# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 2_16 - 584 KaiC PF06745.8 227 0.00034 12.8 0.3 1 2 0.0013 0.068 5.2 0.0 24 60 13 48 8 114 0.77 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 KaiC PF06745.8 227 0.00034 12.8 0.3 2 2 0.0016 0.088 4.9 0.2 21 57 329 364 322 494 0.70 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 1_49 - 388 KaiC PF06745.8 227 0.00091 11.4 0.0 1 1 2.9e-05 0.0016 10.6 0.0 14 59 147 191 137 201 0.76 # 28191 # 29354 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 3_5 - 565 K_oxygenase PF13434.1 341 6.1e-06 18.3 0.0 1 3 0.0039 0.43 2.4 0.0 187 220 94 125 59 130 0.79 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 K_oxygenase PF13434.1 341 6.1e-06 18.3 0.0 2 3 3.3e-06 0.00036 12.5 0.0 132 231 218 308 202 332 0.82 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 K_oxygenase PF13434.1 341 6.1e-06 18.3 0.0 3 3 0.057 6.2 -1.4 0.0 132 160 346 369 314 377 0.67 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_12 - 191 HTH_IclR PF09339.5 52 1.2e-06 21.1 0.2 1 1 4.2e-08 4.5e-06 19.3 0.1 12 40 152 180 150 181 0.92 # 10026 # 10598 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.522 2_16 - 584 ABC_tran PF00005.22 137 1.5e-05 18.3 0.0 1 2 0.0089 0.48 3.7 0.0 14 111 11 111 8 119 0.77 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 ABC_tran PF00005.22 137 1.5e-05 18.3 0.0 2 2 5.3e-05 0.0029 10.9 0.0 13 49 329 365 322 459 0.77 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 1_49 - 388 ABC_tran PF00005.22 137 0.00015 15.1 0.0 1 1 5.3e-06 0.00029 14.2 0.0 16 33 157 174 149 217 0.83 # 28191 # 29354 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 3_19 - 186 HTH_22 PF13309.1 64 1.3e-05 18.0 0.0 1 1 1.5e-06 8.1e-05 15.4 0.0 47 64 166 183 163 183 0.94 # 13319 # 13876 # 1 # ID=3_19;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.611 2_12 - 191 HTH_22 PF13309.1 64 0.00034 13.4 0.1 1 1 4.2e-05 0.0023 10.8 0.0 45 63 161 179 148 180 0.85 # 10026 # 10598 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.522 1_49 - 388 FtsK_SpoIIIE PF01580.13 205 0.00011 14.7 0.0 1 1 1.9e-06 0.00021 13.8 0.0 41 59 155 173 129 184 0.85 # 28191 # 29354 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 2_12 - 191 HTH_38 PF13936.1 44 1e-06 21.2 0.2 1 1 9.7e-09 1e-06 21.2 0.2 9 41 147 179 145 182 0.92 # 10026 # 10598 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.522 3_5 - 565 FAD_oxidored PF12831.2 428 3.2e-06 19.4 3.6 1 1 2.9e-08 3.2e-06 19.4 3.6 2 41 100 138 99 167 0.83 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_16 - 584 MobB PF03205.9 140 7.7e-06 18.7 0.1 1 2 0.00038 0.021 7.6 0.0 4 38 12 45 9 88 0.79 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 MobB PF03205.9 140 7.7e-06 18.7 0.1 2 2 0.00018 0.0095 8.7 0.0 4 49 331 376 329 413 0.82 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 1_49 - 388 MobB PF03205.9 140 0.00055 12.7 0.0 1 1 2.1e-05 0.0011 11.7 0.0 4 25 156 177 154 190 0.85 # 28191 # 29354 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 2_18 - 118 MarR PF01047.17 59 0.00062 12.5 0.2 1 1 1.1e-05 0.0012 11.6 0.1 4 47 17 60 15 65 0.92 # 14997 # 15350 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.537 3_5 - 565 Pyr_redox_3 PF13738.1 203 1.4e-17 57.4 0.1 1 2 4.4e-14 4.8e-12 39.3 0.1 1 201 101 303 101 305 0.75 