# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_26 - 323 KaiC PF06745.8 227 0.00022 13.4 0.1 1 1 4.3e-06 0.00048 12.3 0.1 12 43 33 63 27 149 0.80 # 19448 # 20416 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_24 - 187 HTH_IclR PF09339.5 52 1.6e-05 17.5 0.0 1 1 8e-07 4.4e-05 16.1 0.0 18 40 158 180 145 181 0.93 # 17250 # 17810 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.565 1_27 - 346 HTH_IclR PF09339.5 52 0.00012 14.8 2.7 1 2 0.00024 0.013 8.2 0.0 16 37 38 59 27 68 0.84 # 20605 # 21642 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_27 - 346 HTH_IclR PF09339.5 52 0.00012 14.8 2.7 2 2 0.0023 0.13 5.1 0.5 30 40 127 137 125 138 0.90 # 20605 # 21642 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_26 - 323 ABC_tran PF00005.22 137 7.9e-06 19.3 0.1 1 1 1.4e-07 1.5e-05 18.4 0.1 2 90 31 120 30 159 0.75 # 19448 # 20416 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_24 - 187 HTH_22 PF13309.1 64 1.6e-05 17.7 0.1 1 1 4.5e-06 0.00025 13.9 0.0 45 63 161 179 158 180 0.87 # 17250 # 17810 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.565 1_29 - 298 HTH_22 PF13309.1 64 0.00088 12.1 0.2 1 2 0.0045 0.25 4.3 0.0 24 48 6 30 4 33 0.91 # 22250 # 23143 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.404 1_29 - 298 HTH_22 PF13309.1 64 0.00088 12.1 0.2 2 2 0.003 0.17 4.8 0.1 1 33 104 136 104 140 0.92 # 22250 # 23143 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.404 1_92 - 72 DUF463 PF04317.7 443 0.001 10.7 0.0 1 1 1.2e-05 0.0013 10.3 0.0 4 30 41 67 39 71 0.89 # 74882 # 75097 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.394 1_13 - 425 Cdd1 PF11731.3 93 0.00041 13.4 0.0 1 1 8.4e-06 0.00093 12.2 0.0 10 47 178 215 145 227 0.85 # 7219 # 8493 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.540 1_25 - 555 rve_3 PF13683.1 67 0.0003 13.4 1.5 1 1 9.6e-06 0.0011 11.6 1.5 12 58 282 331 278 339 0.84 # 17794 # 19458 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.556 1_86 - 701 FtsK_SpoIIIE PF01580.13 205 2e-05 17.2 0.1 1 2 1.6e-06 0.00017 14.1 0.0 39 63 294 322 281 325 0.84 # 70511 # 72613 # -1 # ID=1_86;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.567 1_86 - 701 FtsK_SpoIIIE PF01580.13 205 2e-05 17.2 0.1 2 2 0.025 2.8 0.4 0.0 76 166 349 443 347 451 0.78 # 70511 # 72613 # -1 # ID=1_86;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.567 1_27 - 346 HTH_38 PF13936.1 44 4.2e-07 22.5 0.8 1 1 5.7e-08 3.2e-06 19.7 0.0 10 41 30 61 26 62 0.89 # 20605 # 21642 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_24 - 187 HTH_38 PF13936.1 44 0.00015 14.4 0.1 1 1 9.6e-06 0.00053 12.6 0.1 15 41 152 179 148 181 0.88 # 17250 # 17810 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.565 1_26 - 323 MobB PF03205.9 140 0.00035 13.3 0.1 1 1 2.2e-05 0.0012 11.6 0.0 2 31 42 70 41 86 0.78 # 19448 # 20416 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_86 - 701 MobB PF03205.9 140 0.00071 12.4 0.1 1 1 4.1e-05 0.0023 10.7 0.0 4 37 301 333 299 341 0.79 # 70511 # 72613 # -1 # ID=1_86;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.567 1_25 - 555 HTH_Tnp_4 PF13613.1 53 0.00036 13.1 0.4 1 1 1.1e-05 0.0012 11.4 0.0 26 44 38 56 35 57 0.90 # 17794 # 19458 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.556 1_21 - 372 DUF3584 PF12128.3 1201 0.076 3.3 61.1 1 1 0.0075 0.83 -0.2 61.1 261 533 79 352 69 366 0.61 # 13786 # 14901 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.584 1_24 - 187 HTH_8 PF02954.14 42 