# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 2_13 - 228 Cons_hypoth95 PF03602.10 183 5.5e-06 18.4 0.0 1 2 0.00022 0.017 7.0 0.0 112 146 18 54 2 82 0.64 # 11049 # 11732 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.577 2_13 - 228 Cons_hypoth95 PF03602.10 183 5.5e-06 18.4 0.0 2 2 3.9e-05 0.0031 9.5 0.0 41 62 162 183 145 219 0.78 # 11049 # 11732 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.577 2_3 - 92 Zn_Tnp_IS1 PF03811.8 36 6.3e-24 75.8 4.5 1 1 1.6e-25 1.2e-23 74.9 4.5 1 36 1 36 1 36 0.99 # 1594 # 1869 # 1 # ID=2_3;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.533 2_13 - 228 TIGR00095 TIGR00095 194 0.00011 14.1 0.0 1 2 0.00068 0.053 5.4 0.0 124 138 20 34 2 79 0.71 # 11049 # 11732 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.577 2_13 - 228 TIGR00095 TIGR00095 194 0.00011 14.1 0.0 2 2 0.00024 0.019 6.8 0.0 53 86 164 199 155 218 0.77 # 11049 # 11732 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.577 2_25 - 188 N6_Mtase PF02384.11 311 0.00012 13.8 0.0 1 2 2.1e-05 0.0016 10.0 0.0 28 62 32 66 21 75 0.89 # 17441 # 18004 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 2_25 - 188 N6_Mtase PF02384.11 311 0.00012 13.8 0.0 2 2 0.014 1.1 0.8 0.0 127 137 114 124 102 134 0.82 # 17441 # 18004 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 1_23 - 154 Sigma54_activat PF00158.21 168 0.00013 14.0 0.0 1 2 1.3e-05 0.001 11.1 0.0 16 62 7 54 1 61 0.79 # 23712 # 24173 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.370 1_23 - 154 Sigma54_activat PF00158.21 168 0.00013 14.0 0.0 2 2 0.018 1.4 0.9 0.0 94 120 71 97 65 107 0.81 # 23712 # 24173 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.370 1_31 - 104 FtsK_SpoIIIE PF01580.13 205 1.1e-06 20.8 0.0 1 1 3.5e-08 1.4e-06 20.5 0.0 9 66 39 98 32 101 0.80 # 30102 # 30413 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.436 1_27 - 876 FtsK_SpoIIIE PF01580.13 205 8.2e-06 17.9 0.1 1 2 4.1e-06 0.00016 13.7 0.0 39 63 476 504 463 507 0.84 # 26200 # 28827 # -1 # ID=1_27;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.544 1_27 - 876 FtsK_SpoIIIE PF01580.13 205 8.2e-06 17.9 0.1 2 2 0.021 0.84 1.6 0.0 75 166 530 625 529 637 0.80 # 26200 # 28827 # -1 # ID=1_27;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.544 1_39 - 230 HTH_38 PF13936.1 44 0.00049 12.3 0.0 1 1 1.9e-05 0.0015 10.7 0.0 15 36 164 185 157 185 0.90 # 34920 # 35609 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.342 1_27 - 876 MobB PF03205.9 140 0.0002 13.7 0.2 1 2 2.7e-05 0.0021 10.3 0.0 4 37 483 515 481 523 0.79 # 26200 # 28827 # -1 # ID=1_27;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.544 1_27 - 876 MobB PF03205.9 140 0.0002 13.7 0.2 2 2 0.034 2.7 0.3 0.0 25 64 695 732 690 744 0.86 # 26200 # 28827 # -1 # ID=1_27;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.544 1_8 - 1757 AAA_19 PF13245.1 76 7.4e-08 24.7 1.4 1 1 4.5e-09 3.5e-07 22.5 0.3 7 76 981 1047 974 1047 0.74 # 4965 # 10235 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.598 2_13 - 228 MethyltransfD12 PF02086.10 260 0.00045 12.2 0.0 1 2 0.023 1.8 0.4 0.0 178 188 21 31 13 86 0.85 # 11049 # 11732 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.577 2_13 - 228 MethyltransfD12 PF02086.10 260 0.00045 12.2 0.0 2 2 4e-05 0.0031 9.5 0.0 20 46 163 189 148 197 0.78 # 11049 # 11732 