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 Pyr_redox_3 PF13738.1 203 1.4e-17 57.4 0.1 2 2 9e-07 9.7e-05 15.5 0.0 93 147 320 375 309 430 0.76 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 NAD_binding_7 PF13241.1 103 3.7e-07 23.4 1.2 1 2 5.4e-05 0.0058 9.9 0.2 9 38 99 128 96 184 0.89 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 NAD_binding_7 PF13241.1 103 3.7e-07 23.4 1.2 2 2 1.4e-05 0.0015 11.8 0.1 8 41 270 306 264 380 0.74 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_13 - 83 HTH_8 PF02954.14 42 1e-05 18.0 0.1 1 1 1.8e-07 1.9e-05 17.2 0.1 18 36 14 32 13 33 0.92 # 7541 # 7789 # 1 # ID=1_13;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.566 2_16 - 584 AAA_19 PF13245.1 76 2.4e-09 29.9 1.9 1 2 7.2e-06 0.00039 13.2 0.0 12 50 11 44 4 50 0.87 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 AAA_19 PF13245.1 76 2.4e-09 29.9 1.9 2 2 4.8e-06 0.00026 13.8 0.2 4 45 320 358 318 378 0.80 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 1_62 - 1017 AAA_19 PF13245.1 76 0.00056 12.7 0.0 1 1 3.2e-05 0.0017 11.1 0.0 14 31 492 508 481 518 0.90 # 39567 # 42617 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.470 2_16 - 584 CbiA PF01656.18 195 2.6e-29 95.0 0.0 1 2 2.3e-16 2.5e-14 46.1 0.0 4 161 13 240 10 264 0.70 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 CbiA PF01656.18 195 2.6e-29 95.0 0.0 2 2 1.4e-16 1.6e-14 46.8 0.0 4 157 332 528 329 557 0.76 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 3_9 - 560 rve PF00665.21 120 1.9e-26 85.6 0.0 1 1 3.3e-28 3.6e-26 84.7 0.0 2 120 173 313 172 313 0.95 # 4737 # 6416 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.647 2_16 - 584 YhjQ PF06564.7 244 2.9e-09 29.6 0.1 1 3 2e-07 2.2e-05 16.9 0.0 10 52 16 58 11 154 0.64 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 YhjQ PF06564.7 244 2.9e-09 29.6 0.1 2 3 5.5e-05 0.0059 8.9 0.0 10 48 335 373 328 400 0.84 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 YhjQ PF06564.7 244 2.9e-09 29.6 0.1 3 3 0.069 7.5 -1.2 0.0 98 128 471 501 426 562 0.71 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 1_49 - 388 AAA_23 PF13476.1 202 2.1e-06 21.2 0.0 1 1 8.3e-08 4.5e-06 20.1 0.0 19 44 152 177 140 225 0.86 # 28191 # 29354 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 2_16 - 584 AAA_23 PF13476.1 202 5.7e-05 16.5 0.0 1 2 0.06 3.3 1.0 0.1 24 37 13 26 11 43 0.81 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 AAA_23 PF13476.1 202 5.7e-05 16.5 0.0 2 2 1.3e-05 0.00071 12.9 0.0 18 47 326 355 312 493 0.78 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 1_1 - 211 TIGR00573 TIGR00573 217 2.1e-07 23.3 0.0 1 1 2.7e-09 2.9e-07 22.9 0.0 12 91 107 182 103 187 0.88 # 70 # 702 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.613 2_16 - 584 AAA_24 PF13479.1 213 0.0064 9.1 4.4 1 2 0.0031 0.33 3.5 0.2 10 50 15 65 10 146 0.62 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 AAA_24 PF13479.1 213 0.0064 9.1 4.4 2 2 0.00059 0.063 5.8 0.7 7 22 331 346 328 352 0.87 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 TIGR00416 TIGR00416 454 0.00062 11.2 0.1 1 2 6.7e-05 0.0072 7.7 0.0 98 188 12 102 8 120 0.89 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 TIGR00416 TIGR00416 454 0.00062 11.2 0.1 2 2 0.0076 0.83 0.9 0.0 95 123 328 356 316 368 0.83 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 