# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_61 - 189 Hexokinase_1 PF00349.16 206 0.00043 13.2 0.0 1 1 3.9e-06 0.00063 12.7 0.0 126 160 43 77 26 110 0.81 # 44328 # 44894 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.490 1_40 - 227 Cons_hypoth95 PF03602.10 183 0.00014 14.9 0.0 1 2 0.00051 0.08 5.8 0.0 113 128 19 34 11 81 0.67 # 30510 # 31190 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 1_40 - 227 Cons_hypoth95 PF03602.10 183 0.00014 14.9 0.0 2 2 0.00021 0.033 7.1 0.0 41 61 162 182 144 213 0.83 # 30510 # 31190 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 1_23 - 323 KaiC PF06745.8 227 0.00031 13.4 0.1 1 1 4.3e-06 0.00069 12.3 0.1 12 43 33 63 27 149 0.80 # 15179 # 16147 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 4_2 - 186 HTH_IclR PF09339.5 52 2e-05 17.7 0.2 1 1 1.4e-06 7.3e-05 15.9 0.0 15 40 155 180 151 181 0.85 # 3231 # 3788 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 1_25 - 187 HTH_IclR PF09339.5 52 2.3e-05 17.5 0.0 1 1 1.2e-06 6.3e-05 16.1 0.0 18 40 158 180 145 181 0.93 # 17785 # 18345 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.561 1_22 - 346 HTH_IclR PF09339.5 52 0.00017 14.8 2.7 1 2 0.00036 0.019 8.2 0.0 16 37 38 59 27 68 0.84 # 13953 # 14990 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_22 - 346 HTH_IclR PF09339.5 52 0.00017 14.8 2.7 2 2 0.0034 0.18 5.1 0.5 30 40 127 137 125 138 0.90 # 13953 # 14990 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_23 - 323 ABC_tran PF00005.22 137 1.1e-05 19.3 0.1 1 1 2.7e-07 2.2e-05 18.4 0.1 2 90 31 120 30 159 0.75 # 15179 # 16147 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 3_11 - 522 ABC_tran PF00005.22 137 0.00025 14.9 0.0 1 1 9.4e-06 0.00075 13.4 0.0 14 113 27 155 17 158 0.73 # 8784 # 10349 # 1 # ID=3_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 2_21 - 187 HTH_22 PF13309.1 64 9e-06 19.0 0.3 1 2 0.089 3.6 1.1 0.0 23 38 70 85 58 87 0.81 # 15294 # 15854 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 2_21 - 187 HTH_22 PF13309.1 64 9e-06 19.0 0.3 2 2 5.4e-06 0.00021 14.6 0.0 47 64 166 183 164 183 0.93 # 15294 # 15854 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 1_25 - 187 HTH_22 PF13309.1 64 2.2e-05 17.7 0.1 1 1 9.1e-06 0.00036 13.9 0.0 45 63 161 179 158 180 0.87 # 17785 # 18345 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.561 4_2 - 186 HTH_22 PF13309.1 64 0.00045 13.6 1.5 1 1 4.7e-05 0.0019 11.6 0.1 35 63 156 179 143 180 0.76 # 3231 # 3788 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 5_6 - 119 HTH_22 PF13309.1 64 0.001 12.4 0.0 1 1 8.2e-05 0.0032 10.8 0.0 28 64 8 39 1 39 0.80 # 4396 # 4752 # 1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 1_40 - 227 TIGR00095 TIGR00095 194 0.0015 11.4 0.0 1 2 0.0018 0.29 4.0 0.0 124 137 20 33 13 77 0.83 # 30510 # 31190 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 1_40 - 227 TIGR00095 TIGR00095 194 0.0015 11.4 0.0 2 2 0.00063 0.1 5.5 0.0 52 72 163 183 152 216 0.78 # 30510 # 31190 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 1_65 - 79 DUF463 PF04317.7 443 7.2e-05 15.0 0.0 1 1 5e-07 8e-05 14.8 0.0 3 30 47 74 45 78 0.89 # 47615 # 47851 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.388 2_14 - 262 DUF815 PF05673.8 250 0.00035 13.1 0.0 1 1 3.6e-06 0.00058 12.4 0.0 23 76 65 122 46 139 0.79 # 9730 # 10515 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_36 - 425 Cdd1 PF11731.3 93 0.00056 13.4 0.0 1 1 8.1e-06 0.0013 12.3 0.0 10 47 178 215 141 227 0.85 # 27102 # 28376 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 1_24 - 555 rve_3 PF13683.1 67 0.00042 13.4 1.5 1 1 9.6e-06 0.0015 11.6 1.5 12 58 282 331 278 339 0.84 # 16137 # 17801 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.555 5_6 - 119 HTH_DeoR PF08220.7 57 0.00079 12.6 0.0 1 1 7.8e-06 0.0012 11.9 0.0 5 36 9 39 7 50 0.80 # 4396 # 4752 # 1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 1_71 - 883 FtsK_SpoIIIE PF01580.13 205 4.6e-05 16.5 0.1 1 2 4.2e-06 0.00033 13.7 0.0 39 63 476 504 464 507 0.84 # 49575 # 52223 # 1 # ID=1_71;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.570 1_71 - 883 FtsK_SpoIIIE PF01580.13 205 4.6e-05 16.5 0.1 2 2 0.07 5.6 -0.1 0.0 76 166 531 625 529 632 0.78 # 49575 # 52223 # 1 # ID=1_71;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.570 1_65 - 79 FtsK_SpoIIIE PF01580.13 205 0.0014 11.6 0.0 1 1 2.1e-05 0.0017 11.4 0.0 26 65 31 71 21 74 0.82 # 47615 # 47851 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.388 4_2 - 186 HTH_40 PF14493.1 91 0.001 12.8 0.6 1 1 2.1e-05 0.0034 11.2 0.1 7 32 152 177 147 183 0.89 # 3231 # 3788 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 5_6 - 119 HTH_38 PF13936.1 44 4.1e-08 26.3 0.1 1 1 2.5e-09 9.8e-08 25.1 0.1 5 42 2 39 2 39 0.94 # 4396 # 4752 # 1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 1_22 - 346 HTH_38 PF13936.1 44 6.1e-07 22.5 0.8 1 1 1.1e-07 4.5e-06 19.7 0.0 10 41 30 61 26 62 0.89 # 13953 # 14990 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 4_2 - 186 HTH_38 PF13936.1 44 4.9e-06 19.6 1.4 1 1 2.4e-07 9.4e-06 18.7 0.0 9 41 147 179 145 182 0.93 # 3231 # 3788 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 1_25 - 187 HTH_38 PF13936.1 44 0.00021 14.4 0.1 1 1 1.9e-05 0.00077 12.6 0.1 15 41 152 179 148 181 0.88 # 17785 # 18345 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.561 1_23 - 323 MobB PF03205.9 140 0.00051 13.3 0.1 1 1 3.4e-05 0.0018 11.6 0.0 2 31 42 70 41 86 0.78 # 15179 # 16147 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_65 - 79 MobB PF03205.9 140 0.00076 12.8 0.1 1 1 2e-05 0.0011 12.3 0.1 4 32 48 76 46 78 0.90 # 47615 # 47851 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.388 1_71 - 883 MobB PF03205.9 140 0.0013 12.0 0.1 1 1 8.1e-05 0.0043 10.3 0.0 4 37 483 515 481 523 0.79 # 49575 # 52223 # 1 # ID=1_71;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.570 3_12 - 341 UvrD-helicase PF00580.16 315 1.6e-08 27.7 0.1 1 2 5.9e-06 0.00094 12.0 0.1 16 69 4 49 2 78 0.83 # 10334 # 11356 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 3_12 - 341 UvrD-helicase PF00580.16 315 1.6e-08 27.7 0.1 2 2 2.6e-06 0.00041 13.2 0.0 242 294 115 170 96 174 0.86 # 10334 # 11356 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_24 - 555 HTH_Tnp_4 PF13613.1 53 0.00052 13.1 0.4 1 1 1.1e-05 0.0018 11.4 0.0 26 44 38 56 35 57 0.90 # 16137 # 17801 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.555 2_21 - 187 HTH_8 PF02954.14 42 0.00016 14.7 0.2 1 2 0.047 3.7 0.8 0.1 2 12 114 124 113 124 0.85 # 15294 # 15854 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 2_21 - 187 HTH_8 PF02954.14 42 0.00016 14.7 0.2 2 2 3.2e-05 0.0025 10.9 0.0 20 37 163 180 159 183 