# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 9_2 - 109 HTH_IclR PF09339.5 52 1.7e-05 18.9 0.0 1 1 1e-07 3.3e-05 18.0 0.0 17 40 79 102 70 103 0.92 # 159 # 485 # 1 # ID=9_2;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 2_6 - 598 ABC_tran PF00005.22 137 9.9e-05 17.3 0.0 1 1 1.9e-06 0.00031 15.7 0.0 6 38 17 49 13 194 0.61 # 5766 # 7559 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.378 3_80 - 164 ABC_tran PF00005.22 137 0.0013 13.7 0.0 1 1 9.6e-06 0.0016 13.4 0.0 14 42 35 64 26 115 0.80 # 47217 # 47708 # 1 # ID=3_80;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.443 9_2 - 109 HTH_22 PF13309.1 64 3.7e-05 18.1 0.0 1 2 0.066 11 0.5 0.0 19 42 40 63 28 67 0.84 # 159 # 485 # 1 # ID=9_2;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 9_2 - 109 HTH_22 PF13309.1 64 3.7e-05 18.1 0.0 2 2 1.9e-06 0.00032 15.1 0.0 45 63 83 101 79 102 0.87 # 159 # 485 # 1 # ID=9_2;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 5_2 - 186 HTH_22 PF13309.1 64 3.8e-05 18.0 0.0 1 1 1.5e-06 0.00025 15.4 0.0 47 64 166 183 163 183 0.94 # 765 # 1322 # 1 # ID=5_2;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.611 12_3 - 211 TIGR01173 TIGR01173 452 1.5e-09 31.5 0.1 1 1 1.3e-11 2.1e-09 30.9 0.1 390 446 109 165 100 170 0.87 # 1164 # 1796 # 1 # ID=12_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.494 11_1 - 211 TIGR01173 TIGR01173 452 1.6e-07 24.7 0.1 1 1 1.4e-09 2.3e-07 24.3 0.1 391 440 110 159 104 170 0.87 # 184 # 816 # -1 # ID=11_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.498 2_3 - 578 ThiF PF00899.16 136 2.2e-19 64.2 0.0 1 1 2.2e-21 3.6e-19 63.5 0.0 2 128 320 447 319 455 0.90 # 1984 # 3717 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.429 3_84 - 743 ThiF PF00899.16 136 5.1e-12 40.4 0.0 1 1 7.3e-14 1.2e-11 39.2 0.0 6 107 371 474 367 490 0.87 # 49524 # 51752 # -1 # ID=3_84;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.445 4_2 - 71 DUF2116 PF09889.4 59 0.0055 11.1 5.7 1 1 0.00073 0.24 5.9 5.7 6 35 14 54 12 60 0.75 # 632 # 844 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.601 2_10 - 360 rve_3 PF13683.1 67 7.6e-18 58.5 0.2 1 1 8.8e-20 1.5e-17 57.6 0.2 2 67 260 328 259 328 0.98 # 11464 # 12543 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.481 4_26 - 205 rve_3 PF13683.1 67 2.3e-12 40.9 0.0 1 1 2.2e-14 3.7e-12 40.2 0.0 2 67 124 190 123 190 0.96 # 18480 # 19094 # -1 # ID=4_26;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.470 1_21 - 351 Sigma54_activat PF00158.21 168 0.00024 15.2 0.0 1 1 1.3e-05 0.0044 11.1 0.0 21 120 100 194 83 225 0.73 # 15573 # 16625 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.385 2_26 - 709 FtsK_SpoIIIE PF01580.13 205 0.00012 16.2 0.2 1 2 5.1e-06 0.0017 12.4 0.0 33 80 205 251 175 257 0.82 # 23449 # 25575 # -1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.462 2_26 - 709 FtsK_SpoIIIE PF01580.13 205 0.00012 16.2 0.2 2 2 0.016 5.4 1.0 0.1 175 204 527 556 514 557 0.85 # 23449 # 25575 # -1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.462 2_6 - 598 DUF1205 PF06722.7 97 0.0027 12.6 0.0 1 2 0.00011 0.037 8.9 0.0 31 96 340 405 314 406 0.85 # 5766 # 7559 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.378 2_6 - 598 DUF1205 PF06722.7 97 0.0027 12.6 0.0 2 2 0.039 13 0.8 0.0 55 85 491 521 466 528 0.76 # 5766 # 7559 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.378 17_1 - 344 HTH_38 PF13936.1 44 9.9e-05 16.5 0.1 1 1 1.6e-06 0.00027 15.1 0.1 10 41 30 61 27 62 0.92 # 105 # 1136 # 1 # ID=17_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.516 9_2 - 109 HTH_38 PF13936.1 44 0.00033 14.8 0.1 1 1 5.9e-06 0.00098 13.3 0.0 17 41 76 101 71 103 0.86 # 159 # 485 # 1 # ID=9_2;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 2_3 - 578 2-Hacid_dh_C PF02826.14 178 0.00038 14.2 0.0 1 1 2.2e-06 0.00073 13.3 0.0 28 69 312 354 302 373 0.84 # 1984 # 3717 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.429 4_5 - 561 FAD_oxidored PF12831.2 428 9.3e-06 19.5 3.1 1 2 2.8e-08 9.3e-06 19.5 3.1 2 41 100 138 99 168 0.84 # 1526 # 3208 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 4_5 - 561 FAD_oxidored PF12831.2 428 9.3e-06 19.5 3.1 2 2 0.013 4.3 0.8 0.0 85 120 305 340 258 364 0.64 # 1526 # 3208 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 1_25 - 600 UvrD-helicase PF00580.16 315 2.1e-32 107.2 2.0 1 2 1.9e-15 6.3e-13 43.2 0.0 2 109 5 95 4 127 0.88 # 19372 # 21171 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.427 1_25 - 600 UvrD-helicase PF00580.16 315 2.1e-32 107.2 2.0 2 2 1.6e-21 5.3e-19 63.2 0.6 211 314 148 248 135 249 0.90 # 19372 # 21171 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.427 1_8 - 108 60KD_IMP PF02096.15 198 0.002 12.4 0.1 1 2 2.6e-05 0.0085 10.3 0.0 120 173 3 59 1 68 0.77 # 5963 # 6286 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.441 1_8 - 108 60KD_IMP PF02096.15 198 0.002 12.4 0.1 2 2 0.035 12 0.1 0.1 135 137 86 88 64 107 0.45 # 5963 # 6286 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.441 9_3 - 491 HTH_Tnp_4 PF13613.1 53 0.0011 13.2 0.2 1 2 4e-05 0.013 9.6 0.0 26 43 38 55 35 57 0.87 # 469 # 1941 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 9_3 - 491 HTH_Tnp_4 PF13613.1 53 0.0011 13.2 0.2 2 2 0.027 8.8 0.6 0.1 32 43 128 139 126 140 0.90 # 469 # 1941 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 4_5 - 561 Pyr_redox_3 PF13738.1 203 1.1e-17 59.3 0.1 1 2 2.1e-14 7e-12 40.4 0.1 1 201 101 303 101 305 0.73 # 1526 # 3208 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 4_5 - 561 Pyr_redox_3 PF13738.1 203 1.1e-17 59.3 0.1 2 2 4.5e-07 0.00015 16.5 0.0 89 147 316 371 308 429 0.82 # 1526 # 3208 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 4_5 - 561 NAD_binding_7 PF13241.1 103 1.4e-06 23.1 1.2 1 2 1.8e-05 0.003 12.5 0.1 6 39 96 129 94 185 0.88 # 1526 # 3208 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 4_5 - 561 NAD_binding_7 PF13241.1 103 1.4e-06 23.1 1.2 2 2 0.00021 0.035 9.0 0.1 8 41 270 306 263 381 0.73 # 1526 # 3208 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 2_3 - 578 NAD_binding_7 PF13241.1 103 0.00024 16.0 0.0 1 1 3.2e-06 0.00052 14.9 0.0 5 79 318 428 316 442 0.67 # 1984 # 3717 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.429 9_2 - 109 HTH_8 PF02954.14 42 0.00033 14.8 0.1 1 1 2.5e-06 0.00084 13.5 0.1 24 42 86 104 82 104 0.89 # 159 # 485 # 1 # ID=9_2;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 2_26 - 709 DUF853 PF05872.7 504 1.3e-05 18.3 0.0 1 1 8.8e-08 2.9e-05 17.1 0.0 12 60 204 252 195 260 0.87 # 23449 # 25575 # -1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.462 8_4 - 195 TetR_N PF00440.18 47 1.1e-07 26.0 0.0 1 1 1.3e-09 2.1e-07 25.1 0.0 2 46 13 57 12 58 0.95 # 2336 # 2920 # 1 # ID=8_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.609 9_2 - 109 TetR_N PF00440.18 47 0.0016 12.7 0.1 1 1 1.8e-05 0.003 11.8 0.1 14 35 78 99 70 101 0.84 # 159 # 485 # 1 # ID=9_2;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 1_25 - 600 AAA_19 PF13245.1 76 2.1e-06 22.1 0.0 1 1 1.2e-08 4.1e-06 21.1 0.0 10 75 17 86 9 87 0.79 # 19372 # 21171 