# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_28 - 334 ABC_tran PF00005.22 137 1.8e-07 23.9 0.0 1 1 4.3e-09 3e-07 23.2 0.0 8 51 156 200 152 260 0.86 # 20547 # 21548 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_10 - 203 HTH_35 PF13693.1 78 0.00032 12.9 0.6 1 1 1.3e-05 0.00089 11.5 0.1 4 34 168 198 165 201 0.90 # 8779 # 9387 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 1_28 - 334 Sigma54_activat PF00158.21 168 6.9e-06 18.0 0.0 1 1 1.8e-07 1.2e-05 17.2 0.0 16 67 153 204 140 213 0.80 # 20547 # 21548 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_28 - 334 FtsK_SpoIIIE PF01580.13 205 5.6e-07 21.6 0.0 1 1 3.7e-08 8.7e-07 21.0 0.0 27 65 148 186 120 207 0.71 # 20547 # 21548 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_20 - 858 FtsK_SpoIIIE PF01580.13 205 5.8e-06 18.3 0.0 1 1 6.7e-07 1.6e-05 16.9 0.0 21 64 457 512 441 522 0.80 # 12955 # 15528 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.474 1_34 - 511 FtsK_SpoIIIE PF01580.13 205 0.00081 11.3 0.0 1 1 8.5e-05 0.002 10.0 0.0 29 64 111 152 95 164 0.76 # 27240 # 28772 # -1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.465 1_10 - 203 HTH_38 PF13936.1 44 4.2e-05 15.5 0.1 1 1 6e-07 4.2e-05 15.5 0.1 13 39 172 198 165 201 0.90 # 8779 # 9387 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 1_28 - 334 MobB PF03205.9 140 4e-06 19.0 0.2 1 1 1.7e-07 1.2e-05 17.5 0.0 2 38 161 196 160 208 0.81 # 20547 # 21548 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_3 - 102 HTH_34 PF13601.1 80 3.3e-10 32.4 0.1 1 1 6.6e-12 4.6e-10 31.9 0.1 25 79 39 93 30 94 0.92 # 1806 # 2111 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 1_3 - 102 MarR PF01047.17 59 3.1e-05 16.1 0.0 1 1 6.2e-07 4.3e-05 15.6 0.0 29 58 40 69 13 70 0.92 # 1806 # 2111 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 3_1 - 108 HTH_8 PF02954.14 42 4.4e-10 31.4 0.2 1 1 9e-12 6.3e-10 30.9 0.2 6 41 69 104 65 105 0.92 # 1 # 324 # 1 # ID=3_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.491 1_5 - 195 TetR_N PF00440.18 47 2.3e-08 26.0 0.0 1 1 6.3e-10 4.4e-08 25.1 0.0 2 46 13 57 12 58 0.95 # 3595 # 4179 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.607 1_28 - 334 AAA_19 PF13245.1 76 5.4e-05 15.4 0.1 1 1 1.8e-06 0.00013 14.2 0.1 6 47 155 191 151 221 0.80 # 20547 # 21548 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_37 - 239 CbiA PF01656.18 195 1.2e-07 23.7 0.9 1 1 3.9e-07 2.7e-05 16.0 0.9 3 167 5 144 3 170 0.69 # 30104 # 30820 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.425 1_10 - 203 Sigma70_r4_2 PF08281.7 54 0.00013 13.8 0.0 1 1 8.9e-06 0.00031 12.6 0.0 25 43 178 196 174 198 0.92 # 8779 # 9387 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 2_9 - 113 Sigma70_r4_2 PF08281.7 54 0.00032 12.6 0.0 1 1 1.6e-05 0.00055 11.8 0.0 24 49 37 62 35 63 0.94 # 6458 # 6796 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.499 1_3 - 102 PadR PF03551.9 75 4.1e-23 73.4 0.5 1 1 8e-25 5.6e-23 73.0 0.5 1 74 15 84 15 85 0.97 # 1806 # 2111 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 1_9 - 423 rve PF00665.21 120 7.1e-27 86.3 0.0 1 1 5.8e-28 1.3e-26 85.4 0.0 2 120 173 313 172 313 0.95 # 7192 # 8460 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.650 1_4 - 255 rve PF00665.21 120 7.6e-14 44.3 0.0 1 2 0.061 1.4 1.5 0.0 83 102 30 49 7 51 0.90 # 2338 # 3102 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.610 1_4 - 255 rve PF00665.21 120 7.6e-14 44.3 0.0 2 2 5e-14 1.2e-12 40.5 0.0 8 117 73 179 69 182 0.90 # 2338 # 3102 