0.86 # 15294 # 15854 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 1_25 - 187 HTH_8 PF02954.14 42 0.00035 13.7 0.1 1 1 1.2e-05 0.00093 12.3 0.1 24 42 164 182 161 182 0.89 # 17785 # 18345 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.561 2_10 - 226 TetR_N PF00440.18 47 5.7e-20 64.3 0.1 1 2 1.4e-20 1.1e-18 60.2 0.0 2 47 19 64 18 64 0.97 # 6298 # 6975 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 2_10 - 226 TetR_N PF00440.18 47 5.7e-20 64.3 0.1 2 2 0.025 2 1.8 0.1 1 16 179 194 179 196 0.91 # 6298 # 6975 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_25 - 187 TetR_N PF00440.18 47 0.00066 12.9 0.7 1 2 0.054 4.3 0.7 0.0 11 21 3 13 1 13 0.83 # 17785 # 18345 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.561 1_25 - 187 TetR_N PF00440.18 47 0.00066 12.9 0.7 2 2 8.4e-05 0.0066 9.7 0.2 17 35 159 177 156 178 0.86 # 17785 # 18345 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.561 1_90 - 1753 AAA_19 PF13245.1 76 1.9e-07 24.4 0.4 1 1 1.8e-08 7.2e-07 22.5 0.4 7 76 980 1046 973 1046 0.78 # 68183 # 73441 # 1 # ID=1_90;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.614 2_14 - 262 AAA_19 PF13245.1 76 5.9e-07 22.8 0.0 1 1 3.9e-08 1.5e-06 21.4 0.0 11 37 101 126 95 147 0.81 # 9730 # 10515 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_65 - 79 AAA_19 PF13245.1 76 1.9e-05 18.0 0.0 1 1 6.4e-07 2.5e-05 17.5 0.0 14 42 48 75 41 78 0.80 # 47615 # 47851 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.388 1_23 - 323 AAA_19 PF13245.1 76 0.0001 15.6 0.2 1 1 1.3e-05 0.00052 13.3 0.1 6 37 36 67 32 119 0.75 # 15179 # 16147 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_34 - 402 CbiA PF01656.18 195 3.6e-18 59.2 0.0 1 1 4.6e-20 7.3e-18 58.2 0.0 1 141 111 291 111 328 0.75 # 24841 # 26046 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.468 1_23 - 323 PRK PF00485.13 194 0.00054 13.1 0.0 1 1 7e-06 0.0011 12.1 0.0 1 38 42 81 42 132 0.66 # 15179 # 16147 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_14 - 262 KTI12 PF08433.5 270 0.00028 13.7 0.4 1 2 0.00013 0.01 8.6 0.0 4 81 102 172 101 174 0.68 # 9730 # 10515 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 2_14 - 262 KTI12 PF08433.5 270 0.00028 13.7 0.4 2 2 0.0073 0.58 2.8 0.1 34 59 232 257 212 261 0.77 # 9730 # 10515 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_65 - 79 KTI12 PF08433.5 270 0.00084 12.1 0.2 1 1 1.9e-05 0.0015 11.3 0.1 6 30 49 73 47 77 0.86 # 47615 # 47851 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.388 1_40 - 227 MethyltransfD12 PF02086.10 260 0.00088 12.3 0.0 1 2 0.02 3.3 0.6 0.0 177 188 20 31 11 86 0.88 # 30510 # 31190 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 1_40 - 227 MethyltransfD12 PF02086.10 260 0.00088 12.3 0.0 2 2 3.9e-05 0.0062 9.5 0.0 15 46 156 189 148 214 0.82 # 30510 # 31190 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 5_6 - 119 Sigma70_r4_2 PF08281.7 54 6e-05 16.1 0.0 1 1 1.9e-06 9.9e-05 15.4 0.0 31 47 22 38 9 39 0.92 # 4396 # 4752 # 1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 1_57 - 229 Sigma70_r4_2 PF08281.7 54 0.00017 14.6 0.0 1 1 4.9e-06 0.00026 14.0 0.0 10 47 151 187 149 194 0.80 # 42569 # 43255 # 1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.349 1_35 - 325 Sigma70_r4_2 PF08281.7 54 0.00085 12.4 0.0 1 1 4.8e-05 0.0026 10.8 0.0 24 50 158 184 153 185 0.89 # 26046 # 27020 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.447 5_5 - 326 Rep_3 PF01051.16 222 2.5e-33 109.0 0.1 1 1 2.2e-35 3.4e-33 108.6 0.1 3 214 10 265 8 271 0.90 # 2673 # 3650 # -1 # ID=5_5;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.522 2_13 - 390 rve PF00665.21 120 1.6e-15 50.9 0.2 1 1 7.7e-17 3.1e-15 49.9 0.2 4 119 12 138 10 139 0.95 # 8574 # 9743 # 1 # ID=2_13;partial=00;start_type=TTG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.544 1_24 - 555 rve PF00665.21 120 2.3e-12 40.7 0.0 1 1 1.5e-13 6.1e-12 39.3 0.0 2 118 157 298 156 300 0.89 # 16137 # 17801 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.555 1_22 - 346 rve PF00665.21 120 2.7e-10 34.0 0.0 1 1 1.6e-11 6.5e-10 32.8 0.0 18 118 206 305 190 307 0.91 # 13953 # 14990 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_7 - 236 rve PF00665.21 120 2.1e-08 27.9 0.0 1 1 1.2e-09 4.6e-08 26.8 0.0 2 47 173 225 172 233 0.86 # 3436 # 4143 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.647 2_14 - 262 MCM PF00493.18 331 0.00032 13.1 0.0 1 2 7.5e-06 0.0012 11.2 0.0 56 120 98 162 82 172 0.81 # 9730 # 10515 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 2_14 - 262 MCM PF00493.18 331 0.00032 13.1 0.0 2 2 0.034 5.4 -0.8 0.0 161 211 190 237 186 259 0.71 # 9730 # 10515 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_22 - 346 Terminase_5 PF06056.7 58 0.00024 14.2 0.0 1 1 6.1e-06 0.00097 12.3 0.0 3 35 30 62 28 85 0.86 # 13953 # 14990 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 3_11 - 522 AAA_23 PF13476.1 202 5.3e-12 40.0 0.0 1 1 1.6e-13 2.6e-11 37.8 0.0 1 53 6 58 6 115 0.85 # 8784 # 10349 # 1 # ID=3_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 1_40 - 227 Methyltransf_26 PF13659.1 117 1.7e-10 34.5 0.0 1 2 1.4e-07 2.2e-05 18.0 0.0 60 114 10 71 3 74 0.69 # 30510 # 31190 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 1_40 - 227 Methyltransf_26 PF13659.1 117 1.7e-10 34.5 0.0 2 2 1.8e-06 0.00029 14.4 0.0 4 34 167 196 164 221 0.80 # 30510 # 31190 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 1_65 - 79 Zeta_toxin PF06414.7 201 0.0012 11.5 0.0 1 1 8.3e-06 0.0013 11.4 0.0 21 41 49 69 31 75 0.83 # 47615 # 47851 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.388 1_90 - 1753 AAA_30 PF13604.1 196 3.7e-44 144.2 14.8 1 3 0.076 3 0.9 0.0 41 86 223 269 218 282 0.84 # 68183 # 73441 # 1 # ID=1_90;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.614 1_90 - 1753 AAA_30 PF13604.1 196 3.7e-44 144.2 14.8 2 3 0.00049 0.019 8.0 2.2 8 147 420 551 418 564 0.80 # 68183 # 73441 # 1 # ID=1_90;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.614 1_90 - 1753 AAA_30 PF13604.1 196 3.7e-44 144.2 14.8 3 3 3.9e-44 1.5e-42 138.9 1.1 1 191 967 1160 967 1163 0.93 # 68183 # 73441 # 1 # ID=1_90;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.614 1_23 - 323 AAA_30 PF13604.1 196 0.00026 14.2 0.3 1 1 1.9e-05 0.00077 12.6 0.3 15 128 38 164 27 170 0.55 # 15179 # 16147 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_14 - 262 AAA_30 PF13604.1 196 0.00074 12.7 0.2 1 1 5.6e-05 0.0022 11.1 0.1 16 49 97 131 87 162 0.73 # 9730 # 10515 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_65 - 79 AAA_30 PF13604.1 196 0.0018 11.4 0.0 1 1 5.7e-05 0.0023 11.1 0.0 22 45 48 72 38 76 0.74 # 47615 # 47851 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.388 