# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_30 - 431 ATP-synt_ab PF00006.20 215 5e-72 236.1 0.0 1 1 2.9e-74 7.8e-72 235.5 0.0 1 215 138 349 138 349 1.00 # 26555 # 27847 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.391 4_11 - 72 Zn_Tnp_IS1 PF03811.8 36 3.9e-20 65.4 9.8 1 1 2e-22 5.3e-20 65.0 9.8 1 36 1 35 1 35 0.99 # 7437 # 7652 # 1 # ID=4_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 2_4 - 754 TruB_N PF01509.13 149 0.00087 13.8 0.0 1 1 6.4e-06 0.0017 12.8 0.0 20 103 10 99 7 114 0.81 # 2447 # 4708 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.485 48_1 - 190 HTH_IclR PF09339.5 52 8.7e-07 22.8 0.2 1 1 2.1e-08 2.8e-06 21.2 0.1 15 40 14 39 13 40 0.95 # 87 # 656 # 1 # ID=48_1;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 10_2 - 99 HTH_IclR PF09339.5 52 3.7e-05 17.6 0.1 1 1 4e-07 5.4e-05 17.1 0.1 18 46 27 55 18 57 0.86 # 375 # 671 # 1 # ID=10_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.455 1_30 - 431 ABC_tran PF00005.22 137 0.00025 15.7 0.0 1 1 5.6e-06 0.0005 14.7 0.0 6 62 147 208 144 254 0.78 # 26555 # 27847 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.391 5_2 - 260 ABC_tran PF00005.22 137 0.0004 15.0 0.3 1 1 4e-05 0.0036 11.9 0.0 8 30 99 121 93 132 0.86 # 579 # 1358 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 26_2 - 107 ABC_tran PF00005.22 137 0.00062 14.4 0.0 1 1 1.1e-05 0.001 13.7 0.0 8 29 60 81 54 87 0.86 # 1184 # 1504 # -1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.424 48_1 - 190 HTH_35 PF13693.1 78 0.002 12.2 0.0 1 1 1.3e-05 0.0036 11.4 0.0 10 37 12 39 8 57 0.90 # 87 # 656 # 1 # ID=48_1;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 48_1 - 190 HTH_AsnC-type PF13404.1 42 0.00024 14.9 0.0 1 1 4.4e-06 0.00058 13.7 0.0 18 36 18 36 13 40 0.91 # 87 # 656 # 1 # ID=48_1;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 10_2 - 99 HTH_AsnC-type PF13404.1 42 0.00078 13.3 0.0 1 1 9.7e-06 0.0013 12.6 0.0 18 35 28 45 22 50 0.91 # 375 # 671 # 1 # ID=10_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.455 11_2 - 399 HHH_5 PF14520.1 60 0.00018 16.0 3.5 1 3 0.095 25 -0.5 0.3 27 51 126 149 107 151 0.61 # 761 # 1957 # 1 # ID=11_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 11_2 - 399 HHH_5 PF14520.1 60 0.00018 16.0 3.5 2 3 4.5e-05 0.012 10.1 0.1 16 60 182 229 174 229 0.85 # 761 # 1957 # 1 # ID=11_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 11_2 - 399 HHH_5 PF14520.1 60 0.00018 16.0 3.5 3 3 0.0029 0.76 4.3 0.0 7 22 278 293 256 317 0.76 # 761 # 1957 # 1 # ID=11_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 11_6 - 199 rve_3 PF13683.1 67 3.2e-20 65.8 0.1 1 1 3.3e-21 5.1e-20 65.1 0.1 2 67 120 186 119 186 0.98 # 4128 # 4724 # -1 # ID=11_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.504 34_3 - 302 rve_3 PF13683.1 67 1.8e-19 63.4 0.1 1 1 4.1e-20 6.4e-19 61.6 0.0 2 67 216 281 215 281 0.98 # 411 # 1316 # 1 # ID=34_3;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.551 37_1 - 273 rve_3 PF13683.1 67 1.9e-19 63.3 0.2 1 1 2.9e-20 4.6e-19 62.1 0.2 2 67 194 260 193 260 0.98 # 148 # 966 # -1 # ID=37_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.514 4_10 - 192 rve_3 PF13683.1 67 9.4e-18 57.9 0.0 1 1 9.1e-19 1.4e-17 57.3 0.0 4 67 118 182 115 182 0.96 # 6522 # 7097 # 1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.531 17_4 - 74 rve_3 PF13683.1 67 9.3e-13 41.9 0.2 1 1 6.9e-14 1.1e-12 41.7 0.2 14 67 2 55 1 55 0.96 # 2872 # 3093 # -1 # ID=17_4;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.495 5_7 - 74 rve_3 PF13683.1 67 9.3e-13 41.9 0.2 1 1 6.9e-14 1.1e-12 41.7 0.2 14 67 2 55 1 55 0.96 # 7213 # 7434 # -1 # ID=5_7;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.500 11_4 - 132 rve_3 PF13683.1 67 3.1e-12 40.2 0.0 1 1 3.4e-13 5.4e-12 39.4 0.0 6 67 58 121 53 121 0.92 # 3284 # 3679 # -1 # ID=11_4;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.505 53_1 - 183 rve_3 PF13683.1 67 2.5e-09 30.9 0.0 1 1 2.5e-10 3.9e-09 30.3 0.0 6 53 136 183 131 183 0.94 # 3 # 551 # -1 # ID=53_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.554 14_1 - 55 rve_3 PF13683.1 67 1.6e-08 28.3 0.0 1 1 1.2e-09 1.8e-08 28.1 0.0 2 31 8 37 7 45 0.94 # 2 # 166 # 1 # ID=14_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.503 47_4 - 55 rve_3 PF13683.1 67 1.6e-08 28.3 0.0 1 1 1.2e-09 1.8e-08 28.1 0.0 2 31 8 37 7 45 0.94 # 545 # 709 # -1 # ID=47_4;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.503 20_3 - 39 rve_3 PF13683.1 67 3.9e-08 27.0 1.0 1 1 3.6e-09 5.7e-08 26.5 1.0 50 67 1 18 1 18 0.95 # 2821 # 2937 # -1 # ID=20_3;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.487 49_1 - 39 rve_3 PF13683.1 67 3.9e-08 27.0 1.0 1 1 3.6e-09 5.7e-08 26.5 1.0 50 67 1 18 1 18 0.95 # 541 # 657 # -1 # ID=49_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.487 62_1 - 39 rve_3 PF13683.1 67 3.9e-08 27.0 1.0 1 1 3.6e-09 5.7e-08 26.5 1.0 50 67 1 18 1 18 0.95 # 164 # 280 # -1 # ID=62_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.487 1_41 - 242 rve_3 PF13683.1 67 1.1e-07 25.6 0.0 1 1 1.8e-08 2.8e-07 24.3 0.0 2 38 194 230 193 236 0.91 # 33585 # 34310 # -1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.525 39_2 - 167 rve_3 PF13683.1 67 1.2e-07 25.6 0.2 1 1 1.5e-08 2.3e-07 24.6 0.1 2 31 133 162 132 164 0.95 # 389 # 889 # 1 # ID=39_2;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.567 18_4 - 74 rve_3 PF13683.1 67 1.3e-07 25.4 0.0 1 1 1.1e-08 1.7e-07 25.0 0.0 2 29 42 69 41 73 0.93 # 1324 # 1545 # -1 # ID=18_4;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.527 5_1 - 193 rve_3 PF13683.1 67 0.00038 14.3 0.2 1 1 9.4e-05 0.0015 12.4 0.1 6 65 72 139 67 140 0.87 # 1 # 579 # 1 # ID=5_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.542 5_2 - 260 Sigma54_activat PF00158.21 168 0.00026 14.8 0.1 1 1 1.3e-05 0.0018 12.1 0.1 18 53 98 133 82 197 0.69 # 579 # 1358 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 26_2 - 107 Sigma54_activat PF00158.21 168 0.0014 12.4 0.0 1 1 1.5e-05 0.0021 11.9 0.0 18 42 59 83 42 97 0.77 # 1184 # 1504 # -1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.424 1_25 - 211 HTH_DeoR PF08220.7 57 0.0017 12.2 0.0 1 1 1.3e-05 0.0036 11.2 0.0 5 29 105 129 104 132 0.91 # 20659 # 21291 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.327 10_2 - 99 HTH_40 PF14493.1 91 6.1e-06 20.7 0.0 1 1 5.9e-08 7.9e-06 20.4 0.0 10 64 24 78 19 96 0.86 # 375 # 671 # 1 # ID=10_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.455 48_1 - 190 HTH_40 PF14493.1 91 0.00013 16.4 0.0 1 1 1.6e-06 0.00021 15.8 0.0 4 35 8 39 5 72 0.90 # 87 # 656 # 1 # ID=48_1;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 48_1 - 190 HTH_38 PF13936.1 44 1.4e-11 38.1 0.3 1 1 1.3e-12 7e-11 35.9 0.1 6 41 3 38 2 40 0.94 # 87 # 656 # 1 # ID=48_1;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 10_2 - 99 HTH_38 PF13936.1 44 1.6e-07 25.1 0.0 1 1 4.5e-09 2.4e-07 24.5 0.0 17 38 24 45 19 50 0.87 # 375 # 671 # 1 # ID=10_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.455 45_1 - 162 HTH_38 PF13936.1 44 4.7e-05 17.2 0.1 1 1 1.7e-06 9.3e-05 16.3 0.1 7 41 27 61 11 62 0.94 # 249 # 734 # 1 # ID=45_1;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.547 8_4 - 96 HTH_38 PF13936.1 44 0.00082 13.2 0.0 1 1 2.4e-05 0.0013 12.7 0.0 11 39 36 65 31 66 0.88 # 1570 # 1857 # 1 # ID=8_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.455 31_2 - 116 HTH_38 PF13936.1 44 0.0022 11.9 0.5 1 2 0.00049 0.026 8.4 0.0 19 43 29 53 3 54 0.66 # 448 # 795 # -1 # ID=31_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 31_2 - 116 HTH_38 PF13936.1 44 0.0022 11.9 0.5 2 2 0.07 3.7 1.5 0.3 5 18 65 78 64 85 0.77 # 448 # 795 # -1 # ID=31_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 10_2 - 99 SpoIIID PF12116.3 82 2.7e-05 18.4 0.0 1 1 1.3e-07 3.6e-05 18.0 0.0 17 38 25 46 19 91 0.89 # 375 # 671 # 1 # ID=10_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.455 3_1 - 668 MobB PF03205.9 140 0.0029 11.6 0.0 1 1 2.4e-05 0.0063 10.5 0.0 7 34 124 151 120 157 0.89 # 523 # 2526 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.533 8_4 - 96 MarR PF01047.17 59 0.00038 14.5 0.0 1 1 2.3e-06 0.0006 13.8 0.0 8 37 37 66 31 66 0.85 # 1570 # 1857 # 1 # ID=8_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.455 54_2 - 121 Sigma54_DBD PF04552.8 160 0.00033 14.5 0.1 1 1 1.7e-06 0.00046 14.0 0.1 99 154 45 98 28 104 0.77 # 135 # 497 # 1 # ID=54_2;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.556 13_2 - 534 TBPIP PF07106.8 169 0.00037 14.4 3.4 1 1 6.1e-06 0.00081 13.2 3.4 74 142 16 84 4 98 0.86 # 578 # 2179 # 1 # ID=13_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.524 10_5 - 531 TBPIP PF07106.8 169 0.064 7.1 7.0 1 1 0.0011 0.14 5.9 7.0 80 153 8 79 2 95 0.76 # 1520 # 3112 # 1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.542 10_2 - 99 TetR_N PF00440.18 47 0.00015 15.6 0.0 1 1 2e-06 0.00027 14.9 0.0 15 37 26 48 25 49 0.91 # 375 # 671 # 1 # ID=10_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.455 48_1 - 190 TetR_N PF00440.18 47 0.0027 11.7 0.1 1 1 6.5e-05 0.0087 10.1 0.0 16 36 17 37 16 43 0.86 # 87 # 656 # 1 # ID=48_1;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 3_5 - 1648 AAA_19 PF13245.1 76 2.8e-07 24.6 1.5 1 1 1.2e-08 1.1e-06 22.6 0.3 7 76 872 938 865 938 0.74 # 3573 # 8516 # 1 # ID=3_5;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.600 5_2 - 260 AAA_19 PF13245.1 76 0.00072 13.6 0.0 1 1 1.9e-05 0.0017 12.4 0.0 10 42 103 130 95 154 0.79 # 579 # 1358 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 26_2 - 107 AAA_19 PF13245.1 76 0.0016 12.5 0.0 1 1 3e-05 0.0027 11.8 0.0 10 30 64 83 57 93 0.80 # 1184 # 1504 # -1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.424 5_3 - 400 CbiA PF01656.18 195 7.3e-22 72.0 0.0 1 1 4.5e-24 1.2e-21 71.3 0.0 1 144 111 294 111 321 0.74 # 2084 # 3283 # 1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.443 48_1 - 190 Sigma70_r4_2 PF08281.7 54 2.3e-07 24.5 0.0 1 1 1.2e-08 5.3e-07 23.4 0.0 25 48 16 39 12 40 0.94 # 87 # 656 # 1 # ID=48_1;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 10_2 - 99 Sigma70_r4_2 PF08281.7 54 6.4e-06 19.9 0.0 1 1 2.4e-07 1.1e-05 19.2 0.0 18 49 19 50 18 53 0.93 # 375 # 671 # 1 # ID=10_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.455 1_4 - 310 Sigma70_r4_2 PF08281.7 54 0.00031 14.5 0.0 1 1 2e-05 0.00088 13.0 0.0 24 47 146 169 143 173 0.85 # 3119 # 4048 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.338 7_1 - 82 Sigma70_r4_2 PF08281.7 54 0.00041 14.1 0.0 1 1 1.9e-05 0.00086 13.1 0.0 25 52 23 50 14 52 0.92 # 111 # 356 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.476 37_2 - 80 Sigma70_r4_2 PF08281.7 54 0.00073 13.3 0.0 1 1 4.6e-05 0.0021 11.9 0.0 25 52 2 29 1 31 0.94 # 1002 # 1241 # -1 # ID=37_2;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.471 5_4 - 327 Sigma70_r4_2 PF08281.7 54 0.0054 10.5 2.2 1 1 0.00018 0.0079 10.0 0.1 24 50 159 185 153 186 0.88 # 3283 # 4263 # 1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.423 42_2 - 169 Mur_ligase PF01225.20 83 0.001 13.4 0.0 1 1 5.9e-06 0.0016 12.9 0.0 8 49 60 107 58 138 0.78 # 282 # 788 # 1 # ID=42_2;partial=01;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.529 39_2 - 167 rve PF00665.21 120 5e-33 108.1 0.0 1 1 3.6e-34 6.1e-33 107.8 0.0 2 120 45 161 44 161 0.98 # 389 # 889 # 1 # ID=39_2;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.567 4_10 - 192 rve PF00665.21 120 1.4e-31 103.5 0.0 1 1 1.1e-32 1.8e-31 103.0 0.0 3 119 29 143 27 144 0.96 # 6522 # 7097 # 1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.531 53_1 - 183 rve PF00665.21 120 5.6e-28 91.8 0.0 1 1 4.3e-29 7.2e-28 91.4 0.0 2 119 45 159 44 160 0.97 # 3 # 551 # -1 # ID=53_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.554 37_1 - 273 rve PF00665.21 120 1.1e-25 84.4 0.0 1 1 1.1e-26 1.9e-25 83.6 0.0 2 119 106 221 105 222 0.97 # 148 # 966 # -1 # ID=37_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.514 1_41 - 242 rve PF00665.21 120 1.6e-25 83.8 0.0 1 1 1.9e-26 3.1e-25 82.9 0.0 2 119 106 221 105 222 0.98 # 33585 # 34310 # -1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.525 11_6 - 199 rve PF00665.21 120 1e-24 81.2 0.0 1 1 8.3e-26 1.4e-24 80.8 0.0 2 119 32 147 31 148 0.97 # 4128 # 4724 # -1 # ID=11_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.504 34_3 - 302 rve PF00665.21 120 6.6e-24 78.7 0.1 1 1 8.9e-25 1.5e-23 77.5 0.0 3 119 123 243 121 244 0.96 # 411 # 1316 # 1 # ID=34_3;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.551 5_1 - 193 rve PF00665.21 120 1.1e-14 48.9 0.1 1 1 1e-15 1.7e-14 48.3 0.1 36 118 1 94 1 96 0.94 # 1 # 579 # 1 # ID=5_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.542 18_4 - 74 rve PF00665.21 120 1.2e-13 45.6 0.0 1 1 7.1e-15 1.2e-13 45.6 0.0 57 118 8 68 1 70 0.87 # 1324 # 1545 # -1 # ID=18_4;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.527 48_1 - 190 rve PF00665.21 120 7e-12 39.8 0.0 1 1 8e-13 1.3e-11 38.9 0.0 3 78 118 189 117 190 0.95 # 87 # 656 # 1 # ID=48_1;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 14_1 - 55 rve PF00665.21 120 1.8e-10 35.3 0.1 1 1 1.2e-11 2e-10 35.1 0.1 85 120 1 36 1 36 0.97 # 2 # 166 # 1 # ID=14_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.503 47_4 - 55 rve PF00665.21 120 1.8e-10 35.3 0.1 1 1 1.2e-11 2e-10 35.1 0.1 85 120 1 36 1 36 0.97 # 545 # 709 # -1 # ID=47_4;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.503 11_4 - 132 rve PF00665.21 120 3.8e-10 34.2 0.0 1 1 3.2e-11 5.4e-10 33.7 0.0 41 119 3 81 1 82 0.96 # 3284 # 3679 # -1 # ID=11_4;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.505 50_1 - 135 rve PF00665.21 120 7.9e-10 33.2 0.0 1 1 6.6e-11 1.1e-09 32.7 0.0 21 119 6 103 2 104 0.92 # 3 # 407 # -1 # ID=50_1;partial=10;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.523 67_1 - 83 rve PF00665.21 120 4.9e-06 21.0 0.0 1 1 3.2e-07 5.3e-06 20.9 0.0 36 87 1 50 1 64 0.87 # 6 # 254 # -1 # ID=67_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.518 7_7 - 40 rve PF00665.21 120 0.0013 13.1 0.0 1 1 7.8e-05 0.0013 13.1 0.0 97 117 17 37 5 39 0.88 # 5747 # 5866 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.450 5_3 - 400 YhjQ PF06564.7 244 0.0013 12.3 0.7 1 3 0.076 20 -1.3 0.0 175 199 28 53 2 95 0.53 # 2084 # 3283 # 1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.443 5_3 - 400 YhjQ PF06564.7 244 0.0013 12.3 0.7 2 3 0.038 10 -0.4 0.0 9 46 116 159 110 169 0.63 # 2084 # 3283 # 1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.443 5_3 - 400 YhjQ PF06564.7 244 0.0013 12.3 0.7 3 3 3.7e-05 0.0099 9.5 0.0 106 183 235 311 215 322 0.78 # 2084 # 3283 # 1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.443 9_3 - 363 Glyco_trans_1_2 PF13524.1 92 6.3e-10 33.5 0.0 1 1 4.4e-12 1.2e-09 32.7 0.0 2 91 265 356 263 357 0.95 # 1604 # 2692 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.431 45_1 - 162 Terminase_5 PF06056.7 58 0.00035 14.4 0.1 1 1 3.3e-05 0.0022 11.9 0.0 3 46 30 73 28 84 0.83 # 249 # 734 # 1 # ID=45_1;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.547 10_2 - 99 Terminase_5 PF06056.7 58 0.00064 13.6 0.0 1 1 1.6e-05 0.001 12.9 0.0 14 36 28 50 24 58 0.87 # 375 # 671 # 1 # ID=10_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.455 48_1 - 190 Terminase_5 PF06056.7 58 0.00072 13.4 0.0 1 1 2.3e-05 0.0016 12.3 0.0 9 36 13 40 9 44 0.85 # 87 # 656 # 1 # ID=48_1;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 4_1 - 102 Terminase_5 PF06056.7 58 0.0016 12.3 0.0 1 1 3.2e-05 0.0022 11.9 0.0 17 45 2 30 1 37 0.92 # 199 # 504 # 1 # ID=4_1;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 13_2 - 534 AAA_23 PF13476.1 202 0.067 7.8 8.2 1 1 0.0005 0.13 6.8 8.2 123 197 13 84 2 89 0.47 # 578 # 2179 # 1 # ID=13_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.524 26_2 - 107 AAA_24 PF13479.1 213 0.0014 12.5 0.0 1 1 7.1e-06 0.0019 12.1 0.0 3 23 63 83 61 96 0.82 # 1184 # 1504 # -1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.424 3_1 - 668 Zeta_toxin PF06414.7 201 0.00041 13.8 0.0 1 3 0.092 24 -1.8 0.0 106 127 85 106 80 109 0.86 # 523 # 2526 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.533 3_1 - 668 Zeta_toxin PF06414.7 201 0.00041 13.8 0.0 2 3 2.9e-05 0.0078 9.6 0.0 21 49 122 151 114 179 0.86 # 523 # 2526 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.533 3_1 - 668 Zeta_toxin PF06414.7 201 0.00041 13.8 0.0 3 3 0.025 6.6 0.0 0.0 54 92 215 254 212 274 0.85 # 523 # 2526 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.533 3_5 - 1648 AAA_30 PF13604.1 196 3.4e-44 145.0 13.4 1 2 1.7e-05 0.0022 11.8 3.3 7 146 311 442 307 452 0.84 # 3573 # 8516 # 1 # ID=3_5;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.600 3_5 - 1648 AAA_30 PF13604.1 196 3.4e-44 145.0 13.4 2 2 4.8e-44 6.4e-42 137.6 1.3 1 187 859 1048 859 1052 0.94 # 3573 # 8516 # 1 # ID=3_5;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.600 3_1 - 668 AAA_30 PF13604.1 196 0.0015 12.4 0.0 1 1 2.3e-05 0.0031 11.4 0.0 21 57 120 156 112 162 0.85 # 523 # 2526 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.533 24_3 - 127 HTH_Tnp_1 PF01527.15 76 5.8e-23 75.0 0.0 1 1 7.4e-24 7.9e-23 74.6 0.0 1 70 10 86 10 92 0.86 # 1969 # 2349 # -1 # ID=24_3;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.512 10_3 - 140 HTH_Tnp_1 PF01527.15 76 4.8e-20 65.7 0.1 1 1 6.1e-21 6.5e-20 65.2 0.1 2 49 9 59 8 99 0.81 # 723 # 1142 # 1 # ID=10_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 7_1 - 82 HTH_Tnp_1 PF01527.15 76 9.4e-17 55.1 0.2 1 1 9.8e-18 1.1e-16 55.0 0.2 2 75 3 75 2 76 0.95 # 111 # 356 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.476 6_5 - 105 HTH_Tnp_1 PF01527.15 76 1.3e-13 45.0 1.1 1 1 4.9e-14 5.2e-13 43.1 1.1 1 74 1 87 1 88 0.86 # 6168 # 6482 # 1 # ID=6_5;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 10_8 - 84 HTH_Tnp_1 PF01527.15 76 1.5e-13 44.9 1.0 1 1 1.6e-14 1.7e-13 