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.610 1_8 - 235 rve PF00665.21 120 1.2e-13 43.6 0.1 1 2 0.045 1 1.9 0.0 78 102 27 49 6 54 0.84 # 6441 # 7145 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_8 - 235 rve PF00665.21 120 1.2e-13 43.6 0.1 2 2 9.5e-14 2.2e-12 39.6 0.0 9 119 75 182 70 183 0.89 # 6441 # 7145 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 3_5 - 514 zf-ribbon_3 PF13248.1 26 0.04 5.7 9.1 1 2 9.1e-05 0.0064 8.2 0.9 18 24 95 101 93 108 0.74 # 2865 # 4406 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.555 3_5 - 514 zf-ribbon_3 PF13248.1 26 0.04 5.7 9.1 2 2 0.0085 0.6 1.9 0.1 18 23 449 454 446 457 0.83 # 2865 # 4406 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.555 2_7 - 210 AAA_23 PF13476.1 202 0.00051 12.8 0.0 1 1 1.8e-05 0.00062 12.5 0.0 16 47 74 120 50 198 0.66 # 4190 # 4819 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.427 1_34 - 511 AAA_23 PF13476.1 202 0.00075 12.2 1.9 1 1 4.2e-05 0.0015 11.3 1.8 23 43 130 151 126 264 0.88 # 27240 # 28772 # -1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.465 1_28 - 334 Zeta_toxin PF06414.7 201 2e-06 19.4 0.0 1 1 4.7e-08 3.3e-06 18.7 0.0 11 51 154 194 144 206 0.82 # 20547 # 21548 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_33 - 1073 AAA_30 PF13604.1 196 4.4e-50 162.4 4.5 1 1 1.3e-51 4.4e-50 162.4 4.5 1 186 480 657 480 665 0.97 # 24017 # 27235 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 1_28 - 334 AAA_30 PF13604.1 196 4.4e-05 15.5 0.1 1 1 2e-06 7.1e-05 14.8 0.1 13 65 155 206 143 228 0.77 # 20547 # 21548 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_42 - 166 HTH_Tnp_1 PF01527.15 76 6.6e-05 15.3 0.1 1 1 5.8e-06 0.0002 13.7 0.0 22 47 139 164 123 165 0.86 # 32905 # 33402 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_8 - 235 HTH_Tnp_1 PF01527.15 76 0.00018 13.9 0.3 1 1 1.1e-05 0.00038 12.9 0.3 4 51 6 58 4 63 0.79 # 6441 # 7145 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 2_9 - 113 GerE PF00196.14 58 0.0002 13.1 0.0 1 1 4.8e-06 0.00033 12.4 0.0 15 42 36 63 34 65 0.92 # 6458 # 6796 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.499 1_34 - 511 TraG-D_C PF12696.2 128 5.8e-21 67.1 0.0 1 1 1.5e-22 1e-20 66.3 0.0 1 127 352 474 352 475 0.83 # 27240 # 28772 # -1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.465 1_8 - 235 DDE_3 PF13358.1 146 0.0003 13.0 0.0 1 1 1.3e-05 0.00092 11.4 0.0 32 90 82 141 59 146 0.87 # 6441 # 7145 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 5_1 - 290 DDE_Tnp_1 PF01609.16 213 2.7e-33 107.7 0.0 1 1 9.8e-35 3.4e-33 107.3 0.0 10 213 1 231 1 231 0.97 # 209 # 1078 # -1 # ID=5_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.347 7_1 - 83 DDE_Tnp_1 PF01609.16 213 2.1e-05 16.5 0.0 1 1 7e-07 2.4e-05 16.3 0.0 6 44 38 78 33 83 0.90 # 1 # 249 # -1 # ID=7_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.333 1_21 - 234 DivIC PF04977.10 80 0.017 7.1 8.8 1 2 0.00012 0.0087 8.0 0.1 16 39 42 65 29 68 0.74 # 15544 # 16245 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.430 1_21 - 234 DivIC PF04977.10 80 0.017 7.1 8.8 2 2 0.015 1 1.4 3.1 22 50 170 197 141 214 0.69 # 15544 # 16245 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.430 1_3 - 102 Replic_Relax PF13814.1 191 2.4e-05 16.6 0.1 1 1 3.9e-07 2.7e-05 16.5 0.1 16 77 31 90 17 96 0.85 # 1806 # 2111 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 2_8 - 294 RepA_C PF04796.7 161 4.5e-44 142.3 0.0 1 1 8.8e-46 6.2e-44 141.8 0.0 1 160 81 234 81 235 0.94 # 5006 # 5887 