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.577 1_39 - 230 Sigma70_r4_2 PF08281.7 54 0.00021 13.3 0.0 1 1 5.4e-06 0.00042 12.4 0.0 26 48 169 191 159 194 0.84 # 34920 # 35609 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.342 2_25 - 188 Methyltransf_26 PF13659.1 117 7.2e-14 44.4 0.1 1 1 3.3e-15 1.3e-13 43.6 0.1 2 114 52 147 51 150 0.90 # 17441 # 18004 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 2_13 - 228 Methyltransf_26 PF13659.1 117 1.2e-13 43.8 0.1 1 2 6.9e-09 2.7e-07 23.2 0.0 53 114 3 71 2 74 0.78 # 11049 # 11732 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.577 2_13 - 228 Methyltransf_26 PF13659.1 117 1.2e-13 43.8 0.1 2 2 2e-07 8e-06 18.5 0.0 4 44 167 206 164 222 0.82 # 11049 # 11732 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.577 1_31 - 104 Zeta_toxin PF06414.7 201 0.00094 10.8 0.0 1 1 1.5e-05 0.0012 10.5 0.0 14 40 68 94 58 103 0.80 # 30102 # 30413 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.436 1_8 - 1757 AAA_30 PF13604.1 196 2.3e-44 143.9 14.3 1 3 0.083 3.2 -0.2 0.0 41 86 223 269 219 281 0.81 # 4965 # 10235 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.598 1_8 - 1757 AAA_30 PF13604.1 196 2.3e-44 143.9 14.3 2 3 1.3e-05 0.00051 12.2 4.1 7 147 420 552 416 562 0.82 # 4965 # 10235 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.598 1_8 - 1757 AAA_30 PF13604.1 196 2.3e-44 143.9 14.3 3 3 2.1e-43 8e-42 135.6 1.1 1 186 968 1156 968 1162 0.94 # 4965 # 10235 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.598 1_9 - 739 AAA_30 PF13604.1 196 0.00047 12.3 0.0 1 1 2.6e-05 0.001 11.2 0.0 21 57 188 224 180 230 0.85 # 10235 # 12451 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.531 1_39 - 230 GerE PF00196.14 58 1.1e-05 17.3 0.1 1 1 3.5e-07 2.7e-05 16.0 0.0 14 57 165 208 160 209 0.90 # 34920 # 35609 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.342 1_9 - 739 TraG-D_C PF12696.2 128 6.1e-21 67.2 0.0 1 1 1.4e-22 1.1e-20 66.4 0.0 1 127 419 541 419 542 0.86 # 10235 # 12451 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.531 2_13 - 228 UPF0020 PF01170.13 180 3e-06 19.5 0.0 1 2 8.1e-05 0.0064 8.6 0.0 102 123 16 37 2 89 0.68 # 11049 # 11732 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.577 2_13 - 228 UPF0020 PF01170.13 180 3e-06 19.5 0.0 2 2 6.3e-05 0.0049 9.0 0.0 28 54 163 189 158 220 0.67 # 11049 # 11732 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.577 1_33 - 476 DivIC PF04977.10 80 0.00069 11.7 4.6 1 1 1.8e-05 0.0014 10.7 4.6 17 66 76 124 72 125 0.92 # 30978 # 32405 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.574 3_4 - 653 KorB PF08535.5 93 1.5e-05 17.7 0.0 1 1 5.3e-07 4.2e-05 16.3 0.0 2 43 152 193 151 218 0.92 # 2075 # 4033 # -1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.588 1_37 - 120 CTP_transf_2 PF01467.21 157 0.00074 12.1 0.0 1 1 1.1e-05 0.00084 12.0 0.0 32 64 7 38 2 93 0.70 # 34034 # 34393 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.497 2_13 - 228 N6_N4_Mtase PF01555.13 231 5.8e-37 119.9 0.0 1 1 3.3e-36 2.6e-34 111.2 0.0 1 228 21 200 21 203 0.89 # 11049 # 11732 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.577 2_12 - 321 Hydantoinase_A PF01968.13 290 1.2e-08 26.9 0.2 1 3 0.062 4.8 -1.3 0.0 154 175 130 151 109 155 0.77 # 9570 # 10532 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.393 2_12 - 321 Hydantoinase_A