0.00025 13.7 0.1 1 1 5.9e-06 0.00065 12.3 0.1 24 42 164 182 161 182 0.89 # 17250 # 17810 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.565 1_24 - 187 TetR_N PF00440.18 47 0.00046 12.9 0.7 1 2 0.027 3 0.7 0.0 11 21 3 13 1 13 0.83 # 17250 # 17810 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.565 1_24 - 187 TetR_N PF00440.18 47 0.00046 12.9 0.7 2 2 4.2e-05 0.0046 9.7 0.2 17 35 159 177 156 178 0.86 # 17250 # 17810 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.565 1_69 - 1753 AAA_19 PF13245.1 76 4.1e-05 16.4 1.7 1 1 3.1e-06 0.00011 15.0 0.4 7 76 980 1046 973 1046 0.77 # 50966 # 56224 # -1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.614 1_26 - 323 AAA_19 PF13245.1 76 7.1e-05 15.6 0.2 1 1 9.8e-06 0.00036 13.3 0.1 6 37 36 67 32 119 0.75 # 19448 # 20416 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_92 - 72 AAA_19 PF13245.1 76 0.00019 14.3 0.0 1 1 5.8e-06 0.00021 14.1 0.0 15 42 42 68 29 71 0.79 # 74882 # 75097 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.394 1_15 - 402 CbiA PF01656.18 195 2.5e-18 59.2 0.0 1 1 4.6e-20 5.1e-18 58.2 0.0 1 141 111 291 111 328 0.75 # 9549 # 10754 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.468 1_26 - 323 PRK PF00485.13 194 0.00037 13.1 0.0 1 1 7e-06 0.00078 12.1 0.0 1 38 42 81 42 132 0.66 # 19448 # 20416 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_100 - 230 Sigma70_r4_2 PF08281.7 54 8.2e-05 15.1 0.0 1 1 2.9e-06 0.00016 14.2 0.0 18 48 162 191 159 195 0.89 # 79630 # 80319 # -1 # ID=1_100;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.325 1_14 - 325 Sigma70_r4_2 PF08281.7 54 0.00059 12.4 0.0 1 1 3.2e-05 0.0018 10.8 0.0 24 50 158 184 153 185 0.89 # 8575 # 9549 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.447 1_25 - 555 rve PF00665.21 120 1.6e-12 40.7 0.0 1 1 7.7e-14 4.3e-12 39.3 0.0 2 118 157 298 156 300 0.89 # 17794 # 19458 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.556 1_27 - 346 rve PF00665.21 120 1.9e-10 34.0 0.0 1 1 8.1e-12 4.5e-10 32.8 0.0 18 118 206 305 190 307 0.91 # 20605 # 21642 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_27 - 346 Terminase_5 PF06056.7 58 0.00017 14.2 0.0 1 1 6.1e-06 0.00068 12.3 0.0 3 35 30 62 28 85 0.86 # 20605 # 21642 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_2 - 109 AAA_23 PF13476.1 202 0.034 7.5 21.3 1 1 0.00033 0.037 7.4 21.3 135 184 37 82 10 96 0.43 # 605 # 931 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.557 1_9 - 227 Methyltransf_26 PF13659.1 117 3e-09 30.0 0.0 1 2 1.4e-07 1.6e-05 18.0 0.0 60 114 10 71 3 74 0.69 # 4405 # 5085 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.589 1_9 - 227 Methyltransf_26 PF13659.1 117 3e-09 30.0 0.0 2 2 4.5e-05 0.005 10.0 0.0 4 34 167 196 164 221 0.80 # 4405 # 5085 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.589 1_69 - 1753 AAA_30 PF13604.1 196 3.7e-41 133.9 22.1 1 3 0.038 2.1 0.9 0.0 41 86 223 269 218 282 0.84 # 50966 # 56224 # -1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.614 1_69 - 1753 AAA_30 PF13604.1 196 3.7e-41 133.9 22.1 2 3 1.8e-05 0.00099 11.8 1.9 9 133 421 539 419 559 0.79 # 50966 # 56224 # -1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.614 1_69 - 1753 AAA_30 PF13604.1 196 3.7e-41 133.9 22.1 3 3 7.9e-43 4.4e-41 133.6 1.0 1 191 967 1160 967 1163 0.95 # 50966 # 56224 # -1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.614 1_26 - 323 AAA_30 PF13604.1 196 0.00018 14.2 0.3 1 1 9.7e-06 0.00054 12.6 0.3 15 128 38 