44.7 1.0 1 76 1 76 1 76 0.94 # 4583 # 4834 # 1 # ID=10_8;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.429 18_2 - 109 HTH_Tnp_1 PF01527.15 76 1.5e-13 44.9 1.1 1 1 5.5e-14 5.9e-13 42.9 1.1 1 74 1 87 1 88 0.86 # 238 # 564 # -1 # ID=18_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.547 35_4 - 109 HTH_Tnp_1 PF01527.15 76 1.5e-13 44.9 1.1 1 1 5.5e-14 5.9e-13 42.9 1.1 1 74 1 87 1 88 0.86 # 894 # 1220 # 1 # ID=35_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 31_2 - 116 HTH_Tnp_1 PF01527.15 76 3.6e-12 40.4 0.4 1 1 1.3e-12 1.4e-11 38.5 0.4 1 75 1 81 1 85 0.78 # 448 # 795 # -1 # ID=31_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 4_1 - 102 HTH_Tnp_1 PF01527.15 76 1.1e-11 38.9 0.0 1 1 1.4e-12 1.5e-11 38.5 0.0 27 69 2 48 1 58 0.83 # 199 # 504 # 1 # ID=4_1;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 13_4 - 62 HTH_Tnp_1 PF01527.15 76 2.2e-11 37.9 0.0 1 1 2.4e-12 2.5e-11 37.7 0.0 5 45 21 61 18 61 0.93 # 3561 # 3746 # 1 # ID=13_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.441 34_1 - 76 HTH_Tnp_1 PF01527.15 76 2.8e-10 34.4 0.0 1 1 3.7e-11 3.9e-10 33.9 0.0 2 40 8 46 7 48 0.93 # 92 # 319 # 1 # ID=34_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.539 15_5 - 100 HTH_Tnp_1 PF01527.15 76 1.2e-09 32.3 3.2 1 1 1.5e-10 1.6e-09 32.0 3.2 2 75 10 78 9 82 0.92 # 2442 # 2741 # 1 # ID=15_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 15_7 - 50 HTH_Tnp_1 PF01527.15 76 6.8e-09 29.9 0.1 1 1 7.1e-10 7.6e-09 29.8 0.1 2 37 3 38 2 40 0.94 # 3144 # 3293 # 1 # ID=15_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.467 36_1 - 96 HTH_Tnp_1 PF01527.15 76 1e-08 29.4 0.0 1 1 1.1e-09 1.2e-08 29.2 0.0 1 48 1 47 1 70 0.93 # 1 # 288 # -1 # ID=36_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.483 37_2 - 80 HTH_Tnp_1 PF01527.15 76 3.7e-08 27.6 0.1 1 1 4.3e-09 4.6e-08 27.3 0.1 21 75 1 54 1 55 0.92 # 1002 # 1241 # -1 # ID=37_2;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.471 6_1 - 73 HTH_Tnp_1 PF01527.15 76 1e-06 22.9 0.2 1 1 4e-07 4.3e-06 20.9 0.2 1 49 1 59 1 70 0.78 # 97 # 315 # -1 # ID=6_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 10_1 - 24 HTH_Tnp_1 PF01527.15 76 5.9e-06 20.5 0.0 1 1 5.6e-07 5.9e-06 20.5 0.0 1 22 1 22 1 24 0.92 # 2 # 73 # -1 # ID=10_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.514 13_1 - 24 HTH_Tnp_1 PF01527.15 76 5.9e-06 20.5 0.0 1 1 5.6e-07 5.9e-06 20.5 0.0 1 22 1 22 1 24 0.92 # 2 # 73 # -1 # ID=13_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.514 65_1 - 24 HTH_Tnp_1 PF01527.15 76 5.9e-06 20.5 0.0 1 1 5.6e-07 5.9e-06 20.5 0.0 1 22 1 22 1 24 0.92 # 182 # 253 # 1 # ID=65_1;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.500 66_1 - 24 HTH_Tnp_1 PF01527.15 76 5.9e-06 20.5 0.0 1 1 5.6e-07 5.9e-06 20.5 0.0 1 22 1 22 1 24 0.92 # 2 # 73 # -1 # ID=66_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.514 14_7 - 20 HTH_Tnp_1 PF01527.15 76 9.4e-06 19.9 0.4 1 1 8.8e-07 9.4e-06 19.9 0.4 2 18 3 19 2 20 0.91 # 3772 # 3831 # 1 # ID=14_7;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.417 14_6 - 56 HTH_Tnp_1 PF01527.15 76 2.4e-05 18.5 0.1 1 1 2.9e-06 3.1e-05 18.2 0.1 1 24 1 24 1 32 0.90 # 3409 # 3576 # -1 # ID=14_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.417 21_1 - 21 HTH_Tnp_1 PF01527.15 76 3.1e-05 18.2 0.1 1 1 2.9e-06 3.1e-05 18.2 0.1 2 19 3 20 2 21 0.89 # 1 # 63 # -1 # ID=21_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.460 25_4 - 21 HTH_Tnp_1 PF01527.15 76 3.1e-05 18.2 0.1 1 1 2.9e-06 3.1e-05 18.2 0.1 2 19 3 20 2 21 0.89 # 2274 # 2336 # 1 # ID=25_4;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.460 59_2 - 67 HTH_Tnp_1 PF01527.15 76 6.8e-05 17.1 0.0 1 1 8.1e-06 8.6e-05 16.8 0.0 35 75 2 41 1 42 0.90 # 129 # 329 # -1 # ID=59_2;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.463 48_1 - 190 GerE PF00196.14 58 6.5e-06 19.7 0.0 1 1 4.4e-08 1.2e-05 18.9 0.0 17 39 16 38 8 40 0.89 # 87 # 656 # 1 # ID=48_1;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 3_1 - 668 TraG-D_C PF12696.2 128 1.8e-20 67.4 0.0 1 1 1.2e-22 3.2e-20 66.6 0.0 1 127 351 473 351 474 0.86 # 523 # 2526 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.533 50_1 - 135 DDE_3 PF13358.1 146 2.7e-18 60.4 0.0 1 1 1.2e-20 3.1e-18 60.2 0.0 33 141 4 112 1 117 0.93 # 3 # 407 # -1 # ID=50_1;partial=10;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.523 5_2 - 260 Bac_DnaA PF00308.13 219 2.8e-09 31.2 0.0 1 1 3e-11 4.1e-09 30.7 0.0 36 136 104 202 74 207 0.83 # 579 # 1358 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 26_2 - 107 Bac_DnaA PF00308.13 219 0.00044 14.2 0.0 1 1 4.1e-06 0.00055 13.9 0.0 37 64 66 93 36 99 0.86 # 1184 # 1504 # -1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.424 5_3 - 400 MipZ PF09140.6 261 3.5e-08 27.1 0.1 1 2 0.0004 0.11 5.8 0.0 2 48 110 161 109 186 0.76 # 2084 # 3283 # 1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.443 5_3 - 400 MipZ PF09140.6 261 3.5e-08 27.1 0.1 2 2 3.8e-08 1e-05 19.0 0.0 88 135 234 281 216 288 0.87 # 2084 # 3283 # 1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.443 32_1 - 443 DDE_Tnp_1 PF01609.16 213 2.6e-29 96.5 0.0 1 1 2.7e-31 3.6e-29 96.1 0.0 4 213 127 352 124 352 0.87 # 86 # 1414 # 1 # ID=32_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.543 42_2 - 169 DDE_Tnp_1 PF01609.16 213 5.9e-24 79.0 0.1 1 1 6.4e-26 8.5e-24 78.5 0.1 27 211 19 164 6 166 0.92 # 282 # 788 # 1 # ID=42_2;partial=01;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.529 9_3 - 363 Glyco_trans_4_2 PF13477.1 139 0.00035 14.7 0.1 1 1 2.6e-06 0.00068 13.8 0.1 16 102 22 106 13 134 0.81 # 1604 # 2692 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.431 1_31 - 96 DivIC PF04977.10 80 0.0023 11.7 3.4 1 1 7.6e-06 0.001 12.9 1.0 12 55 5 48 3 64 0.90 # 27991 # 28278 # 1 # ID=1_31;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.326 24_1 - 513 DivIC PF04977.10 80 0.024 8.5 8.1 1 2 0.0028 0.37 4.7 0.6 18 38 29 49 26 52 0.86 # 38 # 1576 # -1 # ID=24_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.596 24_1 - 513 DivIC PF04977.10 80 0.024 8.5 8.1 2 2 0.00042 0.056 7.3 0.0 21 49 58 86 54 88 0.88 # 38 # 1576 # -1 # ID=24_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.596 7_5 - 195 DDE_Tnp_ISL3 PF01610.12 249 1e-36 121.0 1.7 1 1 1.3e-38 1.2e-36 120.8 1.7 70 247 9 181 4 183 0.94 # 4031 # 4615 # -1 # ID=7_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.523 35_3 - 126 DDE_Tnp_ISL3 PF01610.12 249 3.6e-23 76.7 0.7 1 1 4.4e-25 3.9e-23 76.6 0.7 133 247 2 112 1 114 0.91 # 380 # 757 # -1 # ID=35_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.532 55_2 - 97 DDE_Tnp_ISL3 PF01610.12 249 3e-12 40.9 0.0 1 1 4.5e-14 4e-12 40.5 0.0 58 103 38 85 36 90 0.93 # 116 # 406 # -1 # ID=55_2;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.433 42_2 - 169 DDE_Tnp_1_2 PF13586.1 88 1.8e-27 89.7 1.1 1 1 1.4e-29 1.8e-27 89.7 1.1 1 86 78 165 78 167 0.97 # 282 # 788 # 1 # ID=42_2;partial=01;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.529 22_3 - 77 DDE_Tnp_1_2 PF13586.1 88 6.4e-12 39.9 0.8 1 1 5.4e-14 7.2e-12 39.7 0.8 51 86 35 70 5 72 0.92 # 2203 # 2433 # -1 # ID=22_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.502 5_4 - 327 Trp_repressor PF01371.14 88 0.00063 14.0 0.3 1 1 8.8e-06 0.0024 12.1 0.2 20 69 133 181 128 187 0.77 # 3283 # 4263 # 1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.423 10_2 - 99 Sigma70_r4 PF04545.11 50 5.7e-07 23.1 0.0 1 1 1.3e-08 8.4e-07 22.6 0.0 12 41 19 48 17 54 0.89 # 375 # 671 # 1 # ID=10_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.455 8_4 - 96 Sigma70_r4 PF04545.11 50 0.001 12.7 0.0 1 1 2.7e-05 0.0018 11.9 0.0 8 42 30 68 28 72 0.86 # 1570 # 1857 # 1 # ID=8_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.455 48_1 - 190 Sigma70_r4 PF04545.11 50 0.0013 12.3 0.2 1 1 9.5e-05 0.0064 10.1 0.1 19 39 16 36 7 39 0.89 # 87 # 656 # 1 # ID=48_1;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 2_10 - 41 Sigma70_r4 PF04545.11 50 0.0019 11.8 0.0 1 1 3.4e-05 0.0023 11.6 0.0 11 38 9 36 8 37 0.93 # 11213 # 11335 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.504 1_30 - 431 TIGR00962 TIGR00962 503 7.1e-48 157.4 0.0 1 1 3.4e-50 9.1e-48 157.1 0.0 65 426 54 413 18 425 0.87 # 26555 # 27847 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.391 1_9 - 581 KH_4 PF13083.1 73 0.00037 14.4 0.3 1 2 3.4e-05 0.0091 10.0 0.0 24 64 286 327 273 334 0.80 # 8575 # 10317 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.380 1_9 - 581 KH_4 PF13083.1 73 0.00037 14.4 0.3 2 2 0.019 5.1 1.2 0.1 38 46 432 440 428 441 0.90 # 8575 # 10317 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.380 48_1 - 190 DUF2316 PF10078.4 89 0.00066 14.0 0.0 1 1 4.6e-06 0.0012 13.1 0.0 20 82 14 85 5 91 0.82 # 87 # 656 # 1 # ID=48_1;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 5_2 - 260 AAA PF00004.24 132 5.5e-07 24.1 0.0 1 1 7.4e-09 9.8e-07 23.3 0.0 1 74 105 180 105 213 0.77 # 579 # 1358 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 26_2 - 107 AAA PF00004.24 132 0.00055 14.5 0.0 1 1 7e-06 0.00093 13.7 0.0 1 30 66 95 66 103 0.78 # 1184 # 1504 # -1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.424 48_1 - 190 KorB PF08535.5 93 0.00043 14.7 0.0 1 1 1.7e-05 0.0023 12.4 0.0 2 30 16 44 15 108 0.74 # 87 # 656 # 1 # ID=48_1;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 5_4 - 327 KorB PF08535.5 93 0.00053 14.5 0.1 1 1 1.4e-05 0.0019 12.7 0.0 1 38 159 196 159 233 0.80 # 3283 # 4263 # 1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.423 8_4 - 96 HTH_37 PF13744.1 80 1.6e-09 31.8 0.0 1 1 8.1e-12 2.2e-09 31.4 0.0 19 79 34 93 21 94 0.91 # 1570 # 1857 # 1 # ID=8_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.455 26_2 - 107 TIGR00382 TIGR00382 414 0.0025 10.8 0.0 1 1 9.8e-06 0.0026 10.7 0.0 117 137 63 83 29 96 0.84 # 1184 # 1504 # -1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.424 4_10 - 192 rve_2 PF13333.1 52 2.6e-21 69.8 0.1 1 1 1.1e-22 4.1e-21 69.1 0.1 1 52 134 190 134 190 0.98 # 6522 # 7097 # 1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.531 11_4 - 132 rve_2 PF13333.1 52 3e-16 53.6 0.3 1 1 1.2e-17 4.7e-16 52.9 0.1 1 50 72 127 72 128 0.91 # 3284 # 3679 # -1 # ID=11_4;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.505 11_6 - 199 rve_2 PF13333.1 52 4.4e-15 49.8 1.0 1 1 2e-16 7.8e-15 49.0 1.0 1 51 138 193 138 194 0.93 # 4128 # 4724 # -1 # ID=11_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.504 37_1 - 273 rve_2 PF13333.1 52 2.1e-14 47.7 0.7 1 1 1.1e-15 4.4e-14 46.7 0.7 1 51 212 267 212 267 0.93 # 148 # 966 # -1 # ID=37_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.514 17_4 - 74 rve_2 PF13333.1 52 4.7e-09 30.5 0.0 1 1 1.4e-10 5.5e-09 30.3 0.0 1 44 8 54 8 62 0.88 # 2872 # 3093 # -1 # ID=17_4;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.495 5_7 - 74 rve_2 PF13333.1 52 4.7e-09 30.5 0.0 1 1 1.4e-10 5.5e-09 30.3 0.0 1 44 8 54 8 62 0.88 # 7213 # 7434 # -1 # ID=5_7;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.500 53_1 - 183 rve_2 PF13333.1 52 0.0013 13.1 0.0 1 1 6.2e-05 0.0024 12.3 0.0 1 34 150 183 150 183 0.95 # 3 # 551 # -1 # ID=53_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.554 20_1 - 320 Hydantoinase_A PF01968.13 290 0.00048 13.5 0.2 1 4 0.043 12 -0.8 0.0 82 106 6 30 4 37 0.86 # 1299 # 2258 # 1 # ID=20_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.400 20_1 - 320 Hydantoinase_A PF01968.13 290 0.00048 13.5 0.2 2 4 0.059 16 -1.3 0.0 176 232 106 159 90 168 0.70 # 1299 # 2258 # 1 # ID=20_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.400 20_1 - 320 Hydantoinase_A PF01968.13 290 0.00048 13.5 0.2 3 4 0.00016 0.043 7.1 0.0 73 100 163 189 149 197 0.82 # 1299 # 2258 # 1 # ID=20_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.400 20_1 - 320 Hydantoinase_A PF01968.13 290 0.00048 13.5 0.2 4 4 0.0049 1.3 2.3 0.0 209 268 242 306 195 319 0.63 # 1299 # 2258 # 1 # ID=20_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.400 48_1 - 190 Crp PF00325.15 32 0.0042 10.9 1.6 1 1 1.7e-05 0.0045 10.8 0.1 3 23 18 38 17 39 0.90 # 87 # 656 # 1 # ID=48_1;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 8_4 - 96 HTH_25 PF13413.1 62 4.4e-05 17.4 0.0 1 1 2.8e-07 7.5e-05 16.6 0.0 1 33 37 69 37 75 0.94 # 1570 # 1857 # 1 # ID=8_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.455 3_1 - 668 AAA_16 PF13191.1 185 1e-05 19.9 0.0 1 1 5.2e-07 4.6e-05 17.7 0.0 21 60 114 154 109 194 0.81 # 523 # 2526 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.533 26_2 - 107 AAA_16 PF13191.1 185 0.00016 16.0 0.0 1 1 2.7e-06 0.00024 15.4 0.0 12 41 54 80 42 84 0.75 # 1184 # 1504 # -1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.424 5_2 - 260 AAA_16 PF13191.1 185 0.00038 14.7 1.6 1 1 1.1e-05 0.00099 13.4 0.2 22 41 100 119 87 159 0.79 # 579 # 1358 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 5_2 - 260 AAA_22 PF13401.1 131 4.6e-06 21.1 0.2 1 1 2e-05 0.0018 12.7 0.1 6 28 104 126 99 202 0.64 # 579 # 1358 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_30 - 431 AAA_22 PF13401.1 131 0.00027 15.4 0.0 1 1 3.6e-05 0.0032 11.9 0.0 9 68 157 237 151 280 0.71 # 26555 # 27847 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.391 26_2 - 107 AAA_22 PF13401.1 131 0.00059 14.3 0.1 1 1 1.6e-05 0.0014 13.1 0.0 5 21 64 80 60 99 0.83 # 1184 # 1504 # -1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.424 9_3 - 363 Glyco_trans_1_4 PF13692.1 135 1.1e-13 45.8 0.0 1 1 7e-16 1.9e-13 45.1 0.0 2 135 185 327 184 327 0.86 # 1604 # 2692 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.431 5_2 - 260 TIGR00362 TIGR00362 437 3e-10 33.6 0.0 1 1 2.6e-12 3.5e-10 33.4 0.0 139 240 104 203 27 210 0.85 # 579 # 1358 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 26_2 - 107 TIGR00362 TIGR00362 437 7.5e-05 15.9 0.0 1 1 5.6e-07 7.5e-05 15.9 0.0 139 163 65 89 7 97 0.82 # 1184 # 1504 # -1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.424 26_1 - 262 HTH_AraC PF00165.18 42 1.6e-17 57.1 0.6 1 2 2.2e-06 0.00019 15.5 0.0 2 35 167 201 166 206 0.88 # 457 # 1242 # 1 # ID=26_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.305 26_1 - 262 HTH_AraC PF00165.18 42 1.6e-17 57.1 0.6 2 2 8e-14 7.1e-12 39.2 0.1 7 41 220 255 217 256 0.92 # 457 # 1242 # 1 # ID=26_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.305 1_25 - 211 HTH_AraC PF00165.18 42 2.8e-12 40.4 0.1 1 2 1.1e-09 9.7e-08 26.0 0.0 8 41 113 147 106 148 0.88 # 20659 # 21291 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.327 1_25 - 211 HTH_AraC PF00165.18 42 2.8e-12 40.4 0.1 2 2 2.5e-05 0.0023 12.1 0.0 6 39 161 195 156 196 0.91 # 20659 # 21291 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.327 10_2 - 99 HTH_AraC PF00165.18 42 3e-05 18.1 0.1 1 1 6.6e-07 5.9e-05 17.2 0.1 5 31 24 50 20 52 0.90 # 375 # 671 # 1 # ID=10_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.455 46_2 - 135 Methyltransf_27 PF13708.1 194 0.00048 14.0 0.0 1 1 2.1e-06 0.00055 13.8 0.0 16 69 28 81 13 124 0.84 # 221 # 625 # -1 # ID=46_2;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.420 48_1 - 190 NUMOD1 PF07453.8 37 0.003 11.8 0.0 1 1 2e-05 0.0052 11.0 0.0 20 37 21 38 19 38 0.91 # 87 # 656 # 1 # ID=48_1;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 26_2 - 107 AAA_29 PF13555.1 62 0.0018 12.1 0.0 1 1 1.1e-05 0.003 11.4 0.0 18 39 58 79 50 84 0.77 # 1184 # 1504 # -1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.424 10_8 - 84 LZ_Tnp_IS481 PF13011.1 85 7.1e-06 20.6 0.2 1 1 1.2e-07 1.1e-05 20.0 0.2 20 53 17 50 14 73 0.88 # 4583 # 4834 # 1 # ID=10_8;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.429 36_1 - 96 LZ_Tnp_IS481 PF13011.1 85 0.00032 15.3 0.0 1 1 5.4e-06 0.00048 14.8 0.0 20 48 17 45 14 52 0.89 # 1 # 288 # -1 # ID=36_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.483 10_2 - 99 LZ_Tnp_IS481 PF13011.1 85 0.00034 15.2 0.0 1 1 5.3e-06 0.00047 14.8 0.0 22 55 24 57 18 68 0.90 # 375 # 671 # 1 # ID=10_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.455 26_2 - 107 AAA_28 PF13521.1 163 0.0021 12.3 0.1 1 1 5.3e-05 0.0071 10.6 0.0 1 22 65 86 65 100 0.81 # 1184 # 1504 # -1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.424 5_2 - 260 AAA_28 PF13521.1 163 0.0022 12.2 1.3 1 1 4.3e-05 0.0057 10.9 0.1 1 44 104 152 104 169 0.71 # 579 # 1358 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 42_2 - 169 DDE_Tnp_1_3 PF13612.1 155 3.3e-11 37.4 0.0 1 1 6.4e-13 1.7e-10 35.1 0.0 44 149 25 144 7 149 0.81 # 282 # 788 # 1 # ID=42_2;partial=01;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.529 13_2 - 534 Mnd1 PF03962.10 188 0.0047 10.9 11.5 1 1 2e-06 0.00052 14.0 6.9 63 131 15 86 11 96 0.87 # 578 # 2179 # 1 # ID=13_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.524 45_1 - 162 HTH_32 PF13565.1 77 1.7e-11 39.1 1.0 1 1 4.6e-13 6.2e-11 37.3 0.2 1 77 56 136 56 136 0.88 # 249 # 734 # 1 # ID=45_1;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.547 26_3 - 92 HTH_32 PF13565.1 77 0.00016 16.8 0.1 1 1 1.3e-06 0.00018 16.6 0.1 1 40 17 57 17 83 0.75 # 1841 # 2116 # 1 # ID=26_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.460 38_2 - 88 A2L_zn_ribbon PF08792.5 33 0.00063 13.5 0.0 1 1 4.6e-06 0.0012 12.6 0.0 18 31 65 78 64 79 0.90 # 667 # 930 # -1 # ID=38_2;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.504 10_2 - 99 GntR PF00392.16 64 0.00042 14.1 0.0 1 1 2.2e-06 0.00058 13.6 0.0 17 41 21 44 18 56 0.91 # 375 # 671 # 1 # ID=10_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.455 8_4 - 96 HTH_3 PF01381.17 55 1.3e-13 44.9 0.2 1 1 2.7e-15 2.4e-13 44.1 0.0 1 53 38 90 38 91 0.95 # 1570 # 1857 # 1 # ID=8_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.455 48_1 - 190 HTH_3 PF01381.17 55 3.2e-06 21.2 0.1 1 1 6.7e-08 6e-06 20.4 0.1 7 37 15 45 8 48 0.91 # 87 # 656 # 1 # ID=48_1;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 10_2 - 99 HTH_3 PF01381.17 