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.427 1_60 - 416 CbiA PF01656.18 195 1.1e-23 78.2 0.1 1 1 5.4e-26 1.8e-23 77.6 0.1 1 190 117 359 117 364 0.74 # 56848 # 58095 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.385 1_61 - 337 Sigma70_r4_2 PF08281.7 54 1.6e-07 25.4 0.2 1 3 0.0065 2.2 2.5 0.0 15 35 84 104 76 106 0.89 # 58095 # 59105 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_61 - 337 Sigma70_r4_2 PF08281.7 54 1.6e-07 25.4 0.2 2 3 8e-07 0.00027 15.0 0.0 22 51 169 198 167 200 0.87 # 58095 # 59105 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_61 - 337 Sigma70_r4_2 PF08281.7 54 1.6e-07 25.4 0.2 3 3 0.0031 1 3.5 0.0 15 41 307 333 305 336 0.88 # 58095 # 59105 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.393 4_26 - 205 rve PF00665.21 120 3.4e-29 96.0 0.0 1 1 8.9e-31 4.9e-29 95.5 0.0 2 120 36 152 35 152 0.97 # 18480 # 19094 # -1 # ID=4_26;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.470 2_10 - 360 rve PF00665.21 120 5.3e-22 72.8 0.0 1 1 1.7e-23 9.2e-22 72.0 0.0 3 120 176 288 174 288 0.92 # 11464 # 12543 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.481 19_1 - 235 rve PF00665.21 120 1.1e-12 42.7 0.1 1 2 0.089 4.9 1.9 0.0 78 102 27 49 6 54 0.84 # 46 # 750 # 1 # ID=19_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 19_1 - 235 rve PF00665.21 120 1.1e-12 42.7 0.1 2 2 3.6e-13 2e-11 38.7 0.0 9 119 75 182 70 183 0.89 # 46 # 750 # 1 # ID=19_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 9_3 - 491 rve PF00665.21 120 2.4e-12 41.6 0.0 1 1 1.1e-13 6.1e-12 40.3 0.0 2 118 157 298 156 300 0.89 # 469 # 1941 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 17_1 - 344 rve PF00665.21 120 2.1e-09 32.1 0.0 1 1 8.5e-11 4.7e-09 31.0 0.0 18 119 204 306 188 307 0.87 # 105 # 1136 # 1 # ID=17_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.516 6_3 - 246 rve PF00665.21 120 0.002 12.8 0.0 1 1 5.3e-05 0.0029 12.3 0.0 4 96 53 153 50 166 0.76 # 3023 # 3760 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.577 1_60 - 416 YhjQ PF06564.7 244 0.00021 15.3 0.3 1 2 8.2e-05 0.027 8.4 0.1 4 44 117 160 115 168 0.73 # 56848 # 58095 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.385 1_60 - 416 YhjQ PF06564.7 244 0.00021 15.3 0.3 2 2 0.0012 0.39 4.6 0.0 113 147 255 288 229 300 0.83 # 56848 # 58095 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.385 2_6 - 598 AAA_23 PF13476.1 202 8e-11 37.2 4.8 1 1 2.4e-13 8e-11 37.2 4.8 2 156 6 219 5 272 0.43 # 5766 # 7559 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.378 1_21 - 351 DNA_pol3_delta2 PF13177.1 162 0.0017 12.6 0.0 1 1 1.2e-05 0.004 11.4 0.0 10 96 92 185 84 200 0.71 # 15573 # 16625 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.385 3_32 - 415 Methyltransf_26 PF13659.1 117 2.4e-05 19.0 0.0 1 2 1.3e-06 0.00043 14.9 0.0 59 114 117 179 35 182 0.73 # 16578 # 17822 # 1 # ID=3_32;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.499 3_32 - 415 Methyltransf_26 PF13659.1 117 2.4e-05 19.0 0.0 2 2 0.02 6.6 1.4 0.0 3 21 355 373 353 406 0.72 # 16578 # 17822 # 1 # ID=3_32;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.499 1_25 - 600 AAA_30 PF13604.1 196 7.4e-08 26.8 0.0 1 2 3.2e-07 0.00011 16.4 0.0 4 82 6 92 3 111 0.75 # 19372 # 21171 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.427 1_25 - 600 AAA_30 PF13604.1 196 7.4e-08 26.8 0.0 2 2 0.00012 0.04 8.1 0.0 95 133 191 228 173 282 0.82 # 19372 # 21171 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.427 4_18 - 353 ATPgrasp_Ter PF15632.1 330 4.8e-115 378.3 0.0 1 1 1.6e-117 5.4e-115 378.2 0.0 1 329 4 344 4 345 0.98 # 11569 # 12627 # -1 # ID=4_18;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.499 4_5 - 561 F420_oxidored PF03807.12 96 0.022 9.8 4.3 1 2 0.002 0.66 5.1 1.0 2 34 100 128 99 131 0.88 # 1526 # 3208 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 4_5 - 561 F420_oxidored PF03807.12 96 0.022 9.8 4.3 2 2 0.0041 1.3 4.1 0.0 1 35 271 301 271 339 0.86 # 1526 # 3208 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 2_6 - 598 SMC_N PF02463.14 220 2e-08 28.3 0.0 1 1 1.2e-10 4e-08 27.3 0.0 2 52 3 50 2 82 0.87 # 5766 # 7559 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.378 4_27 - 106 HTH_Tnp_1 PF01527.15 76 1e-17 58.5 1.0 1 1 1.4e-19 1.5e-17 58.0 1.0 1 76 5 81 5 81 0.88 # 19328 # 19645 # -1 # ID=4_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 19_1 - 235 HTH_Tnp_1 PF01527.15 76 0.00082 13.9 0.3 1 1 1.6e-05 0.0018 12.9 0.3 4 51 6 58 4 63 0.79 # 46 # 750 # 1 # ID=19_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 2_10 - 360 HTH_Tnp_1 PF01527.15 76 0.00098 13.7 0.1 1 1 2.1e-05 0.0023 12.5 0.1 26 57 45 77 30 106 0.77 # 11464 # 12543 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.481 2_70 - 190 GerE PF00196.14 58 1.1e-08 28.9 0.0 1 1 7.3e-11 2.4e-08 27.8 0.0 3 55 118 170 116 171 0.95 # 66086 # 66655 # -1 # ID=2_70;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.430 2_26 - 709 TraG-D_C PF12696.2 128 3e-12 41.1 2.3 1 1 1.6e-14 5.4e-12 40.3 1.4 1 100 518 623 518 643 0.81 # 23449 # 25575 # -1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.462 17_1 - 344 DDE_3 PF13358.1 146 2e-24 80.6 0.7 1 1 3.2e-26 5.2e-24 79.2 0.1 2 140 177 314 176 319 0.95 # 105 # 1136 # 1 # ID=17_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.516 19_1 - 235 DDE_3 PF13358.1 146 0.0023 12.3 0.0 1 1 4.2e-05 0.0069 10.7 0.0 32 90 82 141 59 146 0.87 # 46 # 750 # 1 # ID=19_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_60 - 416 MipZ PF09140.6 261 2.3e-12 41.1 2.4 1 2 6e-10 2e-07 24.9 0.2 1 40 115 157 115 189 0.83 # 56848 # 58095 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.385 1_60 - 416 MipZ PF09140.6 261 2.3e-12 41.1 2.4 2 2 7.3e-07 0.00024 14.8 0.0 93 130 253 290 231 301 0.83 # 56848 # 58095 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.385 15_1 - 327 DDE_Tnp_1 PF01609.16 213 1.3e-34 114.2 0.1 1 1 2.3e-36 2.5e-34 113.2 0.1 5 212 138 312 135 313 0.90 # 70 # 1050 # 1 # ID=15_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.547 2_37 - 443 DDE_Tnp_1 PF01609.16 213 1.5e-29 97.7 0.0 1 1 1.8e-31 2e-29 97.3 0.0 4 213 127 352 124 352 0.87 # 39216 # 40544 # -1 # ID=2_37;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.549 6_3 - 246 DDE_Tnp_1 PF01609.16 213 4.8e-24 79.7 0.1 1 1 5.7e-26 6.3e-24 79.3 0.1 6 205 57 224 54 231 0.91 # 3023 # 3760 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.577 2_54 - 407 DDE_Tnp_ISL3 PF01610.12 249 4.7e-55 181.4 0.9 1 1 2e-57 6.7e-55 180.9 0.9 2 247 158 393 157 395 0.95 # 51642 # 52862 # 1 # ID=2_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 6_3 - 246 DDE_Tnp_1_2 PF13586.1 88 0.00016 16.5 0.8 1 1 1.3e-06 0.00043 15.1 0.0 1 32 130 161 130 179 0.89 # 3023 # 3760 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.577 2_39 - 223 AAA_12 PF13087.1 200 5.4e-12 40.1 0.0 1 1 1.4e-13 2.4e-11 38.0 0.0 23 198 24 179 9 181 0.76 # 41208 # 41876 # 1 # ID=2_39;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 1_25 - 600 AAA_12 PF13087.1 200 7.1e-05 16.8 0.1 1 3 0.019 3.1 1.7 0.0 111 152 45 86 4 88 0.83 # 19372 # 21171 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.427 