164 27 170 0.55 # 19448 # 20416 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_14 - 325 CPSase_L_D3 PF02787.14 123 0.00025 13.9 0.6 1 1 6.9e-06 0.00076 12.3 0.1 49 98 134 186 129 191 0.83 # 8575 # 9549 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.447 1_100 - 230 GerE PF00196.14 58 3.9e-05 16.0 0.0 1 1 5.9e-07 6.6e-05 15.3 0.0 14 57 165 208 160 209 0.91 # 79630 # 80319 # -1 # ID=1_100;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.325 1_70 - 745 TraG-D_C PF12696.2 128 1.3e-20 66.6 0.0 1 1 4.4e-22 4.9e-20 64.8 0.0 1 127 419 541 419 542 0.87 # 56224 # 58458 # -1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.544 1_27 - 346 DDE_3 PF13358.1 146 2.1e-29 95.2 0.1 1 1 4.1e-31 4.6e-29 94.1 0.0 2 138 177 310 176 317 0.96 # 20605 # 21642 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_15 - 402 MipZ PF09140.6 261 6.3e-06 18.4 0.0 1 2 0.0025 0.28 3.2 0.0 3 50 111 163 109 201 0.73 # 9549 # 10754 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.468 1_15 - 402 MipZ PF09140.6 261 6.3e-06 18.4 0.0 2 2 2.8e-06 0.00031 12.9 0.0 87 136 233 282 220 305 0.87 # 9549 # 10754 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.468 1_94 - 474 DivIC PF04977.10 80 0.0028 10.2 6.6 1 2 1.7e-05 0.0018 10.8 3.5 17 66 75 123 71 124 0.91 # 75670 # 77091 # -1 # ID=1_94;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.581 1_94 - 474 DivIC PF04977.10 80 0.0028 10.2 6.6 2 2 0.055 6.1 -0.5 0.1 49 64 406 421 401 426 0.81 # 75670 # 77091 # -1 # ID=1_94;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.581 1_90 - 74 zf-dskA_traR PF01258.12 36 2.8e-15 48.9 2.2 1 1 3.5e-17 3.9e-15 48.4 2.2 5 35 36 66 29 72 0.86 # 74014 # 74235 # -1 # ID=1_90;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.486 1_21 - 372 DUF2316 PF10078.4 89 0.018 8.2 9.4 1 2 0.00018 0.02 8.0 2.7 5 45 198 238 193 249 0.88 # 13786 # 14901 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.584 1_21 - 372 DUF2316 PF10078.4 89 0.018 8.2 9.4 2 2 0.008 0.88 2.7 0.6 5 42 251 288 246 300 0.86 # 13786 # 14901 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.584 1_26 - 323 AAA PF00004.24 132 1.7e-06 21.3 0.0 1 1 3.5e-08 3.9e-06 20.2 0.0 3 97 45 152 43 181 0.68 # 19448 # 20416 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_14 - 325 HTH_37 PF13744.1 80 0.00013 14.9 1.1 1 2 0.0091 1 2.4 0.1 27 55 9 37 6 43 0.82 # 8575 # 9549 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.447 1_14 - 325 HTH_37 PF13744.1 80 0.00013 14.9 1.1 2 2 3.2e-05 0.0035 10.2 0.1 27 53 156 182 124 186 0.91 # 8575 # 9549 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.447 1_26 - 323 TIGR00064 TIGR00064 279 7.9e-05 14.7 0.2 1 1 1.4e-06 0.00015 13.7 0.0 72 111 33 72 4 76 0.73 # 19448 # 20416 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_9 - 227 N6_N4_Mtase PF01555.13 231 4e-32 104.6 0.0 1 1 1.8e-31 1.9e-29 95.8 0.0 1 227 21 199 21 203 0.91 # 4405 # 5085 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.589 1_92 - 72 cobW PF02492.14 178 0.00016 14.2 0.0 1 1 1.9e-06 0.00021 13.8 0.0 5 25 42 66 39 71 0.77 # 74882 # 75097 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.394 1_26 - 323 AAA_16 PF13191.1 185 4e-11 36.3 1.2 1 1 1.4e-11 5e-10 32.7 0.3 22 179 38 153 24 162 0.76 # 19448 # 20416 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_70 - 745 AAA_16 PF13191.1 185 0.00017 14.6 0.0 1 1 1.9e-05 0.0007 12.6 0.0 21 55 182 216 179 253 0.85 # 56224 # 58458 # -1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.544 