# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_25 - 521 ABC_tran PF00005.22 137 0.00011 14.7 0.0 1 1 1.2e-05 0.00034 13.0 0.0 17 37 264 284 249 349 0.85 # 22326 # 23888 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.499 1_33 - 356 ABC_tran PF00005.22 137 0.00011 14.6 0.0 1 1 7.9e-06 0.00022 13.6 0.0 6 38 173 205 169 237 0.81 # 30955 # 32022 # -1 # ID=1_33;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.478 1_40 - 226 FAD_binding_3 PF01494.14 356 0.0001 13.5 1.7 1 1 3.4e-06 0.00019 12.6 1.7 52 124 132 203 128 214 0.92 # 36946 # 37623 # -1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.463 1_33 - 356 Sigma54_activat PF00158.21 168 3e-06 18.9 0.0 1 1 9.8e-08 5.5e-06 18.0 0.0 9 53 165 209 158 232 0.79 # 30955 # 32022 # -1 # ID=1_33;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.478 1_33 - 356 FtsK_SpoIIIE PF01580.13 205 1.6e-05 16.5 0.0 1 1 4.6e-07 2.6e-05 15.8 0.0 37 58 176 198 147 200 0.80 # 30955 # 32022 # -1 # ID=1_33;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.478 1_56 - 71 MobB PF03205.9 140 2.6e-05 16.1 0.3 1 1 5.5e-07 3.1e-05 15.8 0.3 10 37 13 40 5 46 0.87 # 48438 # 48650 # 1 # ID=1_56;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.479 1_22 - 313 AAA_19 PF13245.1 76 1.4e-05 17.0 0.2 1 1 1.8e-06 3.3e-05 15.7 0.2 11 35 116 140 109 222 0.76 # 19716 # 20654 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.491 1_33 - 356 AAA_19 PF13245.1 76 1.6e-05 16.7 0.1 1 1 3e-06 5.6e-05 15.0 0.1 8 36 176 227 170 283 0.62 # 30955 # 32022 # -1 # ID=1_33;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.478 1_56 - 71 AAA_19 PF13245.1 76 9.4e-05 14.3 0.0 1 1 6.2e-06 0.00012 14.0 0.0 20 48 13 37 11 53 0.83 # 48438 # 48650 # 1 # ID=1_56;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.479 1_10 - 234 CbiA PF01656.18 195 1e-10 33.4 0.7 1 3 0.00053 0.015 6.8 0.1 1 19 5 23 5 38 0.87 # 10470 # 11171 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.336 1_10 - 234 CbiA PF01656.18 195 1e-10 33.4 0.7 2 3 0.04 1.1 0.6 0.0 133 173 50 86 39 93 0.84 # 10470 # 11171 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.336 1_10 - 234 CbiA PF01656.18 195 1e-10 33.4 0.7 3 3 7.1e-09 2e-07 22.7 0.0 118 178 94 153 89 169 0.87 # 10470 # 11171 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.336 1_56 - 71 CbiA PF01656.18 195 5.6e-10 31.0 0.1 1 1 2.1e-11 5.8e-10 30.9 0.1 2 36 6 40 5 58 0.91 # 48438 # 48650 # 1 # ID=1_56;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.479 1_33 - 356 AAA_23 PF13476.1 202 0.0004 12.8 5.3 1 2 0.094 5.3 -0.6 0.1 131 175 125 169 118 180 0.70 # 30955 # 32022 # -1 # ID=1_33;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.478 1_33 - 356 AAA_23 PF13476.1 202 0.0004 12.8 5.3 2 2 6.9e-06 0.00039 12.9 3.9 15 39 168 198 159 199 0.78 # 30955 # 32022 # -1 # ID=1_33;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.478 1_33 - 356 AAA_24 PF13479.1 213 0.00033 12.3 0.0 1 1 9.7e-06 0.00055 11.6 0.0 2 23 177 198 176 212 0.89 # 30955 # 32022 # -1 # ID=1_33;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.478 1_25 - 521 AAA_30 PF13604.1 196 8.6e-05 14.2 0.0 1 1 2.7e-06 0.00015 13.4 0.0 2 44 242 284 241 296 0.87 # 22326 # 23888 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.499 1_31 - 540 TraG-D_C PF12696.2 