1_25 - 600 AAA_12 PF13087.1 200 7.1e-05 16.8 0.1 2 3 0.037 6.2 0.7 0.0 6 48 241 283 238 339 0.76 # 19372 # 21171 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.427 1_25 - 600 AAA_12 PF13087.1 200 7.1e-05 16.8 0.1 3 3 4.5e-05 0.0074 10.2 0.0 135 196 496 564 375 568 0.78 # 19372 # 21171 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.427 2_6 - 598 AAA_21 PF13304.1 303 5e-20 67.2 7.6 1 1 2.9e-21 9.7e-19 62.9 7.6 2 303 25 397 24 397 0.70 # 5766 # 7559 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.378 1_52 - 282 Sigma70_r4 PF04545.11 50 0.00096 13.1 0.2 1 1 2.5e-05 0.0041 11.1 0.0 18 42 167 191 160 194 0.86 # 49831 # 50676 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.452 1_61 - 337 Sigma70_r4 PF04545.11 50 0.0037 11.2 2.7 1 1 4.6e-05 0.0077 10.2 0.0 21 44 174 197 164 199 0.89 # 58095 # 59105 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.393 11_3 - 265 RRM_6 PF14259.1 70 0.00053 14.6 0.0 1 1 5e-06 0.0016 13.0 0.0 24 64 35 70 7 75 0.75 # 1777 # 2571 # -1 # ID=11_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.498 1_21 - 351 AAA PF00004.24 132 5.5e-06 21.2 0.0 1 1 4.3e-08 1.4e-05 19.9 0.0 1 74 104 183 104 195 0.70 # 15573 # 16625 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.385 1_71 - 90 LexA_DNA_bind PF01726.11 65 0.0028 11.8 0.1 1 1 1.2e-05 0.0041 11.3 0.1 44 62 54 72 42 80 0.88 # 72143 # 72412 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.426 4_12 - 158 Rrf2 PF02082.15 83 0.00056 14.6 0.2 1 2 0.00062 0.068 7.9 0.0 20 52 17 49 1 67 0.85 # 5902 # 6375 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.462 4_12 - 158 Rrf2 PF02082.15 83 0.00056 14.6 0.2 2 2 0.0094 1 4.2 0.1 26 57 118 149 101 151 0.84 # 5902 # 6375 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.462 3_75 - 414 Rrf2 PF02082.15 83 0.00062 14.5 0.1 1 1 2e-05 0.0022 12.7 0.1 16 47 162 192 154 193 0.82 # 44305 # 45546 # 1 # ID=3_75;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.495 1_71 - 90 Rrf2 PF02082.15 83 0.0009 14.0 0.0 1 1 1.3e-05 0.0015 13.3 0.0 31 62 42 73 32 79 0.85 # 72143 # 72412 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.426 4_12 - 158 HTH_27 PF13463.1 68 4e-06 21.7 0.1 1 2 6.8e-06 0.0022 12.9 0.0 7 44 10 48 5 49 0.84 # 5902 # 6375 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.462 4_12 - 158 HTH_27 PF13463.1 68 4e-06 21.7 0.1 2 2 0.00073 0.24 6.4 0.0 21 48 119 147 106 155 0.82 # 5902 # 6375 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.462 1_21 - 351 TIGR00382 TIGR00382 414 0.0011 12.3 0.0 1 1 5.6e-06 0.0019 11.5 0.0 118 195 102 180 88 186 0.71 # 15573 # 16625 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.385 3_32 - 415 N6_N4_Mtase PF01555.13 231 1.1e-27 91.6 0.0 1 1 4.8e-30 1.6e-27 91.1 0.0 1 227 128 388 128 392 0.90 # 16578 # 17822 # 1 # ID=3_32;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.499 4_26 - 205 rve_2 PF13333.1 52 1.1e-05 20.1 0.0 1 1 1.1e-07 1.9e-05 19.3 0.0 1 49 142 195 142 197 0.88 # 18480 # 19094 # -1 # ID=4_26;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.470 2_10 - 360 rve_2 PF13333.1 52 4.2e-05 18.2 0.1 1 1 5.3e-07 8.8e-05 17.2 0.1 16 47 296 331 278 334 0.85 # 11464 # 12543 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.481 4_9 - 152 MerR_1 PF13411.1 69 1.1e-19 64.5 0.0 1 1 1.3e-21 2.1e-19 63.7 0.0 2 67 9 75 8 77 0.96 # 4410 # 4865 # 1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.610 4_4 - 122 MerR_1 PF13411.1 69 1.7e-12 41.6 0.0 1 1 1.5e-14 2.5e-12 41.0 0.0 1 68 4 72 4 73 0.97 # 1143 # 1508 # -1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.675 2_60 - 274 HSF_DNA-bind PF00447.12 104 0.0062 11.3 3.1 1 1 6.2e-05 0.02 9.7 3.1 40 71 82 113 74 188 0.74 # 56657 # 57478 # -1 # ID=2_60;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.395 3_80 - 164 AAA_16 PF13191.1 185 0.00051 14.6 0.2 1 1 3.1e-06 0.001 13.7 0.0 21 43 29 51 19 69 0.82 # 47217 # 47708 # 1 # ID=3_80;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.443 2_26 - 709 AAA_22 PF13401.1 131 2.6e-06 22.2 0.1 1 2 8e-05 0.0066 11.2 0.0 5 57 214 261 213 352 0.79 # 23449 # 25575 # -1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.462 2_26 - 709 AAA_22 PF13401.1 131 2.6e-06 22.2 0.1 2 2 0.00076 0.063 8.0 0.0 48 113 482 540 449 559 0.68 # 23449 # 25575 # -1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.462 3_80 - 164 AAA_22 PF13401.1 131 0.00026 15.8 1.0 1 2 3.4e-05 0.0028 12.4 0.1 7 22 35 50 32 71 0.89 # 47217 # 47708 # 1 # ID=3_80;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.443 3_80 - 164 AAA_22 PF13401.1 131 0.00026 15.8 1.0 2 2 0.045 3.8 2.3 0.1 91 125 79 112 56 118 0.81 # 47217 # 47708 # 1 # ID=3_80;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.443 1_25 - 600 AAA_22 PF13401.1 131 0.00028 15.6 0.4 1 1 9.8e-05 0.0081 10.9 0.0 7 55 19 66 14 127 0.70 # 19372 # 21171 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.427 1_21 - 351 AAA_22 PF13401.1 131 0.00047 14.9 0.2 1 1 8.6e-05 0.0071 11.1 0.2 7 37 104 137 101 194 0.73 # 15573 # 16625 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.385 1_25 - 600 TIGR01074 TIGR01074 668 2e-52 172.6 0.2 1 2 1.8e-34 6.1e-32 104.9 0.1 5 390 7 367 4 378 0.83 # 19372 # 21171 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.427 1_25 - 600 TIGR01074 TIGR01074 668 2e-52 172.6 0.2 2 2 1.9e-22 6.3e-20 65.2 0.0 529 616 485 570 467 595 0.85 # 19372 # 21171 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.427 3_48 - 290 Methyltransf_27 PF13708.1 194 8.7e-58 189.6 0.0 1 1 1.3e-59 2.2e-57 188.3 0.1 2 194 89 285 88 285 0.94 # 30902 # 31771 # 1 # ID=3_48;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 2_59 - 265 Methyltransf_27 PF13708.1 194 1.5e-23 77.9 0.5 1 1 1.2e-25 2e-23 77.5 0.5 5 189 70 255 66 260 0.87 # 55618 # 56412 # -1 # ID=2_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.397 5_2 - 186 NUMOD1 PF07453.8 37 0.0044 11.5 0.0 1 1 2.6e-05 0.0085 10.6 0.0 20 37 165 182 164 182 0.90 # 765 # 1322 # 1 # ID=5_2;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.611 2_27 - 979 TIGR00510 TIGR00510 302 0.003 11.1 0.0 1 1 1.6e-05 0.0051 10.4 0.0 146 203 811 868 794 875 0.87 # 25565 # 28501 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.434 2_6 - 598 AAA_29 PF13555.1 62 2.5e-06 21.6 0.3 1 1 4.5e-08 7.5e-06 20.0 0.0 12 50 11 49 2 54 0.80 # 5766 # 7559 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.378 3_80 - 164 AAA_29 PF13555.1 62 0.0033 11.6 0.0 1 1 3.8e-05 0.0062 10.7 0.0 26 40 35 49 21 65 0.76 # 47217 # 47708 # 1 # ID=3_80;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.443 4_5 - 561 Pyr_redox PF00070.22 80 1.3e-19 65.0 5.9 1 2 2.7e-06 0.00091 14.2 1.6 1 31 99 129 99 131 0.96 # 1526 # 3208 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 4_5 - 561 Pyr_redox PF00070.22 80 1.3e-19 65.0 5.9 2 2 4.7e-18 1.5e-15 52.0 0.1 1 72 271 340 271 350 0.91 # 1526 # 3208 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 2_10 - 360 LZ_Tnp_IS481 PF13011.1 85 0.0074 11.3 3.0 1 1 2.1e-05 0.007 11.3 0.4 24 65 41 82 35 102 0.84 # 11464 # 12543 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.481 