55 0.0019 12.4 0.0 1 1 3.9e-05 0.0035 11.5 0.0 6 26 22 44 19 48 0.85 # 375 # 671 # 1 # ID=10_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.455 45_1 - 162 HTH_23 PF13384.1 50 1.5e-13 44.3 0.3 1 1 2.1e-13 3.3e-12 40.1 0.1 4 50 27 73 24 73 0.95 # 249 # 734 # 1 # ID=45_1;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.547 10_2 - 99 HTH_23 PF13384.1 50 3.2e-08 27.4 0.0 1 1 3.1e-09 4.8e-08 26.8 0.0 11 46 20 56 18 60 0.87 # 375 # 671 # 1 # ID=10_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.455 48_1 - 190 HTH_23 PF13384.1 50 3.6e-08 27.2 0.2 1 1 5.9e-09 9.2e-08 25.9 0.0 9 40 9 40 2 43 0.90 # 87 # 656 # 1 # ID=48_1;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 10_3 - 140 HTH_23 PF13384.1 50 1.6e-07 25.1 0.0 1 1 1.5e-08 2.4e-07 24.6 0.0 7 45 19 58 15 64 0.90 # 723 # 1142 # 1 # ID=10_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 10_8 - 84 HTH_23 PF13384.1 50 1.2e-06 22.3 0.0 1 1 1.4e-07 2.2e-06 21.5 0.0 7 43 12 48 7 56 0.82 # 4583 # 4834 # 1 # ID=10_8;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.429 36_1 - 96 HTH_23 PF13384.1 50 9.3e-06 19.5 0.0 1 1 8.8e-07 1.4e-05 19.0 0.0 7 40 12 45 7 52 0.82 # 1 # 288 # -1 # ID=36_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.483 6_5 - 105 HTH_23 PF13384.1 50 2.2e-05 18.3 0.3 1 1 3.1e-06 4.8e-05 17.3 0.1 5 42 10 55 8 66 0.86 # 6168 # 6482 # 1 # ID=6_5;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 18_2 - 109 HTH_23 PF13384.1 50 2.4e-05 18.2 0.3 1 1 3.4e-06 5.3e-05 17.1 0.1 5 42 10 55 8 66 0.86 # 238 # 564 # -1 # ID=18_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.547 35_4 - 109 HTH_23 PF13384.1 50 2.4e-05 18.2 0.3 1 1 3.4e-06 5.3e-05 17.1 0.1 5 42 10 55 8 66 0.86 # 894 # 1220 # 1 # ID=35_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 31_2 - 116 HTH_23 PF13384.1 50 3.1e-05 17.9 0.2 1 1 4e-06 6.2e-05 16.9 0.1 5 42 10 55 8 66 0.86 # 448 # 795 # -1 # ID=31_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 4_1 - 102 HTH_23 PF13384.1 50 7.7e-05 16.6 0.0 1 1 6.8e-06 0.00011 16.2 0.0 21 46 2 27 1 31 0.92 # 199 # 504 # 1 # ID=4_1;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 24_3 - 127 HTH_23 PF13384.1 50 0.00015 15.7 0.0 1 1 1.5e-05 0.00024 15.1 0.0 7 44 21 59 16 63 0.91 # 1969 # 2349 # -1 # ID=24_3;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.512 15_5 - 100 HTH_23 PF13384.1 50 0.00056 13.9 0.1 1 1 8.1e-05 0.0013 12.7 0.1 11 41 24 53 22 64 0.85 # 2442 # 2741 # 1 # ID=15_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 2_10 - 41 HTH_23 PF13384.1 50 0.0015 12.6 0.0 1 1 0.00011 0.0017 12.3 0.0 10 35 10 36 6 37 0.87 # 11213 # 11335 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.504 51_1 - 95 HTH_23 PF13384.1 50 0.0016 12.5 0.0 1 1 0.00016 0.0025 11.8 0.0 10 46 10 47 8 48 0.81 # 212 # 496 # 1 # ID=51_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.537 13_4 - 62 HTH_23 PF13384.1 50 0.0019 12.2 0.0 1 1 0.00015 0.0024 11.9 0.0 2 39 23 61 22 61 0.94 # 3561 # 3746 # 1 # ID=13_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.441 5_4 - 327 HTH_23 PF13384.1 50 0.002 12.1 1.2 1 1 0.00042 0.0067 10.5 0.1 9 40 153 184 152 186 0.87 # 3283 # 4263 # 1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.423 48_1 - 190 HTH_7 PF02796.10 45 1.3e-10 35.4 0.2 1 1 2.6e-12 3.5e-10 33.9 0.2 13 44 9 40 5 41 0.93 # 87 # 656 # 1 # ID=48_1;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 5_4 - 327 HTH_7 PF02796.10 45 0.0035 11.5 0.6 1 1 0.00027 0.037 8.3 0.1 13 34 153 174 148 184 0.87 # 3283 # 4263 # 1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.423 8_4 - 96 HTH_19 PF12844.2 64 1.6e-10 35.2 0.0 1 1 3.1e-12 4.2e-10 33.9 0.0 2 55 36 89 35 90 0.92 # 1570 # 1857 # 1 # ID=8_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.455 48_1 - 190 HTH_19 PF12844.2 64 7.2e-05 17.1 0.0 1 1 8.4e-07 0.00011 16.5 0.0 7 52 12 58 11 70 0.83 # 87 # 656 # 1 # ID=48_1;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 4_11 - 72 zinc_ribbon_4 PF13717.1 36 0.0012 12.9 4.3 1 1 9.1e-06 0.0024 11.9 4.3 3 35 6 38 5 39 0.95 # 7437 # 7652 # 1 # ID=4_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 45_1 - 162 HTH_29 PF13551.1 112 1.1e-16 55.3 0.1 1 1 4e-18 1.5e-16 54.8 0.1 1 109 30 137 30 140 0.94 # 249 # 734 # 1 # ID=45_1;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.547 48_1 - 190 HTH_29 PF13551.1 112 4.1e-06 21.2 0.2 1 1 2.3e-07 8.7e-06 20.2 0.2 6 35 12 40 8 95 0.71 # 87 # 656 # 1 # ID=48_1;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 26_3 - 92 HTH_29 PF13551.1 112 1.1e-05 19.9 0.0 1 1 2.8e-07 1.1e-05 19.9 0.0 16 71 5 61 1 86 0.81 # 1841 # 2116 # 1 # ID=26_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.460 10_8 - 84 HTH_29 PF13551.1 112 5e-05 17.8 0.1 1 1 2.1e-06 7.8e-05 17.1 0.1 6 46 17 56 12 75 0.75 # 4583 # 4834 # 1 # ID=10_8;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.429 10_2 - 99 HTH_29 PF13551.1 112 7.6e-05 17.2 0.0 1 1 2.2e-06 8.4e-05 17.0 0.0 7 45 22 60 18 90 0.85 # 375 # 671 # 1 # ID=10_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.455 10_3 - 140 HTH_29 PF13551.1 112 0.0014 13.1 0.0 1 1 4.4e-05 0.0017 12.8 0.0 2 40 20 58 19 102 0.86 # 723 # 1142 # 1 # ID=10_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 36_1 - 96 HTH_29 PF13551.1 112 0.0017 12.8 0.0 1 1 7.9e-05 0.003 12.0 0.0 6 35 17 45 12 50 0.84 # 1 # 288 # -1 # ID=36_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.483 9_3 - 363 Glyco_trans_4_4 PF13579.1 160 3.7e-09 31.2 0.1 1 2 2.8e-09 7.5e-07 23.7 0.0 1 160 13 157 13 157 0.78 # 1604 # 2692 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.431 9_3 - 363 Glyco_trans_4_4 PF13579.1 160 3.7e-09 31.2 0.1 2 2 0.008 2.1 2.7 0.1 83 108 172 196 165 273 0.75 # 1604 # 2692 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.431 2_4 - 754 Plug PF07715.10 108 3.9e-10 34.3 4.8 1 1 1.5e-12 3.9e-10 34.3 4.8 13 107 61 166 43 167 0.89 # 2447 # 4708 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.485 24_1 - 513 DDE_Tnp_IS66 PF03050.9 271 1.6e-103 339.9 0.0 1 1 3.5e-105 1.6e-103 339.9 0.0 1 271 175 462 175 462 0.98 # 38 # 1576 # -1 # ID=24_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.596 13_2 - 534 DDE_Tnp_IS66 PF03050.9 271 3.1e-102 335.7 0.9 1 1 6.9e-104 3.1e-102 335.7 0.9 1 270 197 483 197 484 0.98 # 578 # 2179 # 1 # ID=13_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.524 10_5 - 531 DDE_Tnp_IS66 PF03050.9 271 1.6e-97 320.2 1.7 1 1 7.1e-99 3.1e-97 319.2 0.0 1 271 189 480 189 480 0.98 # 1520 # 3112 # 1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.542 4_3 - 411 DDE_Tnp_IS66 PF03050.9 271 4.1e-59 194.3 7.9 1 3 0.024 1.1 2.7 1.6 159 204 35 83 12 125 0.66 # 871 # 2103 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.560 4_3 - 411 DDE_Tnp_IS66 PF03050.9 271 4.1e-59 194.3 7.9 2 3 4.7e-52 2.1e-50 165.7 0.0 1 140 186 339 186 340 0.97 # 871 # 2103 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.560 4_3 - 411 DDE_Tnp_IS66 PF03050.9 271 4.1e-59 194.3 7.9 3 3 7.3e-11 3.3e-09 30.6 0.3 159 208 334 385 331 394 0.88 # 871 # 2103 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.560 33_1 - 165 DDE_Tnp_IS66 PF03050.9 271 1.6e-08 28.3 0.5 1 2 0.035 1.6 2.2 0.2 180 216 13 53 3 69 0.52 # 224 # 718 # -1 # ID=33_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.549 33_1 - 165 DDE_Tnp_IS66 PF03050.9 271 1.6e-08 28.3 0.5 2 2 5.7e-09 2.5e-07 24.4 0.0 1 30 130 159 130 162 0.93 # 224 # 718 # -1 # ID=33_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.549 23_2 - 84 DDE_Tnp_IS66 PF03050.9 271 0.0011 12.5 0.0 1 1 3.2e-05 0.0014 12.1 0.0 244 270 53 78 51 79 0.88 # 2171 # 2422 # 1 # ID=23_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.433 42_2 - 169 DDE_Tnp_1_7 PF13843.1 351 0.00035 14.0 0.0 1 1 1.4e-06 0.00039 13.8 0.0 155 242 24 109 18 150 0.86 # 282 # 788 # 1 # ID=42_2;partial=01;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.529 1_30 - 431 Arch_ATPase PF01637.13 234 9.8e-05 16.4 0.0 1 1 2.7e-06 0.00024 15.1 0.0 25 129 157 253 140 264 0.65 # 26555 # 27847 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.391 26_2 - 107 Arch_ATPase PF01637.13 234 0.0014 12.6 0.0 1 1 2.1e-05 0.0019 12.2 0.0 7 37 50 80 47 102 0.80 # 1184 # 1504 # -1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.424 5_2 - 260 Arch_ATPase PF01637.13 234 0.0018 12.2 0.1 1 1 8.5e-05 0.0075 10.2 0.0 8 37 90 119 87 140 0.79 # 579 # 1358 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 26_2 - 107 PhoH PF02562.11 205 1.7e-07 24.9 0.0 1 1 3.1e-09 4.1e-07 23.7 0.0 11 51 55 96 44 100 0.77 # 1184 # 1504 # -1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.424 5_2 - 260 PhoH PF02562.11 205 2e-07 24.7 0.1 1 1 4.6e-09 6.1e-07 23.1 0.0 11 51 94 134 84 160 0.84 # 579 # 1358 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 5_2 - 260 AAA_5 PF07728.9 139 6.8e-05 16.9 0.2 1 1 3.4e-06 0.00045 14.2 0.2 1 74 104 173 104 185 0.76 # 579 # 1358 