128 2.2e-28 90.8 0.0 1 1 6.2e-30 3.5e-28 90.2 0.0 1 127 314 437 314 438 0.90 # 28963 # 30582 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.440 1_56 - 71 MipZ PF09140.6 261 3.6e-07 21.5 0.1 1 1 6.8e-09 3.8e-07 21.5 0.1 3 40 5 42 3 55 0.90 # 48438 # 48650 # 1 # ID=1_56;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.479 1_14 - 762 zf-C4_Topoisom PF01396.14 39 9.4e-14 42.8 13.4 1 2 2e-11 1.1e-09 29.8 3.1 6 37 625 656 623 657 0.94 # 12908 # 15193 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.451 1_14 - 762 zf-C4_Topoisom PF01396.14 39 9.4e-14 42.8 13.4 2 2 1.6e-07 9.1e-06 17.3 2.7 2 35 671 700 670 703 0.89 # 12908 # 15193 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.451 1_56 - 71 TIGR00064 TIGR00064 279 0.0002 12.4 1.5 1 1 4.2e-06 0.00023 12.2 1.5 89 116 13 40 3 41 0.89 # 48438 # 48650 # 1 # ID=1_56;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.479 1_25 - 521 AAA_16 PF13191.1 185 4.9e-05 15.4 0.0 1 1 8.3e-06 0.00023 13.2 0.0 18 63 252 298 245 369 0.72 # 22326 # 23888 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.499 1_22 - 313 AAA_16 PF13191.1 185 5.6e-05 15.3 0.4 1 1 3.4e-06 9.4e-05 14.5 0.4 20 47 111 138 104 231 0.73 # 19716 # 20654 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.491 1_33 - 356 AAA_22 PF13401.1 131 1.7e-05 17.1 0.0 1 1 1.8e-06 3.4e-05 16.1 0.0 3 44 177 212 175 239 0.82 # 30955 # 32022 # -1 # ID=1_33;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.478 1_22 - 313 AAA_22 PF13401.1 131 5.8e-05 15.3 0.2 1 1 6e-06 0.00011 14.4 0.2 5 37 116 153 111 264 0.71 # 19716 # 20654 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.491 1_25 - 521 AAA_22 PF13401.1 131 0.00024 13.3 0.0 1 1 3.7e-05 0.00069 11.9 0.0 5 30 259 284 255 324 0.81 # 22326 # 23888 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.499 1_33 - 356 AAA_29 PF13555.1 62 9.2e-05 14.1 0.0 1 1 7.1e-06 0.0002 13.0 0.0 22 46 176 201 167 208 0.77 # 30955 # 32022 # -1 # ID=1_33;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.478 1_22 - 313 AAA_29 PF13555.1 62 0.00049 11.8 0.3 1 1 0.00012 0.0033 9.1 0.4 23 40 116 132 107 137 0.81 # 19716 # 20654 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.491 1_56 - 71 SRP54 PF00448.17 196 3e-05 15.6 0.8 1 1 6.6e-07 3.7e-05 15.3 0.8 11 38 13 40 4 42 0.93 # 48438 # 48650 # 1 # ID=1_56;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.479 1_33 - 356 AAA_28 PF13521.1 163 0.0003 12.9 0.1 1 1 1.8e-05 0.001 11.2 0.0 1 19 180 198 180 218 0.86 # 30955 # 32022 # -1 # ID=1_33;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.478 1_56 - 71 Fer4_NifH PF00142.13 273 8.4e-07 20.4 0.1 1 1 1.7e-08 9.7e-07 20.2 0.1 7 40 10 43 3 48 0.85 # 48438 # 48650 # 1 # ID=1_56;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.479 1_33 - 356 Mg_chelatase PF01078.16 207 8.9e-05 13.8 0.0 1 1 2.7e-06 0.00015 13.0 0.0 15 52 171 208 157 242 0.80 # 30955 # 32022 # -1 # ID=1_33;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.478 1_31 - 540 TrwB_AAD_bind PF10412.4 386 1.7e-16 51.9 0.0 1 1 5.2e-18 2.9e-16 51.0 0.0 244 374 314 445 264 459 0.88 # 28963 # 30582 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.440 1_56 - 71 TIGR01968 TIGR01968 261 2.3e-08 25.4 0.4 1 1 4.4e-10 2.5e-08 25.3 0.4 3 39 4 40 2 51 0.89 # 48438 # 48650 # 1 # ID=1_56;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.479 1_33 - 356 AAA_18 PF13238.1 129 4.1e-05 16.0 0.0 1 1 1.5e-06 8.4e-05 15.0 0.0 1 27 181 224 181 247 0.68 # 30955 # 32022 # -1 # ID=1_33;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.478 1_33 - 356 Sigma54_activ_2 PF14532.1 138 2.1e-05 16.7 0.0 1 1 7.4e-07 4.1e-05 15.7 0.0 13 61 170 218 162 230 0.84 # 30955 # 32022 # -1 # ID=1_33;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.478 1_33 - 356 T2SE PF00437.15 272 2.7e-53 172.7 0.0 1 1 1.8e-54 3.3e-53 172.4 0.0 7 266 30 321 25 327 0.94 # 30955 # 32022 # -1 # ID=1_33;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.478 1_25 - 521 T2SE PF00437.15 272 3e-35 113.4 0.0 1 1 2.4e-36 4.4e-35 112.9 0.0 11 256 128 381 119 396 0.81 # 22326 # 23888 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.499 1_22 - 313 T2SE PF00437.15 272 4.6e-21 66.9 0.1 1 1 3.3e-22 6.3e-21 66.5 0.1 90 264 82 254 46 263 0.78 # 19716 # 20654 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.491 1_25 - 521 NACHT PF05729.7 166 8.7e-05 14.3 0.0 1 2 0.014 0.77 1.5 0.0 82 142 144 203 106 239 0.76 # 22326 # 23888 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.499 1_25 - 521 NACHT PF05729.7 166 8.7e-05 14.3 0.0 2 2 3.9e-05 0.0022 9.8 0.0 3 22 261 280 259 290 0.85 # 22326 # 23888 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.499 1_33 - 356 AAA_17 PF13207.1 121 4.9e-07 22.7 0.0 1 1 1.6e-08 9.2e-07 21.8 0.0 2 62 181 257 180 315 0.72 # 30955 # 32022 # -1 # ID=1_33;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.478 1_33 - 356 Pox_A32 PF04665.7 241 0.00038 11.9 0.0 1 1 1e-05 0.00056 11.3 0.0 11 34 176 199 168 231 0.86 # 30955 # 32022 # -1 # ID=1_33;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.478 1_22 - 313 RuvB_N PF05496.7 234 4.8e-05 14.5 0.1 1 2 0.0046 0.26 2.3 0.0 42 71 107 137 99 155 0.70 # 19716 # 20654 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.491 1_22 - 313 RuvB_N PF05496.7 234 4.8e-05 14.5 0.1 2 2 2.2e-05 0.0012 9.9 0.0 101 166 230 294 223 304 0.83 # 19716 # 20654 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.491 1_56 - 71 VirC1 PF07015.6 231 1.9e-10 32.3 0.0 1 1 3.9e-12 2.2e-10 32.1 0.0 4 54 5 55 2 60 0.92 # 48438 # 48650 # 1 # ID=1_56;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.479 1_40 - 226 GrpE PF01025.14 166 0.031 5.9 21.6 1 2 3.1e-05 0.0017 10.0 3.0 9 109 35 136 30 147 0.66 # 36946 # 37623 # -1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.463 1_40 - 226 GrpE PF01025.14 166 0.031 5.9 21.6 2 2 0.081 4.5 -1.1 12.0 12 69 151 217 140 219 0.69 # 36946 # 37623 # -1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.463 1_31 - 540 T4SS-DNA_transf PF02534.9 469 5.3e-73 238.1 0.0 1 1 1.2e-74 6.9e-73 237.8 0.0 13 459 9 476 3 482 0.86 # 28963 # 30582 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.440 1_25 - 521 RNA_helicase PF00910.17 107 0.00038 12.8 0.0 1 2 0.00024 0.013 7.8 0.0 2 23 262 283 261 299 0.86 # 22326 # 23888 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.499 1_25 - 521 RNA_helicase PF00910.17 107 0.00038 12.8 0.0 2 2 0.016 0.9 1.9 0.0 38 88 456 504 445 510 0.73 # 22326 # 23888 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.499 1_33 - 356 ATP_bind_1 PF03029.12 238 4.1e-05 15.3 