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.545 1_33 - 1073 Herpes_Helicase PF02689.9 819 1.6e-05 15.2 0.4 1 3 0.0011 0.078 3.0 0.0 169 209 538 578 490 585 0.85 # 24017 # 27235 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 1_33 - 1073 Herpes_Helicase PF02689.9 819 1.6e-05 15.2 0.4 2 3 0.041 2.8 -2.2 0.0 397 454 639 704 625 709 0.67 # 24017 # 27235 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 1_33 - 1073 Herpes_Helicase PF02689.9 819 1.6e-05 15.2 0.4 3 3 1.5e-05 0.001 9.2 0.0 736 782 851 898 829 917 0.77 # 24017 # 27235 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 1_28 - 334 cobW PF02492.14 178 6.7e-05 14.8 0.0 1 1 1.5e-06 0.00011 14.1 0.0 3 44 162 200 160 225 0.80 # 20547 # 21548 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_28 - 334 AAA_16 PF13191.1 185 3.2e-07 22.9 0.0 1 1 2.9e-08 6.7e-07 21.8 0.0 24 51 159 186 138 211 0.81 # 20547 # 21548 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_20 - 858 AAA_16 PF13191.1 185 9.2e-05 14.9 0.1 1 2 0.00021 0.005 9.2 0.0 25 47 487 506 474 558 0.76 # 12955 # 15528 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.474 1_20 - 858 AAA_16 PF13191.1 185 9.2e-05 14.9 0.1 2 2 0.03 0.71 2.2 0.0 118 170 658 712 621 719 0.77 # 12955 # 15528 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.474 1_34 - 511 AAA_16 PF13191.1 185 0.00056 12.3 0.2 1 1 0.00016 0.0037 9.6 0.2 25 52 127 158 107 378 0.62 # 27240 # 28772 # -1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.465 1_28 - 334 AAA_22 PF13401.1 131 8.8e-07 21.5 0.0 1 1 3.4e-08 2.4e-06 20.1 0.0 3 68 158 217 155 246 0.78 # 20547 # 21548 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_3 - 102 DUF3116 PF11313.3 85 0.00029 12.9 0.1 1 1 5.7e-06 0.0004 12.4 0.1 49 83 50 88 39 90 0.75 # 1806 # 2111 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 1_20 - 858 AAA_29 PF13555.1 62 2.3e-05 16.3 0.0 1 1 1.5e-06 5.3e-05 15.2 0.0 23 41 487 504 475 508 0.86 # 12955 # 15528 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.474 1_28 - 334 AAA_29 PF13555.1 62 6.3e-05 14.9 0.0 1 1 4.8e-06 0.00017 13.6 0.0 22 53 158 189 149 197 0.83 # 20547 # 21548 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_8 - 235 HTH_32 PF13565.1 77 9.2e-07 22.1 0.2 1 1 1.1e-07 3.9e-06 20.0 0.0 26 76 5 50 2 51 0.83 # 6441 # 7145 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_4 - 255 HTH_32 PF13565.1 77 0.00013 15.1 0.2 1 1 1.3e-05 0.00047 13.4 0.2 37 76 15 50 6 51 0.83 # 2338 # 3102 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.610 3_5 - 514 A2L_zn_ribbon PF08792.5 33 0.0046 8.9 4.7 1 2 0.00018 0.013 7.5 0.6 5 29 76 101 74 102 0.90 # 2865 # 4406 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.555 3_5 - 514 A2L_zn_ribbon PF08792.5 33 0.0046 8.9 4.7 2 2 0.0078 0.55 2.3 0.3 20 28 446 454 444 457 0.62 # 2865 # 4406 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.555 5_1 - 290 DDE_Tnp_1_4 PF13701.1 449 7.1e-25 79.4 1.4 1 1 1.4e-26 1e-24 78.9 1.4 152 438 6 287 1 289 0.82 # 209 # 1078 # -1 # ID=5_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.347 1_9 - 423 HTH_23 PF13384.1 50 2.5e-07 22.7 0.9 1 1 5.4e-08 7.5e-07 21.2 0.9 3 45 23 71 21 76 0.87 # 7192 # 8460 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.650 1_10 - 203 HTH_23 PF13384.1 50 3.4e-07 22.3 0.4 1 1 6.8e-08 9.5e-07 20.8 0.1 9 37 170 199 162 202 0.83 # 8779 # 9387 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 1_8 - 235 HTH_23 PF13384.1 50 4.3e-06 18.8 0.7 1 2 0.079 1.1 1.6 0.0 7 27 11 35 7 36 0.69 # 6441 # 7145 