PF01968.13 290 1.2e-08 26.9 0.2 2 3 3.2e-06 0.00025 12.7 0.0 68 97 156 183 149 192 0.81 # 9570 # 10532 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.393 2_12 - 321 Hydantoinase_A PF01968.13 290 1.2e-08 26.9 0.2 3 3 8.3e-06 0.00064 11.4 0.0 214 265 242 297 198 307 0.78 # 9570 # 10532 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.393 1_9 - 739 AAA_16 PF13191.1 185 3.5e-06 19.6 0.0 1 1 4.1e-07 1.6e-05 17.5 0.0 21 60 182 222 179 263 0.81 # 10235 # 12451 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.531 1_31 - 104 AAA_16 PF13191.1 185 0.00018 14.0 0.1 1 1 9.1e-06 0.00035 13.1 0.0 22 51 68 97 60 102 0.91 # 30102 # 30413 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.436 2_1 - 88 AAA_22 PF13401.1 131 0.00051 12.8 0.1 1 1 2.9e-05 0.00076 12.2 0.0 17 67 31 85 23 87 0.83 # 991 # 1254 # 1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.515 1_23 - 154 AAA_22 PF13401.1 131 0.0006 12.5 0.1 1 1 5e-05 0.0013 11.4 0.1 7 94 16 109 13 119 0.75 # 23712 # 24173 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.370 1_31 - 104 AAA_22 PF13401.1 131 0.00061 12.5 0.0 1 1 4.4e-05 0.0011 11.6 0.0 3 27 69 93 64 101 0.86 # 30102 # 30413 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.436 1_23 - 154 AAA_29 PF13555.1 62 0.00067 11.8 0.0 1 1 1.5e-05 0.0012 11.0 0.0 17 40 8 30 1 35 0.79 # 23712 # 24173 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.370 3_4 - 653 HTH_23 PF13384.1 50 5.1e-07 21.8 0.0 1 1 1.4e-07 5.6e-06 18.5 0.0 13 40 149 176 143 180 0.91 # 2075 # 4033 # -1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.588 2_3 - 92 HTH_23 PF13384.1 50 1.7e-05 17.0 0.0 1 1 7.2e-07 2.8e-05 16.3 0.0 7 40 53 86 51 90 0.93 # 1594 # 1869 # 1 # ID=2_3;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.533 1_39 - 230 HTH_7 PF02796.10 45 4.8e-06 19.0 0.1 1 1 1.5e-07 1.2e-05 17.7 0.1 11 37 159 185 128 188 0.87 # 34920 # 35609 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.342 2_3 - 92 zinc_ribbon_4 PF13717.1 36 4.4e-05 15.7 4.1 1 1 1.6e-06 0.00012 14.3 4.1 3 35 6 39 5 40 0.86 # 1594 # 1869 # 1 # ID=2_3;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.533 3_4 - 653 HTH_29 PF13551.1 112 0.00013 14.7 0.2 1 1 7.1e-06 0.00055 12.7 0.0 4 39 145 180 142 236 0.76 # 2075 # 4033 # -1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.588 2_25 - 188 Methyltransf_31 PF13847.1 152 1.2e-06 20.7 0.0 1 1 1.9e-08 1.5e-06 20.4 0.0 5 119 52 162 48 183 0.83 # 17441 # 18004 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 1_23 - 154 Arch_ATPase PF01637.13 234 7.5e-05 15.0 0.4 1 1 1.7e-06 0.00013 14.2 0.4 23 125 16 109 7 119 0.69 # 23712 # 24173 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.370 1_9 - 739 TrwB_AAD_bind PF10412.4 386 1.8e-150 493.3 0.0 1 1 8.4e-152 2.2e-150 493.1 0.0 2 386 172 561 171 561 0.99 # 10235 # 12451 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.531 1_27 - 876 TrwB_AAD_bind PF10412.4 386 3.2e-07 21.8 0.1 1 2 7.2e-08 1.9e-06 19.2 0.0 15 53 479 517 470 547 0.80 # 26200 # 28827 # -1 # ID=1_27;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.544 1_27 - 876 TrwB_AAD_bind PF10412.4 386 3.2e-07 21.8 0.1 2 2 0.061 1.6 -0.3 0.0 261 317 713 769 685 772 0.92 # 26200 # 28827 # -1 # ID=1_27;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.544 1_31 - 104 TrwB_AAD_bind PF10412.4 386 