# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_32 - 323 KaiC PF06745.8 227 0.00015 13.4 0.1 1 1 4.3e-06 0.00032 12.3 0.1 12 43 33 63 27 149 0.80 # 24861 # 25829 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_30 - 187 HTH_IclR PF09339.5 52 1e-05 17.6 0.0 1 1 1.2e-06 2.9e-05 16.2 0.0 18 40 158 180 144 181 0.92 # 22663 # 23223 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.565 1_63 - 71 HTH_IclR PF09339.5 52 4.1e-05 15.7 0.0 1 1 1.9e-06 4.7e-05 15.5 0.0 14 50 20 56 9 58 0.90 # 51268 # 51480 # 1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.559 1_33 - 346 HTH_IclR PF09339.5 52 7.8e-05 14.8 2.7 1 2 0.00036 0.0089 8.2 0.0 16 37 38 59 27 68 0.84 # 26018 # 27055 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.518 1_33 - 346 HTH_IclR PF09339.5 52 7.8e-05 14.8 2.7 2 2 0.0034 0.085 5.1 0.5 30 40 127 137 125 138 0.90 # 26018 # 27055 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.518 1_63 - 71 HrcA_DNA-bdg PF03444.10 79 2.9e-06 19.2 0.0 1 1 4.4e-08 3.3e-06 19.0 0.0 9 61 5 62 1 65 0.78 # 51268 # 51480 # 1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.559 1_32 - 323 ABC_tran PF00005.22 137 5.3e-06 19.3 0.1 1 1 1.4e-07 1e-05 18.4 0.1 2 90 31 120 30 159 0.75 # 24861 # 25829 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_30 - 187 HTH_22 PF13309.1 64 1e-05 17.8 0.1 1 1 4.5e-06 0.00017 13.9 0.0 45 63 161 179 158 180 0.87 # 22663 # 23223 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.565 1_35 - 298 HTH_22 PF13309.1 64 0.00059 12.1 0.2 1 2 0.0045 0.17 4.3 0.0 24 48 6 30 4 33 0.91 # 27663 # 28556 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.406 1_35 - 298 HTH_22 PF13309.1 64 0.00059 12.1 0.2 2 2 0.003 0.11 4.8 0.1 1 33 104 136 104 140 0.92 # 27663 # 28556 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.406 1_3 - 72 DUF463 PF04317.7 443 0.0007 10.7 0.0 1 1 1.1e-05 0.0008 10.5 0.0 4 30 41 67 38 71 0.88 # 1026 # 1241 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.389 1_20 - 425 Cdd1 PF11731.3 93 0.00025 13.5 0.0 1 1 8.1e-06 0.0006 12.3 0.0 10 47 178 215 141 227 0.85 # 12629 # 13903 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.540 1_31 - 555 rve_3 PF13683.1 67 0.00016 13.7 1.3 1 1 7.8e-06 0.00058 11.9 1.3 12 58 282 331 278 339 0.84 # 23207 # 24871 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 1_33 - 346 HTH_38 PF13936.1 44 3.3e-07 22.4 0.8 1 1 5.7e-08 2.1e-06 19.7 0.0 10 41 30 61 26 62 0.89 # 26018 # 27055 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.518 1_30 - 187 HTH_38 PF13936.1 44 6.2e-05 15.1 0.1 1 1 6.3e-06 0.00024 13.2 0.0 13 41 150 179 147 181 0.88 # 22663 # 23223 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.565 1_32 - 323 MobB PF03205.9 140 0.00024 13.3 0.1 1 1 1.1e-05 0.00084 11.6 0.0 2 31 42 70 41 86 0.78 # 24861 # 25829 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_31 - 555 HTH_Tnp_4 PF13613.1 53 0.00025 13.1 0.4 1 1 1.1e-05 0.00083 11.4 0.0 26 44 38 56 35 57 0.90 # 23207 # 24871 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 1_27 - 372 DUF3584 PF12128.3 1201 0.033 3.9 61.1 1 1 0.0042 0.31 0.6 