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 26_2 - 107 AAA_5 PF07728.9 139 0.0019 12.2 0.2 1 1 3e-05 0.004 11.2 0.1 1 16 65 80 65 85 0.89 # 1184 # 1504 # -1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.424 5_2 - 260 ResIII PF04851.10 184 0.0011 13.1 0.0 1 2 0.0003 0.04 8.0 0.0 8 48 89 125 82 135 0.72 # 579 # 1358 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 5_2 - 260 ResIII PF04851.10 184 0.0011 13.1 0.0 2 2 0.011 1.4 2.9 0.0 112 164 131 187 125 204 0.72 # 579 # 1358 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 26_2 - 107 ResIII PF04851.10 184 0.0016 12.6 0.0 1 1 1.2e-05 0.0016 12.6 0.0 7 51 49 89 10 103 0.79 # 1184 # 1504 # -1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.424 3_1 - 668 TrwB_AAD_bind PF10412.4 386 6.2e-150 493.3 0.0 1 1 2.8e-152 7.6e-150 493.0 0.0 2 386 104 493 103 493 0.99 # 523 # 2526 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.533 5_3 - 400 TIGR01968 TIGR01968 261 1.1e-06 22.1 0.0 1 2 0.001 0.27 4.5 0.0 4 28 111 135 108 152 0.83 # 2084 # 3283 # 1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.443 5_3 - 400 TIGR01968 TIGR01968 261 1.1e-06 22.1 0.0 2 2 5.1e-07 0.00014 15.3 0.0 102 137 235 270 224 280 0.85 # 2084 # 3283 # 1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.443 42_2 - 169 DDE_Tnp_4 PF13359.1 158 3.5e-10 34.0 0.0 1 1 1.5e-12 3.9e-10 33.8 0.0 57 154 57 161 22 165 0.71 # 282 # 788 # 1 # ID=42_2;partial=01;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.529 32_1 - 443 DDE_Tnp_1_6 PF13751.1 125 0.00028 15.2 0.0 1 1 2.1e-06 0.00056 14.2 0.0 72 124 302 355 275 356 0.84 # 86 # 1414 # 1 # ID=32_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.543 4_11 - 72 HTH_Tnp_IS1 PF12759.2 46 1.8e-08 28.0 0.0 1 1 1.1e-10 2.9e-08 27.3 0.0 1 18 42 59 42 61 0.96 # 7437 # 7652 # 1 # ID=4_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 26_2 - 107 DUF258 PF03193.11 161 1.9e-05 18.2 0.0 1 1 2.7e-07 2.4e-05 17.9 0.0 21 53 49 81 30 99 0.73 # 1184 # 1504 # -1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.424 5_2 - 260 DUF258 PF03193.11 161 7.9e-05 16.2 0.0 1 1 1.3e-06 0.00012 15.6 0.0 22 78 89 157 70 190 0.68 # 579 # 1358 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_30 - 431 DUF258 PF03193.11 161 0.0014 12.1 0.0 1 1 2.9e-05 0.0026 11.2 0.0 34 85 151 202 132 209 0.84 # 26555 # 27847 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.391 9_3 - 363 Glycos_transf_1 PF00534.15 172 1.3e-26 87.3 0.0 1 1 7.9e-29 2.1e-26 86.6 0.0 15 171 185 340 179 341 0.87 # 1604 # 2692 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.431 1_30 - 431 DUF87 PF01935.12 229 0.00029 15.0 0.1 1 1 3.6e-06 0.00096 13.3 0.0 24 47 153 176 152 233 0.90 # 26555 # 27847 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.391 45_1 - 162 HTH_28 PF13518.1 52 3.5e-09 30.8 0.6 1 1 1.6e-09 3.4e-08 27.7 0.1 1 50 29 79 29 84 0.89 # 249 # 734 # 1 # ID=45_1;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.547 26_3 - 92 HTH_28 PF13518.1 52 5.1e-08 27.1 0.1 1 1 3.7e-09 7.5e-08 26.6 0.1 13 48 1 37 1 43 0.91 # 1841 # 2116 # 1 # ID=26_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.460 10_2 - 99 HTH_28 PF13518.1 52 1.3e-07 25.8 0.0 1 1 1e-08 2.1e-07 25.2 0.0 6 43 20 58 18 64 0.83 # 375 # 671 # 1 # ID=10_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.455 48_1 - 190 HTH_28 PF13518.1 52 1.8e-07 25.4 0.1 1 1 1.8e-08 3.7e-07 24.4 0.1 7 34 12 39 8 40 0.89 # 87 # 656 # 1 # ID=48_1;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 10_3 - 140 HTH_28 PF13518.1 52 3.1e-07 24.6 0.1 1 1 2.4e-08 5e-07 24.0 0.1 1 41 18 59 18 63 0.95 # 723 # 1142 # 1 # ID=10_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 10_8 - 84 HTH_28 PF13518.1 52 5.1e-07 23.9 0.0 1 1 4e-08 8.1e-07 23.3 0.0 1 38 10 48 10 58 0.88 # 4583 # 4834 # 1 # ID=10_8;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.429 4_1 - 102 HTH_28 PF13518.1 52 6.8e-06 20.3 0.0 1 1 4.8e-07 9.8e-06 19.8 0.0 16 41 2 27 1 31 0.94 # 199 # 504 # 1 # ID=4_1;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 36_1 - 96 HTH_28 PF13518.1 52 1.3e-05 19.4 0.0 1 1 9.4e-07 1.9e-05 18.9 0.0 1 35 10 45 10 49 0.92 # 1 # 288 # -1 # ID=36_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.483 15_5 - 100 HTH_28 PF13518.1 52 0.00018 15.8 0.3 1 1 1.6e-05 0.00033 15.0 0.3 14 38 31 55 22 56 0.86 # 2442 # 2741 # 1 # ID=15_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 24_3 - 127 HTH_28 PF13518.1 52 0.00032 15.0 0.0 1 1 2.4e-05 0.00049 14.4 0.0 5 39 24 59 20 69 0.81 # 1969 # 2349 # -1 # ID=24_3;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.512 7_1 - 82 HTH_28 PF13518.1 52 0.00053 14.3 0.0 1 1 4.6e-05 0.00094 13.5 0.0 1 40 12 51 12 58 0.88 # 111 # 356 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.476 13_4 - 62 HTH_28 PF13518.1 52 0.00056 14.2 0.0 1 1 3.6e-05 0.00075 13.8 0.0 1 34 27 61 27 61 0.95 # 3561 # 3746 # 1 # ID=13_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.441 5_4 - 327 HTH_28 PF13518.1 52 0.0012 13.1 0.5 1 1 0.00024 0.0049 11.2 0.1 4 34 153 183 152 185 0.87 # 3283 # 4263 # 1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.423 10_2 - 99 HTH_24 PF13412.1 48 4.8e-07 23.4 0.0 1 1 1.4e-08 7.5e-07 22.8 0.0 16 46 26 56 22 56 0.91 # 375 # 671 # 1 # ID=10_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.455 48_1 - 190 HTH_24 PF13412.1 48 5.9e-07 23.2 0.1 1 1 1.9e-08 1e-06 22.4 0.1 10 40 11 40 10 43 0.89 # 87 # 656 # 1 # ID=48_1;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 5_4 - 327 HTH_24 PF13412.1 48 5.3e-06 20.1 0.1 1 1 3.6e-07 1.9e-05 18.3 0.1 14 39 158 183 154 185 0.92 # 3283 # 4263 # 1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.423 1_4 - 310 HTH_24 PF13412.1 48 1.9e-05 18.3 0.1 1 2 1.2e-05 0.00066 13.4 0.0 16 37 147 168 141 171 0.84 # 3119 # 4048 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.338 1_4 - 310 HTH_24 PF13412.1 48 1.9e-05 18.3 0.1 2 2 0.075 4 1.3 0.1 2 17 231 246 230 252 0.79 # 3119 # 4048 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.338 8_4 - 96 HTH_24 PF13412.1 48 3.7e-05 17.4 0.0 1 1 1.2e-06 6.2e-05 16.7 0.0 8 36 37 65 35 66 0.92 # 1570 # 1857 # 1 # ID=8_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.455 26_1 - 262 HTH_18 PF12833.2 81 6.3e-13 43.0 0.0 1 1 9.5e-15 1.3e-12 42.0 0.0 3 78 181 254 179 256 0.92 # 457 # 1242 # 1 # ID=26_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.305 1_25 - 211 HTH_18 PF12833.2 81 1.1e-09 32.7 0.5 1 1 1.6e-11 2.1e-09 31.7 0.1 1 77 120 195 120 198 0.93 # 20659 # 21291 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.327 48_1 - 190 HTH_30 PF13556.1 59 0.00024 15.0 0.0 1 1 2.1e-06 0.00057 13.8 0.0 10 34 15 39 10 43 0.86 # 87 # 656 # 1 # ID=48_1;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 48_1 - 190 HTH_10 PF04967.7 53 0.0018 12.2 0.0 1 1 2.5e-05 0.0034 11.3 0.0 24 45 18 39 15 43 0.89 # 87 # 656 # 1 # ID=48_1;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 10_2 - 99 HTH_10 PF04967.7 53 0.002 12.0 0.0 1 1 2.7e-05 0.0036 11.2 0.0 24 44 28 48 26 53 0.86 # 375 # 671 # 1 # ID=10_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.455 45_1 - 162 HTH_33 PF13592.1 60 3.6e-06 20.8 1.4 1 2 0.072 9.7 0.2 0.0 11 31 16 36 11 40 0.74 # 249 # 734 # 1 # ID=45_1;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.547 45_1 - 162 HTH_33 PF13592.1 60 3.6e-06 20.8 1.4 2 2 1.2e-07 1.6e-05 18.7 0.1 2 52 107 157 106 161 0.95 # 249 # 734 # 1 # ID=45_1;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.547 50_2 - 76 HTH_33 PF13592.1 60 0.00083 13.2 0.0 1 1 8.9e-06 0.0012 12.7 0.0 25 52 10 37 2 44 0.87 # 429 # 656 # -1 # ID=50_2;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.509 4_11 - 72 PhnA_Zn_Ribbon PF08274.7 30 0.00094 13.3 0.2 1 1 6.2e-06 0.0017 12.5 0.2 4 26 7 35 7 36 0.92 # 7437 # 7652 # 1 # ID=4_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 8_4 - 96 HTH_31 PF13560.1 64 4.3e-12 40.4 0.0 1 1 9e-14 6e-12 39.9 0.0 6 57 38 88 34 93 0.94 # 1570 # 1857 # 1 # ID=8_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.455 48_1 - 190 HTH_31 PF13560.1 64 3.9e-05 18.1 0.0 1 1 1.5e-06 9.8e-05 16.8 0.0 12 54 15 60 13 61 0.85 # 87 # 656 # 1 # ID=48_1;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 10_2 - 99 HTH_31 PF13560.1 64 0.00017 16.1 0.0 1 1 3.8e-06 0.00025 15.5 0.0 8 36 21 49 18 75 0.84 # 375 # 671 # 1 # ID=10_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.455 5_4 - 327 HTH_31 PF13560.1 64 0.00038 14.9 2.0 1 1 6.1e-06 0.00041 14.9 0.4 5 52 153 211 149 218 0.78 # 3283 # 4263 # 1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.423 3_5 - 1648 UvrD_C_2 PF13538.1 104 3.1e-07 24.8 0.7 1 2 0.017 4.6 1.8 0.0 6 44 1118 1156 1114 1185 0.76 # 3573 # 8516 # 1 # ID=3_5;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.600 3_5 - 1648 UvrD_C_2 PF13538.1 104 3.1e-07 24.8 0.7 2 2 3.6e-08 9.7e-06 20.0 0.2 3 102 1232 1335 1230 1337 0.77 # 3573 # 8516 # 1 # ID=3_5;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.600 12_5 - 87 Rad60-SLD PF11976.3 72 0.00029 14.8 0.1 1 1 1.5e-06 0.00041 14.3 0.1 12 39 41 68 33 77 0.83 # 3034 # 3294 # -1 # ID=12_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.418 1_25 - 211 HTH_6 PF01418.12 77 0.0008 13.4 0.0 1 1 6.2e-06 0.0017 12.4 0.0 19 59 99 140 81 142 0.85 # 20659 # 21291 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.327 20_1 - 320 StbA PF06406.6 318 2.1e-147 484.4 0.1 1 1 9.2e-150 2.4e-147 484.2 0.1 1 317 2 318 2 319 0.99 # 1299 # 2258 # 1 # ID=20_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 668 AAA_17 PF13207.1 121 0.0007 14.7 0.0 1 1 1.2e-05 0.0016 13.6 0.0 3 28 121 150 119 287 0.73 # 523 # 2526 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.533 26_2 - 107 AAA_17 PF13207.1 121 0.0026 12.9 0.0 1 1 3.4e-05 0.0045 12.1 0.0 2 17 66 81 65 101 0.86 # 1184 # 1504 # -1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.424 24_1 - 513 DZR PF12773.2 50 0.00017 15.7 0.6 1 1 2.5e-06 0.00033 14.8 0.6 10 41 115 166 110 170 0.88 # 38 # 1576 # -1 # ID=24_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.596 33_1 - 165 DZR PF12773.2 50 0.00037 14.6 1.4 1 1 4.9e-06 0.00066 13.8 1.4 8 40 68 120 63 125 0.90 # 224 # 718 # -1 # ID=33_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.549 4_5 - 57 Transposase_mut PF00872.13 381 3.4e-08 26.6 0.0 1 1 2.9e-10 3.8e-08 26.5 0.0 43 97 2 55 1 55 0.84 # 2908 # 3078 # 1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.462 47_2 - 56 Transposase_mut PF00872.13 381 0.00097 12.0 0.3 1 1 7.4e-06 0.00098 12.0 0.3 8 50 9 51 1 54 0.82 # 160 # 327 # -1 # ID=47_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.470 26_2 - 107 AAA_25 PF13481.1 194 4.9e-05 17.1 0.0 1 1 4.7e-07 6.2e-05 16.7 0.0 19 55 48 85 31 90 0.77 # 1184 # 1504 # -1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.424 5_2 - 260 AAA_25 PF13481.1 194 6.2e-05 16.7 0.0 1 1 7.9e-07 0.00011 16.0 0.0 22 58 90 127 71 177 0.79 # 579 # 1358 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_8 - 364 RNA_pol_Rpb2_45 PF10385.4 66 0.00073 13.7 0.2 1 1 9.2e-06 0.0024 12.0 0.2 10 38 294 322 286 332 0.82 # 7464 # 8555 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.383 3_5 - 1648 Viral_helicase1 PF01443.13 234 0.0014 12.5 0.0 1 2 0.00026 0.07 6.9 0.0 1 23 879 902 879 1082 0.75 # 3573 # 8516 # 1 # ID=3_5;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.600 3_5 - 1648 Viral_helicase1 PF01443.13 234 0.0014 12.5 0.0 2 2 0.0045 1.2 2.8 0.0 166 234 1273 1338 1222 1338 0.61 # 3573 # 8516 # 1 # ID=3_5;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.600 5_2 - 260 AAA_14 PF13173.1 128 3.5e-06 21.3 0.0 1 1 2.4e-08 6.5e-06 20.4 0.0 2 96 102 203 101 220 0.67 # 579 # 1358 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 5_3 - 400 VirC1 PF07015.6 231 4e-05 17.0 0.0 1 2 0.0061 1.6 2.0 0.0 6 28 113 135 110 163 0.81 # 2084 # 3283 # 1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.443 5_3 - 400 VirC1 PF07015.6 231 4e-05 17.0 0.0 2 2 3.1e-06 0.00084 12.7 0.0 51 136 210 297 206 344 0.87 # 2084 # 3283 # 1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.443 11_2 - 399 Transposase_20 PF02371.11 87 7.4e-25 81.2 0.2 1 1 3.3e-26 2.9e-24 79.3 0.6 3 86 277 358 275 359 0.95 # 761 # 1957 # 1 # ID=11_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 12_2 - 142 Transposase_20 PF02371.11 87 4.4e-13 43.5 0.3 1 1 9.6e-15 8.6e-13 42.6 0.0 27 87 30 91 28 91 0.97 # 478 # 903 # 1 # ID=12_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.491 35_2 - 80 Transposase_20 PF02371.11 87 2e-07 25.4 0.0 1 1 2.7e-09 2.4e-07 25.1 0.0 13 55 1 42 1 52 0.90 # 47 # 286 # -1 # ID=35_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 10_2 - 99 HTH_Tnp_ISL3 PF13542.1 52 1.2e-05 18.8 0.0 1 1 2.9e-07 1.9e-05 18.1 0.0 28 51 28 51 23 52 0.91 # 375 # 671 # 1 # ID=10_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.455 48_1 - 190 HTH_Tnp_ISL3 PF13542.1 52 2.9e-05 17.5 0.1 1 1 2.3e-06 0.00015 15.2 0.0 20 49 10 39 2 40 0.82 # 87 # 656 # 1 # ID=48_1;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 34_1 - 76 HTH_Tnp_ISL3 PF13542.1 52 0.00063 13.2 0.1 1 1 1.2e-05 0.00083 12.8 0.1 7 41 8 43 8 45 0.93 # 92 # 319 # 1 # ID=34_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.539 10_3 - 140 HTH_Tnp_ISL3 PF13542.1 52 0.0012 12.4 0.0 1 1 5.3e-05 0.0035 10.8 0.0 6 42 8 45 7 47 0.92 # 723 # 1142 # 1 # ID=10_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 1_23 - 136 Sigma70_r1_1 PF03979.9 82 0.002 12.4 0.8 1 1 1.8e-05 0.0047 11.2 0.8 26 60 22 57 19 67 0.84 # 19710 # 20117 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 7_1 - 82 DUF1153 PF06627.6 90 0.00089 13.4 0.0 1 1 3.7e-06 0.00099 13.3 0.0 28 75 3 50 1 69 0.91 # 111 # 356 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.476 34_1 - 76 CENP-B_N PF04218.8 53 1.7e-05 18.5 0.0 1 1 2.6e-07 2.3e-05 18.1 0.0 3 48 9 55 8 58 0.86 # 92 # 319 # 1 # ID=34_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.539 13_4 - 62 CENP-B_N PF04218.8 53 2.2e-05 18.1 0.1 1 1 3e-07 2.7e-05 17.9 0.1 8 44 24 61 19 61 0.87 # 3561 # 3746 # 1 # ID=13_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.441 48_1 - 190 CENP-B_N PF04218.8 53 0.00024 14.8 0.1 1 1 4.9e-06 0.00043 14.0 0.1 20 47 15 42 2 43 0.83 # 87 # 656 # 1 # ID=48_1;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 3_1 - 668 T4SS-DNA_transf PF02534.9 469 1.3e-09 31.4 0.0 1 1 1.6e-11 4.3e-09 29.7 0.0 264 362 314 409 130 433 0.82 # 523 # 2526 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.533 5_2 - 260 NTPase_1 PF03266.10 168 0.00067 13.7 0.1 1 2 0.0026 0.69 3.9 0.1 2 26 105 129 104 138 0.74 # 579 # 1358 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 5_2 - 260 NTPase_1 PF03266.10 168 0.00067 13.7 0.1 2 2 0.00019 0.052 7.5 0.0 88 113 157 182 143 204 0.72 # 579 # 1358 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 48_1 - 190 GcrA PF07750.6 162 0.00025 15.6 0.0 1 1 1.3e-06 0.00034 15.1 0.0 6 36 5 34 2 87 0.93 # 87 # 656 # 1 # ID=48_1;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 36_2 - 98 DDE_Tnp_IS1 PF03400.8 131 6.8e-51 166.1 0.4 1 1 8.3e-53 7.4e-51 166.0 0.4 35 131 1 97 1 97 0.99 # 883 # 1176 # -1 # ID=36_2;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.517 63_1 - 91 DDE_Tnp_IS1 PF03400.8 131 4.7e-44 143.9 0.3 1 1 5.9e-46 5.3e-44 143.8 0.3 1 81 11 91 11 91 0.99 # 2 # 274 # 1 # ID=63_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.568 17_1 - 83 DDE_Tnp_IS1 PF03400.8 131 7e-18 59.3 0.1 1 1 1.1e-19 9.3e-18 58.9 0.1 1 33 37 69 37 76 0.92 # 83 # 331 # -1 # ID=17_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.542 1_30 - 431 TIGR01039 TIGR01039 462 1.5e-51 169.6 0.0 1 1 7e-54 1.9e-51 169.2 0.0 7 408 15 413 13 426 0.89 # 26555 # 27847 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.391 4_11 - 72 zinc_ribbon_5 PF13719.1 37 0.00098 13.0 4.3 1 1 8.3e-06 0.0022 11.9 4.3 3 36 6 39 5 40 0.94 # 7437 # 7652 # 1 # ID=4_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 9_3 - 363 Glyco_transf_4 PF13439.1 177 6.3e-07 23.6 0.0 1 1 1.3e-08 3.6e-06 21.1 0.0 4 172 5 159 2 163 0.62 # 1604 # 2692 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.431 26_2 - 107 Ras PF00071.17 162 0.0021 11.7 0.0 1 1 1.3e-05 0.0036 11.0 0.0 2 28 66 92 65 104 0.85 # 1184 # 1504 # -1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.424 4_10 - 192 DDE_Tnp_IS240 PF13610.1 140 6.2e-11 36.7 0.0 1 1 1.9e-12 8.4e-11 36.3 0.0 2 129 33 163 32 175 0.86 # 6522 # 7097 # 1 # ID=4_10;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.531 11_6 - 199 DDE_Tnp_IS240 PF13610.1 140 1.8e-07 25.5 0.0 1 1 5.2e-09 2.3e-07 25.1 0.0 2 139 37 178 36 179 0.87 # 4128 # 4724 # -1 # ID=11_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.504 53_1 - 183 DDE_Tnp_IS240 PF13610.1 140 1.9e-07 25.4 0.0 1 1 5.2e-09 2.3e-07 25.1 0.0 2 129 50 179 49 183 0.90 # 3 # 551 # -1 # ID=53_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.554 37_1 - 273 DDE_Tnp_IS240 PF13610.1 140 5.7e-07 23.9 0.0 1 1 2.1e-08 9.5e-07 23.2 0.0 2 139 111 252 110 253 0.86 # 148 # 966 # -1 # ID=37_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.514 39_2 - 167 DDE_Tnp_IS240 PF13610.1 140 9.1e-06 20.0 0.0 1 1 2.5e-07 1.1e-05 19.7 0.0 2 113 50 164 49 167 0.90 # 389 # 889 # 1 # ID=39_2;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_41 - 242 DDE_Tnp_IS240 PF13610.1 140 2.3e-05 18.7 0.0 1 1 8.7e-07 3.9e-05 17.9 0.0 2 120 111 232 110 239 0.88 # 33585 # 34310 # -1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.525 8_4 - 96 HTH_26 PF13443.1 63 1.1e-07 26.3 0.0 1 1 1.3e-09 1.7e-07 25.7 0.0 5 55 41 90 37 91 0.90 # 1570 # 1857 # 1 # ID=8_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.455 48_1 - 190 HTH_26 PF13443.1 63 5.1e-06 20.9 0.0 1 1 7.4e-08 9.9e-06 20.0 0.0 4 41 11 48 10 58 0.90 # 87 # 656 # 1 # ID=48_1;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 10_8 - 84 HTH_17 