1_35 - 325 CPSase_L_D3 PF02787.14 123 0.00031 14.1 0.5 1 1 6e-06 0.00095 12.5 0.1 49 98 134 186 125 191 0.83 # 26046 # 27020 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.447 3_11 - 522 SMC_N PF02463.14 220 3.9e-11 36.1 0.0 1 2 1.4e-11 2.2e-09 30.4 0.0 2 69 4 67 3 79 0.85 # 8784 # 10349 # 1 # ID=3_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 3_11 - 522 SMC_N PF02463.14 220 3.9e-11 36.1 0.0 2 2 0.0024 0.38 3.5 0.0 163 204 281 321 253 330 0.85 # 8784 # 10349 # 1 # ID=3_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 2_21 - 187 HTH_Tnp_1 PF01527.15 76 0.00031 14.3 0.1 1 1 4.4e-06 0.00071 13.1 0.1 15 44 154 182 140 186 0.79 # 15294 # 15854 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 5_6 - 119 GerE PF00196.14 58 0.00016 14.6 0.0 1 1 1.8e-06 0.00028 13.8 0.0 17 40 16 39 9 40 0.83 # 4396 # 4752 # 1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 1_87 - 721 TraG-D_C PF12696.2 128 1.3e-20 67.1 0.0 1 2 0.095 15 -1.0 0.0 12 60 196 243 192 247 0.85 # 65305 # 67467 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.539 1_87 - 721 TraG-D_C PF12696.2 128 1.3e-20 67.1 0.0 2 2 4.2e-22 6.7e-20 64.8 0.0 1 127 419 541 419 542 0.87 # 65305 # 67467 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.539 1_22 - 346 DDE_3 PF13358.1 146 3.1e-29 95.2 0.1 1 1 4.1e-31 6.6e-29 94.1 0.0 2 138 177 310 176 317 0.96 # 13953 # 14990 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_14 - 262 Bac_DnaA PF00308.13 219 2e-10 34.2 0.0 1 1 2.1e-12 3.3e-10 33.5 0.0 36 136 101 199 80 221 0.87 # 9730 # 10515 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_34 - 402 MipZ PF09140.6 261 9e-06 18.4 0.0 1 2 0.0025 0.4 3.2 0.0 3 50 111 163 109 201 0.73 # 24841 # 26046 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.468 1_34 - 402 MipZ PF09140.6 261 9e-06 18.4 0.0 2 2 2.8e-06 0.00044 12.9 0.0 87 136 233 282 220 305 0.87 # 24841 # 26046 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.468 1_40 - 227 UPF0020 PF01170.13 180 0.00091 12.4 0.0 1 2 0.00016 0.026 7.6 0.0 103 119 17 33 6 85 0.76 # 30510 # 31190 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 1_40 - 227 UPF0020 PF01170.13 180 0.00091 12.4 0.0 2 2 0.0053 0.84 2.7 0.0 29 53 164 187 159 217 0.69 # 30510 # 31190 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 1_63 - 474 DivIC PF04977.10 80 0.004 10.3 6.6 1 2 1.7e-05 0.0026 10.8 3.5 17 66 75 123 71 124 0.91 # 45621 # 47042 # 1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.579 1_63 - 474 DivIC PF04977.10 80 0.004 10.3 6.6 2 2 0.055 8.7 -0.5 0.1 49 64 406 421 401 426 0.81 # 45621 # 47042 # 1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.579 3_11 - 522 AAA_21 PF13304.1 303 9.9e-14 45.5 0.1 1 2 7.1e-07 0.00011 15.7 0.0 2 24 27 49 27 76 0.83 # 8784 # 10349 # 1 # ID=3_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 3_11 - 522 AAA_21 PF13304.1 303 9.9e-14 45.5 0.1 2 2 2.1e-10 3.3e-08 27.3 0.2 261 301 280 318 243 320 0.90 # 8784 # 10349 # 1 # ID=3_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 1_67 - 74 zf-dskA_traR PF01258.12 36 4e-15 48.9 2.2 1 1 3.5e-17 5.6e-15 48.4 2.2 5 35 36 66 29 72 0.86 # 48498 # 48719 # 1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.486 1_28 - 372 DUF2316 PF10078.4 89 0.025 8.2 9.4 1 2 0.00018 0.029 8.0 2.7 5 45 198 238 193 249 0.88 # 20694 # 21809 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.584 1_28 - 372 DUF2316 PF10078.4 89 0.025 8.2 9.4 2 2 0.008 1.3 2.7 0.6 5 42 251 288 246 300 0.86 # 20694 # 21809 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.584 2_14 - 262 AAA PF00004.24 132 1.6e-07 25.1 0.0 1 1 3.5e-09 2.8e-07 24.4 0.0 1 111 102 202 102 230 0.70 # 9730 # 10515 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_23 - 323 AAA PF00004.24 132 2.4e-06 21.3 0.0 1 1 7.1e-08 5.6e-06 20.2 0.0 3 97 45 152 43 181 0.68 # 15179 # 16147 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_35 - 325 HTH_37 PF13744.1 80 0.00021 14.7 1.3 1 2 0.0091 1.4 2.4 0.1 27 55 9 37 6 43 0.82 # 26046 # 27020 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.447 1_35 - 325 HTH_37 PF13744.1 80 0.00021 14.7 1.3 2 2 3.5e-05 0.0055 10.1 0.1 27 53 156 182 135 186 0.92 # 26046 # 27020 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.447 7_1 - 400 zf-C4_Topoisom PF01396.14 39 0.019 8.1 9.2 1 3 0.0002 0.032 7.4 0.3 22 36 53 66 43 69 0.86 # 176 # 1375 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.562 7_1 - 400 zf-C4_Topoisom PF01396.14 39 0.019 8.1 9.2 2 3 0.0041 0.65 3.2 0.5 2 10 73 81 72 82 0.83 # 176 # 1375 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.562 7_1 - 400 zf-C4_Topoisom PF01396.14 39 0.019 8.1 9.2 3 3 0.022 3.5 0.9 0.2 3 15 362 374 361 379 0.86 # 176 # 1375 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.562 1_23 - 323 TIGR00064 TIGR00064 279 0.00011 14.7 0.2 1 1 1.4e-06 0.00022 13.7 0.0 72 111 33 72 4 76 0.73 # 15179 # 16147 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_9 - 400 TIGR01394 TIGR01394 594 0.0024 9.3 0.0 1 1 2.2e-05 0.0035 8.8 0.0 408 486 267 343 261 354 0.84 # 5020 # 6219 # -1 # ID=2_9;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.636 1_40 - 227 N6_N4_Mtase PF01555.13 231 1.4e-34 113.1 0.0 1 1 4.4e-34 6.9e-32 104.3 0.0 1 227 21 199 21 203 0.91 # 30510 # 31190 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 2_4 - 121 MerR_1 PF13411.1 69 8.6e-14 44.7 0.0 1 1 1.8e-15 1.4e-13 44.0 0.0 1 68 4 72 4 73 0.97 # 2062 # 2424 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.697 2_12 - 95 MerR_1 PF13411.1 69 0.00072 12.9 0.0 1 1 1.8e-05 0.0015 11.9 0.0 44 67 2 25 1 27 0.92 # 8252 # 8536 # -1 # ID=2_12;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.607 1_65 - 79 cobW PF02492.14 178 3.9e-05 16.7 0.1 1 1 6e-07 4.8e-05 16.4 0.1 4 25 48 73 45 78 0.78 # 47615 # 47851 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.388 3_12 - 341 cobW PF02492.14 178 0.0013 11.8 0.0 1 1 2.8e-05 0.0022 11.0 0.0 4 30 5 31 3 53 0.72 # 10334 # 11356 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_23 - 323 AAA_16 PF13191.1 185 5.7e-11 36.3 1.2 1 1 2.3e-11 7.2e-10 32.7 0.3 22 179 38 153 24 162 0.76 # 15179 # 16147 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_65 - 79 AAA_16 PF13191.1 185 2.5e-05 17.9 0.0 1 1 8.6e-07 2.7e-05 17.8 0.0 26 51 46 71 32 78 0.85 # 47615 # 47851 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.388 2_14 - 262 AAA_16 PF13191.1 185 0.00023 14.7 0.1 1 1 1.7e-05 0.00054 13.5 0.1 23 51 98 126 84 166 0.79 # 9730 # 10515 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 3_7 - 1275 AAA_16 PF13191.1 185 0.00026 14.6 0.0 1 1 2.4e-05 0.00076 13.0 0.0 14 64 46 96 38 111 0.76 # 3891 # 7715 