61.0 261 533 79 352 68 366 0.56 # 19200 # 20315 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 1_30 - 187 HTH_8 PF02954.14 42 0.00017 13.7 0.1 1 1 5.9e-06 0.00044 12.3 0.1 24 42 164 182 161 182 0.89 # 22663 # 23223 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.565 1_30 - 187 TetR_N PF00440.18 47 0.00033 12.8 0.9 1 2 0.027 2 0.7 0.0 11 21 3 13 1 13 0.83 # 22663 # 23223 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.565 1_30 - 187 TetR_N PF00440.18 47 0.00033 12.8 0.9 2 2 3.7e-05 0.0028 9.9 0.2 16 35 158 177 149 178 0.88 # 22663 # 23223 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.565 1_32 - 323 AAA_19 PF13245.1 76 4.8e-05 15.6 0.2 1 1 6.6e-06 0.00025 13.3 0.1 6 37 36 67 32 119 0.75 # 24861 # 25829 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_3 - 72 AAA_19 PF13245.1 76 0.00012 14.3 0.0 1 1 3.8e-06 0.00014 14.1 0.0 15 42 42 68 29 71 0.79 # 1026 # 1241 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.389 1_22 - 402 CbiA PF01656.18 195 1.7e-18 59.2 0.0 1 1 4.6e-20 3.5e-18 58.2 0.0 1 141 111 291 111 328 0.75 # 14959 # 16164 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.469 1_32 - 323 PRK PF00485.13 194 0.00025 13.1 0.0 1 1 7e-06 0.00052 12.1 0.0 1 38 42 81 42 132 0.66 # 24861 # 25829 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_21 - 325 Sigma70_r4_2 PF08281.7 54 0.00039 12.4 0.0 1 1 1.6e-05 0.0012 10.8 0.0 24 50 158 184 153 185 0.89 # 13985 # 14959 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.453 1_55 - 330 Rep_3 PF01051.16 222 6.3e-33 106.7 0.2 1 1 1.2e-34 9.2e-33 106.1 0.2 3 214 14 269 13 275 0.91 # 42352 # 43341 # 1 # ID=1_55;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 1_31 - 555 rve PF00665.21 120 9.9e-13 40.8 0.0 1 1 7.2e-14 2.7e-12 39.4 0.0 2 118 157 298 156 300 0.89 # 23207 # 24871 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 1_33 - 346 rve PF00665.21 120 1.9e-10 33.4 0.0 1 1 1.3e-11 4.7e-10 32.2 0.0 18 118 206 305 190 307 0.91 # 26018 # 27055 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.518 1_33 - 346 Terminase_5 PF06056.7 58 0.00011 14.2 0.0 1 1 6.1e-06 0.00046 12.3 0.0 3 35 30 62 28 85 0.86 # 26018 # 27055 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.518 1_32 - 323 AAA_30 PF13604.1 196 0.00012 14.2 0.3 1 1 4.9e-06 0.00037 12.6 0.3 15 128 38 164 27 170 0.55 # 24861 # 25829 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_21 - 325 CPSase_L_D3 PF02787.14 123 0.00025 13.3 0.5 1 1 1.1e-05 0.0008 11.7 0.1 50 98 135 186 128 191 0.79 # 13985 # 14959 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.453 1_64 - 117 GerE PF00196.14 58 4.1e-13 41.0 0.0 1 1 7.9e-15 5.9e-13 40.5 0.0 4 54 32 82 30 85 0.96 # 51465 # 51815 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.587 1_33 - 346 DDE_3 PF13358.1 146 1e-28 92.4 0.0 1 1 2.6e-30 1.9e-28 91.5 0.0 2 138 177 310 176 317 0.96 # 26018 # 27055 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.518 1_22 - 402 MipZ PF09140.6 261 4.3e-06 18.4 0.0 1 2 0.0025 0.19 3.2 0.0 3 50 111 163 109 201 0.73 # 14959 # 16164 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.469 