7.9e-05 13.9 0.0 1 2 0.037 0.95 0.5 0.0 294 335 22 63 15 68 0.79 # 30102 # 30413 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.436 1_31 - 104 TrwB_AAD_bind PF10412.4 386 7.9e-05 13.9 0.0 2 2 8.4e-06 0.00022 12.4 0.0 5 43 60 98 56 102 0.86 # 30102 # 30413 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.436 1_23 - 154 GvpD PF07088.6 484 0.00015 12.7 0.0 1 2 0.052 4 -1.9 0.0 11 26 14 29 9 44 0.75 # 23712 # 24173 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.370 1_23 - 154 GvpD PF07088.6 484 0.00015 12.7 0.0 2 2 4.8e-06 0.00037 11.4 0.0 138 181 92 134 82 143 0.86 # 23712 # 24173 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.370 2_13 - 228 Methyltransf_15 PF09445.5 164 0.00022 13.4 0.0 1 2 0.012 0.97 1.5 0.0 53 80 4 30 2 34 0.91 # 11049 # 11732 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.577 2_13 - 228 Methyltransf_15 PF09445.5 164 0.00022 13.4 0.0 2 2 4.3e-05 0.0034 9.5 0.0 3 31 166 194 164 208 0.86 # 11049 # 11732 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.577 2_25 - 188 Methyltransf_12 PF08242.7 99 1.3e-05 18.3 0.0 1 1 2.9e-07 2.2e-05 17.5 0.0 1 99 55 144 55 144 0.83 # 17441 # 18004 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 2_3 - 92 HTH_Tnp_IS1 PF12759.2 46 1.6e-31 100.1 0.2 1 1 3.2e-33 2.5e-31 99.5 0.2 1 46 43 88 43 88 0.99 # 1594 # 1869 # 1 # ID=2_3;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.533 2_25 - 188 Methyltrans_SAM PF10672.4 286 0.00068 11.0 0.0 1 1 1.2e-05 0.00095 10.6 0.0 196 261 113 173 99 180 0.79 # 17441 # 18004 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 1_27 - 876 DUF87 PF01935.12 229 1.7e-07 23.8 0.0 1 1 1.2e-08 4.8e-07 22.3 0.0 26 222 482 669 468 676 0.76 # 26200 # 28827 # -1 # ID=1_27;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.544 1_31 - 104 DUF87 PF01935.12 229 0.0003 13.2 0.0 1 1 1.1e-05 0.00043 12.7 0.0 25 50 72 97 70 102 0.89 # 30102 # 30413 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.436 2_3 - 92 HTH_28 PF13518.1 52 6.9e-05 15.4 0.0 1 1 1.3e-06 0.0001 14.8 0.0 4 35 55 86 53 90 0.90 # 1594 # 1869 # 1 # ID=2_3;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.533 1_23 - 154 Sigma54_activ_2 PF14532.1 138 0.0001 15.0 0.0 1 1 2e-06 0.00016 14.3 0.0 55 109 54 110 3 122 0.68 # 23712 # 24173 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.370 2_25 - 188 TIGR03533 TIGR03533 284 0.00045 11.8 0.0 1 1 9.3e-06 0.00073 11.1 0.0 116 210 45 133 37 141 0.86 # 17441 # 18004 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 2_25 - 188 TIGR03534 TIGR03534 253 1.8e-07 23.1 0.0 1 1 5.3e-09 2.1e-07 22.9 0.0 81 175 45 131 11 148 0.85 # 17441 # 18004 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 2_13 - 228 TIGR03534 TIGR03534 253 0.00096 10.9 0.0 1 1 0.00017 0.0065 8.1 0.0 141 237 3 90 1 96 0.66 # 11049 # 11732 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.577 1_23 - 154 MMR_HSR1 PF01926.18 116 2e-05 17.1 0.0 1 1 3.2e-07 2.5e-05 16.8 0.0 2 90 16 111 15 140 0.69 # 23712 # 24173 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.370 1_8 - 1757 UvrD_C_2 PF13538.1 104 1.2e-07 24.4 0.7 1 2 0.013 1 2.2 0.0 6 44 1227 1265 1223 1295 0.74 # 4965 # 10235 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.598 1_8 - 1757 UvrD_C_2 PF13538.1 104 1.2e-07 24.4 0.7 2 2 5.2e-08 4.1e-06 19.5 0.2 3 102 1341 1444 1339 1446 