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_8 - 235 HTH_23 PF13384.1 50 4.3e-06 18.8 0.7 2 2 9.3e-06 0.00013 14.0 0.1 28 42 41 55 40 62 0.87 # 6441 # 7145 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_42 - 166 HTH_23 PF13384.1 50 0.00018 13.6 0.0 1 1 4.9e-05 0.00068 11.8 0.0 15 38 135 161 124 164 0.82 # 32905 # 33402 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 3_1 - 108 HTH_23 PF13384.1 50 0.00048 12.3 0.0 1 1 5.4e-05 0.00075 11.6 0.0 16 40 79 104 68 106 0.87 # 1 # 324 # 1 # ID=3_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.491 1_10 - 203 HTH_7 PF02796.10 45 8.8e-08 24.4 1.1 1 2 0.0033 0.23 3.8 0.1 2 21 72 91 72 95 0.88 # 8779 # 9387 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 1_10 - 203 HTH_7 PF02796.10 45 8.8e-08 24.4 1.1 2 2 5.9e-08 4.1e-06 19.0 0.1 1 41 161 199 161 202 0.93 # 8779 # 9387 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 3_5 - 514 Ribosomal_S27e PF01667.12 55 6e-05 15.0 0.8 1 1 8.6e-07 6e-05 15.0 0.8 5 33 72 100 69 105 0.90 # 2865 # 4406 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.555 3_5 - 514 zinc_ribbon_4 PF13717.1 36 0.004 9.3 4.0 1 2 0.00044 0.031 6.5 0.1 1 12 73 84 73 87 0.82 # 2865 # 4406 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.555 3_5 - 514 zinc_ribbon_4 PF13717.1 36 0.004 9.3 4.0 2 2 0.0063 0.44 2.8 0.0 5 14 96 105 95 113 0.81 # 2865 # 4406 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.555 1_28 - 334 NB-ARC PF00931.17 287 0.0005 11.3 0.0 1 1 1.6e-05 0.0012 10.1 0.0 12 42 152 182 144 214 0.80 # 20547 # 21548 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_28 - 334 Mg_chelatase PF01078.16 207 0.00037 12.1 0.0 1 1 8.7e-06 0.00061 11.4 0.0 13 57 150 194 139 214 0.73 # 20547 # 21548 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_3 - 102 FeoC PF09012.5 69 0.00065 11.8 0.0 1 1 1.4e-05 0.00098 11.3 0.0 24 48 38 62 30 72 0.81 # 1806 # 2111 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 1_9 - 423 HTH_29 PF13551.1 112 1.2e-06 21.0 2.2 1 1 4.3e-08 1.5e-06 20.8 0.3 13 77 39 109 27 133 0.79 # 7192 # 8460 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.650 1_10 - 203 HTH_29 PF13551.1 112 4.5e-05 16.0 2.4 1 2 0.0073 0.26 3.9 0.1 77 110 25 58 7 60 0.79 # 8779 # 9387 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 1_10 - 203 HTH_29 PF13551.1 112 4.5e-05 16.0 2.4 2 2 4e-05 0.0014 11.2 0.1 7 34 175 201 169 202 0.86 # 8779 # 9387 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 2_12 - 214 TIGR03413 TIGR03413 248 1.3e-06 20.0 0.0 1 1 2.3e-08 1.6e-06 19.7 0.0 41 146 56 173 16 183 0.73 # 8677 # 9318 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.411 1_8 - 235 DDE_Tnp_IS66 PF03050.9 271 7.5e-13 40.6 0.3 1 1 2.7e-14 9.6e-13 40.3 0.3 5 132 10 144 6 174 0.87 # 6441 # 7145 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_4 - 255 DDE_Tnp_IS66 PF03050.9 271 7.9e-10 30.7 0.4 1 1 3.4e-11 1.2e-09 30.2 0.4 11 133 16 144 8 183 0.86 # 2338 # 3102 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.610 1_28 - 334 Arch_ATPase PF01637.13 234 2.4e-05 16.5 0.0 1 1 6.1e-07 4.3e-05 15.7 0.0 16 69 157 207 144 248 0.86 # 20547 # 21548 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_33 - 1073 PhoH PF02562.11 205 7.4e-10 30.7 2.2 1 2 5.7e-07 2e-05 16.3 0.3 5 40 482 518 479 531 0.82 # 24017 # 27235 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 1_33 - 1073 PhoH PF02562.11 205 7.4e-10 30.7 2.2 2 2 3.7e-06 0.00013 13.6 0.1 120 162 565 608 561 642 0.80 # 24017 # 27235 