1_22 - 402 MipZ PF09140.6 261 4.3e-06 18.4 0.0 2 2 2.8e-06 0.00021 12.9 0.0 87 136 233 282 220 305 0.87 # 14959 # 16164 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.469 1_5 - 474 DivIC PF04977.10 80 0.0019 10.2 6.6 1 2 1.7e-05 0.0012 10.8 3.5 17 66 75 123 71 124 0.91 # 1814 # 3235 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.581 1_5 - 474 DivIC PF04977.10 80 0.0019 10.2 6.6 2 2 0.055 4.1 -0.5 0.1 49 64 406 421 401 426 0.81 # 1814 # 3235 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.581 1_27 - 372 DUF2316 PF10078.4 89 0.0089 8.6 9.2 1 2 0.00014 0.01 8.4 2.5 5 45 198 238 193 249 0.88 # 19200 # 20315 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 1_27 - 372 DUF2316 PF10078.4 89 0.0089 8.6 9.2 2 2 0.0082 0.61 2.7 0.6 5 42 251 288 247 301 0.86 # 19200 # 20315 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 1_32 - 323 AAA PF00004.24 132 1.1e-06 21.3 0.0 1 1 3.5e-08 2.7e-06 20.2 0.0 3 97 45 152 43 181 0.68 # 24861 # 25829 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_21 - 325 HTH_37 PF13744.1 80 8.7e-05 14.8 1.3 1 2 0.0091 0.68 2.4 0.1 27 55 9 37 6 43 0.82 # 13985 # 14959 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.453 1_21 - 325 HTH_37 PF13744.1 80 8.7e-05 14.8 1.3 2 2 3.8e-05 0.0029 10.0 0.1 27 53 156 182 153 186 0.90 # 13985 # 14959 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.453 1_63 - 71 Rrf2 PF02082.15 83 0.00024 13.8 0.0 1 1 3.3e-06 0.00025 13.7 0.0 19 58 18 57 3 70 0.76 # 51268 # 51480 # 1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.559 1_32 - 323 TIGR00064 TIGR00064 279 5.3e-05 14.7 0.2 1 1 1.4e-06 0.0001 13.7 0.0 72 111 33 72 4 76 0.73 # 24861 # 25829 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_3 - 72 cobW PF02492.14 178 0.00011 14.2 0.0 1 1 1.9e-06 0.00014 13.8 0.0 5 25 42 66 39 71 0.77 # 1026 # 1241 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.389 1_32 - 323 AAA_16 PF13191.1 185 2.7e-11 36.3 1.2 1 1 9.1e-12 3.4e-10 32.7 0.3 22 179 38 153 24 162 0.76 # 24861 # 25829 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_3 - 72 AAA_16 PF13191.1 185 0.00022 13.7 0.1 1 1 6.3e-06 0.00024 13.6 0.1 26 51 39 64 27 71 0.85 # 1026 # 1241 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.389 1_32 - 323 AAA_22 PF13401.1 131 3.7e-16 52.0 0.3 1 1 2.2e-17 8.4e-16 50.8 0.3 3 129 39 170 36 172 0.77 # 24861 # 25829 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_3 - 72 AAA_22 PF13401.1 131 0.00066 12.4 0.0 1 1 3.4e-05 0.0013 11.4 0.0 7 31 40 64 31 69 0.84 # 1026 # 1241 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.389 1_70 - 249 HTH_AraC PF00165.18 42 3.9e-17 54.1 3.8 1 2 8.9e-09 6.7e-07 21.6 0.0 4 39 154 188 151 191 0.87 # 54660 # 55406 # 1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.473 1_70 - 249 HTH_AraC PF00165.18 42 3.9e-17 54.1 3.8 2 2 1.7e-12 1.3e-10 33.4 0.3 11 39 209 238 207 240 0.94 # 54660 # 55406 # 1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.473 1_35 - 298 HTH_1 PF00126.22 60 2.9e-16 51.5 0.0 1 1 1.2e-17 8.7e-16 50.0 0.0 2 60 7 65 6 65 0.96 # 27663 # 28556 