1_92 - 72 AAA_16 PF13191.1 185 0.00026 14.0 0.1 1 1 7.1e-06 0.00026 14.0 0.1 26 51 39 64 19 71 0.85 # 74882 # 75097 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.394 1_26 - 323 AAA_22 PF13401.1 131 5.5e-16 52.0 0.3 1 1 2.2e-17 1.2e-15 50.8 0.3 3 129 39 170 36 172 0.77 # 19448 # 20416 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_92 - 72 AAA_22 PF13401.1 131 0.00042 13.5 0.0 1 2 0.07 3.9 0.7 0.0 106 126 17 37 5 40 0.82 # 74882 # 75097 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.394 1_92 - 72 AAA_22 PF13401.1 131 0.00042 13.5 0.0 2 2 2.8e-05 0.0016 11.7 0.0 6 31 39 64 29 69 0.84 # 74882 # 75097 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.394 1_29 - 298 HTH_1 PF00126.22 60 4.4e-16 51.5 0.0 1 1 1.2e-17 1.3e-15 50.0 0.0 2 60 7 65 6 65 0.96 # 22250 # 23143 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.404 1_27 - 346 LZ_Tnp_IS481 PF13011.1 85 5.3e-06 19.8 0.2 1 1 1.1e-07 1.2e-05 18.6 0.2 12 69 27 82 15 89 0.91 # 20605 # 21642 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_90 - 74 Tnp_zf-ribbon_2 PF13842.1 32 0.00035 14.1 0.8 1 1 5.1e-06 0.00056 13.4 0.8 15 32 33 61 21 61 0.82 # 74014 # 74235 # -1 # ID=1_90;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.486 1_48 - 143 Limkain-b1 PF11608.3 91 0.00062 12.6 0.0 1 1 8.2e-06 0.00091 12.1 0.0 41 74 13 46 7 68 0.89 # 35441 # 35869 # 1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.625 1_27 - 346 HTH_32 PF13565.1 77 1.9e-12 41.0 3.6 1 2 0.0027 0.15 6.0 0.1 32 77 24 61 9 61 0.80 # 20605 # 21642 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_27 - 346 HTH_32 PF13565.1 77 1.9e-12 41.0 3.6 2 2 9.8e-14 5.4e-12 39.5 0.3 1 77 56 136 56 136 0.82 # 20605 # 21642 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_25 - 555 HTH_32 PF13565.1 77 0.00012 15.9 8.9 1 3 0.0033 0.18 5.7 0.1 33 77 11 52 2 52 0.67 # 17794 # 19458 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.556 1_25 - 555 HTH_32 PF13565.1 77 0.00012 15.9 8.9 2 3 0.0011 0.062 7.2 0.1 21 63 61 113 54 120 0.69 # 17794 # 19458 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.556 1_25 - 555 HTH_32 PF13565.1 77 0.00012 15.9 8.9 3 3 0.0055 0.31 5.0 0.1 1 18 131 148 131 160 0.79 # 17794 # 19458 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.556 1_27 - 346 HTH_23 PF13384.1 50 2e-11 36.3 2.8 1 1 1.6e-12 4.4e-11 35.2 0.0 3 50 26 73 24 73 0.94 # 20605 # 21642 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_109 - 379 HTH_23 PF13384.1 50 6.6e-06 18.8 0.0 1 1 7.4e-07 2.1e-05 17.2 0.0 13 45 52 81 49 86 0.88 # 84811 # 85947 # -1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.588 1_24 - 187 HTH_23 PF13384.1 50 1.8e-05 17.4 0.0 1 1 1.6e-06 4.5e-05 16.1 0.0 17 42 158 183 148 186 0.82 # 17250 # 17810 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.565 1_25 - 555 HTH_23 PF13384.1 50 0.0039 10.0 0.1 1 2 0.00014 0.0039 10.0 0.1 20 39 34 53 29 57 0.88 # 17794 # 19458 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.556 1_25 - 555 HTH_23 PF13384.1 50 0.0039 10.0 0.1 2 2 0.0023 0.064 6.1 0.5 32 42 130 140 128 147 0.84 # 17794 # 19458 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.556 1_24 - 187 HTH_7 PF02796.10 45 9.1e-09 28.2 0.2 1 1 5.4e-10 2e-08 27.1 0.2 1 42 140 179 140 181 0.93 # 17250 # 17810 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.565 1_25 - 555 HTH_7 PF02796.10 45 2.9e-05 17.0 0.2 1 1 3e-06 0.00011 15.1 0.2 23 43 33 53 30 54 0.93 # 