2_10 - 360 HTH_Tnp_IS630 PF01710.11 120 0.00091 13.5 0.0 1 1 5.6e-06 0.0018 12.5 0.0 6 40 31 64 26 80 0.86 # 11464 # 12543 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.481 15_1 - 327 DDE_Tnp_1_3 PF13612.1 155 6.5e-10 33.6 0.0 1 1 3.5e-12 1.2e-09 32.7 0.0 5 151 137 292 134 296 0.73 # 70 # 1050 # 1 # ID=15_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.547 4_5 - 561 HI0933_like PF03486.9 409 1.6e-07 24.7 4.6 1 2 1.6e-06 0.00052 13.1 2.7 2 33 99 130 98 138 0.91 # 1526 # 3208 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 4_5 - 561 HI0933_like PF03486.9 409 1.6e-07 24.7 4.6 2 2 6.9e-06 0.0023 11.0 0.0 83 164 285 362 280 382 0.85 # 1526 # 3208 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 17_1 - 344 HTH_32 PF13565.1 77 7.7e-11 37.3 0.3 1 1 9.3e-13 7.7e-11 37.3 0.3 1 77 56 136 56 136 0.89 # 105 # 1136 # 1 # ID=17_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.516 2_10 - 360 HTH_32 PF13565.1 77 2.1e-06 23.1 1.9 1 1 2.6e-08 2.1e-06 23.1 1.9 3 77 60 137 58 137 0.81 # 11464 # 12543 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.481 19_1 - 235 HTH_32 PF13565.1 77 4.3e-06 22.1 0.2 1 1 2.3e-07 1.9e-05 20.0 0.0 26 76 5 50 2 51 0.83 # 46 # 750 # 1 # ID=19_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 9_3 - 491 HTH_32 PF13565.1 77 0.0095 11.4 14.1 1 3 0.0031 0.26 6.8 0.1 34 77 12 52 2 52 0.68 # 469 # 1941 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 9_3 - 491 HTH_32 PF13565.1 77 0.0095 11.4 14.1 2 3 0.00015 0.012 11.0 0.5 21 77 61 136 53 136 0.75 # 469 # 1941 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 9_3 - 491 HTH_32 PF13565.1 77 0.0095 11.4 14.1 3 3 0.011 0.92 5.0 0.2 1 18 131 148 131 159 0.78 # 469 # 1941 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 1_25 - 600 TIGR00609 TIGR00609 1175 5.3e-15 48.8 0.9 1 3 1.5e-05 0.0051 9.1 0.0 9 67 16 71 9 93 0.86 # 19372 # 21171 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.427 1_25 - 600 TIGR00609 TIGR00609 1175 5.3e-15 48.8 0.9 2 3 2.8e-09 9.3e-07 21.5 0.3 376 459 194 277 190 316 0.75 # 19372 # 21171 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.427 1_25 - 600 TIGR00609 TIGR00609 1175 5.3e-15 48.8 0.9 3 3 5.3e-06 0.0017 10.6 0.0 780 812 531 565 317 576 0.86 # 19372 # 21171 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.427 6_2 - 514 A2L_zn_ribbon PF08792.5 33 0.022 8.9 4.7 1 2 0.00018 0.061 7.5 0.6 5 29 76 101 74 102 0.90 # 1146 # 2687 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.554 6_2 - 514 A2L_zn_ribbon PF08792.5 33 0.022 8.9 4.7 2 2 0.0078 2.6 2.3 0.3 20 28 446 454 444 457 0.62 # 1146 # 2687 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.554 3_10 - 472 HTH_3 PF01381.17 55 0.003 12.0 0.0 1 1 2.1e-05 0.007 10.8 0.0 19 49 49 85 35 89 0.81 # 4684 # 6099 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.484 17_1 - 344 HTH_23 PF13384.1 50 9.6e-13 42.0 0.4 1 1 4.6e-13 2.2e-11 37.7 0.1 3 50 26 73 24 73 0.95 # 105 # 1136 # 1 # ID=17_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.516 2_10 - 360 HTH_23 PF13384.1 50 1.7e-08 28.5 0.2 1 1 8.7e-10 4.1e-08 27.3 0.2 5 49 31 74 28 75 0.91 # 11464 # 12543 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.481 19_1 - 235 HTH_23 PF13384.1 50 2e-05 18.8 0.7 1 1 1.3e-05 0.00062 14.0 0.1 28 42 41 55 40 62 0.87 # 46 # 750 # 1 # ID=19_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 9_2 - 109 HTH_23 PF13384.1 50 2.7e-05 18.4 0.1 1 1 1.2e-06 5.8e-05 17.3 0.1 18 43 81 106 73 108 0.84 # 159 # 485 # 1 # ID=9_2;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 4_27 - 106 HTH_23 PF13384.1 50 4.4e-05 17.7 0.4 1 1 3.3e-06 0.00016 15.9 0.0 8 47 17 59 12 62 0.77 # 19328 # 19645 # -1 # ID=4_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 9_3 - 491 HTH_23 PF13384.1 50 0.00073 13.8 10.7 1 2 0.00025 0.012 10.0 0.1 17 39 30 53 13 57 0.79 # 469 # 1941 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 9_3 - 491 HTH_23 PF13384.1 50 0.00073 13.8 10.7 2 2 0.00033 0.016 9.6 0.1 30 42 128 140 126 147 0.85 # 469 # 1941 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 5_2 - 186 HTH_23 PF13384.1 50 0.0013 13.0 1.2 1 1 5e-05 0.0024 12.2 0.0 10 39 154 183 149 184 0.80 # 765 # 1322 # 1 # ID=5_2;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.611 2_15 - 83 zf-DHHC PF01529.15 174 0.0042 11.1 2.4 1 1 1.5e-05 0.005 10.8 2.4 96 149 22 74 13 79 0.84 # 16272 # 16520 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.406 1_60 - 416 Fer4_NifH PF00142.13 273 9.7e-05 16.2 0.0 1 1 6.8e-07 0.00023 15.0 0.0 8 77 123 197 115 206 0.73 # 56848 # 58095 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.385 5_2 - 186 HTH_7 PF02796.10 45 1.4e-13 45.1 0.1 1 1 2.7e-15 3e-13 44.1 0.1 1 44 141 184 141 185 0.98 # 765 # 1322 # 1 # ID=5_2;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.611 9_2 - 109 HTH_7 PF02796.10 45 7.7e-10 33.1 0.0 1 1 1.2e-11 1.4e-09 32.3 0.0 1 42 62 101 62 103 0.92 # 159 # 485 # 1 # ID=9_2;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 9_3 - 491 HTH_7 PF02796.10 45 0.001 13.6 0.2 1 1 4.1e-05 0.0045 11.5 0.2 22 42 32 52 29 54 0.86 # 469 # 1941 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 6_2 - 514 Ribosomal_S27e PF01667.12 55 0.00028 15.0 0.8 1 1 8.6e-07 0.00028 15.0 0.8 5 33 72 100 69 105 0.90 # 1146 # 2687 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.554 1_6 - 106 zinc_ribbon_4 PF13717.1 36 0.00059 14.1 0.6 1 1 1.4e-05 0.0023 12.3 0.4 17 36 57 76 55 76 0.94 # 4548 # 4865 # -1 # ID=1_6;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.387 6_2 - 514 zinc_ribbon_4 PF13717.1 36 0.019 9.3 4.0 1 2 0.00087 0.14 6.5 0.1 1 12 73 84 73 87 0.82 # 1146 # 2687 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.554 6_2 - 514 zinc_ribbon_4 PF13717.1 36 0.019 9.3 4.0 2 2 0.013 2.1 2.8 0.0 5 14 96 105 95 113 0.81 # 1146 # 2687 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.554 3_8 - 91 DUF1870 PF08965.5 118 0.00076 13.7 0.0 1 1 2.8e-06 0.00094 13.5 0.0 23 76 37 89 31 90 0.86 # 3811 # 4083 # 1 # ID=3_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.480 1_21 - 351 Mg_chelatase PF01078.16 207 0.00017 15.4 0.0 1 2 0.0011 0.35 4.6 0.0 25 47 104 126 99 158 0.76 # 15573 # 16625 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.385 1_21 - 351 Mg_chelatase PF01078.16 207 0.00017 15.4 0.0 2 2 7.9e-05 0.026 8.2 0.0 109 164 170 226 165 244 0.83 # 15573 # 16625 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.385 17_1 - 344 HTH_29 PF13551.1 112 1.2e-16 55.5 0.1 1 1 3.3e-18 2.2e-16 54.7 0.1 1 109 30 137 30 140 0.93 # 105 # 1136 # 1 # ID=17_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.516 2_10 - 360 HTH_29 PF13551.1 112 5.7e-07 24.3 1.0 1 1 1.5e-08 9.9e-07 23.5 0.2 10 84 41 115 33 141 0.75 # 11464 # 12543 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.481 9_2 - 109 HTH_29 PF13551.1 112 6.8e-06 20.8 0.6 1 2 0.045 3 2.7 0.1 32 62 42 71 26 78 0.71 # 159 # 485 # 1 # ID=9_2;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 9_2 - 109 HTH_29 PF13551.1 112 6.8e-06 20.8 0.6 2 2 1.6e-06 0.00011 17.0 0.1 9 38 78 106 72 