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.406 1_33 - 346 LZ_Tnp_IS481 PF13011.1 85 3.5e-06 19.8 0.2 1 1 1.1e-07 8.3e-06 18.6 0.2 12 69 27 82 15 89 0.91 # 26018 # 27055 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.518 1_33 - 346 HTH_32 PF13565.1 77 2.8e-12 39.9 2.9 1 2 0.0032 0.12 5.8 0.0 32 77 24 61 8 61 0.81 # 26018 # 27055 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.518 1_33 - 346 HTH_32 PF13565.1 77 2.8e-12 39.9 2.9 2 2 2.9e-13 1.1e-11 38.0 0.3 1 77 56 136 56 136 0.82 # 26018 # 27055 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.518 1_31 - 555 HTH_32 PF13565.1 77 8.5e-05 15.9 8.9 1 3 0.0033 0.12 5.7 0.1 33 77 11 52 2 52 0.67 # 23207 # 24871 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 1_31 - 555 HTH_32 PF13565.1 77 8.5e-05 15.9 8.9 2 3 0.0011 0.042 7.2 0.1 21 63 61 113 54 120 0.69 # 23207 # 24871 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 1_31 - 555 HTH_32 PF13565.1 77 8.5e-05 15.9 8.9 3 3 0.0055 0.21 5.0 0.1 1 18 131 148 131 160 0.79 # 23207 # 24871 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 1_33 - 346 HTH_23 PF13384.1 50 1.3e-11 36.4 2.8 1 1 1.6e-12 3e-11 35.2 0.0 3 50 26 73 24 73 0.94 # 26018 # 27055 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.518 1_18 - 584 HTH_23 PF13384.1 50 7e-06 18.2 0.0 1 1 1.3e-06 2.4e-05 16.5 0.0 13 45 70 99 67 104 0.88 # 10185 # 11936 # -1 # ID=1_18;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.594 1_30 - 187 HTH_23 PF13384.1 50 9.3e-06 17.8 0.0 1 1 1.3e-06 2.4e-05 16.5 0.0 12 42 152 183 148 186 0.81 # 22663 # 23223 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.565 1_31 - 555 HTH_23 PF13384.1 50 0.0027 10.0 0.1 1 2 0.00014 0.0027 10.0 0.1 20 39 34 53 29 57 0.88 # 23207 # 24871 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 1_31 - 555 HTH_23 PF13384.1 50 0.0027 10.0 0.1 2 2 0.0023 0.043 6.1 0.5 32 42 130 140 128 147 0.84 # 23207 # 24871 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 1_30 - 187 HTH_7 PF02796.10 45 5.6e-10 31.5 0.1 1 1 4.8e-11 1.2e-09 30.4 0.1 1 42 140 179 140 181 0.93 # 22663 # 23223 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.565 1_31 - 555 HTH_7 PF02796.10 45 2e-05 16.9 0.2 1 1 3e-06 7.6e-05 15.1 0.2 23 43 33 53 30 54 0.93 # 23207 # 24871 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 1_33 - 346 HTH_7 PF02796.10 45 0.00018 13.9 0.2 1 2 0.00013 0.0033 9.8 0.0 14 38 33 57 21 61 0.76 # 26018 # 27055 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.518 1_33 - 346 HTH_7 PF02796.10 45 0.00018 13.9 0.2 2 2 0.066 1.6 1.2 0.1 35 43 129 137 119 139 0.79 # 26018 # 27055 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.518 1_32 - 323 NB-ARC PF00931.17 287 0.0003 12.2 0.3 1 1 5.9e-06 0.00045 11.6 0.3 8 104 29 126 22 144 0.74 # 24861 # 25829 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_63 - 71 FeoC PF09012.5 69 0.00035 12.8 0.0 1 1 5.4e-06 0.00041 12.6 0.0 14 52 24 62 6 66 0.89 # 51268 # 51480 # 1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.559 1_33 - 346 HTH_29 PF13551.1 112 1.3e-18 59.7 0.1 1 1 1.4e-19 3.4e-18 58.4 0.1 1 111 30 139 