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 1_28 - 334 PhoH PF02562.11 205 1.7e-05 16.5 0.0 1 1 9.2e-07 3.2e-05 15.6 0.0 9 39 149 179 142 210 0.77 # 20547 # 21548 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_28 - 334 AAA_5 PF07728.9 139 2e-05 16.8 0.0 1 1 6.6e-07 4.6e-05 15.6 0.0 2 31 162 192 161 221 0.77 # 20547 # 21548 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 2_11 - 262 SprT-like PF10263.4 157 1.7e-36 117.7 0.0 1 1 4.3e-38 3e-36 116.8 0.0 1 150 12 235 12 242 0.93 # 7484 # 8269 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.532 1_28 - 334 ResIII PF04851.10 184 7.7e-05 15.0 0.0 1 1 2.1e-06 0.00015 14.1 0.0 22 58 141 194 100 214 0.73 # 20547 # 21548 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_34 - 511 TrwB_AAD_bind PF10412.4 386 5.4e-110 359.9 0.0 1 1 2.7e-111 6.3e-110 359.7 0.0 1 385 112 493 112 494 0.95 # 27240 # 28772 # -1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.465 1_20 - 858 TrwB_AAD_bind PF10412.4 386 5.9e-06 17.5 0.1 1 1 1e-06 2.4e-05 15.5 0.0 16 51 487 522 480 531 0.92 # 12955 # 15528 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.474 1_28 - 334 TrwB_AAD_bind PF10412.4 386 1.5e-05 16.1 0.0 1 1 1e-06 2.4e-05 15.4 0.0 13 49 157 192 149 201 0.82 # 20547 # 21548 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_28 - 334 AAA_18 PF13238.1 129 7.1e-05 15.5 0.0 1 1 2.4e-06 0.00017 14.4 0.0 1 28 162 194 162 216 0.76 # 20547 # 21548 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_28 - 334 DUF258 PF03193.11 161 7.9e-05 14.3 0.0 1 1 2.2e-06 0.00015 13.4 0.0 30 97 154 219 135 229 0.74 # 20547 # 21548 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_34 - 511 DUF87 PF01935.12 229 6e-10 31.7 0.0 1 1 2.7e-11 9.4e-10 31.0 0.0 12 78 118 178 110 260 0.78 # 27240 # 28772 # -1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.465 1_28 - 334 DUF87 PF01935.12 229 2.6e-05 16.5 0.0 1 1 1.5e-06 5.4e-05 15.5 0.0 26 61 162 196 156 208 0.84 # 20547 # 21548 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_9 - 423 HTH_28 PF13518.1 52 1.6e-08 26.9 0.1 1 1 9.3e-10 1.6e-08 26.9 0.1 1 46 26 78 26 87 0.76 # 7192 # 8460 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.650 1_10 - 203 HTH_28 PF13518.1 52 3e-05 16.4 1.6 1 1 1.9e-06 3.3e-05 16.3 0.1 8 31 174 198 168 201 0.82 # 8779 # 9387 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 1_8 - 235 HTH_28 PF13518.1 52 4.1e-05 16.0 1.2 1 1 1e-05 0.00018 14.0 1.2 22 36 40 54 13 55 0.76 # 6441 # 7145 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_42 - 166 HTH_28 PF13518.1 52 0.00052 12.5 0.0 1 1 3e-05 0.00052 12.5 0.0 11 33 136 161 125 165 0.80 # 32905 # 33402 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_3 - 102 HTH_12 PF08461.5 66 1.9e-06 20.0 0.7 1 1 4.3e-08 3e-06 19.3 0.7 6 65 15 82 12 83 0.77 # 1806 # 2111 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 2_5 - 111 Cytidylate_kin PF02224.13 158 6.4e-05 14.8 0.1 1 1 1.2e-06 8.5e-05 14.4 0.1 125 157 5 37 2 38 0.90 # 3505 # 3837 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_28 - 334 Sigma54_activ_2 PF14532.1 138 2.6e-07 23.2 0.0 1 1 6.9e-09 4.8e-07 22.3 0.0 14 68 152 206 145 213 0.91 # 20547 # 21548 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_3 - 102 FUR PF01475.14 120 1.4e-05 17.4 0.0 1 1 2.1e-07 1.5e-05 17.4 0.0 29 74 29 77 12 99 0.79 # 1806 # 2111 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 1_28 - 334 MMR_HSR1 PF01926.18 116 0.00057 12.3 0.0 1 1 1.8e-05 0.0013 11.2 0.0 2 24 162 189 161 244 0.73 # 20547 # 21548 