108 0.89 # 159 # 485 # 1 # ID=9_2;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 9_3 - 491 HTH_29 PF13551.1 112 1.4e-05 19.9 1.4 1 2 8e-06 0.00053 14.8 1.4 14 111 33 139 26 140 0.71 # 469 # 1941 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 9_3 - 491 HTH_29 PF13551.1 112 1.4e-05 19.9 1.4 2 2 0.004 0.26 6.1 0.1 24 44 127 147 125 154 0.79 # 469 # 1941 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 4_27 - 106 HTH_29 PF13551.1 112 0.00041 15.1 0.3 1 1 9.2e-06 0.00061 14.6 0.2 12 46 28 60 16 97 0.66 # 19328 # 19645 # -1 # ID=4_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 16_1 - 318 TIGR03413 TIGR03413 248 2.1e-05 18.3 0.0 1 1 1.1e-07 3.5e-05 17.5 0.0 30 164 144 291 122 293 0.66 # 2 # 955 # 1 # ID=16_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.552 4_5 - 561 GIDA PF01134.17 392 2.2e-08 27.9 0.8 1 3 6.5e-11 2.2e-08 27.9 0.8 2 189 100 281 99 297 0.73 # 1526 # 3208 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 4_5 - 561 GIDA PF01134.17 392 2.2e-08 27.9 0.8 2 3 0.074 24 -1.9 0.0 141 173 339 368 313 380 0.66 # 1526 # 3208 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 4_5 - 561 GIDA PF01134.17 392 2.2e-08 27.9 0.8 3 3 0.034 11 -0.8 0.0 350 384 390 424 383 427 0.75 # 1526 # 3208 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 4_5 - 561 NAD_binding_8 PF13450.1 68 0.00025 15.6 1.0 1 2 7.6e-07 0.00025 15.6 1.0 1 35 102 135 102 155 0.90 # 1526 # 3208 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 4_5 - 561 NAD_binding_8 PF13450.1 68 0.00025 15.6 1.0 2 2 0.066 22 -0.2 0.1 1 25 274 298 274 303 0.79 # 1526 # 3208 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 19_1 - 235 DDE_Tnp_IS66 PF03050.9 271 7.7e-12 39.5 0.3 1 1 3e-14 9.9e-12 39.2 0.3 5 132 10 144 6 174 0.87 # 46 # 750 # 1 # ID=19_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 6_3 - 246 DDE_Tnp_1_7 PF13843.1 351 0.00083 13.0 0.0 1 1 3e-06 0.00099 12.8 0.0 148 262 78 186 52 226 0.77 # 3023 # 3760 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.577 3_70 - 211 Spermine_synth PF01564.12 246 4.8e-05 17.0 0.1 1 1 2.1e-07 6.9e-05 16.4 0.1 79 157 83 154 57 160 0.87 # 41442 # 42074 # 1 # ID=3_70;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.458 1_25 - 600 PhoH PF02562.11 205 4.9e-06 20.5 0.5 1 3 0.0018 0.2 5.4 0.0 5 40 4 37 1 77 0.74 # 19372 # 21171 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.427 1_25 - 600 PhoH PF02562.11 205 4.9e-06 20.5 0.5 2 3 0.00021 0.023 8.5 0.0 100 176 172 245 128 260 0.72 # 19372 # 21171 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.427 1_25 - 600 PhoH PF02562.11 205 4.9e-06 20.5 0.5 3 3 0.0093 1 3.1 0.1 61 107 397 443 387 457 0.83 # 19372 # 21171 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.427 3_80 - 164 PhoH PF02562.11 205 0.0015 12.3 0.0 1 1 2.5e-05 0.0027 11.5 0.0 11 37 24 50 14 58 0.80 # 47217 # 47708 # 1 # ID=3_80;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.443 4_17 - 381 PhoH PF02562.11 205 0.0041 10.9 0.0 1 1 5.9e-05 0.0065 10.3 0.0 17 56 154 194 147 206 0.83 # 10415 # 11557 # -1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.566 1_21 - 351 AAA_5 PF07728.9 139 5.6e-33 108.2 0.0 1 1 3.1e-35 1e-32 107.4 0.0 2 139 104 243 103 243 0.94 # 15573 # 16625 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.385 2_26 - 709 TrwB_AAD_bind PF10412.4 386 5.9e-19 62.5 0.0 1 2 1.9e-08 6.2e-06 19.6 0.0 16 130 214 335 201 357 0.75 # 23449 # 25575 # -1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.462 2_26 - 709 TrwB_AAD_bind PF10412.4 386 5.9e-19 62.5 0.0 2 2 8.5e-15 2.8e-12 40.5 0.1 205 371 473 650 464 661 0.76 # 23449 # 25575 # -1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.462 1_60 - 416 TIGR01968 TIGR01968 261 5.5e-07 23.4 1.6 1 2 3.3e-08 1.1e-05 19.2 0.2 2 39 115 155 114 189 0.77 # 56848 # 58095 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.385 1_60 - 416 TIGR01968 TIGR01968 261 5.5e-07 23.4 1.6 2 2 0.0039 1.3 2.5 0.0 104 142 251 289 242 293 0.67 # 56848 # 58095 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.385 15_1 - 327 DDE_Tnp_4 PF13359.1 158 6.7e-07 23.6 0.1 1 1 4.2e-09 1.4e-06 22.6 0.1 6 153 147 306 142 311 0.65 # 70 # 1050 # 1 # ID=15_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.547 1_21 - 351 AAA_18 PF13238.1 129 3.8e-05 18.6 0.5 1 1 6.5e-07 0.00011 17.2 0.0 1 81 104 176 104 206 0.66 # 15573 # 16625 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.385 2_26 - 709 AAA_18 PF13238.1 129 0.0028 12.6 0.0 1 1 3.6e-05 0.006 11.5 0.0 2 38 217 256 217 291 0.79 # 23449 # 25575 # -1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.462 2_6 - 598 TIGR00611 TIGR00611 365 0.00018 15.0 0.0 1 1 8.6e-07 0.00028 14.3 0.0 1 46 1 45 1 54 0.91 # 5766 # 7559 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.378 2_8 - 427 IMS_HHH PF11798.3 32 8.5e-10 32.9 0.3 1 1 1.6e-11 2.6e-09 31.3 0.1 3 32 174 203 172 203 0.92 # 8472 # 9752 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.489 2_9 - 345 IMS_HHH PF11798.3 32 4.2e-08 27.5 0.0 1 1 5.9e-10 9.8e-08 26.4 0.0 3 32 93 122 91 122 0.93 # 9816 # 10850 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.510 15_1 - 327 DDE_Tnp_1_6 PF13751.1 125 2e-08 28.9 0.2 1 1 3.4e-10 5.6e-08 27.4 0.2 63 123 257 314 244 315 0.80 # 70 # 1050 # 1 # ID=15_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.547 2_37 - 443 DDE_Tnp_1_6 PF13751.1 125 0.00032 15.3 0.0 1 1 3.9e-06 0.00065 14.3 0.0 72 124 302 355 275 356 0.83 # 39216 # 40544 # -1 # ID=2_37;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.549 3_80 - 164 DUF258 PF03193.11 161 0.003 11.3 0.0 1 1 1.1e-05 0.0038 11.0 0.0 34 59 30 56 3 85 0.73 # 47217 # 47708 # 1 # ID=3_80;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.443 5_3 - 991 Glycos_transf_1 PF00534.15 172 0.00047 14.2 0.0 1 1 2.8e-06 0.00093 13.2 0.0 31 118 280 373 276 374 0.90 # 1325 # 4297 # 1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.604 1_21 - 351 AAA_3 PF07726.6 131 0.0001 16.5 0.0 1 1 5.4e-07 0.00018 15.7 0.0 3 87 105 192 103 225 0.86 # 15573 # 16625 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.385 2_26 - 709 DUF87 PF01935.12 229 4.3e-07 24.5 0.0 1 1 3.7e-09 1.2e-06 23.1 0.0 10 68 201 257 196 298 0.87 # 23449 # 25575 # -1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.462 2_10 - 360 HTH_28 PF13518.1 52 1.3e-10 35.8 0.1 1 1 9.7e-12 4.6e-10 34.0 0.1 11 51 41 81 32 82 0.89 # 11464 # 12543 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.481 17_1 - 344 HTH_28 PF13518.1 52 3.6e-09 31.1 1.1 1 1 3.5e-10 1.6e-08 29.0 0.1 1 50 29 82 29 84 0.89 # 105 # 1136 # 1 # ID=17_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.516 4_27 - 106 HTH_28 PF13518.1 52 6e-08 27.2 0.1 1 1 2.4e-09 1.1e-07 26.3 0.1 1 39 15 54 15 62 0.91 # 19328 # 19645 # -1 # ID=4_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 9_2 - 109 HTH_28 PF13518.1 52 1.1e-05 19.9 1.7 1 1 2.5e-07 1.2e-05 19.9 0.2 11 38 79 106 71 108 0.88 # 159 # 485 # 1 # ID=9_2;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 9_3 - 491 HTH_28 PF13518.1 52 0.00011 16.7 4.8 1 2 0.00016 0.0074 10.9 0.1 15 35 34 54 32 