30 140 0.92 # 26018 # 27055 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.518 1_31 - 555 HTH_29 PF13551.1 112 5.3e-06 19.1 0.5 1 2 3.4e-05 0.00085 12.0 0.1 14 91 33 109 25 121 0.65 # 23207 # 24871 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 1_31 - 555 HTH_29 PF13551.1 112 5.3e-06 19.1 0.5 2 2 0.011 0.28 3.9 0.0 25 44 128 147 125 155 0.80 # 23207 # 24871 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 1_30 - 187 HTH_29 PF13551.1 112 1e-05 18.2 1.2 1 2 0.067 1.7 1.4 0.1 32 62 120 149 104 156 0.71 # 22663 # 23223 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.565 1_30 - 187 HTH_29 PF13551.1 112 1e-05 18.2 1.2 2 2 5.5e-06 0.00014 14.5 0.0 10 38 157 184 152 185 0.90 # 22663 # 23223 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.565 1_32 - 323 Arch_ATPase PF01637.13 234 2.7e-05 16.4 0.2 1 1 8.6e-07 6.4e-05 15.2 0.2 8 135 30 142 27 164 0.68 # 24861 # 25829 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_32 - 323 AAA_5 PF07728.9 139 6e-05 15.3 0.1 1 1 7e-06 0.00053 12.2 0.2 5 90 46 149 43 152 0.85 # 24861 # 25829 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_32 - 323 ResIII PF04851.10 184 7.3e-06 18.4 0.2 1 2 1.7e-05 0.0013 11.1 0.3 29 101 44 110 20 121 0.72 # 24861 # 25829 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_32 - 323 ResIII PF04851.10 184 7.3e-06 18.4 0.2 2 2 0.00058 0.043 6.1 0.0 131 162 109 140 96 153 0.63 # 24861 # 25829 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_32 - 323 TrwB_AAD_bind PF10412.4 386 0.00011 13.4 0.5 1 3 1.7e-05 0.0012 9.9 0.0 14 44 39 69 35 76 0.83 # 24861 # 25829 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_32 - 323 TrwB_AAD_bind PF10412.4 386 0.00011 13.4 0.5 2 3 0.021 1.6 -0.3 0.0 234 275 115 158 112 169 0.78 # 24861 # 25829 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_32 - 323 TrwB_AAD_bind PF10412.4 386 0.00011 13.4 0.5 3 3 0.037 2.7 -1.1 0.0 128 182 251 306 240 311 0.71 # 24861 # 25829 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_32 - 323 AAA_18 PF13238.1 129 6.9e-05 15.7 0.0 1 1 1.7e-06 0.00013 14.8 0.0 1 23 43 90 43 138 0.67 # 24861 # 25829 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_20 - 425 IMS_HHH PF11798.3 32 2.5e-08 26.2 0.1 1 1 7.8e-10 5.9e-08 25.0 0.1 5 32 174 201 169 201 0.89 # 12629 # 13903 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.540 1_26 - 170 TIGR01406 TIGR01406 231 0.00025 12.9 0.0 1 1 5e-06 0.00038 12.3 0.0 3 59 106 156 105 159 0.81 # 18698 # 19207 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.592 1_32 - 323 DUF87 PF01935.12 229 0.00044 12.6 0.2 1 3 5.2e-05 0.0039 9.5 0.0 26 52 43 69 40 73 0.85 # 24861 # 25829 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_32 - 323 DUF87 PF01935.12 229 0.00044 12.6 0.2 2 3 0.083 6.2 -1.0 0.0 135 194 79 139 68 151 0.68 # 24861 # 25829 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_32 - 323 DUF87 PF01935.12 229 0.00044 12.6 0.2 3 3 0.067 5 -0.7 0.0 121 195 198 299 171 308 0.59 # 24861 # 25829 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_33 - 346 HTH_28 PF13518.1 52 7.1e-10 31.3 0.1 1 