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.414 1_87 - 721 AAA_16 PF13191.1 185 0.00026 14.6 0.0 1 1 3.2e-05 0.001 12.6 0.0 21 55 182 216 179 247 0.85 # 65305 # 67467 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.539 1_23 - 323 AAA_22 PF13401.1 131 7.9e-16 52.0 0.3 1 1 4.5e-17 1.8e-15 50.8 0.3 3 129 39 170 36 172 0.77 # 15179 # 16147 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_14 - 262 AAA_22 PF13401.1 131 4.4e-06 20.5 0.1 1 2 1.1e-05 0.00044 14.0 0.2 2 28 97 123 96 159 0.74 # 9730 # 10515 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 2_14 - 262 AAA_22 PF13401.1 131 4.4e-06 20.5 0.1 2 2 0.0083 0.33 4.7 0.0 87 117 151 196 132 204 0.62 # 9730 # 10515 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 3_12 - 341 AAA_22 PF13401.1 131 5e-05 17.0 0.0 1 1 9.5e-06 0.00038 14.2 0.0 8 111 5 155 4 167 0.75 # 10334 # 11356 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_65 - 79 AAA_22 PF13401.1 131 0.00013 15.7 0.0 1 1 7.5e-06 0.0003 14.5 0.0 4 31 44 71 36 76 0.85 # 47615 # 47851 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.388 2_4 - 121 DUF977 PF06163.6 127 0.00048 13.5 0.1 1 1 5.9e-06 0.00094 12.5 0.0 27 70 4 47 2 65 0.90 # 2062 # 2424 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.697 2_14 - 262 TIGR00362 TIGR00362 437 7.2e-13 41.5 0.0 1 1 7.2e-15 1.1e-12 40.9 0.0 138 240 100 200 77 220 0.90 # 9730 # 10515 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 6_3 - 253 HTH_AraC PF00165.18 42 7.3e-17 54.3 0.6 1 2 4.6e-08 7.3e-06 19.3 0.0 4 39 154 188 151 191 0.87 # 1461 # 2219 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.464 6_3 - 253 HTH_AraC PF00165.18 42 7.3e-17 54.3 0.6 2 2 2.2e-12 3.5e-10 33.1 0.3 11 38 209 237 207 238 0.95 # 1461 # 2219 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.464 2_21 - 187 NUMOD1 PF07453.8 37 0.00085 12.8 0.0 1 1 1.1e-05 0.0017 11.8 0.0 19 37 164 182 164 182 0.94 # 15294 # 15854 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 3_11 - 522 AAA_29 PF13555.1 62 1.5e-07 24.5 0.0 1 1 5.6e-09 2.9e-07 23.5 0.0 2 49 5 50 4 57 0.84 # 8784 # 10349 # 1 # ID=3_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 2_14 - 262 AAA_29 PF13555.1 62 2.2e-05 17.5 0.0 1 1 8.4e-07 4.5e-05 16.5 0.0 5 47 80 125 78 136 0.83 # 9730 # 10515 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_65 - 79 AAA_29 PF13555.1 62 0.0011 12.1 0.0 1 1 2.6e-05 0.0014 11.8 0.0 14 40 34 61 31 75 0.86 # 47615 # 47851 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.388 1_20 - 298 HTH_1 PF00126.22 60 6.1e-16 51.5 0.0 1 1 1.2e-17 1.8e-15 50.0 0.0 2 60 7 65 6 65 0.96 # 12452 # 13345 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.407 1_22 - 346 LZ_Tnp_IS481 PF13011.1 85 7.6e-06 19.8 0.2 1 1 1.1e-07 1.8e-05 18.6 0.2 12 69 27 82 15 89 0.91 # 13953 # 14990 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 5_6 - 119 HTH_Tnp_Tc3_1 PF11427.3 50 0.00034 13.8 0.0 1 1 3.6e-06 0.00058 13.1 0.0 12 44 9 41 2 43 0.92 # 4396 # 4752 # 1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 1_67 - 74 Tnp_zf-ribbon_2 PF13842.1 32 0.0005 14.1 0.8 1 1 5.1e-06 0.00081 13.4 0.8 15 32 33 61 21 61 0.82 # 48498 # 48719 # 1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.486 2_21 - 187 HTH_Tnp_IS630 PF01710.11 120 5.3e-05 16.5 0.0 1 1 1.3e-06 0.0001 15.6 0.0 10 42 157 185 151 186 0.86 # 15294 # 15854 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 4_2 - 186 HTH_Tnp_IS630 PF01710.11 120 0.00015 15.0 0.0 1 1 3.9e-06 0.00031 14.0 0.0 8 44 148 184 145 185 0.90 # 3231 # 3788 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 2_14 - 262 AAA_28 PF13521.1 163 1.4e-05 18.6 1.1 1 1 4.6e-07 7.3e-05 16.3 0.8 1 24 101 124 101 239 0.90 # 9730 # 10515 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_22 - 346 HTH_32 PF13565.1 77 2.7e-12 41.0 3.6 1 2 0.004 0.21 6.0 0.1 32 77 24 61 9 61 0.80 # 13953 # 14990 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_22 - 346 HTH_32 PF13565.1 77 2.7e-12 41.0 3.6 2 2 1.5e-13 7.8e-12 39.5 0.3 1 77 56 136 56 136 0.82 # 13953 # 14990 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_24 - 555 HTH_32 PF13565.1 77 0.00018 15.9 8.9 1 3 0.005 0.26 5.7 0.1 33 77 11 52 2 52 0.67 # 16137 # 17801 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.555 1_24 - 555 HTH_32 PF13565.1 77 0.00018 15.9 8.9 2 3 0.0017 0.089 7.2 0.1 21 63 61 113 54 120 0.69 # 16137 # 17801 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.555 1_24 - 555 HTH_32 PF13565.1 77 0.00018 15.9 8.9 3 3 0.0083 0.44 5.0 0.1 1 18 131 148 131 160 0.79 # 16137 # 17801 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.555 2_21 - 187 HTH_32 PF13565.1 77 0.0011 13.3 5.4 1 1 7.9e-05 0.0042 11.5 3.5 7 77 124 182 119 182 0.68 # 15294 # 15854 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 2_21 - 187 HTH_3 PF01381.17 55 0.00067 13.1 0.4 1 1 1.1e-05 0.0018 11.7 0.4 2 31 152 183 151 184 0.86 # 15294 # 15854 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 1_22 - 346 HTH_23 PF13384.1 50 2.8e-11 36.3 2.8 1 1 3.6e-12 6.3e-11 35.2 0.0 3 50 26 73 24 73 0.94 # 13953 # 14990 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 5_6 - 119 HTH_23 PF13384.1 50 9.9e-08 25.1 0.1 1 1 1.1e-08 1.9e-07 24.2 0.1 9 39 9 39 8 40 0.92 # 4396 # 4752 # 1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 2_7 - 236 HTH_23 PF13384.1 50 2.3e-07 23.9 0.9 1 1 3.5e-08 6.2e-07 22.5 0.9 3 45 23 71 21 77 0.87 # 3436 # 4143 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.647 1_50 - 666 HTH_23 PF13384.1 50 1.8e-05 17.9 0.0 1 1 3.4e-06 6e-05 16.2 0.0 13 45 152 181 149 186 0.88 # 36267 # 38264 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.586 1_25 - 187 HTH_23 PF13384.1 50 2.5e-05 17.4 0.0 1 1 3.7e-06 6.5e-05 16.1 0.0 17 42 158 183 148 186 0.82 # 17785 # 18345 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.561 2_21 - 187 HTH_23 PF13384.1 50 3.7e-05 16.9 1.3 1 1 2.6e-06 4.6e-05 16.6 0.1 10 39 151 183 148 184 0.82 # 15294 # 15854 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 4_2 - 186 HTH_23 PF13384.1 50 7e-05 16.0 0.3 1 1 4e-06 7e-05 16.0 0.3 5 39 146 180 142 184 0.87 # 3231 # 3788 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 2_10 - 226 HTH_23 PF13384.1 50 0.0014 11.9 0.2 1 1 0.00043 0.0077 9.5 0.0 10 35 22 51 14 64 0.75 # 6298 # 6975 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_24 - 555 HTH_23 PF13384.1 50 0.0057 10.0 0.1 1 2 0.00032 0.0057 10.0 0.1 20 39 34 53 29 57 0.88 # 16137 # 17801 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.555 1_24 - 555 HTH_23 PF13384.1 50 0.0057 10.0 0.1 2 2 0.0052 0.091 6.1 0.5 32 42 130 140 128 147 0.84 # 16137 # 17801 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.555 2_21 - 187 