0.77 # 4965 # 10235 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.598 2_25 - 188 TIGR00755 TIGR00755 256 3.2e-09 28.6 0.0 1 1 5.6e-11 4.3e-09 28.2 0.0 8 105 29 123 25 134 0.90 # 17441 # 18004 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 1_2 - 87 Rad60-SLD PF11976.3 72 8.3e-05 14.8 0.1 1 1 1.5e-06 0.00012 14.3 0.1 12 39 41 68 33 77 0.83 # 1150 # 1410 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.418 1_31 - 104 T2SE PF00437.15 272 0.0005 11.5 0.0 1 1 1.2e-05 0.00095 10.6 0.0 111 155 56 97 39 102 0.76 # 30102 # 30413 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.436 2_12 - 321 StbA PF06406.6 318 6.3e-157 513.9 1.5 1 1 9e-159 7e-157 513.8 1.5 1 317 1 317 1 318 0.99 # 9570 # 10532 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.393 2_12 - 321 YbaB_DNA_bd PF02575.11 93 0.00046 12.7 0.1 1 3 0.038 2.9 0.5 0.0 33 63 129 160 112 160 0.80 # 9570 # 10532 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.393 2_12 - 321 YbaB_DNA_bd PF02575.11 93 0.00046 12.7 0.1 2 3 0.028 2.2 0.9 0.0 63 78 201 216 195 223 0.84 # 9570 # 10532 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.393 2_12 - 321 YbaB_DNA_bd PF02575.11 93 0.00046 12.7 0.1 3 3 0.00045 0.035 6.6 0.0 63 87 247 271 235 276 0.84 # 9570 # 10532 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.393 1_9 - 739 AAA_17 PF13207.1 121 0.00025 14.4 0.0 1 1 8.7e-06 0.00068 13.0 0.0 3 28 189 218 187 303 0.70 # 10235 # 12451 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.531 1_8 - 1757 Viral_helicase1 PF01443.13 234 0.00057 12.0 0.1 1 2 0.00033 0.026 6.5 0.0 1 23 988 1011 988 1188 0.79 # 4965 # 10235 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.598 1_8 - 1757 Viral_helicase1 PF01443.13 234 0.00057 12.0 0.1 2 2 0.0062 0.48 2.4 0.0 171 234 1387 1447 1336 1447 0.63 # 4965 # 10235 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.598 1_31 - 104 Pox_A32 PF04665.7 241 0.00013 13.8 0.0 1 2 0.034 1.3 0.7 0.0 2 28 39 64 38 69 0.76 # 30102 # 30413 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.436 1_31 - 104 Pox_A32 PF04665.7 241 0.00013 13.8 0.0 2 2 1.4e-05 0.00056 11.8 0.0 8 42 65 99 58 101 0.90 # 30102 # 30413 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.436 1_27 - 876 Pox_A32 PF04665.7 241 0.00066 11.5 0.0 1 1 4.6e-05 0.0018 10.1 0.0 7 38 473 504 469 519 0.85 # 26200 # 28827 # -1 # ID=1_27;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.544 1_23 - 154 AAA_14 PF13173.1 128 6e-06 18.8 0.1 1 1 9.5e-08 7.4e-06 18.5 0.1 5 87 16 97 13 135 0.69 # 23712 # 24173 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.370 1_9 - 739 T4SS-DNA_transf PF02534.9 469 5.8e-10 30.8 0.0 1 1 4e-11 1.6e-09 29.3 0.0 264 361 382 476 198 500 0.83 # 10235 # 12451 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.531 1_27 - 876 T4SS-DNA_transf PF02534.9 469 4.5e-05 14.7 0.0 1 2 0.00085 0.033 5.2 0.0 105 185 533 607 470 623 0.86 # 26200 # 28827 # -1 # ID=1_27;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.544 1_27 - 876 T4SS-DNA_transf PF02534.9 469 4.5e-05 14.7 0.0 2 2 0.00022 0.0085 7.2 0.0 319 378 711 769 663 771 0.90 # 26200 # 28827 # -1 # ID=1_27;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.544 2_25 - 188 MTS PF05175.9 170 9e-09 27.5 0.0 1 1 1.6e-10 1.2e-08 27.0 0.0 31 141 50 149 41 166 0.84 # 17441 # 18004 