1 2.1e-10 5.3e-09 28.5 0.0 1 50 29 79 29 82 0.91 # 26018 # 27055 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.518 1_30 - 187 HTH_28 PF13518.1 52 1.3e-06 20.9 1.1 1 1 7.1e-08 1.8e-06 20.4 0.1 4 38 149 184 148 185 0.92 # 22663 # 23223 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.565 1_31 - 555 HTH_28 PF13518.1 52 0.0014 11.2 0.0 1 2 5.4e-05 0.0014 11.2 0.0 15 35 34 54 32 64 0.90 # 23207 # 24871 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 1_31 - 555 HTH_28 PF13518.1 52 0.0014 11.2 0.0 2 2 0.037 0.93 2.2 0.4 26 37 129 140 125 145 0.87 # 23207 # 24871 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 1_32 - 323 TIGR00041 TIGR00041 196 0.00025 13.0 0.0 1 1 5.7e-06 0.00043 12.2 0.0 2 54 38 96 37 122 0.74 # 24861 # 25829 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_21 - 325 HTH_24 PF13412.1 48 1.4e-05 16.9 0.2 1 1 2.5e-06 9.4e-05 14.3 0.0 13 39 157 182 153 184 0.84 # 13985 # 14959 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.453 1_63 - 71 HTH_24 PF13412.1 48 0.00011 14.1 0.0 1 1 4.2e-06 0.00016 13.6 0.0 7 45 8 52 3 55 0.78 # 51268 # 51480 # 1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.559 1_70 - 249 HTH_18 PF12833.2 81 6.5e-16 50.8 0.2 1 1 1.9e-17 1.4e-15 49.7 0.0 1 79 164 240 164 241 0.96 # 54660 # 55406 # 1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.473 1_63 - 71 DUF2250 PF10007.4 93 3.3e-05 16.3 0.0 1 1 4.7e-07 3.5e-05 16.2 0.0 25 57 27 59 8 63 0.89 # 51268 # 51480 # 1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.559 1_33 - 346 HTH_33 PF13592.1 60 1.1e-09 30.3 0.7 1 1 6.2e-11 4.7e-09 28.3 0.3 3 50 108 155 107 157 0.94 # 26018 # 27055 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.518 1_32 - 323 DUF2075 PF09848.4 352 1.3e-06 20.0 0.1 1 1 5.2e-08 1.9e-06 19.5 0.1 2 97 41 138 40 165 0.71 # 24861 # 25829 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_3 - 72 DUF2075 PF09848.4 352 1.8e-05 16.3 0.0 1 1 5.4e-07 2e-05 16.1 0.0 4 30 40 66 37 71 0.78 # 1026 # 1241 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.389 1_43 - 117 HTH_OrfB_IS605 PF12323.3 46 6.1e-19 59.7 0.0 1 1 1.3e-20 9.8e-19 59.0 0.0 1 45 1 45 1 46 0.98 # 34319 # 34669 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 1_32 - 323 T2SE PF00437.15 272 2e-06 19.3 0.7 1 1 1.3e-07 9.8e-06 17.1 0.7 110 161 22 72 6 137 0.81 # 24861 # 25829 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_32 - 323 NACHT PF05729.7 166 0.00036 12.7 0.2 1 1 1.1e-05 0.00086 11.5 0.2 1 28 41 68 41 140 0.77 # 24861 # 25829 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_32 - 323 UPF0079 PF02367.12 123 8.7e-05 14.7 0.0 1 1 2.2e-06 0.00016 13.8 0.0 3 45 28 70 26 114 0.84 # 24861 # 25829 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_32 - 323 AAA_17 PF13207.1 121 0.00011 15.5 0.1 1 1 3.4e-06 0.00025 14.4 0.0 1 40 42 89 42 186 0.63 # 24861 # 25829 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_32 - 323 TIGR02211 TIGR02211 221 0.00034 12.3 0.0 1 1 7.3e-06 0.00055 11.7 0.0 11 51 20 60 12 86 0.88 # 24861 # 25829 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_3 - 72 