17794 # 19458 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.556 1_27 - 346 HTH_7 PF02796.10 45 0.00045 13.2 0.2 1 2 0.00021 0.0076 9.2 0.0 15 38 34 57 16 61 0.84 # 20605 # 21642 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_27 - 346 HTH_7 PF02796.10 45 0.00045 13.2 0.2 2 2 0.066 2.4 1.2 0.1 35 43 129 137 119 139 0.79 # 20605 # 21642 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_26 - 323 NB-ARC PF00931.17 287 0.00044 12.2 0.3 1 1 5.9e-06 0.00066 11.6 0.3 8 104 29 126 22 144 0.74 # 19448 # 20416 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_27 - 346 HTH_29 PF13551.1 112 3.1e-19 62.3 0.2 1 1 2e-20 7.5e-19 61.0 0.2 1 111 30 139 30 140 0.92 # 20605 # 21642 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_25 - 555 HTH_29 PF13551.1 112 7.6e-06 19.2 0.5 1 2 3.4e-05 0.0013 12.0 0.1 14 91 33 109 25 121 0.65 # 17794 # 19458 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.556 1_25 - 555 HTH_29 PF13551.1 112 7.6e-06 19.2 0.5 2 2 0.011 0.41 3.9 0.0 25 44 128 147 125 155 0.80 # 17794 # 19458 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.556 1_24 - 187 HTH_29 PF13551.1 112 1.6e-05 18.1 1.1 1 2 0.076 2.8 1.2 0.1 33 61 121 148 104 156 0.71 # 17250 # 17810 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.565 1_24 - 187 HTH_29 PF13551.1 112 1.6e-05 18.1 1.1 2 2 5.3e-06 0.0002 14.6 0.0 10 38 157 184 150 185 0.90 # 17250 # 17810 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.565 1_26 - 323 Arch_ATPase PF01637.13 234 4.1e-05 16.4 0.2 1 1 8.6e-07 9.5e-05 15.2 0.2 8 135 30 142 27 164 0.68 # 19448 # 20416 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_26 - 323 AAA_5 PF07728.9 139 8.9e-05 15.3 0.1 1 1 7e-06 0.00078 12.2 0.2 5 90 46 149 43 152 0.85 # 19448 # 20416 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_26 - 323 ResIII PF04851.10 184 1.1e-05 18.4 0.2 1 2 3.4e-05 0.0019 11.1 0.3 29 101 44 110 20 121 0.72 # 19448 # 20416 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_26 - 323 ResIII PF04851.10 184 1.1e-05 18.4 0.2 2 2 0.0012 0.064 6.1 0.0 131 162 109 140 96 153 0.63 # 19448 # 20416 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_92 - 72 ResIII PF04851.10 184 0.00074 12.4 0.0 1 1 1.6e-05 0.00087 12.2 0.0 6 51 13 63 9 69 0.84 # 74882 # 75097 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.394 1_70 - 745 TrwB_AAD_bind PF10412.4 386 4e-144 473.0 0.0 1 1 1.8e-145 5e-144 472.6 0.0 2 386 172 561 171 561 0.99 # 56224 # 58458 # -1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.544 1_86 - 701 TrwB_AAD_bind PF10412.4 386 3.8e-07 22.0 0.2 1 2 6.9e-08 1.9e-06 19.7 0.0 15 53 297 335 288 370 0.81 # 70511 # 72613 # -1 # ID=1_86;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.567 1_86 - 701 TrwB_AAD_bind PF10412.4 386 3.8e-07 22.0 0.2 2 2 0.095 2.6 -0.5 0.0 261 317 531 587 525 590 0.92 # 70511 # 72613 # -1 # ID=1_86;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.567 1_26 - 323 TrwB_AAD_bind PF10412.4 386 0.00016 13.4 0.5 1 2 6.6e-05 0.0018 9.9 0.0 14 44 39 69 35 76 0.83 # 19448 # 20416 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_26 - 323 TrwB_AAD_bind PF10412.4 386 0.00016 13.4 0.5 2 2 0.085 2.3 -0.3 0.0 234 275 115 158 112 169 0.78 # 19448 # 20416 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_92 - 72 TrwB_AAD_bind PF10412.4 386 0.0011 10.6 0.0 1 1 5.7e-05 0.0016 10.1 0.0 15 44 37 66 26 69 0.84 # 74882 # 75097 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.394 