PF12728.2 51 0.00032 15.2 0.0 1 1 5.2e-06 0.00046 14.7 0.0 2 24 23 45 23 74 0.82 # 4583 # 4834 # 1 # ID=10_8;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.429 36_1 - 96 HTH_17 PF12728.2 51 0.0006 14.4 0.0 1 1 9.5e-06 0.00085 13.9 0.0 2 27 23 50 23 69 0.85 # 1 # 288 # -1 # ID=36_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.483 48_1 - 190 HTH_17 PF12728.2 51 0.0022 12.6 0.1 1 1 6.5e-05 0.0058 11.2 0.1 6 26 22 43 18 86 0.88 # 87 # 656 # 1 # ID=48_1;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 4_11 - 72 Zn-ribbon_8 PF09723.5 42 0.00095 13.4 6.4 1 2 0.00012 0.032 8.5 0.1 28 40 7 19 2 21 0.88 # 7437 # 7652 # 1 # ID=4_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 4_11 - 72 Zn-ribbon_8 PF09723.5 42 0.00095 13.4 6.4 2 2 0.00042 0.11 6.8 2.3 6 16 29 39 28 49 0.89 # 7437 # 7652 # 1 # ID=4_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 4_11 - 72 Zn_Tnp_IS1595 PF12760.2 46 7.3e-06 20.1 5.6 1 1 3.9e-08 1.1e-05 19.6 5.6 19 45 6 36 3 37 0.94 # 7437 # 7652 # 1 # ID=4_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 48_1 - 190 HTH_11 PF08279.7 55 4.4e-06 20.6 0.1 1 1 9.4e-08 1.3e-05 19.1 0.1 7 37 11 39 5 40 0.80 # 87 # 656 # 1 # ID=48_1;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 10_2 - 99 HTH_11 PF08279.7 55 0.00036 14.5 0.0 1 1 4.9e-06 0.00065 13.6 0.0 14 33 26 45 18 56 0.84 # 375 # 671 # 1 # ID=10_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.455 10_2 - 99 MarR_2 PF12802.2 62 3.4e-06 21.0 0.1 1 1 4.4e-08 5.8e-06 20.2 0.1 18 49 24 55 18 57 0.84 # 375 # 671 # 1 # ID=10_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.455 8_4 - 96 MarR_2 PF12802.2 62 7e-06 20.0 0.0 1 1 7.8e-08 1e-05 19.4 0.0 8 41 35 66 31 66 0.91 # 1570 # 1857 # 1 # ID=8_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.455 4_11 - 72 Elf1 PF05129.8 81 8.2e-05 16.6 0.9 1 1 3.5e-07 9.2e-05 16.4 0.9 21 59 4 41 1 59 0.80 # 7437 # 7652 # 1 # ID=4_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 48_1 - 190 TrmB PF01978.14 68 0.00079 13.4 0.0 1 1 6.5e-06 0.0017 12.4 0.0 16 44 11 39 10 40 0.93 # 87 # 656 # 1 # ID=48_1;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 6_5 - 105 Phage_terminase PF10668.4 60 0.0012 12.9 0.0 1 1 3.2e-05 0.0021 12.2 0.0 9 45 12 53 5 69 0.80 # 6168 # 6482 # 1 # ID=6_5;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 18_2 - 109 Phage_terminase PF10668.4 60 0.0013 12.8 0.0 1 1 3.5e-05 0.0023 12.0 0.0 9 45 12 53 5 69 0.80 # 238 # 564 # -1 # ID=18_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.547 35_4 - 109 Phage_terminase PF10668.4 60 0.0013 12.8 0.0 1 1 3.5e-05 0.0023 12.0 0.0 9 45 12 53 5 69 0.80 # 894 # 1220 # 1 # ID=35_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 31_2 - 116 Phage_terminase PF10668.4 60 0.0016 12.6 0.0 1 1 4.2e-05 0.0028 11.8 0.0 9 45 12 53 5 68 0.80 # 448 # 795 # -1 # ID=31_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 48_1 - 190 DUF1670 PF07900.6 220 0.0017 11.9 0.0 1 1 1.1e-05 0.0028 11.1 0.0 189 219 9 39 4 40 0.92 # 87 # 656 # 1 # ID=48_1;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 3_1 - 668 AAA_10 PF12846.2 304 2.8e-10 34.3 0.0 1 1 7.2e-11 4.8e-09 30.3 0.0 3 296 119 426 118 432 0.70 # 523 # 2526 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.533 5_2 - 260 AAA_10 PF12846.2 304 2e-05 18.4 0.4 1 1 3.5e-06 0.00023 14.9 0.0 1 33 102 134 102 172 0.87 # 579 # 1358 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_30 - 431 AAA_10 PF12846.2 304 0.0003 14.5 0.1 1 1 1.4e-05 0.00091 13.0 0.1 5 52 156 209 153 424 0.72 # 26555 # 27847 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.391 26_2 - 107 AAA_10 PF12846.2 304 0.00049 13.9 0.1 1 2 0.085 5.7 0.5 0.1 130 169 2 43 1 57 0.66 # 1184 # 1504 # -1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.424 26_2 - 107 AAA_10 PF12846.2 304 0.00049 13.9 0.1 2 2 3.8e-05 0.0025 11.5 0.0 1 24 63 86 63 94 0.86 # 1184 # 1504 # -1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.424 48_1 - 190 HTH_20 PF12840.2 61 0.00068 13.7 0.0 1 1 5.7e-06 0.0015 12.6 0.0 19 46 13 39 10 40 0.89 # 87 # 656 # 1 # ID=48_1;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 5_3 - 400 ArsA_ATPase PF02374.10 305 0.0015 11.9 0.0 1 2 2.4e-05 0.0065 9.8 0.0 5 42 112 156 109 173 0.74 # 2084 # 3283 # 1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.443 5_3 - 400 ArsA_ATPase PF02374.10 305 0.0015 11.9 0.0 2 2 0.068 18 -1.6 0.0 124 136 242 254 222 255 0.81 # 2084 # 3283 # 1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.443 5_3 - 400 AAA_31 PF13614.1 157 1.4e-07 25.9 0.1 1 2 0.00019 0.052 7.8 0.0 3 44 111 158 109 210 0.86 # 2084 # 3283 # 1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.443 5_3 - 400 AAA_31 PF13614.1 157 1.4e-07 25.9 0.1 2 2 7e-07 0.00019 15.7 0.0 108 148 235 274 233 279 0.87 # 2084 # 3283 # 1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.443 1_11 - 209 MULE PF10551.4 93 0.00021 15.7 0.1 1 1 1.5e-06 0.0004 14.9 0.1 31 79 74 123 48 137 0.86 # 10848 # 11474 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.340 5_2 - 260 IstB_IS21 PF01695.12 178 3.4e-69 226.1 0.1 1 1 8.1e-71 7.2e-69 225.0 0.1 1 178 56 235 56 235 0.98 # 579 # 1358 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 26_2 - 107 IstB_IS21 PF01695.12 178 1.2e-25 84.3 0.0 1 1 1.6e-27 1.4e-25 84.0 0.0 1 74 17 90 17 101 0.94 # 1184 # 1504 # -1 # ID=26_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.424 7_8 - 96 IstB_IS21 PF01695.12 178 1.8e-15 51.1 0.0 1 1 2.8e-17 2.4e-15 50.6 0.0 134 174 42 82 36 85 0.92 # 6017 # 6304 # -1 # ID=7_8;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.406 3_5 - 1648 AAA_11 PF13086.1 236 0.00032 14.6 1.9 1 1 2.6e-06 0.00068 13.5 0.0 2 75 860 930 859 950 0.80 # 3573 # 8516 # 1 # ID=3_5;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.600 10_3 - 140 BrkDBD PF09607.5 58 0.0012 12.7 0.1 1 1 9e-06 0.0024 11.8 0.1 2 47 10 52 9 58 0.79 # 723 # 1142 # 1 # ID=10_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 54_2 - 121 HTH_21 PF13276.1 60 3.4e-19 63.0 3.5 1 1 3.1e-20 7e-19 62.0 3.5 2 60 47 104 45 104 0.94 # 135 # 497 # 1 # ID=54_2;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.556 40_1 - 120 HTH_21 PF13276.1 60 1.3e-18 61.1 2.9 1 1 1.3e-19 2.9e-18 60.0 2.9 2 60 46 103 44 103 0.94 # 2 # 361 # -1 # ID=40_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.553 34_3 - 302 HTH_21 PF13276.1 60 1.6e-18 60.8 2.0 1 2 3.3e-18 7.3e-17 55.5 0.6 6 57 49 106 45 109 0.79 # 411 # 1316 # 1 # ID=34_3;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.551 34_3 - 302 HTH_21 PF13276.1 60 1.6e-18 60.8 2.0 2 2 0.038 0.85 4.0 0.0 11 33 264 288 255 301 0.77 # 411 # 1316 # 1 # ID=34_3;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.551 11_5 - 81 HTH_21 PF13276.1 60 1.3e-16 54.7 2.9 1 1 7.8e-18 1.7e-16 54.3 2.9 12 60 4 51 2 51 0.94 # 3761 # 4003 # -1 # ID=11_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.498 33_2 - 120 HTH_21 PF13276.1 60 9.2e-12 39.2 4.4 1 1 5.8e-13 1.3e-11 38.7 4.4 3 59 27 82 23 83 0.89 # 768 # 1127 # -1 # ID=33_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 15_6 - 115 HTH_21 PF13276.1 60 1.3e-11 38.7 1.1 1 1 7.6e-13 1.7e-11 38.3 0.1 10 59 54 102 42 103 0.89 # 2738 # 3082 # 1 # ID=15_6;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.594 1_41 - 242 HTH_21 PF13276.1 60 2.8e-11 37.6 4.4 1 1 2.5e-12 5.6e-11 36.6 4.4 3 59 27 82 23 83 0.89 # 33585 # 34310 # -1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.525 37_1 - 273 HTH_21 PF13276.1 60 3.3e-11 37.4 5.4 1 1 3.7e-12 8.3e-11 36.1 5.4 3 59 27 82 23 83 0.89 # 148 # 966 # -1 # ID=37_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.514 18_1 - 79 HTH_21 PF13276.1 60 6.7e-09 30.0 0.9 1 1 5.1e-10 1.1e-08 29.2 0.6 2 34 46 78 44 79 0.90 # 2 # 238 # -1 # ID=18_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 27_1 - 108 HTH_21 PF13276.1 60 6e-07 23.7 0.5 1 2 5.2e-06 0.00012 16.4 0.3 38 60 1 23 1 23 0.93 # 3 # 326 # 1 # ID=27_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.593 27_1 - 108 HTH_21 PF13276.1 60 6e-07 23.7 0.5 2 2 0.016 0.36 5.2 0.0 20 31 89 100 74 102 0.81 # 3 # 326 # 1 # ID=27_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.593 58_1 - 74 HTH_21 PF13276.1 60 3.6e-05 18.0 0.1 1 1 2.3e-06 5.2e-05 17.5 0.1 3 38 38 72 34 73 0.81 # 2 # 223 # 1 # ID=58_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.514 53_1 - 183 HTH_21 PF13276.1 60 0.00011 16.5 0.3 1 1 1.2e-05 0.00026 15.3 0.3 38 60 1 23 1 23 0.93 # 3 # 551 # -1 # ID=53_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.554 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/a7f23720-b781-4eae-a707-ba96d1c8d8dd # Target file: checkm_output/bins/pm278/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm278/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/a7f23720-b781-4eae-a707-ba96d1c8d8dd checkm_output/bins/pm278/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:01:35 2017 # [ok]