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_28 - 334 DEAD PF00270.24 169 1.2e-05 17.2 0.1 1 1 3e-07 2.1e-05 16.5 0.1 11 70 156 212 147 232 0.79 # 20547 # 21548 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_10 - 203 HTH_31 PF13560.1 64 0.002 10.8 4.9 1 1 3.4e-05 0.0024 10.5 2.9 5 34 171 199 142 201 0.86 # 8779 # 9387 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 1_28 - 334 DUF2075 PF09848.4 352 1.9e-05 16.1 0.0 1 1 3.7e-07 2.6e-05 15.7 0.0 1 58 159 213 159 240 0.70 # 20547 # 21548 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_33 - 1073 UvrD_C_2 PF13538.1 104 1.1e-15 50.1 0.6 1 1 6.3e-17 4.4e-15 48.2 0.2 3 102 801 900 799 902 0.78 # 24017 # 27235 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 1_28 - 334 T2SE PF00437.15 272 2.8e-53 172.9 0.1 1 1 9.2e-55 3.2e-53 172.7 0.1 3 270 11 311 9 313 0.92 # 20547 # 21548 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 2_7 - 210 T2SE PF00437.15 272 9.3e-06 17.1 0.0 1 1 3.2e-07 1.1e-05 16.8 0.0 114 222 58 201 16 207 0.76 # 4190 # 4819 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.427 1_9 - 423 HTH_Tnp_Mu_2 PF09039.6 108 5.3e-06 18.6 0.0 1 1 1.8e-07 1.3e-05 17.4 0.0 37 101 100 163 83 166 0.91 # 7192 # 8460 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.650 1_10 - 203 HTH_6 PF01418.12 77 0.00014 14.0 0.3 1 1 6e-06 0.00042 12.5 0.1 35 57 180 202 168 202 0.91 # 8779 # 9387 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 1_28 - 334 NACHT PF05729.7 166 2e-05 16.7 0.0 1 1 1.2e-06 4.3e-05 15.6 0.0 1 24 160 183 160 188 0.90 # 20547 # 21548 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_20 - 858 NACHT PF05729.7 166 0.00063 11.8 0.1 1 2 0.00049 0.017 7.2 0.1 3 19 489 505 488 514 0.86 # 12955 # 15528 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.474 1_20 - 858 NACHT PF05729.7 166 0.00063 11.8 0.1 2 2 0.022 0.77 1.8 0.0 100 161 728 789 692 794 0.78 # 12955 # 15528 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.474 1_28 - 334 UPF0079 PF02367.12 123 8.3e-06 17.9 0.0 1 1 2.3e-07 1.6e-05 17.0 0.0 11 45 155 189 145 193 0.85 # 20547 # 21548 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_20 - 858 AAA_17 PF13207.1 121 0.00066 12.9 0.8 1 2 0.00064 0.045 7.0 0.0 3 19 490 506 489 559 0.82 # 12955 # 15528 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.474 1_20 - 858 AAA_17 PF13207.1 121 0.00066 12.9 0.8 2 2 0.032 2.3 1.5 0.1 50 86 617 649 587 730 0.65 # 12955 # 15528 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.474 3_5 - 514 DZR PF12773.2 50 0.0041 9.4 4.8 1 2 0.0017 0.12 4.8 3.4 1 20 77 101 64 109 0.61 # 2865 # 4406 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.555 3_5 - 514 DZR PF12773.2 50 0.0041 9.4 4.8 2 2 0.0053 0.37 3.1 0.0 13 23 448 458 441 487 0.75 # 2865 # 4406 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.555 1_28 - 334 AAA_25 PF13481.1 194 0.00013 13.8 0.0 1 1 7e-06 0.00049 11.9 0.0 20 58 147 184 129 210 0.78 # 20547 # 21548 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_33 - 1073 Viral_helicase1 PF01443.13 234 2.7e-15 48.9 1.8 1 2 1e-07 7.3e-06 18.0 0.0 3 117 502 619 500 667 0.67 # 24017 # 27235 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 1_33 - 1073 Viral_helicase1 PF01443.13 234 2.7e-15 48.9 1.8 2 2 3.4e-11 2.4e-09 29.4 0.7 165 234 833 903 780 903 0.68 # 24017 # 27235 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 1_28 - 334 Pox_A32 PF04665.7 241 0.00022 13.0 0.0 1 1 5.5e-06 0.00038 12.2 0.0 14 44 160 190 149 211 0.82 # 20547 # 21548 