64 0.91 # 469 # 1941 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 9_3 - 491 HTH_28 PF13518.1 52 0.00011 16.7 4.8 2 2 0.0068 0.32 5.7 0.2 24 37 127 140 125 146 0.88 # 469 # 1941 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 19_1 - 235 HTH_28 PF13518.1 52 0.00019 16.0 1.2 1 1 1.8e-05 0.00084 14.0 1.2 22 36 40 54 13 55 0.76 # 46 # 750 # 1 # ID=19_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 5_2 - 186 HTH_28 PF13518.1 52 0.00071 14.2 0.1 1 1 4.5e-05 0.0021 12.7 0.0 16 34 165 183 150 184 0.81 # 765 # 1322 # 1 # ID=5_2;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.611 2_3 - 578 Shikimate_DH PF01488.15 135 0.0015 13.3 0.0 1 2 3.1e-05 0.01 10.5 0.0 8 56 316 364 311 382 0.77 # 1984 # 3717 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.429 2_3 - 578 Shikimate_DH PF01488.15 135 0.0015 13.3 0.0 2 2 0.068 23 -0.3 0.0 71 93 405 429 393 443 0.75 # 1984 # 3717 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.429 4_9 - 152 MerR-DNA-bind PF09278.6 65 1.1e-20 68.4 1.4 1 1 1.2e-22 2e-20 67.6 1.1 1 65 51 113 51 113 0.95 # 4410 # 4865 # 1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.610 4_4 - 122 MerR-DNA-bind PF09278.6 65 0.00062 14.8 6.6 1 1 6.7e-06 0.0011 14.0 6.6 1 64 47 108 47 109 0.80 # 1143 # 1508 # -1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.675 1_61 - 337 HTH_24 PF13412.1 48 0.0009 13.3 0.1 1 1 1.1e-05 0.0038 11.3 0.0 12 40 167 196 165 198 0.84 # 58095 # 59105 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.393 3_27 - 175 Sigma54_activ_2 PF14532.1 138 0.0026 12.4 0.5 1 1 3.6e-05 0.012 10.3 0.5 63 124 108 173 69 174 0.64 # 14181 # 14705 # 1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.432 5_2 - 186 HTH_10 PF04967.7 53 0.00051 14.2 0.1 1 2 0.061 20 -0.5 0.1 3 30 124 152 123 154 0.66 # 765 # 1322 # 1 # ID=5_2;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.611 5_2 - 186 HTH_10 PF04967.7 53 0.00051 14.2 0.1 2 2 1.1e-05 0.0037 11.5 0.0 29 45 167 183 156 184 0.92 # 765 # 1322 # 1 # ID=5_2;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.611 4_5 - 561 TIGR01292 TIGR01292 300 4.1e-19 62.7 3.6 1 2 1.4e-05 0.0047 10.0 1.1 3 39 100 136 98 142 0.90 # 1526 # 3208 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 4_5 - 561 TIGR01292 TIGR01292 300 4.1e-19 62.7 3.6 2 2 1.3e-18 4.2e-16 52.8 0.1 143 296 271 424 211 426 0.83 # 1526 # 3208 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 17_1 - 344 HTH_33 PF13592.1 60 1.7e-06 22.1 2.3 1 1 1.1e-08 3.5e-06 21.1 0.1 2 52 107 157 106 161 0.95 # 105 # 1136 # 1 # ID=17_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.516 2_6 - 598 MMR_HSR1 PF01926.18 116 0.0028 12.2 0.0 1 1 2.6e-05 0.0087 10.6 0.0 3 20 26 43 24 86 0.76 # 5766 # 7559 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.378 1_25 - 600 UvrD_C_2 PF13538.1 104 2.5e-10 35.0 0.0 1 1 3.8e-12 6.2e-10 33.8 0.0 44 103 494 563 463 564 0.84 # 19372 # 21171 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.427 2_39 - 223 UvrD_C_2 PF13538.1 104 1.7e-06 22.8 0.0 1 1 1.8e-08 2.9e-06 22.0 0.0 60 104 127 177 93 177 0.84 # 41208 # 41876 # 1 # ID=2_39;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 3_70 - 211 TIGR00755 TIGR00755 256 0.00016 15.3 0.2 1 2 0.026 8.6 -0.2 0.0 95 108 59 72 24 86 0.79 # 41442 # 42074 # 1 # ID=3_70;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.458 3_70 - 211 TIGR00755 TIGR00755 256 0.00016 15.3 0.2 2 2 1.6e-06 0.00054 13.6 0.1 36 87 87 140 70 152 0.83 # 41442 # 42074 # 1 # ID=3_70;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.458 1_21 - 351 TIP49 PF06068.8 398 0.00083 12.7 0.0 1 1 5e-06 0.0016 11.7 0.0 41 83 93 134 89 141 0.80 # 15573 # 16625 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.385 4_12 - 158 HTH_36 PF13730.1 55 7.4e-06 20.7 0.3 1 2 1.4e-05 0.0016 13.2 0.0 27 51 24 48 4 49 0.86 # 5902 # 6375 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.462 4_12 - 158 HTH_36 PF13730.1 55 7.4e-06 20.7 0.3 2 2 0.0092 1 4.2 0.1 28 48 120 140 105 143 0.85 # 5902 # 6375 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.462 1_60 - 416 HTH_36 PF13730.1 55 3e-05 18.7 0.0 1 1 9.3e-07 0.0001 17.0 0.0 28 52 52 76 44 79 0.90 # 56848 # 58095 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.385 1_1 - 293 HTH_36 PF13730.1 55 0.0022 12.8 0.0 1 1 6.1e-05 0.0067 11.2 0.0 6 55 216 269 214 269 0.72 # 3 # 881 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.468 3_80 - 164 T2SE PF00437.15 272 0.0035 10.8 0.0 1 1 1.6e-05 0.0053 10.2 0.0 114 149 19 53 3 66 0.82 # 47217 # 47708 # 1 # ID=3_80;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.443 1_21 - 351 NACHT PF05729.7 166 0.0033 11.7 0.1 1 1 2.9e-05 0.0096 10.2 0.0 3 21 104 122 103 128 0.85 # 15573 # 16625 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.385 1_61 - 337 AP_endonuc_2 PF01261.19 213 0.0012 12.8 0.0 1 1 5.7e-06 0.0019 12.1 0.0 13 100 70 169 63 201 0.80 # 58095 # 59105 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_21 - 351 AAA_17 PF13207.1 121 0.00014 17.3 0.0 1 1 1.8e-06 0.0006 15.2 0.0 2 47 104 154 104 213 0.67 # 15573 # 16625 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.385 6_2 - 514 DZR PF12773.2 50 0.02 9.4 4.8 1 2 0.0017 0.55 4.8 3.4 1 20 77 101 64 109 0.61 # 1146 # 2687 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.554 6_2 - 514 DZR PF12773.2 50 0.02 9.4 4.8 2 2 0.0053 1.8 3.1 0.0 13 23 448 458 441 487 0.75 # 1146 # 2687 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.554 4_5 - 561 FAD_binding_2 PF00890.19 417 8.7e-06 19.3 4.9 1 3 2.6e-08 8.7e-06 19.3 4.9 2 32 100 130 99 137 0.91 # 1526 # 3208 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 4_5 - 561 FAD_binding_2 PF00890.19 417 8.7e-06 19.3 4.9 2 3 0.0081 2.7 1.3 0.7 142 209 310 372 298 385 0.74 # 1526 # 3208 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 4_5 - 561 FAD_binding_2 PF00890.19 417 8.7e-06 19.3 4.9 3 3 0.039 13 -1.0 0.0 374 402 374 404 368 417 0.80 # 1526 # 3208 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 1_25 - 600 Viral_helicase1 PF01443.13 234 3.5e-06 21.3 0.0 1 2 0.0015 0.24 5.4 0.0 2 51 20 71 19 87 0.57 # 19372 # 21171 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.427 1_25 - 600 Viral_helicase1 PF01443.13 234 3.5e-06 21.3 0.0 2 2 7.6e-06 0.0013 12.9 0.0 175 232 499 563 490 564 0.87 # 19372 # 21171 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.427 2_39 - 223 Viral_helicase1 PF01443.13 234 3e-05 18.2 0.0 1 1 2.2e-07 3.7e-05 17.9 0.0 183 233 121 177 76 178 0.82 # 41208 # 41876 # 1 # ID=2_39;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.507 2_6 - 598 AAA_15 PF13175.1 415 1.5e-18 61.6 6.4 1 2 4.5e-08 1.5e-05 18.8 4.1 2 57 4 80 3 198 0.58 # 5766 # 7559 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.378 2_6 - 598 AAA_15 PF13175.1 415 1.5e-18 61.6 6.4 2 2 3.4e-15 1.1e-12 42.2 0.0 272 415 224 396 216 396 0.73 # 5766 # 7559 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.378 5_4 - 335 Transposase_20 PF02371.11 87 3.4e-24 79.4 0.2 1 1 2.3e-26 7.7e-24 78.3 0.2 2 78 210 286 209 296 0.94 # 4376 # 5380 # 1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.491 