Viral_helicase1 PF01443.13 234 0.00048 12.1 0.1 1 1 8.5e-06 0.00064 11.7 0.1 3 29 42 66 40 70 0.83 # 1026 # 1241 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.389 1_32 - 323 AAA_14 PF13173.1 128 3.1e-06 19.6 0.0 1 1 1.7e-07 1.3e-05 17.6 0.0 2 96 40 164 39 193 0.62 # 24861 # 25829 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_33 - 346 HTH_Tnp_ISL3 PF13542.1 52 0.00023 12.9 0.4 1 1 2.3e-05 0.00085 11.0 0.4 18 49 30 62 26 62 0.79 # 26018 # 27055 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.518 1_31 - 555 HTH_Tnp_ISL3 PF13542.1 52 0.0003 12.5 0.0 1 1 2.7e-05 0.001 10.8 0.0 30 49 34 53 32 55 0.90 # 23207 # 24871 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 1_32 - 323 AAA_33 PF13671.1 143 0.00012 14.5 0.0 1 1 3.7e-06 0.00027 13.3 0.0 1 45 42 100 42 132 0.60 # 24861 # 25829 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_3 - 72 ArgK PF03308.11 267 3.8e-05 15.0 0.0 1 1 5.2e-07 3.9e-05 15.0 0.0 28 59 36 67 17 70 0.83 # 1026 # 1241 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.389 1_63 - 71 HTH_15 PF12324.3 77 3.1e-05 16.1 0.0 1 2 5.1e-06 0.00038 12.6 0.0 34 65 20 51 16 55 0.91 # 51268 # 51480 # 1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.559 1_63 - 71 HTH_15 PF12324.3 77 3.1e-05 16.1 0.0 2 2 0.01 0.75 2.1 0.0 12 28 53 69 49 70 0.87 # 51268 # 51480 # 1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.559 1_63 - 71 HTH_45 PF14947.1 77 0.00016 14.0 0.1 1 1 3.1e-06 0.00023 13.5 0.1 18 52 22 58 2 63 0.71 # 51268 # 51480 # 1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.559 1_33 - 346 DUF1836 PF08876.6 105 0.00036 12.8 0.0 1 1 1.4e-05 0.001 11.4 0.0 47 89 13 55 10 64 0.86 # 26018 # 27055 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.518 1_27 - 372 TIGR00422 TIGR00422 863 0.015 5.3 17.2 1 1 0.00031 0.024 4.7 17.0 719 856 133 270 70 276 0.82 # 19200 # 20315 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 1_33 - 346 HTH_17 PF12728.2 51 9.6e-05 15.2 0.3 1 2 4.3e-05 0.0032 10.3 0.0 2 45 41 90 40 92 0.87 # 26018 # 27055 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.518 1_33 - 346 HTH_17 PF12728.2 51 9.6e-05 15.2 0.3 2 2 0.034 2.5 1.0 0.0 13 25 127 139 122 147 0.86 # 26018 # 27055 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.518 1_56 - 129 BOF PF04076.8 103 4.9e-44 140.9 0.7 1 1 7.9e-46 5.9e-44 140.7 0.7 2 102 25 125 24 126 0.98 # 43882 # 44268 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.457 1_32 - 323 PIF1 PF05970.9 364 2.1e-05 16.0 0.0 1 1 6.3e-07 4.8e-05 14.9 0.0 7 127 27 149 23 167 0.68 # 24861 # 25829 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_63 - 71 TrmB PF01978.14 68 2.4e-05 16.5 0.0 1 1 8.1e-07 3.1e-05 16.2 0.0 22 56 24 58 22 68 0.91 # 51268 # 51480 # 1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.559 1_30 - 187 TrmB PF01978.14 68 6.8e-05 15.1 0.0 1 1 3.6e-06 0.00013 14.1 0.0 21 45 157 181 148 184 0.88 # 22663 # 23223 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.565 1_26 - 170 RNase_T PF00929.19 164 3.2e-07 23.3 0.0 1 1 6.3e-09 4.7e-07 22.7 0.0 1 55 106 152 106 158 0.89 # 18698 # 19207 