2 304 6.1e-07 21.3 0.1 1 1 3.6e-06 0.00011 13.9 0.1 3 37 42 80 40 315 0.83 # 52608 # 53576 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_22 - 330 HTH_20 PF12840.2 61 0.00021 13.4 0.0 1 2 0.0028 0.18 4.0 0.0 24 46 106 128 101 129 0.89 # 14675 # 15664 # 1 # ID=1_22;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.524 1_22 - 330 HTH_20 PF12840.2 61 0.00021 13.4 0.0 2 2 0.00037 0.024 6.8 0.0 19 58 217 263 190 266 0.79 # 14675 # 15664 # 1 # ID=1_22;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.524 1_56 - 372 AAA_13 PF13166.1 712 0.029 4.9 35.4 1 1 0.022 1.4 -0.6 35.3 274 453 75 260 41 364 0.69 # 46946 # 48061 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.582 1_50 - 402 AAA_31 PF13614.1 157 0.00028 13.1 0.1 1 2 0.071 4.5 -0.6 0.0 12 61 120 174 110 209 0.55 # 42709 # 43914 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.468 1_50 - 402 AAA_31 PF13614.1 157 0.00028 13.1 0.1 2 2 3.1e-05 0.002 10.3 0.0 108 147 235 273 231 279 0.86 # 42709 # 43914 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.468 1_30 - 71 FaeA PF04703.7 62 4.3e-31 99.2 0.0 1 1 7.5e-33 4.7e-31 99.1 0.0 1 61 1 70 1 70 0.99 # 23377 # 23589 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.559 1_48 - 425 DNA_pol_lambd_f PF10391.4 52 0.00021 13.1 0.0 1 1 1e-05 0.00065 11.5 0.0 5 29 183 207 179 218 0.85 # 40379 # 41653 # 1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.540 1_40 - 1410 AAA_11 PF13086.1 236 9.1e-05 14.3 0.0 1 1 6.1e-06 0.00039 12.3 0.0 2 75 968 1038 967 1058 0.79 # 30121 # 34350 # -1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.610 1_52 - 314 Glyco_trans_4_3 PF12000.3 171 8.5e-06 17.7 0.1 1 2 0.00077 0.048 5.5 0.0 14 84 112 182 97 188 0.79 # 44329 # 45270 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.538 1_52 - 314 Glyco_trans_4_3 PF12000.3 171 8.5e-06 17.7 0.1 2 2 3.4e-05 0.0021 9.9 0.0 19 65 209 256 201 261 0.90 # 44329 # 45270 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.538 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/b014b8aa-db87-490a-bfb6-b06b9347c04f # Target file: checkm_output/bins/pm400/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm400/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/b014b8aa-db87-490a-bfb6-b06b9347c04f checkm_output/bins/pm400/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:04:53 2017 # [ok]