HTH_7 PF02796.10 45 1.9e-16 53.3 0.3 1 1 1.4e-17 3.8e-16 52.3 0.3 1 44 141 184 141 185 0.98 # 15294 # 15854 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 4_2 - 186 HTH_7 PF02796.10 45 3.7e-13 42.7 1.1 1 1 3.1e-14 8.2e-13 41.6 0.1 1 44 141 181 141 182 0.97 # 3231 # 3788 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 1_25 - 187 HTH_7 PF02796.10 45 1.3e-08 28.2 0.2 1 1 1.1e-09 2.8e-08 27.1 0.2 1 42 140 179 140 181 0.93 # 17785 # 18345 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.561 5_6 - 119 HTH_7 PF02796.10 45 2.5e-06 20.9 0.2 1 1 1.8e-07 4.9e-06 20.0 0.2 7 42 3 38 1 40 0.91 # 4396 # 4752 # 1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 1_24 - 555 HTH_7 PF02796.10 45 4.2e-05 17.0 0.2 1 1 6.1e-06 0.00016 15.1 0.2 23 43 33 53 30 54 0.93 # 16137 # 17801 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.555 1_22 - 346 HTH_7 PF02796.10 45 0.00065 13.2 0.2 1 1 0.00041 0.011 9.2 0.0 15 38 34 57 16 61 0.84 # 13953 # 14990 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_23 - 323 NB-ARC PF00931.17 287 0.00063 12.2 0.3 1 1 5.9e-06 0.00095 11.6 0.3 8 104 29 126 22 144 0.74 # 15179 # 16147 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_14 - 262 Mg_chelatase PF01078.16 207 0.0008 12.1 0.0 1 1 1.1e-05 0.0017 11.1 0.0 23 43 100 120 96 153 0.86 # 9730 # 10515 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_22 - 346 HTH_29 PF13551.1 112 4.4e-19 62.3 0.2 1 1 4e-20 1.1e-18 61.0 0.2 1 111 30 139 30 140 0.92 # 13953 # 14990 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_7 - 236 HTH_29 PF13551.1 112 7.2e-07 23.0 1.7 1 1 4.4e-08 1.2e-06 22.3 0.3 13 77 39 109 27 132 0.79 # 3436 # 4143 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.647 1_24 - 555 HTH_29 PF13551.1 112 1.1e-05 19.2 0.5 1 2 6.8e-05 0.0018 12.0 0.1 14 91 33 109 25 121 0.65 # 16137 # 17801 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.555 1_24 - 555 HTH_29 PF13551.1 112 1.1e-05 19.2 0.5 2 2 0.022 0.59 3.9 0.0 25 44 128 147 125 155 0.80 # 16137 # 17801 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.555 1_25 - 187 HTH_29 PF13551.1 112 2.3e-05 18.1 1.1 1 1 1.1e-05 0.00028 14.6 0.0 10 38 157 184 150 185 0.90 # 17785 # 18345 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.561 5_6 - 119 HTH_29 PF13551.1 112 0.00016 15.4 0.0 1 1 1e-05 0.00028 14.6 0.0 8 34 14 39 8 51 0.84 # 4396 # 4752 # 1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 4_2 - 186 HTH_29 PF13551.1 112 0.00017 15.3 0.6 1 1 6.1e-05 0.0016 12.2 0.0 4 35 151 181 148 184 0.90 # 3231 # 3788 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 1_23 - 323 Arch_ATPase PF01637.13 234 5.8e-05 16.4 0.2 1 1 8.6e-07 0.00014 15.2 0.2 8 135 30 142 27 164 0.68 # 15179 # 16147 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_14 - 262 PhoH PF02562.11 205 2e-08 27.2 0.1 1 1 2.9e-10 4.7e-08 26.0 0.1 3 61 83 142 81 179 0.77 # 9730 # 10515 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_23 - 323 AAA_5 PF07728.9 139 0.00013 15.3 0.1 1 1 1.4e-05 0.0011 12.2 0.2 5 90 46 149 43 152 0.85 # 15179 # 16147 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_14 - 262 AAA_5 PF07728.9 139 0.0003 14.1 0.2 1 1 8.6e-06 0.00069 12.9 0.2 1 19 101 119 101 243 0.78 # 9730 # 10515 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_23 - 323 ResIII PF04851.10 184 1.6e-05 18.4 0.2 1 2 3.4e-05 0.0027 11.1 0.3 29 101 44 110 20 121 0.72 # 15179 # 16147 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_23 - 323 ResIII PF04851.10 184 1.6e-05 18.4 0.2 2 2 0.0012 0.092 6.1 0.0 131 162 109 140 96 153 0.63 # 15179 # 16147 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_65 - 79 ResIII PF04851.10 184 0.00095 12.6 0.0 1 1 1.3e-05 0.001 12.4 0.0 22 51 29 70 8 76 0.75 # 47615 # 47851 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.388 1_87 - 721 TrwB_AAD_bind PF10412.4 386 2.5e-145 477.4 0.0 1 1 8e-147 3.2e-145 477.1 0.0 2 386 172 561 171 561 0.99 # 65305 # 67467 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.539 1_71 - 883 TrwB_AAD_bind PF10412.4 386 8.7e-07 21.3 0.2 1 1 9.3e-08 3.7e-06 19.3 0.0 15 53 479 517 470 552 0.81 # 49575 # 52223 # 1 # ID=1_71;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.570 1_23 - 323 TrwB_AAD_bind PF10412.4 386 0.00022 13.4 0.5 1 2 6.6e-05 0.0026 9.9 0.0 14 44 39 69 35 76 0.83 # 15179 # 16147 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_23 - 323 TrwB_AAD_bind PF10412.4 386 0.00022 13.4 0.5 2 2 0.085 3.4 -0.3 0.0 234 275 115 158 112 169 0.78 # 15179 # 16147 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_65 - 79 TrwB_AAD_bind PF10412.4 386 0.00024 13.3 0.0 1 1 8.2e-06 0.00033 12.9 0.0 12 44 41 73 31 76 0.85 # 47615 # 47851 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.388 1_65 - 79 AAA_18 PF13238.1 129 0.00014 15.7 0.9 1 2 0.046 3.7 1.5 0.0 52 90 11 44 2 49 0.58 # 47615 # 47851 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.388 1_65 - 79 AAA_18 PF13238.1 129 0.00014 15.7 0.9 2 2 9.8e-06 0.00078 13.3 0.3 3 22 49 68 48 77 0.80 # 47615 # 47851 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.388 1_23 - 323 AAA_18 PF13238.1 129 0.00015 15.7 0.0 1 1 3.3e-06 0.00027 14.8 0.0 1 23 43 90 43 138 0.67 # 15179 # 16147 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 3_11 - 522 TIGR00611 TIGR00611 365 1e-08 27.9 2.7 1 3 2.2e-10 3.5e-08 26.2 0.0 3 56 4 57 2 79 0.92 # 8784 # 10349 # 1 # ID=3_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 3_11 - 522 TIGR00611 TIGR00611 365 1e-08 27.9 2.7 2 3 0.04 6.4 -1.0 0.1 322 345 297 319 270 330 0.72 # 8784 # 10349 # 1 # ID=3_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 3_11 - 522 TIGR00611 TIGR00611 365 1e-08 27.9 2.7 3 3 0.02 3.2 -0.0 0.2 150 191 453 493 402 508 0.46 # 8784 # 10349 # 1 # ID=3_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 1_65 - 79 AAA_32 PF13654.1 509 0.0012 11.0 0.0 1 1 9.2e-06 0.0015 10.8 0.0 27 58 41 72 35 77 0.87 # 47615 # 47851 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.388 1_36 - 425 IMS_HHH PF11798.3 32 5.3e-08 26.2 0.1 1 1 7.8e-10 1.2e-07 25.0 0.1 5 32 174 201 169 201 0.89 # 27102 # 28376 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 2_21 - 187 HTH_psq PF05225.11 45 0.0002 14.5 0.0 1 1 2.5e-06 0.0004 13.5 0.0 21 39 166 184 165 186 0.91 # 15294 # 15854 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 1_29 - 170 TIGR01406 TIGR01406 231 0.00052 12.9 0.0 1 1 5e-06 0.0008 12.3 0.0 3 59 106 156 105 159 0.81 # 21802 # 22311 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.596 2_14 - 262 AAA_3 PF07726.6 131 0.00082 12.6 0.0 1 1 1.2e-05 0.0019 11.4 0.0 2 72 102 171 101 201 0.70 # 9730 # 10515 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_71 - 883 DUF87 PF01935.12 229 2.2e-07 24.4 0.0 1 1 1.1e-08 8.8e-07 22.5 0.0 26 221 482 668 468 676 0.75 # 49575 # 52223 # 1 # ID=1_71;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.570 1_23 - 323 DUF87 PF01935.12 229 0.00094 12.6 0.2 1 1 0.0001 0.0083 9.5 0.0 26 52 43 69 40 73 0.85 # 15179 # 16147 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_22 - 346 HTH_28 PF13518.1 52 1.6e-09 31.3 0.1 1 1 5e-10 1.1e-08 28.5 0.0 1 50 29 79 29 82 0.91 # 13953 # 14990 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_7 - 236 HTH_28 PF13518.1 52 8.5e-09 28.9 1.0 1 1 6.4e-10 1.5e-08 28.2 0.1 1 46 26 78 26 87 0.76 # 3436 # 4143 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.647 1_25 - 187 HTH_28 PF13518.1 52 5.4e-06 20.0 0.9 1 1 3.9e-07 8.8e-06 19.3 0.1 7 38 152 184 148 185 0.88 # 17785 # 18345 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.561 2_21 - 187 HTH_28 PF13518.1 52 7.7e-05 16.3 0.1 1 1 3.4e-06 7.7e-05 16.3 0.1 9 34 158 183 147 184 0.84 # 15294 # 15854 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 4_2 - 186 HTH_28 PF13518.1 52 0.00021 14.8 0.0 1 1 3e-05 0.00068 13.2 0.0 8 33 154 179 148 184 0.82 # 3231 # 3788 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 5_6 - 119 HTH_28 PF13518.1 52 0.00067 13.3 0.1 1 1 6.4e-05 0.0015 12.2 0.1 14 34 19 39 8 40 0.74 # 4396 # 4752 # 1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 1_24 - 555 HTH_28 PF13518.1 52 0.0029 11.2 0.0 1 2 0.00013 0.0029 11.2 0.0 15 35 34 54 32 64 0.90 # 16137 # 17801 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.555 1_24 - 555 HTH_28 PF13518.1 52 0.0029 11.2 0.0 2 2 0.086 2 2.2 0.4 26 37 129 140 125 145 0.87 # 16137 # 17801 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.555 1_23 - 323 TIGR00041 TIGR00041 196 0.00052 13.0 0.0 1 1 5.7e-06 0.00091 12.2 0.0 2 54 38 96 37 122 0.74 # 15179 # 16147 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_14 - 262 DnaB_C PF03796.10 259 0.00024 13.6 0.0 1 1 2.4e-06 0.00039 12.9 0.0 16 55 96 135 85 158 0.90 # 9730 # 10515 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 2_10 - 226 HTH_Tnp_1_2 PF13022.1 142 0.0013 12.1 0.0 1 1 1.2e-05 0.0018 11.6 0.0 22 77 24 73 5 79 0.76 # 6298 # 6975 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 2_12 - 95 MerR-DNA-bind PF09278.6 65 4.1e-21 68.8 0.6 1 1 6.3e-23 5e-21 68.5 0.6 2 65 2 63 1 63 0.95 # 8252 # 8536 # -1 # ID=2_12;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.607 2_4 - 121 MerR-DNA-bind PF09278.6 65 0.0013 12.8 7.4 1 1 2.5e-05 0.002 12.1 7.4 1 64 47 108 47 109 0.85 # 2062 # 2424 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.697 1_35 - 325 HTH_24 PF13412.1 48 4.5e-05 16.4 0.5 1 1 2.5e-06 0.0002 14.3 0.0 13 39 157 182 153 184 0.84 # 26046 # 27020 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.447 5_6 - 119 HTH_24 PF13412.1 48 0.0014 11.7 0.0 1 1 3.6e-05 0.0028 10.6 0.0 21 39 21 39 20 40 0.94 # 4396 # 4752 # 1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 2_14 - 262 Sigma54_activ_2 PF14532.1 138 0.00047 13.8 0.1 1 1 7.7e-06 0.0012 12.4 0.0 3 44 79 122 77 151 0.81 # 9730 # 10515 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 6_3 - 253 HTH_18 PF12833.2 81 4.6e-15 49.1 0.1 1 1 7.8e-17 1.2e-14 47.7 0.0 2 77 165 238 164 240 0.95 # 1461 # 2219 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.464 2_21 - 187 HTH_10 PF04967.7 53 1.9e-05 17.8 0.2 1 2 0.055 8.7 -0.3 0.1 3 18 124 139 123 154 0.71 # 15294 # 15854 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 2_21 - 187 HTH_10 PF04967.7 53 1.9e-05 17.8 0.2 2 2 8.6e-07 0.00014 15.0 0.0 27 45 165 183 162 185 0.93 # 15294 # 15854 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 1_22 - 346 HTH_33 PF13592.1 60 9.4e-10 31.5 0.3 1 1 2.4e-11 3.8e-09 29.6 0.3 3 50 108 155 107 157 0.94 # 13953 # 14990 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_23 - 323 DUF2075 PF09848.4 352 2.8e-06 20.0 0.1 1 1 5.2e-08 4.1e-06 19.5 0.1 2 97 41 138 40 165 0.71 # 15179 # 16147 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_65 - 79 DUF2075 PF09848.4 352 9.2e-06 18.3 0.0 1 1 1.4e-07 1.1e-05 18.1 0.0 4 30 47 73 44 78 0.79 # 47615 # 47851 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.388 1_90 - 1753 UvrD_C_2 PF13538.1 104 8.3e-08 25.9 0.4 1 1 9.7e-09 7.7e-07 22.8 0.2 3 102 1337 1440 1335 1442 0.79 # 68183 # 73441 # 1 # ID=1_90;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.614 3_12 - 341 UvrD_C_2 PF13538.1 104 0.00012 15.7 0.0 1 1 3.1e-06 0.00025 14.8 0.0 37 103 247 329 225 330 0.65 # 10334 # 11356 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_12 - 117 HTH_OrfB_IS605 PF12323.3 46 1.3e-18 59.7 0.0 1 1 1.3e-20 2.1e-18 59.0 0.0 1 45 1 45 1 46 0.98 # 6341 # 6691 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.462 5_6 - 119 HTH_36 PF13730.1 55 0.00051 13.8 0.0 1 1 5.7e-06 0.00091 12.9 0.0 28 47 20 39 3 40 0.88 # 4396 # 4752 # 1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 1_23 - 323 T2SE PF00437.15 272 4.2e-06 19.3 0.7 1 1 1.3e-07 2.1e-05 17.1 0.7 110 161 22 72 6 137 0.81 # 15179 # 16147 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_7 - 236 HTH_Tnp_Mu_2 PF09039.6 108 3.9e-06 20.2 0.0 1 1 5.8e-08 9.2e-06 19.0 0.0 37 101 100 163 72 166 0.91 # 3436 # 4143 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.647 1_23 - 323 NACHT PF05729.7 166 0.00077 12.7 0.2 1 1 2.3e-05 0.0018 11.5 0.2 1 28 41 68 41 140 0.77 # 15179 # 16147 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_14 - 262 NACHT PF05729.7 166 0.0019 11.4 2.1 1 2 0.00012 0.0094 9.2 0.3 3 23 102 122 100 148 0.84 # 9730 # 10515 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 2_14 - 262 NACHT PF05729.7 166 0.0019 11.4 2.1 2 2 0.023 1.8 1.7 0.1 80 127 156 200 139 221 0.76 # 9730 # 10515 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_23 - 323 UPF0079 PF02367.12 123 0.00018 14.7 0.0 1 1 2.2e-06 0.00035 13.8 0.0 3 45 28 70 26 114 0.84 # 15179 # 16147 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_14 - 262 AAA_17 PF13207.1 121 0.00018 15.9 0.0 1 1 3.1e-06 0.00025 15.4 0.0 2 38 102 133 101 232 0.74 # 9730 # 10515 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_23 - 323 AAA_17 PF13207.1 121 0.00023 15.5 0.1 1 1 6.8e-06 0.00054 14.4 0.0 1 40 42 89 42 186 0.63 # 15179 # 16147 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_30 - 139 DrsE PF02635.10 122 0.00094 12.8 0.0 1 1 8.8e-06 0.0014 12.3 0.0 44 94 10 59 6 73 0.85 # 22414 # 22830 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.525 1_23 - 323 TIGR02211 TIGR02211 221 0.00073 12.3 0.0 1 1 7.3e-06 0.0012 11.7 0.0 11 51 20 60 12 86 0.88 # 15179 # 16147 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_14 - 262 AAA_25 