1_26 - 323 AAA_18 PF13238.1 129 0.0001 15.7 0.0 1 1 1.7e-06 0.00019 14.8 0.0 1 23 43 90 43 138 0.67 # 19448 # 20416 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_13 - 425 IMS_HHH PF11798.3 32 3.7e-08 26.2 0.1 1 1 7.8e-10 8.7e-08 25.0 0.1 5 32 174 201 169 201 0.89 # 7219 # 8493 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.540 1_20 - 170 TIGR01406 TIGR01406 231 0.00037 12.9 0.0 1 1 5e-06 0.00056 12.3 0.0 3 59 106 156 105 159 0.81 # 13284 # 13793 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.592 1_86 - 701 DUF87 PF01935.12 229 9e-08 25.2 0.0 1 1 7.4e-09 4.1e-07 23.1 0.0 26 221 300 486 286 494 0.75 # 70511 # 72613 # -1 # ID=1_86;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.567 1_26 - 323 DUF87 PF01935.12 229 0.00066 12.6 0.2 1 1 0.0001 0.0058 9.5 0.0 26 52 43 69 40 73 0.85 # 19448 # 20416 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_27 - 346 HTH_28 PF13518.1 52 1.1e-09 31.3 0.1 1 1 2.1e-10 7.9e-09 28.5 0.0 1 50 29 79 29 82 0.91 # 20605 # 21642 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_24 - 187 HTH_28 PF13518.1 52 3.7e-06 20.0 0.9 1 1 1.7e-07 6.1e-06 19.3 0.1 7 38 152 184 148 185 0.88 # 17250 # 17810 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.565 1_25 - 555 HTH_28 PF13518.1 52 0.002 11.2 0.0 1 2 5.4e-05 0.002 11.2 0.0 15 35 34 54 32 64 0.90 # 17794 # 19458 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.556 1_25 - 555 HTH_28 PF13518.1 52 0.002 11.2 0.0 2 2 0.037 1.4 2.2 0.4 26 37 129 140 125 145 0.87 # 17794 # 19458 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.556 1_26 - 323 TIGR00041 TIGR00041 196 0.00037 13.0 0.0 1 1 5.7e-06 0.00063 12.2 0.0 2 54 38 96 37 122 0.74 # 19448 # 20416 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_14 - 325 HTH_24 PF13412.1 48 3.1e-05 16.4 0.5 1 1 1.3e-06 0.00014 14.3 0.0 13 39 157 182 153 184 0.84 # 8575 # 9549 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.447 1_27 - 346 HTH_33 PF13592.1 60 6.5e-10 31.5 0.3 1 1 2.4e-11 2.6e-09 29.6 0.3 3 50 108 155 107 157 0.94 # 20605 # 21642 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_26 - 323 DUF2075 PF09848.4 352 2e-06 20.0 0.1 1 1 5.2e-08 2.9e-06 19.5 0.1 2 97 41 138 40 165 0.71 # 19448 # 20416 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_92 - 72 DUF2075 PF09848.4 352 2.6e-05 16.3 0.0 1 1 5.4e-07 3e-05 16.1 0.0 4 30 40 66 37 71 0.78 # 74882 # 75097 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.394 1_69 - 1753 UvrD_C_2 PF13538.1 104 3.2e-07 23.5 0.3 1 1 3.5e-08 3.9e-06 20.1 0.1 3 102 1337 1440 1335 1442 0.78 # 50966 # 56224 # -1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.614 1_36 - 117 HTH_OrfB_IS605 PF12323.3 46 9.1e-19 59.7 0.0 1 1 1.3e-20 1.4e-18 59.0 0.0 1 45 1 45 1 46 0.98 # 28907 # 29257 # 1 # ID=1_36;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 1_26 - 323 T2SE PF00437.15 272 3e-06 19.3 0.7 1 1 1.3e-07 1.5e-05 17.1 0.7 110 161 22 72 6 137 0.81 # 19448 # 20416 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_26 - 323 NACHT PF05729.7 166 0.00053 12.7 0.2 1 1 1.1e-05 0.0013 11.5 0.2 1 28 41 68 41 140 0.77 # 19448 # 20416 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_26 - 323 UPF0079 PF02367.12 123 0.00013 14.7 0.0 1 1 2.2e-06 0.00024 13.8 0.0 3 45 28 70 26 114 0.84 # 19448 # 20416 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_26 - 323 AAA_17 PF13207.1 121 0.00016 15.5 0.1 1 1 3.4e-06 0.00038 14.4 0.0 1 40 42 89 42 186 0.63 # 19448 # 20416 