2_54 - 407 HTH_Tnp_ISL3 PF13542.1 52 2.8e-15 49.9 0.0 1 1 4e-17 6.7e-15 48.6 0.0 2 52 92 141 91 141 0.98 # 51642 # 52862 # 1 # ID=2_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 9_3 - 491 HTH_Tnp_ISL3 PF13542.1 52 0.0011 12.8 0.8 1 1 2.4e-05 0.0039 11.0 0.1 30 49 34 53 30 55 0.91 # 469 # 1941 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 4_9 - 152 MerR PF00376.18 38 3.2e-14 46.8 0.1 1 1 4e-16 6.6e-14 45.9 0.1 1 38 9 46 9 46 0.99 # 4410 # 4865 # 1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.610 4_4 - 122 MerR PF00376.18 38 9e-06 19.8 0.0 1 1 8.3e-08 1.4e-05 19.2 0.0 2 38 6 42 5 42 0.89 # 1143 # 1508 # -1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.675 4_12 - 158 HTH_15 PF12324.3 77 0.0008 13.7 0.1 1 1 8.5e-06 0.0028 11.9 0.0 28 59 12 43 2 53 0.79 # 5902 # 6375 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.462 1_21 - 351 RNA_helicase PF00910.17 107 9.5e-05 17.2 0.1 1 1 1.6e-06 0.00052 14.8 0.0 1 64 104 182 104 192 0.81 # 15573 # 16625 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.385 1_21 - 351 AAA_2 PF07724.9 171 2.3e-07 25.5 0.0 1 1 1.8e-09 6e-07 24.1 0.0 6 83 104 182 100 188 0.69 # 15573 # 16625 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.385 1_7 - 353 Peptidase_M41 PF01434.13 213 4e-05 17.7 0.0 1 1 1.9e-07 6.3e-05 17.1 0.0 23 122 163 262 155 312 0.82 # 4901 # 5959 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.435 4_5 - 561 AlaDh_PNT_C PF01262.16 168 0.0046 11.1 5.3 1 2 0.002 0.67 4.1 1.7 21 50 98 127 88 130 0.89 # 1526 # 3208 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 4_5 - 561 AlaDh_PNT_C PF01262.16 168 0.0046 11.1 5.3 2 2 0.00013 0.042 8.0 0.1 19 60 268 309 259 346 0.85 # 1526 # 3208 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 3_10 - 472 DNA_methylase PF00145.12 335 1.3e-79 262.3 0.0 1 1 5.9e-82 2e-79 261.7 0.0 1 332 96 458 96 461 0.88 # 4684 # 6099 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.484 4_5 - 561 3HCDH_N PF02737.13 180 0.017 9.4 7.4 1 2 0.004 1.3 3.2 2.8 1 30 99 128 99 134 0.93 # 1526 # 3208 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 4_5 - 561 3HCDH_N PF02737.13 180 0.017 9.4 7.4 2 2 9.8e-05 0.032 8.4 0.2 2 40 272 310 271 359 0.63 # 1526 # 3208 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 1_6 - 106 zinc_ribbon_5 PF13719.1 37 0.0004 14.6 0.6 1 1 8.6e-06 0.0014 12.8 0.4 17 36 57 76 55 77 0.93 # 4548 # 4865 # -1 # ID=1_6;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.387 6_2 - 514 zinc_ribbon_5 PF13719.1 37 0.015 9.6 3.9 1 2 0.0008 0.13 6.5 0.1 1 12 73 84 73 87 0.82 # 1146 # 2687 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.554 6_2 - 514 zinc_ribbon_5 PF13719.1 37 0.015 9.6 3.9 2 2 0.01 1.7 3.0 0.0 5 14 96 105 95 113 0.81 # 1146 # 2687 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.554 10_2 - 263 Trans_reg_C PF00486.23 77 1.1e-08 29.6 0.0 1 1 6e-11 2e-08 28.7 0.0 10 75 34 97 25 99 0.83 # 575 # 1363 # 1 # ID=10_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.556 4_5 - 561 Glyco_transf_4 PF13439.1 177 6.2e-05 17.4 0.1 1 1 4e-07 0.00013 16.3 0.1 13 39 276 302 273 333 0.83 # 1526 # 3208 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 4_7 - 92 RRM_3 PF08777.6 105 0.0021 12.5 0.0 1 1 8.1e-06 0.0027 12.2 0.0 4 61 26 80 24 88 0.80 # 3682 # 3957 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.605 19_1 - 235 DDE_Tnp_IS240 PF13610.1 140 2.5e-52 171.2 0.0 1 1 3.2e-54 3.5e-52 170.7 0.0 4 139 75 212 73 213 0.99 # 46 # 750 # 1 # ID=19_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 4_26 - 205 DDE_Tnp_IS240 PF13610.1 140 2.4e-11 38.4 0.0 1 1 2.8e-13 3.1e-11 38.0 0.0 2 139 41 182 40 183 0.88 # 18480 # 19094 # -1 # ID=4_26;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.470 2_10 - 360 DDE_Tnp_IS240 PF13610.1 140 8e-05 17.2 0.0 1 1 1.3e-06 0.00014 16.5 0.0 16 140 194 321 183 321 0.84 # 11464 # 12543 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.481 2_6 - 598 TIGR00634 TIGR00634 563 0.00077 12.7 0.0 1 2 1.3e-05 0.0042 10.3 0.0 2 49 3 49 2 64 0.89 # 5766 # 7559 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.378 2_6 - 598 TIGR00634 TIGR00634 563 0.00077 12.7 0.0 2 2 0.036 12 -1.1 0.0 480 539 369 429 357 432 0.77 # 5766 # 7559 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.378 9_3 - 491 HTH_17 PF12728.2 51 0.00059 14.7 0.1 1 2 9.8e-05 0.016 10.1 0.0 7 46 37 80 34 82 0.69 # 469 # 1941 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 9_3 - 491 HTH_17 PF12728.2 51 0.00059 14.7 0.1 2 2 0.055 9.2 1.3 0.0 13 26 127 140 125 146 0.85 # 469 # 1941 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557 2_10 - 360 HTH_17 PF12728.2 51 0.0038 12.1 1.3 1 1 0.00014 0.023 9.6 0.1 7 26 48 70 45 90 0.72 # 11464 # 12543 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.481 6_2 - 514 Zn-ribbon_8 PF09723.5 42 0.00091 13.8 7.4 1 2 0.00023 0.077 7.6 5.0 7 35 76 102 75 106 0.81 # 1146 # 2687 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.554 6_2 - 514 Zn-ribbon_8 PF09723.5 42 0.00091 13.8 7.4 2 2 0.00078 0.26 5.9 0.0 8 24 450 466 437 470 0.75 # 1146 # 2687 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.554 1_55 - 153 Prim_Zn_Ribbon PF08273.7 40 0.0078 10.9 3.6 1 1 3.8e-05 0.012 10.3 3.6 4 39 37 66 34 70 0.75 # 51452 # 51910 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.379 4_12 - 158 HTH_11 PF08279.7 55 4.3e-06 20.9 0.2 1 1 8.5e-08 1.4e-05 19.3 0.0 1 43 6 50 6 64 0.82 # 5902 # 6375 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.462 1_61 - 337 HTH_11 PF08279.7 55 8.3e-05 16.8 0.2 1 1 1.8e-06 0.0003 15.1 0.1 8 38 166 196 162 206 0.85 # 58095 # 59105 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.393 6_3 - 246 DDE_Tnp_1_5 PF13737.1 112 3.2e-25 83.1 0.0 1 2 6.7e-27 2.2e-24 80.4 0.0 43 112 1 70 1 70 0.93 # 3023 # 3760 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.577 6_3 - 246 DDE_Tnp_1_5 PF13737.1 112 3.2e-25 83.1 0.0 2 2 0.066 22 -0.1 0.0 92 109 83 100 74 103 0.76 # 3023 # 3760 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.577 3_4 - 214 MarR_2 PF12802.2 62 0.001 13.3 0.0 1 1 1.1e-05 0.0018 12.5 0.0 21 44 99 122 81 123 0.88 # 1467 # 2108 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.474 4_12 - 158 MarR_2 PF12802.2 62 0.0014 12.9 0.3 1 1 3.6e-05 0.0059 10.9 0.0 9 47 11 48 7 49 0.87 # 5902 # 6375 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.462 9_2 - 109 TrmB PF01978.14 68 9.6e-05 16.7 0.0 1 1 4.2e-07 0.00014 16.2 0.0 19 45 77 103 73 107 0.89 # 159 # 485 # 1 # ID=9_2;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 8_1 - 302 LYTB PF02401.13 281 0.0023 11.5 0.0 1 1 2e-05 0.0066 9.9 0.0 236 272 81 117 70 124 0.91 # 197 # 1102 # 1 # ID=8_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.656 4_5 - 561 Pyr_redox_2 PF07992.9 201 1.4e-40 133.9 0.6 1 1 7.9e-43 2.6e-40 133.0 0.6 2 199 100 406 99 408 0.95 # 1526 # 3208 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 2_6 - 598 DUF2813 PF11398.3 373 2.2e-13 44.5 0.0 1 2 1.1e-10 3.7e-08 27.4 0.0 1 52 1 52 1 125 0.90 # 5766 # 7559 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.378 