PF13481.1 194 0.00017 14.6 0.0 1 1 1.8e-06 0.00028 13.8 0.0 29 57 95 123 76 170 0.86 # 9730 # 10515 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 3_12 - 341 Viral_helicase1 PF01443.13 234 7.5e-12 38.8 0.1 1 2 3.9e-07 3.1e-05 17.1 0.0 2 30 5 38 4 59 0.76 # 10334 # 11356 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 3_12 - 341 Viral_helicase1 PF01443.13 234 7.5e-12 38.8 0.1 2 2 1.1e-07 8.7e-06 18.9 0.1 63 233 133 330 124 331 0.68 # 10334 # 11356 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_65 - 79 Viral_helicase1 PF01443.13 234 0.00033 13.7 0.1 1 1 6.7e-06 0.00053 13.1 0.1 3 29 49 73 47 77 0.84 # 47615 # 47851 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.388 3_11 - 522 AAA_15 PF13175.1 415 5.3e-17 55.4 0.1 1 2 3.4e-09 2.7e-07 23.5 0.0 2 45 5 47 4 63 0.90 # 8784 # 10349 # 1 # ID=3_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 3_11 - 522 AAA_15 PF13175.1 415 5.3e-17 55.4 0.1 2 2 3.3e-11 2.6e-09 30.1 0.1 332 414 235 318 183 319 0.74 # 8784 # 10349 # 1 # ID=3_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 1_65 - 79 AAA_15 PF13175.1 415 0.0006 12.4 0.1 1 1 7.6e-06 0.0006 12.4 0.1 16 54 10 76 1 78 0.67 # 47615 # 47851 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.388 1_65 - 79 Pox_A32 PF04665.7 241 0.00025 13.9 0.0 1 1 2.9e-06 0.00046 13.1 0.0 9 40 40 71 35 74 0.88 # 47615 # 47851 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.388 2_14 - 262 RuvB_N PF05496.7 234 0.00083 12.0 0.0 1 1 7.1e-06 0.0011 11.5 0.0 48 75 97 124 45 170 0.84 # 9730 # 10515 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_23 - 323 AAA_14 PF13173.1 128 6.5e-06 19.6 0.0 1 1 3.5e-07 2.7e-05 17.6 0.0 2 96 40 164 39 193 0.62 # 15179 # 16147 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_65 - 79 AAA_14 PF13173.1 128 0.00017 15.1 0.1 1 2 0.059 4.7 0.7 0.0 78 104 17 42 11 49 0.75 # 47615 # 47851 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.388 1_65 - 79 AAA_14 PF13173.1 128 0.00017 15.1 0.1 2 2 1.1e-05 0.00085 12.8 0.0 6 28 48 70 43 76 0.85 # 47615 # 47851 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.388 5_6 - 119 HTH_Tnp_ISL3 PF13542.1 52 0.0002 14.1 0.0 1 1 9.3e-06 0.00049 12.9 0.0 31 49 21 39 20 40 0.90 # 4396 # 4752 # 1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 1_22 - 346 HTH_Tnp_ISL3 PF13542.1 52 0.00038 13.2 0.4 1 1 3.4e-05 0.0018 11.0 0.4 18 49 30 62 26 62 0.79 # 13953 # 14990 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_24 - 555 HTH_Tnp_ISL3 PF13542.1 52 0.00058 12.6 0.0 1 1 4e-05 0.0021 10.8 0.0 30 49 34 53 32 55 0.90 # 16137 # 17801 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.555 2_4 - 121 MerR PF00376.18 38 2e-06 20.9 0.0 1 1 3.9e-08 3.1e-06 20.3 0.0 1 38 5 42 5 42 0.95 # 2062 # 2424 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.697 5_6 - 119 MerR PF00376.18 38 0.0014 11.8 3.0 1 2 0.00027 0.022 8.0 0.1 4 21 22 39 19 49 0.84 # 4396 # 4752 # 1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 5_6 - 119 MerR PF00376.18 38 0.0014 11.8 3.0 2 2 0.0054 0.43 3.8 0.7 14 22 90 98 89 110 0.69 # 4396 # 4752 # 1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 1_23 - 323 AAA_33 PF13671.1 143 0.00026 14.5 0.0 1 1 7.3e-06 0.00058 13.3 0.0 1 45 42 100 42 132 0.60 # 15179 # 16147 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_14 - 262 AAA_33 PF13671.1 143 0.00058 13.3 0.2 1 1 1.8e-05 0.0014 12.1 0.2 2 36 102 142 102 255 0.67 # 9730 # 10515 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 2_21 - 187 CENP-B_N PF04218.8 53 4.6e-06 19.6 0.0 1 1 5.4e-08 8.5e-06 18.7 0.0 17 43 156 182 152 186 0.92 # 15294 # 15854 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 1_65 - 79 ArgK PF03308.11 267 9.7e-06 18.0 0.0 1 1 6.2e-08 9.8e-06 18.0 0.0 31 59 46 74 24 77 0.87 # 47615 # 47851 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.388 1_87 - 721 T4SS-DNA_transf PF02534.9 469 7.4e-12 38.0 0.0 1 1 1.9e-13 1.5e-11 37.0 0.0 276 391 394 505 363 542 0.81 # 65305 # 67467 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.539 1_71 - 883 T4SS-DNA_transf PF02534.9 469 0.0003 13.0 0.0 1 2 0.0019 0.15 4.0 0.0 105 185 533 607 470 622 0.85 # 49575 # 52223 # 1 # ID=1_71;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.570 1_71 - 883 T4SS-DNA_transf PF02534.9 469 0.0003 13.0 0.0 2 2 0.00033 0.026 6.6 0.0 321 378 713 769 665 771 0.93 # 49575 # 52223 # 1 # ID=1_71;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.570 1_65 - 79 RNA_helicase PF00910.17 107 0.001 12.8 0.1 1 1 1.1e-05 0.0017 12.1 0.1 3 28 49 74 47 78 0.85 # 47615 # 47851 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.388 1_65 - 79 NTPase_1 PF03266.10 168 8.1e-05 15.9 0.1 1 1 7.8e-07 0.00012 15.3 0.1 2 27 47 72 46 76 0.87 # 47615 # 47851 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.388 9_1 - 168 DDE_Tnp_IS1 PF03400.8 131 1.6e-79 257.9 0.8 1 1 3.7e-81 1.9e-79 257.7 0.8 1 131 37 167 37 167 0.99 # 16 # 519 # -1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.548 3_13 - 37 DDE_Tnp_IS1 PF03400.8 131 1.7e-18 60.6 0.3 1 1 3.4e-20 1.8e-18 60.5 0.3 96 131 1 36 1 36 0.98 # 11610 # 11720 # -1 # ID=3_13;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.495 5_8 - 37 DDE_Tnp_IS1 PF03400.8 131 1.7e-18 60.6 0.3 1 1 3.4e-20 1.8e-18 60.5 0.3 96 131 1 36 1 36 0.98 # 5579 # 5689 # -1 # ID=5_8;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.495 1_28 - 372 TIGR00422 TIGR00422 863 0.021 6.0 17.3 1 1 0.00016 0.025 5.7 16.6 719 856 133 270 77 276 0.83 # 20694 # 21809 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.584 1_92 - 188 Glyco_trans_1_3 PF13528.1 318 0.00019 14.2 0.0 1 1 1.8e-06 0.00029 13.6 0.0 157 213 26 82 3 89 0.77 # 74256 # 74819 # 1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.587 3_11 - 522 TIGR00634 TIGR00634 563 0.00036 12.7 0.2 1 1 4.2e-06 0.00067 11.9 0.0 1 46 3 48 3 69 0.93 # 8784 # 10349 # 1 # ID=3_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 1_22 - 346 HTH_17 PF12728.2 51 0.00021 15.1 0.3 1 1 0.00013 0.0068 10.3 0.0 2 45 41 90 40 92 0.87 # 13953 # 14990 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 5_6 - 119 HTH_17 PF12728.2 51 0.00043 14.1 1.4 1 2 4.6e-05 0.0025 11.7 0.0 6 41 22 56 20 65 0.77 # 4396 # 4752 # 1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 5_6 - 119 HTH_17 PF12728.2 51 0.00043 14.1 1.4 2 2 0.085 4.5 1.2 0.4 14 34 88 109 82 116 0.81 # 4396 # 4752 # 1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 2_7 - 236 HTH_17 PF12728.2 51 0.0012 12.7 0.0 1 1 4.9e-05 0.0026 11.6 0.0 7 24 48 65 46 89 0.86 # 3436 # 4143 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.647 1_67 - 74 Zn-ribbon_8 PF09723.5 42 8.5e-05 16.1 0.6 1 1 1e-06 0.00016 15.2 0.6 6 39 