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.592 1_32 - 323 AAA_10 PF12846.2 304 7.6e-07 21.3 0.1 1 3 8.4e-06 0.00031 12.7 0.0 3 34 42 73 40 106 0.73 # 24861 # 25829 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_32 - 323 AAA_10 PF12846.2 304 7.6e-07 21.3 0.1 2 3 0.0013 0.048 5.5 0.0 216 245 120 150 79 207 0.83 # 24861 # 25829 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_32 - 323 AAA_10 PF12846.2 304 7.6e-07 21.3 0.1 3 3 0.072 2.7 -0.3 0.0 106 170 239 301 179 314 0.57 # 24861 # 25829 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_3 - 72 AAA_10 PF12846.2 304 0.00031 12.7 0.1 1 2 0.0013 0.047 5.5 0.0 272 285 15 32 2 34 0.75 # 1026 # 1241 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.389 1_3 - 72 AAA_10 PF12846.2 304 0.00031 12.7 0.1 2 2 0.0011 0.04 5.8 0.0 2 29 38 65 37 69 0.87 # 1026 # 1241 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.389 1_63 - 71 HTH_20 PF12840.2 61 0.00014 14.2 0.0 1 1 4.1e-06 0.00015 14.0 0.0 19 59 9 59 4 61 0.84 # 51268 # 51480 # 1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.559 1_55 - 330 HTH_20 PF12840.2 61 0.00025 13.4 0.0 1 2 0.0057 0.21 4.0 0.0 24 46 106 128 101 129 0.89 # 42352 # 43341 # 1 # ID=1_55;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 1_55 - 330 HTH_20 PF12840.2 61 0.00025 13.4 0.0 2 2 0.00075 0.028 6.8 0.0 19 58 217 263 190 266 0.79 # 42352 # 43341 # 1 # ID=1_55;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 1_22 - 402 AAA_31 PF13614.1 157 0.00034 13.1 0.1 1 2 0.071 5.3 -0.6 0.0 12 61 120 174 110 209 0.55 # 14959 # 16164 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.469 1_22 - 402 AAA_31 PF13614.1 157 0.00034 13.1 0.1 2 2 3.1e-05 0.0023 10.3 0.0 108 147 235 273 231 279 0.86 # 14959 # 16164 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.469 1_63 - 71 FaeA PF04703.7 62 9.5e-33 104.8 0.0 1 1 1.4e-34 1e-32 104.6 0.0 1 61 1 70 1 70 0.99 # 51268 # 51480 # 1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.559 1_20 - 425 DNA_pol_lambd_f PF10391.4 52 0.00023 13.2 0.0 1 1 1e-05 0.00078 11.5 0.0 5 29 183 207 179 218 0.85 # 12629 # 13903 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.540 1_3 - 72 AAA_11 PF13086.1 236 0.00019 13.5 0.0 1 1 2.5e-06 0.00019 13.5 0.0 11 43 32 63 17 71 0.78 # 1026 # 1241 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.389 1_23 - 314 Glyco_trans_4_3 PF12000.3 171 1.6e-06 20.3 0.1 1 2 0.00013 0.0098 8.0 0.0 14 84 112 182 97 188 0.77 # 16579 # 17520 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.545 1_23 - 314 Glyco_trans_4_3 PF12000.3 171 1.6e-06 20.3 0.1 2 2 3.4e-05 0.0026 9.9 0.0 19 65 209 256 201 261 0.90 # 16579 # 17520 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.545 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/a761a031-b76f-4073-a100-01732154f159 # Target file: checkm_output/bins/pm293/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm293/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/a761a031-b76f-4073-a100-01732154f159 checkm_output/bins/pm293/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:02:00 2017 # [ok]