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_34 - 511 AAA_14 PF13173.1 128 0.00035 12.9 0.1 1 2 0.00027 0.019 7.3 0.0 7 28 131 155 127 212 0.85 # 27240 # 28772 # -1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.465 1_34 - 511 AAA_14 PF13173.1 128 0.00035 12.9 0.1 2 2 0.0076 0.53 2.6 0.0 60 77 342 370 302 397 0.60 # 27240 # 28772 # -1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.465 1_3 - 102 Penicillinase_R PF03965.11 115 1.8e-05 17.3 0.0 1 1 2.8e-07 2e-05 17.1 0.0 22 58 28 67 13 99 0.81 # 1806 # 2111 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 1_10 - 203 HTH_Tnp_ISL3 PF13542.1 52 5.2e-05 14.8 0.3 1 1 1.8e-06 0.00013 13.6 0.3 24 47 177 199 172 199 0.84 # 8779 # 9387 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 1_29 - 176 Peptidase_M91 PF14891.1 174 2.1e-05 17.0 0.1 1 1 4.4e-07 3.1e-05 16.5 0.1 15 106 47 149 44 153 0.70 # 21545 # 22072 # 1 # ID=1_29;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.502 1_28 - 334 AAA_33 PF13671.1 143 0.00016 14.0 0.0 1 1 4.1e-06 0.00029 13.2 0.0 2 62 162 236 161 249 0.81 # 20547 # 21548 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_34 - 511 T4SS-DNA_transf PF02534.9 469 3e-16 51.4 0.0 1 2 0.034 2.3 -1.1 0.0 46 86 128 171 95 174 0.73 # 27240 # 28772 # -1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.465 1_34 - 511 T4SS-DNA_transf PF02534.9 469 3e-16 51.4 0.0 2 2 1.6e-17 1.1e-15 49.4 0.0 250 440 300 489 297 503 0.88 # 27240 # 28772 # -1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.465 1_28 - 334 RNA_helicase PF00910.17 107 0.00033 13.3 0.0 1 1 1.4e-05 0.001 11.7 0.0 1 24 162 185 162 215 0.79 # 20547 # 21548 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_28 - 334 AAA_2 PF07724.9 171 6.5e-05 15.3 0.1 1 1 1.7e-06 0.00012 14.4 0.1 2 49 158 203 157 216 0.84 # 20547 # 21548 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_21 - 234 3HCDH_N PF02737.13 180 0.015 7.3 9.4 1 2 0.00053 0.037 6.0 1.4 3 55 12 57 6 74 0.56 # 15544 # 16245 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.430 1_21 - 234 3HCDH_N PF02737.13 180 0.015 7.3 9.4 2 2 0.0013 0.094 4.7 0.7 45 80 142 177 113 210 0.63 # 15544 # 16245 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.430 3_5 - 514 zinc_ribbon_5 PF13719.1 37 0.0031 9.6 3.9 1 2 0.0004 0.028 6.5 0.1 1 12 73 84 73 87 0.82 # 2865 # 4406 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.555 3_5 - 514 zinc_ribbon_5 PF13719.1 37 0.0031 9.6 3.9 2 2 0.0051 0.36 3.0 0.0 5 14 96 105 95 113 0.81 # 2865 # 4406 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.555 1_21 - 234 Med9 PF07544.8 83 0.00021 13.4 3.4 1 2 0.0001 0.007 8.6 0.1 54 79 38 63 36 67 0.84 # 15544 # 16245 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.430 1_21 - 234 Med9 PF07544.8 83 0.00021 13.4 3.4 2 2 0.0015 0.1 4.8 0.5 24 46 168 189 149 215 0.75 # 15544 # 16245 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.430 1_35 - 141 Rossmann-like PF10727.4 127 9.7e-05 14.5 0.0 1 1 2e-06 0.00014 14.0 0.0 78 111 73 106 45 115 0.85 # 28772 # 29194 # -1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_4 - 255 DDE_Tnp_IS240 PF13610.1 140 7.1e-54 174.0 0.0 1 1 2.6e-55 9.2e-54 173.6 0.0 3 139 73 211 71 212 0.98 # 2338 # 3102 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.610 1_8 - 235 DDE_Tnp_IS240 PF13610.1 140 1.2e-52 170.0 0.0 1 1 4.8e-54 1.7e-52 169.5 0.0 4 139 75 212 73 213 0.99 # 6441 # 7145 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_42 - 166 HTH_17 PF12728.2 51 0.0001 14.9 0.1 1 2 