0.1 1 1 2.1e-06 0.00012 13.7 0.0 1 26 183 208 183 223 0.89 # 30955 # 32022 # -1 # ID=1_33;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.478 1_14 - 762 Toprim_Crpt PF13342.1 62 1.1e-18 58.8 0.9 1 1 4.3e-20 2.4e-18 57.7 0.9 2 60 694 752 693 754 0.94 # 12908 # 15193 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.451 1_49 - 164 TIGR00922 TIGR00922 172 4e-08 25.0 0.0 1 1 5.4e-09 1.5e-07 23.2 0.0 55 117 52 114 3 123 0.81 # 44170 # 44661 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.421 1_48 - 152 TIGR00922 TIGR00922 172 1.6e-06 19.8 0.1 1 1 6.8e-08 1.9e-06 19.6 0.1 55 107 61 116 11 141 0.73 # 43658 # 44113 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.379 1_9 - 226 FtsA PF14450.1 120 0.00011 14.2 0.1 1 2 0.065 3.7 -0.4 0.0 82 100 71 86 55 100 0.68 # 9785 # 10462 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.375 1_9 - 226 FtsA PF14450.1 120 0.00011 14.2 0.1 2 2 9.3e-06 0.00052 12.0 0.0 23 91 107 215 97 222 0.85 # 9785 # 10462 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.375 1_42 - 831 AAA_10 PF12846.2 304 2.3e-16 52.1 0.0 1 1 2.1e-17 3.9e-16 51.4 0.0 3 301 427 714 425 717 0.79 # 39172 # 41664 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.474 1_22 - 313 AAA_10 PF12846.2 304 1.4e-05 16.7 0.0 1 2 4.8e-05 0.0009 10.8 0.0 3 26 117 140 115 157 0.85 # 19716 # 20654 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.491 1_22 - 313 AAA_10 PF12846.2 304 1.4e-05 16.7 0.0 2 2 0.0062 0.12 3.8 0.0 191 234 200 245 188 264 0.81 # 19716 # 20654 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.491 1_33 - 356 AAA_10 PF12846.2 304 0.00011 13.8 0.0 1 1 9.3e-06 0.00017 13.1 0.0 3 23 180 200 178 212 0.89 # 30955 # 32022 # -1 # ID=1_33;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.478 1_56 - 71 ArsA_ATPase PF02374.10 305 6.4e-08 24.0 0.2 1 1 1.3e-09 7.1e-08 23.8 0.2 3 38 5 40 3 50 0.91 # 48438 # 48650 # 1 # ID=1_56;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.479 1_33 - 356 IstB_IS21 PF01695.12 178 4.3e-06 18.3 0.0 1 1 1.6e-07 9e-06 17.3 0.0 16 67 146 198 135 207 0.76 # 30955 # 32022 # -1 # ID=1_33;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.478 1_22 - 313 AAA_11 PF13086.1 236 0.00024 12.8 0.1 1 1 7.6e-06 0.00043 12.0 0.1 17 72 115 249 102 305 0.60 # 19716 # 20654 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.491 1_15 - 181 SSB PF00436.20 104 1.5e-45 145.5 0.4 1 1 3.3e-47 1.8e-45 145.2 0.4 1 100 6 106 6 113 0.96 # 15258 # 15800 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 1_14 - 762 Zn_ribbon_recom PF13408.1 58 0.00033 13.1 8.8 1 2 0.0017 0.096 5.2 2.9 8 39 624 649 623 657 0.81 # 12908 # 15193 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.451 1_14 - 762 Zn_ribbon_recom PF13408.1 58 0.00033 13.1 8.8 2 2 4.5e-05 0.0025 10.2 0.3 4 31 669 691 667 711 0.84 # 12908 # 15193 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.451 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/c1528cf9-00c3-4260-a406-f59cfa77de2f # Target file: checkm_output/bins/pm326/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm326/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/c1528cf9-00c3-4260-a406-f59cfa77de2f checkm_output/bins/pm326/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:02:56 2017 # [ok]