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 1_31 - 104 RNA_helicase PF00910.17 107 0.00015 14.5 0.0 1 1 4.1e-06 0.00032 13.5 0.0 1 29 73 101 73 103 0.91 # 30102 # 30413 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.436 2_25 - 188 Methyltransf_23 PF13489.1 161 4.6e-05 15.7 0.0 1 1 7.6e-07 5.9e-05 15.4 0.0 9 120 38 153 27 174 0.78 # 17441 # 18004 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 1_31 - 104 TIGR01039 TIGR01039 462 0.00054 11.0 0.0 1 1 7e-06 0.00054 11.0 0.0 138 172 64 98 6 101 0.74 # 30102 # 30413 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.436 2_3 - 92 zinc_ribbon_5 PF13719.1 37 8.9e-06 17.9 2.9 1 1 3.2e-07 2.5e-05 16.4 2.9 3 36 6 40 5 41 0.83 # 1594 # 1869 # 1 # ID=2_3;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.533 2_3 - 92 Zn_Tnp_IS1595 PF12760.2 46 0.00013 14.3 2.3 1 1 3.4e-06 0.00027 13.4 2.3 21 46 8 38 5 38 0.74 # 1594 # 1869 # 1 # ID=2_3;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.533 1_27 - 876 AAA_10 PF12846.2 304 1.6e-49 161.4 0.0 1 1 1.1e-50 2.8e-49 160.7 0.0 1 294 479 768 479 774 0.89 # 26200 # 28827 # -1 # ID=1_27;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.544 1_9 - 739 AAA_10 PF12846.2 304 1.1e-10 34.0 0.0 1 1 7.5e-11 1.9e-09 29.8 0.0 3 296 187 494 186 500 0.69 # 10235 # 12451 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.531 1_31 - 104 AAA_10 PF12846.2 304 1.1e-05 17.5 0.0 1 2 0.0061 0.16 3.9 0.0 273 290 23 40 8 52 0.80 # 30102 # 30413 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.436 1_31 - 104 AAA_10 PF12846.2 304 1.1e-05 17.5 0.0 2 2 2.2e-05 0.00056 11.9 0.0 2 24 71 93 70 98 0.87 # 30102 # 30413 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.436 2_25 - 188 RrnaAD PF00398.15 262 2.5e-09 29.0 0.0 1 1 4.1e-11 3.2e-09 28.7 0.0 9 113 29 128 24 148 0.89 # 17441 # 18004 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 2_25 - 188 Methyltransf_18 PF12847.2 112 5e-11 35.8 0.0 1 1 1.3e-12 1.1e-10 34.7 0.0 4 109 53 146 50 148 0.89 # 17441 # 18004 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 2_13 - 228 Methyltransf_11 PF08241.7 95 0.00049 13.2 0.0 1 2 0.0024 0.19 4.9 0.0 78 93 53 68 48 70 0.84 # 11049 # 11732 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.577 2_13 - 228 Methyltransf_11 PF08241.7 95 0.00049 13.2 0.0 2 2 0.0014 0.11 5.7 0.0 5 54 172 220 168 226 0.82 # 11049 # 11732 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.577 2_3 - 92 DUF2387 PF09526.5 71 0.00014 14.4 0.2 1 1 2.3e-06 0.00018 14.0 0.2 10 47 7 47 5 72 0.76 # 1594 # 1869 # 1 # ID=2_3;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.533 1_8 - 1757 AAA_11 PF13086.1 236 9.8e-05 14.5 1.7 1 1 3.2e-06 0.00025 13.2 0.0 2 72 969 1036 968 1063 0.82 # 4965 # 10235 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.598 3_6 - 180 SSB PF00436.20 104 2.8e-41 132.2 0.3 1 1 4.5e-43 3.5e-41 131.9 0.3 1 101 6 109 6 112 0.96 # 4393 # 4932 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.589 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/7ef9d34b-2dfe-44b9-9447-2851ff018957 # Target file: checkm_output/bins/pm338/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm338/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/7ef9d34b-2dfe-44b9-9447-2851ff018957 checkm_output/bins/pm338/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:03:15 2017 # [ok]