0.0084 0.59 2.9 0.0 18 30 64 75 58 86 0.73 # 32905 # 33402 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 1_42 - 166 HTH_17 PF12728.2 51 0.0001 14.9 0.1 2 2 6.6e-05 0.0046 9.7 0.0 3 24 142 163 142 165 0.91 # 32905 # 33402 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.572 3_5 - 514 Zn-ribbon_8 PF09723.5 42 0.00019 13.8 7.4 1 2 0.00023 0.016 7.6 5.0 7 35 76 102 75 106 0.81 # 2865 # 4406 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.555 3_5 - 514 Zn-ribbon_8 PF09723.5 42 0.00019 13.8 7.4 2 2 0.00078 0.055 5.9 0.0 8 24 450 466 437 470 0.75 # 2865 # 4406 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.555 1_33 - 1073 PIF1 PF05970.9 364 1.9e-05 16.1 0.2 1 2 6.8e-06 0.00024 12.5 0.1 5 66 484 541 480 604 0.80 # 24017 # 27235 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 1_33 - 1073 PIF1 PF05970.9 364 1.9e-05 16.1 0.2 2 2 0.019 0.67 1.1 0.0 334 362 798 825 785 827 0.87 # 24017 # 27235 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 1_28 - 334 PIF1 PF05970.9 364 0.00054 11.3 0.0 1 1 2.6e-05 0.00091 10.6 0.0 21 57 158 194 150 208 0.80 # 20547 # 21548 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_3 - 102 TrmB PF01978.14 68 0.00017 13.7 0.1 1 1 7.3e-06 0.00051 12.2 0.1 34 62 40 73 31 78 0.84 # 1806 # 2111 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 1_33 - 1073 Helicase_RecD PF05127.9 177 0.0017 10.4 5.9 1 1 8.8e-06 0.00062 11.8 1.3 5 115 457 589 455 603 0.58 # 24017 # 27235 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 1_7 - 302 LYTB PF02401.13 281 0.00048 11.5 0.0 1 1 2e-05 0.0014 9.9 0.0 236 272 81 117 70 124 0.91 # 5414 # 6319 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.657 1_10 - 203 LacI PF00356.16 46 4.4e-05 15.5 0.7 1 1 1.3e-06 8.9e-05 14.5 0.7 2 19 182 199 181 201 0.92 # 8779 # 9387 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 1_20 - 858 AAA_10 PF12846.2 304 1.4e-31 102.4 0.0 1 1 2e-32 4.6e-31 100.7 0.0 2 293 487 763 486 770 0.88 # 12955 # 15528 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.474 1_34 - 511 AAA_10 PF12846.2 304 8.6e-12 37.4 0.0 1 2 2.3e-08 5.4e-07 21.6 0.0 3 47 128 173 126 216 0.86 # 27240 # 28772 # -1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.465 1_34 - 511 AAA_10 PF12846.2 304 8.6e-12 37.4 0.0 2 2 6.2e-06 0.00014 13.7 0.0 214 286 329 416 308 433 0.67 # 27240 # 28772 # -1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.465 1_28 - 334 AAA_10 PF12846.2 304 0.00013 13.8 0.0 1 1 1.2e-05 0.00028 12.8 0.0 3 28 161 186 159 218 0.74 # 20547 # 21548 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 6_1 - 280 Pterin_bind PF00809.17 210 1.8e-58 189.7 0.0 1 1 3e-60 2.1e-58 189.5 0.0 1 210 7 216 7 216 0.98 # 25 # 864 # -1 # ID=6_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.617 1_28 - 334 IstB_IS21 PF01695.12 178 3.3e-05 15.8 0.0 1 1 9.4e-07 6.6e-05 14.8 0.0 43 79 155 190 128 206 0.82 # 20547 # 21548 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 2_10 - 169 SSB PF00436.20 104 1.3e-43 139.6 0.3 1 1 2.2e-45 1.5e-43 139.4 0.3 1 99 6 105 6 113 0.96 # 6904 # 7410 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.564 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/5e99d1be-fb63-4636-8f2b-109047ca4d94 # Target file: checkm_output/bins/pm215/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm215/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/5e99d1be-fb63-4636-8f2b-109047ca4d94 checkm_output/bins/pm215/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:00:07 2017 # [ok]