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_26 - 323 TIGR02211 TIGR02211 221 0.00051 12.3 0.0 1 1 7.3e-06 0.00082 11.7 0.0 11 51 20 60 12 86 0.88 # 19448 # 20416 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_92 - 72 Viral_helicase1 PF01443.13 234 0.00068 12.2 0.1 1 1 8.5e-06 0.00095 11.7 0.1 3 29 42 66 40 70 0.83 # 74882 # 75097 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.394 1_86 - 701 Pox_A32 PF04665.7 241 0.0009 11.6 0.0 1 1 1.8e-05 0.002 10.5 0.0 7 38 291 322 287 337 0.85 # 70511 # 72613 # -1 # ID=1_86;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.567 1_26 - 323 AAA_14 PF13173.1 128 4.5e-06 19.6 0.0 1 1 3.5e-07 1.9e-05 17.6 0.0 2 96 40 164 39 193 0.62 # 19448 # 20416 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_92 - 72 AAA_14 PF13173.1 128 0.00092 12.2 0.1 1 1 5e-05 0.0028 10.7 0.0 6 28 41 63 36 69 0.84 # 74882 # 75097 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.394 1_27 - 346 HTH_Tnp_ISL3 PF13542.1 52 0.00027 13.2 0.4 1 1 2.3e-05 0.0013 11.0 0.4 18 49 30 62 26 62 0.79 # 20605 # 21642 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_25 - 555 HTH_Tnp_ISL3 PF13542.1 52 0.00041 12.6 0.0 1 1 2.7e-05 0.0015 10.8 0.0 30 49 34 53 32 55 0.90 # 17794 # 19458 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.556 1_26 - 323 AAA_33 PF13671.1 143 0.00018 14.5 0.0 1 1 3.7e-06 0.00041 13.3 0.0 1 45 42 100 42 132 0.60 # 19448 # 20416 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_92 - 72 ArgK PF03308.11 267 3.6e-05 15.7 0.0 1 1 3.4e-07 3.7e-05 15.6 0.0 25 59 33 67 17 70 0.82 # 74882 # 75097 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.394 1_70 - 745 T4SS-DNA_transf PF02534.9 469 5.6e-12 37.9 0.0 1 1 2.4e-13 1.3e-11 36.7 0.0 283 391 398 505 378 542 0.81 # 56224 # 58458 # -1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.544 1_86 - 701 T4SS-DNA_transf PF02534.9 469 0.00011 13.9 0.0 1 2 0.0014 0.076 4.5 0.0 105 185 351 425 288 441 0.85 # 70511 # 72613 # -1 # ID=1_86;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.567 1_86 - 701 T4SS-DNA_transf PF02534.9 469 0.00011 13.9 0.0 2 2 0.00024 0.014 7.0 0.0 321 378 531 587 483 589 0.93 # 70511 # 72613 # -1 # ID=1_86;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.567 1_27 - 346 HTH_17 PF12728.2 51 0.00015 15.1 0.3 1 2 4.3e-05 0.0048 10.3 0.0 2 45 41 90 40 92 0.87 # 20605 # 21642 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_27 - 346 HTH_17 PF12728.2 51 0.00015 15.1 0.3 2 2 0.034 3.7 1.0 0.0 13 25 127 139 122 147 0.86 # 20605 # 21642 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_90 - 74 Zn-ribbon_8 PF09723.5 42 5.9e-05 16.1 0.6 1 1 1e-06 0.00011 15.2 0.6 6 39 35 67 34 69 0.78 # 74014 # 74235 # -1 # ID=1_90;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.486 1_111 - 71 tRNA_anti-codon PF01336.20 75 0.00039 13.3 0.1 1 1 4.1e-06 0.00045 13.2 0.1 30 61 9 47 2 60 0.79 # 86402 # 86614 # -1 # ID=1_111;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.531 1_26 - 323 PIF1 PF05970.9 364 3.2e-05 16.0 0.0 1 1 6.3e-07 7e-05 14.9 0.0 7 127 27 149 23 167 0.68 # 19448 # 20416 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_24 - 187 TrmB PF01978.14 68 0.00011 14.9 0.0 1 1 2.1e-06 0.00023 13.9 0.0 21 45 157 181 150 184 0.90 # 17250 # 17810 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.565 1_20 - 170 RNase_T PF00929.19 164 4.9e-07 23.2 0.0 1 1 6.3e-09 7e-07 22.7 0.0 1 55 106 152 106 158 0.89 # 13284 # 13793 