35 67 34 69 0.78 # 48498 # 48719 # 1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.486 7_1 - 400 Zn_Tnp_IS1595 PF12760.2 46 0.011 9.2 6.7 1 2 0.0026 0.41 4.1 1.2 19 32 73 85 57 97 0.74 # 176 # 1375 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.562 7_1 - 400 Zn_Tnp_IS1595 PF12760.2 46 0.011 9.2 6.7 2 2 0.0005 0.08 6.4 0.4 8 32 350 374 346 379 0.84 # 176 # 1375 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.562 5_6 - 119 HTH_11 PF08279.7 55 2.8e-05 17.3 0.0 1 1 7e-07 5.5e-05 16.4 0.0 18 37 20 39 5 40 0.80 # 4396 # 4752 # 1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 2_21 - 187 HTH_11 PF08279.7 55 0.00019 14.6 0.1 1 1 2.5e-05 0.002 11.4 0.0 20 37 166 183 162 184 0.91 # 15294 # 15854 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 5_6 - 119 Sigma70_ECF PF07638.6 185 0.00038 13.7 0.0 1 1 3.8e-06 0.0006 13.1 0.0 143 174 9 40 2 52 0.86 # 4396 # 4752 # 1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 1_23 - 323 PIF1 PF05970.9 364 4.5e-05 16.0 0.0 1 1 6.3e-07 0.0001 14.9 0.0 7 127 27 149 23 167 0.68 # 15179 # 16147 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 4_2 - 186 TrmB PF01978.14 68 8.8e-05 15.8 0.0 1 1 2.3e-06 0.00018 14.8 0.0 19 44 155 180 150 181 0.89 # 3231 # 3788 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 1_25 - 187 TrmB PF01978.14 68 0.00016 14.9 0.0 1 1 4.1e-06 0.00033 13.9 0.0 21 45 157 181 150 184 0.90 # 17785 # 18345 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.561 5_6 - 119 LacI PF00356.16 46 0.00043 13.5 0.0 1 1 5.9e-06 0.00093 12.4 0.0 2 34 20 52 19 62 0.91 # 4396 # 4752 # 1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 3_11 - 522 DUF2813 PF11398.3 373 5.1e-05 16.0 1.2 1 2 4.6e-06 0.00074 12.2 0.0 11 49 12 51 3 56 0.79 # 8784 # 10349 # 1 # ID=3_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 3_11 - 522 DUF2813 PF11398.3 373 5.1e-05 16.0 1.2 2 2 0.0067 1.1 1.8 0.0 287 333 279 326 250 333 0.82 # 8784 # 10349 # 1 # ID=3_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 1_29 - 170 RNase_T PF00929.19 164 7e-07 23.2 0.0 1 1 6.3e-09 1e-06 22.7 0.0 1 55 106 152 106 158 0.89 # 21802 # 22311 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.596 1_71 - 883 AAA_10 PF12846.2 304 2.2e-49 162.1 0.0 1 1 9.2e-51 3.7e-49 161.3 0.0 1 294 479 768 479 774 0.87 # 49575 # 52223 # 1 # ID=1_71;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.570 1_87 - 721 AAA_10 PF12846.2 304 9.8e-07 22.0 0.0 1 1 1.3e-06 5.3e-05 16.3 0.0 4 295 188 493 186 498 0.52 # 65305 # 67467 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.539 1_23 - 323 AAA_10 PF12846.2 304 1.6e-06 21.3 0.1 1 2 1.7e-05 0.00067 12.7 0.0 3 34 42 73 40 106 0.73 # 15179 # 16147 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_23 - 323 AAA_10 PF12846.2 304 1.6e-06 21.3 0.1 2 2 0.0025 0.1 5.5 0.0 216 245 120 150 79 207 0.83 # 15179 # 16147 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_65 - 79 AAA_10 PF12846.2 304 0.00025 14.1 0.1 1 2 0.0099 0.39 3.6 0.0 272 286 15 33 2 37 0.74 # 47615 # 47851 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.388 1_65 - 79 AAA_10 PF12846.2 304 0.00025 14.1 0.1 2 2 0.00021 0.0085 9.0 0.0 2 29 45 72 44 76 0.89 # 47615 # 47851 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.388 4_2 - 186 HTH_20 PF12840.2 61 3.2e-06 20.5 0.2 1 2 0.011 0.59 3.6 0.0 33 52 8 27 4 28 0.91 # 3231 # 3788 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 4_2 - 186 HTH_20 PF12840.2 61 3.2e-06 20.5 0.2 2 2 2.7e-05 0.0014 12.0 0.1 3 43 110 177 108 180 0.91 # 3231 # 3788 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 5_5 - 326 HTH_20 PF12840.2 61 0.00012 15.4 0.0 1 2 0.0022 0.12 5.9 0.0 24 47 102 125 97 125 0.89 # 2673 # 3650 # -1 # ID=5_5;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.522 5_5 - 326 HTH_20 PF12840.2 61 0.00012 15.4 0.0 2 2 0.001 0.055 6.9 0.1 19 58 213 259 185 262 0.77 # 2673 # 3650 # -1 # ID=5_5;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.522 2_10 - 226 HTH_20 PF12840.2 61 0.00042 13.7 0.1 1 1 5.4e-05 0.0029 11.0 0.0 21 46 30 55 18 63 0.85 # 6298 # 6975 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_34 - 402 AAA_31 PF13614.1 157 0.00072 13.1 0.1 1 2 0.071 11 -0.6 0.0 12 61 120 174 110 209 0.55 # 24841 # 26046 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.468 1_34 - 402 AAA_31 PF13614.1 157 0.00072 13.1 0.1 2 2 3.1e-05 0.005 10.3 0.0 108 147 235 273 231 279 0.86 # 24841 # 26046 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.468 2_16 - 280 Pterin_bind PF00809.17 210 4.1e-58 189.7 0.0 1 1 3e-60 4.8e-58 189.5 0.0 1 210 7 216 7 216 0.98 # 11319 # 12158 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.617 2_14 - 262 IstB_IS21 PF01695.12 178 4.9e-69 224.8 0.1 1 1 8.2e-71 6.5e-69 224.4 0.1 2 177 55 230 54 231 0.98 # 9730 # 10515 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_65 - 79 IstB_IS21 PF01695.12 178 0.00041 13.3 0.0 1 1 5.2e-06 0.00041 13.3 0.0 38 69 35 66 9 75 0.76 # 47615 # 47851 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.388 1_36 - 425 DNA_pol_lambd_f PF10391.4 52 0.00051 13.2 0.0 1 1 1e-05 0.0016 11.5 0.0 5 29 183 207 179 218 0.85 # 27102 # 28376 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 1_90 - 1753 AAA_11 PF13086.1 236 0.00031 13.9 3.5 1 1 9e-06 0.00048 13.3 0.0 2 75 968 1038 967 1058 0.81 # 68183 # 73441 # 1 # ID=1_90;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.614 1_65 - 79 AAA_11 PF13086.1 236 0.00037 13.7 0.0 1 1 6.9e-06 0.00037 13.7 0.0 15 43 43 70 13 78 0.80 # 47615 # 47851 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.388 2_14 - 262 AAA_11 PF13086.1 236 0.00072 12.7 0.3 1 1 2.6e-05 0.0014 11.8 0.3 6 44 89 142 82 260 0.72 # 9730 # 10515 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_48 - 173 SSB PF00436.20 104 4.4e-43 139.0 0.4 1 1 3.6e-45 5.7e-43 138.6 0.4 1 103 6 112 6 113 0.96 # 35383 # 35901 # 1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_32 - 314 Glyco_trans_4_3 PF12000.3 171 2.1e-05 17.7 0.1 1 2 0.00077 0.12 5.5 0.0 14 84 112 182 97 188 0.79 # 23485 # 24426 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.538 1_32 - 314 Glyco_trans_4_3 PF12000.3 171 2.1e-05 17.7 0.1 2 2 3.4e-05 0.0054 9.9 0.0 19 65 209 256 201 261 0.90 # 23485 # 24426 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.538 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/a65f1559-3822-43f4-9b16-3464cd600fb8 # Target file: checkm_output/bins/pm366/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm366/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/a65f1559-3822-43f4-9b16-3464cd600fb8 checkm_output/bins/pm366/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:03:59 2017 # [ok]