2_6 - 598 DUF2813 PF11398.3 373 2.2e-13 44.5 0.0 2 2 5.6e-07 0.00019 15.2 0.0 179 345 250 417 230 449 0.70 # 5766 # 7559 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.378 4_18 - 353 ATP-grasp_4 PF13535.1 184 2.2e-22 74.2 0.0 1 1 1.9e-24 6.2e-22 72.8 0.0 2 182 114 293 113 296 0.92 # 11569 # 12627 # -1 # ID=4_18;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.499 4_12 - 158 HTH_Crp_2 PF13545.1 76 2.2e-06 22.0 0.2 1 2 3.4e-05 0.0057 11.1 0.0 29 62 23 56 10 60 0.84 # 5902 # 6375 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.462 4_12 - 158 HTH_Crp_2 PF13545.1 76 2.2e-06 22.0 0.2 2 2 0.00031 0.051 8.0 0.1 31 61 120 150 111 155 0.90 # 5902 # 6375 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.462 1_60 - 416 HTH_Crp_2 PF13545.1 76 2.9e-05 18.4 0.0 1 1 4.9e-07 8.1e-05 17.0 0.0 22 58 43 79 33 91 0.88 # 56848 # 58095 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.385 4_5 - 561 DAO PF01266.19 358 1.7e-11 38.1 9.4 1 3 9.2e-09 3e-06 20.9 0.5 1 38 99 134 99 189 0.87 # 1526 # 3208 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 4_5 - 561 DAO PF01266.19 358 1.7e-11 38.1 9.4 2 3 0.065 21 -1.6 0.0 3 31 273 301 271 305 0.73 # 1526 # 3208 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 4_5 - 561 DAO PF01266.19 358 1.7e-11 38.1 9.4 3 3 4.6e-09 1.5e-06 21.9 0.5 152 201 314 362 305 413 0.87 # 1526 # 3208 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.650 1_43 - 456 Seryl_tRNA_N PF02403.17 108 0.00092 13.8 6.7 1 1 1.1e-05 0.0018 12.9 6.7 17 87 77 149 61 167 0.84 # 42271 # 43638 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.466 9_4 - 363 Seryl_tRNA_N PF02403.17 108 0.0034 12.0 11.6 1 3 0.0041 0.68 4.6 0.1 38 104 63 130 42 134 0.89 # 2089 # 3177 # -1 # ID=9_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.488 9_4 - 363 Seryl_tRNA_N PF02403.17 108 0.0034 12.0 11.6 2 3 0.0014 0.23 6.1 0.1 27 59 161 193 149 215 0.84 # 2089 # 3177 # -1 # ID=9_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.488 9_4 - 363 Seryl_tRNA_N PF02403.17 108 0.0034 12.0 11.6 3 3 0.00079 0.13 6.9 1.6 17 107 233 322 226 323 0.76 # 2089 # 3177 # -1 # ID=9_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.488 1_39 - 906 AAA_10 PF12846.2 304 1.5e-57 189.9 0.0 1 1 4.2e-59 3.5e-57 188.7 0.0 1 296 462 811 462 820 0.91 # 37431 # 40148 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.419 2_26 - 709 AAA_10 PF12846.2 304 2.3e-20 67.8 0.0 1 1 8.3e-22 6.9e-20 66.2 0.0 2 295 214 591 213 597 0.73 # 23449 # 25575 # -1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.462 3_80 - 164 AAA_10 PF12846.2 304 0.00085 13.4 0.0 1 1 1.2e-05 0.001 13.1 0.0 2 22 33 53 32 85 0.86 # 47217 # 47708 # 1 # ID=3_80;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.443 1_25 - 600 AAA_10 PF12846.2 304 0.0017 12.4 0.1 1 1 4.6e-05 0.0038 11.2 0.0 3 28 18 43 16 61 0.85 # 19372 # 21171 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.427 4_12 - 158 HTH_20 PF12840.2 61 2e-05 18.9 2.0 1 3 1.8e-06 0.00061 14.2 0.0 19 50 17 48 12 51 0.92 # 5902 # 6375 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.462 4_12 - 158 HTH_20 PF12840.2 61 2e-05 18.9 2.0 2 3 0.067 22 -0.4 0.0 26 44 67 86 62 94 0.73 # 5902 # 6375 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.462 4_12 - 158 HTH_20 PF12840.2 61 2e-05 18.9 2.0 3 3 0.009 3 2.4 0.2 10 41 111 134 101 152 0.56 # 5902 # 6375 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.462 2_6 - 598 Dynamin_N PF00350.18 168 0.0042 11.5 1.1 1 2 0.00016 0.054 7.9 0.0 3 18 27 42 26 91 0.91 # 5766 # 7559 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.378 2_6 - 598 Dynamin_N PF00350.18 168 0.0042 11.5 1.1 2 2 0.029 9.7 0.6 0.0 26 80 384 436 376 491 0.72 # 5766 # 7559 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.378 3_70 - 211 RrnaAD PF00398.15 262 7.9e-05 16.3 0.0 1 1 3.1e-07 0.0001 16.0 0.0 49 94 100 146 75 176 0.82 # 41442 # 42074 # 1 # ID=3_70;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.458 3_17 - 103 DnaJ_CXXCXGXG PF00684.14 66 4e-06 21.4 0.2 1 2 0.00035 0.038 8.7 0.0 17 27 8 18 3 30 0.69 # 10177 # 10485 # -1 # ID=3_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.476 3_17 - 103 DnaJ_CXXCXGXG PF00684.14 66 4e-06 21.4 0.2 2 2 7e-05 0.0077 10.9 0.0 39 53 47 61 35 67 0.69 # 10177 # 10485 # -1 # ID=3_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.476 1_55 - 153 DnaJ_CXXCXGXG PF00684.14 66 9.6e-05 17.0 7.2 1 1 1.8e-06 0.0002 16.0 7.2 8 59 29 75 25 79 0.73 # 51452 # 51910 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.379 1_50 - 224 DnaJ_CXXCXGXG PF00684.14 66 0.00084 14.0 2.2 1 2 4.8e-05 0.0053 11.4 2.9 33 66 16 44 8 44 0.85 # 48217 # 48888 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.417 1_50 - 224 DnaJ_CXXCXGXG PF00684.14 66 0.00084 14.0 2.2 2 2 0.0018 0.2 6.4 3.3 1 26 27 45 27 52 0.80 # 48217 # 48888 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.417 1_25 - 600 UvrD_C PF13361.1 351 1.7e-40 134.1 0.0 1 1 8e-43 2.6e-40 133.5 0.0 1 349 253 566 253 568 0.87 # 19372 # 21171 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.427 9_4 - 363 AAA_13 PF13166.1 712 0.0024 10.9 17.6 1 2 1.1e-05 0.0038 10.3 3.0 365 468 88 193 38 213 0.53 # 2089 # 3177 # -1 # ID=9_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.488 9_4 - 363 AAA_13 PF13166.1 712 0.0024 10.9 17.6 2 2 0.00033 0.11 5.5 8.5 321 439 228 356 186 362 0.75 # 2089 # 3177 # -1 # ID=9_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.488 1_60 - 416 ArsA_ATPase PF02374.10 305 3.1e-06 21.0 1.1 1 1 2.9e-08 9.6e-06 19.4 0.2 8 136 122 268 115 273 0.63 # 56848 # 58095 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.385 1_60 - 416 AAA_31 PF13614.1 157 1.8e-07 25.8 0.2 1 1 6.9e-09 2.3e-06 22.2 0.1 2 128 116 269 115 293 0.78 # 56848 # 58095 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.385 6_1 - 247 Pterin_bind PF00809.17 210 2.3e-48 158.9 0.0 1 1 2.5e-50 2.7e-48 158.7 0.0 28 210 1 183 1 183 0.98 # 1 # 741 # 1 # ID=6_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.615 21_2 - 75 Pterin_bind PF00809.17 210 4.6e-19 63.2 0.0 1 1 4.5e-21 5e-19 63.1 0.0 1 68 7 74 7 75 0.98 # 454 # 678 # 1 # ID=21_2;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.636 29_1 - 78 Pterin_bind PF00809.17 210 6.8e-10 33.2 0.0 1 1 7.3e-12 8e-10 33.0 0.0 28 75 1 48 1 51 0.91 # 21 # 254 # -1 # ID=29_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.556 2_9 - 345 DNA_pol_lambd_f PF10391.4 52 0.00014 16.0 0.0 1 1 1.1e-06 0.00036 14.7 0.0 6 31 105 131 103 142 0.86 # 9816 # 10850 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.510 4_27 - 106 BrkDBD PF09607.5 58 0.0022 12.2 0.1 1 1 1.3e-05 0.0044 11.2 0.1 3 48 8 50 7 58 0.74 # 19328 # 19645 # -1 # ID=4_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/567a33d9-d779-4118-be63-5af9feb37364 # Target file: checkm_output/bins/pm254/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm254/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/567a33d9-d779-4118-be63-5af9feb37364 checkm_output/bins/pm254/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:01:03 2017 # [ok]