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.592 1_86 - 701 AAA_10 PF12846.2 304 1e-49 162.6 0.0 1 1 5.6e-51 1.6e-49 162.0 0.0 1 294 297 586 297 592 0.87 # 70511 # 72613 # -1 # ID=1_86;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.567 1_70 - 745 AAA_10 PF12846.2 304 8.3e-07 21.7 0.0 1 2 0.0055 0.15 4.4 0.0 3 43 187 227 186 239 0.93 # 56224 # 58458 # -1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.544 1_70 - 745 AAA_10 PF12846.2 304 8.3e-07 21.7 0.0 2 2 4.5e-06 0.00013 14.5 0.0 200 295 397 493 279 498 0.83 # 56224 # 58458 # -1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.544 1_26 - 323 AAA_10 PF12846.2 304 1.1e-06 21.3 0.1 1 2 1.7e-05 0.00046 12.7 0.0 3 34 42 73 40 106 0.73 # 19448 # 20416 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_26 - 323 AAA_10 PF12846.2 304 1.1e-06 21.3 0.1 2 2 0.0025 0.071 5.5 0.0 216 245 120 150 79 207 0.83 # 19448 # 20416 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_92 - 72 AAA_10 PF12846.2 304 0.00045 12.7 0.1 1 2 0.0022 0.061 5.7 0.0 269 286 12 33 2 37 0.75 # 74882 # 75097 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.394 1_92 - 72 AAA_10 PF12846.2 304 0.00045 12.7 0.1 2 2 0.0022 0.06 5.7 0.0 2 29 38 65 37 69 0.87 # 74882 # 75097 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.394 1_15 - 402 AAA_31 PF13614.1 157 0.0005 13.1 0.1 1 2 0.071 7.9 -0.6 0.0 12 61 120 174 110 209 0.55 # 9549 # 10754 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.468 1_15 - 402 AAA_31 PF13614.1 157 0.0005 13.1 0.1 2 2 3.1e-05 0.0035 10.3 0.0 108 147 235 273 231 279 0.86 # 9549 # 10754 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.468 1_52 - 71 FaeA PF04703.7 62 7.3e-22 70.4 0.0 1 1 8.7e-24 9.7e-22 70.0 0.0 3 60 7 69 5 70 0.92 # 37735 # 37947 # -1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.521 1_13 - 425 DNA_pol_lambd_f PF10391.4 52 0.00035 13.2 0.0 1 1 1e-05 0.0011 11.5 0.0 5 29 183 207 179 218 0.85 # 7219 # 8493 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.540 1_92 - 72 AAA_11 PF13086.1 236 0.00053 12.6 0.0 1 1 9.5e-06 0.00053 12.6 0.0 20 43 40 63 14 71 0.76 # 74882 # 75097 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.394 1_2 - 109 AAA_11 PF13086.1 236 0.075 5.6 15.3 1 1 0.0014 0.077 5.5 15.3 98 159 34 96 17 108 0.46 # 605 # 931 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.557 1_111 - 71 SSB PF00436.20 104 2.3e-25 81.6 0.5 1 1 4.8e-27 2.6e-25 81.4 0.5 44 99 2 57 1 60 0.97 # 86402 # 86614 # -1 # ID=1_111;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.531 1_1 - 36 SSB PF00436.20 104 8.3e-12 38.0 0.0 1 1 1.6e-13 8.9e-12 37.9 0.0 1 31 6 36 6 36 0.98 # 3 # 110 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.574 1_17 - 314 Glyco_trans_4_3 PF12000.3 171 1.5e-05 17.7 0.1 1 2 0.00077 0.085 5.5 0.0 14 84 112 182 97 188 0.79 # 11169 # 12110 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.538 1_17 - 314 Glyco_trans_4_3 PF12000.3 171 1.5e-05 17.7 0.1 2 2 3.4e-05 0.0038 9.9 0.0 19 65 209 256 201 261 0.90 # 11169 # 12110 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.538 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/a80b2611-82e3-4769-8442-6d6c7c7f9dfa # Target file: checkm_output/bins/pm343/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm343/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/a80b2611-82e3-4769-8442-6d6c7c7f9dfa checkm_output/bins/pm343/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:03:20 2017 # [ok]