# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_4 - 523 DUF3584 PF12128.3 1201 9.3e-05 9.1 50.2 1 2 6.6e-06 5.3e-05 9.9 37.1 339 533 57 253 44 266 0.83 # 1749 # 3317 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.424 1_4 - 523 DUF3584 PF12128.3 1201 9.3e-05 9.1 50.2 2 2 0.0002 0.0016 5.0 5.2 642 725 296 376 272 450 0.43 # 1749 # 3317 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.424 1_5 - 146 AAA_23 PF13476.1 202 0.00016 11.3 4.5 1 1 2.3e-05 0.00018 11.2 4.5 128 202 45 131 13 135 0.56 # 3577 # 4014 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 1_5 - 146 TIGR02350 TIGR02350 596 0.00012 9.5 1.7 1 1 1.7e-05 0.00014 9.2 1.7 487 571 48 134 29 138 0.80 # 3577 # 4014 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.521 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/d49a4504-d179-438a-9673-212096ff2bb4 # Target file: checkm_output/bins/pm239/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm239/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/d49a4504-d179-438a-9673-212096ff2bb4 checkm_output/bins/pm239/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:00:38 2017 # [ok]