AAA_30 PF13604.1 196 2.6e-06 20.2 0.9 1 2 0.0054 0.58 2.7 0.0 22 54 12 44 3 83 0.86 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 AAA_30 PF13604.1 196 2.6e-06 20.2 0.9 2 2 9.1e-07 9.8e-05 15.0 0.2 10 54 319 363 316 381 0.89 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 3_5 - 565 F420_oxidored PF03807.12 96 0.0076 9.7 4.1 1 2 0.0023 0.25 4.9 1.2 2 31 100 126 99 131 0.87 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 F420_oxidored PF03807.12 96 0.0076 9.7 4.1 2 2 0.0075 0.81 3.3 0.1 1 34 271 300 271 323 0.87 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_44 - 122 CPSase_L_D3 PF02787.14 123 0.00085 12.1 0.2 1 1 1.1e-05 0.0012 11.6 0.2 50 96 45 91 21 102 0.78 # 23967 # 24332 # -1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.418 1_49 - 388 SMC_N PF02463.14 220 0.0012 11.0 0.0 1 1 2.1e-05 0.0023 10.2 0.0 26 50 154 178 147 195 0.81 # 28191 # 29354 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 2_19 - 696 TraG-D_C PF12696.2 128 0.00015 14.7 0.1 1 1 2.4e-06 0.00026 13.9 0.1 3 94 437 524 435 556 0.78 # 15653 # 17740 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.539 2_16 - 584 MipZ PF09140.6 261 7.5e-08 24.7 2.8 1 2 5.9e-05 0.0063 8.6 0.0 8 39 15 46 10 63 0.89 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 MipZ PF09140.6 261 7.5e-08 24.7 2.8 2 2 3e-06 0.00033 12.8 0.6 9 39 335 365 329 464 0.63 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 1_7 - 444 ACT PF01842.20 66 8e-05 15.1 0.7 1 3 0.041 4.5 -0.0 0.0 13 27 251 265 250 265 0.91 # 3069 # 4400 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.602 1_7 - 444 ACT PF01842.20 66 8e-05 15.1 0.7 2 3 2e-05 0.0021 10.6 0.1 7 27 338 358 335 358 0.93 # 3069 # 4400 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.602 1_7 - 444 ACT PF01842.20 66 8e-05 15.1 0.7 3 3 0.059 6.4 -0.5 0.0 30 59 384 411 382 413 0.74 # 3069 # 4400 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.602 2_16 - 584 AAA PF00004.24 132 1.1e-05 18.7 1.1 1 2 0.003 0.33 4.2 0.0 2 22 12 32 11 88 0.76 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 AAA PF00004.24 132 1.1e-05 18.7 1.1 2 2 7.4e-06 0.0008 12.7 0.4 2 23 331 352 330 517 0.84 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 1_13 - 83 HTH_37 PF13744.1 80 3.2e-05 16.7 0.0 1 1 9.1e-07 9.8e-05 15.2 0.0 24 54 7 37 4 45 0.89 # 7541 # 7789 # 1 # ID=1_13;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.566 2_16 - 584 TIGR00064 TIGR00064 279 6.1e-07 21.6 0.1 1 2 0.00038 0.041 5.8 0.0 78 116 7 45 2 56 0.88 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 TIGR00064 TIGR00064 279 6.1e-07 21.6 0.1 2 2 1.9e-06 0.0002 13.3 0.0 74 116 322 364 289 389 0.81 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 1_18 - 325 Hydantoinase_A PF01968.13 290 1.2e-07 24.1 3.6 1 2 5.2e-07 5.6e-05 15.3 0.1 67 96 158 186 140 193 0.83 # 10096 # 11070 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.556 1_18 - 325 Hydantoinase_A PF01968.13 290 1.2e-07 24.1 3.6 2 2 3.1e-05 0.0034 9.5 0.1 212 265 248 301 191 322 0.76 # 10096 # 11070 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.556 3_1 - 143 MerR_1 PF13411.1 69 9.3e-20 63.3 0.0 1 1 2.9e-21 1.6e-19 62.6 0.0 2 67 9 75 8 77 0.96 # 2 # 430 # -1 # ID=3_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.594 3_6 - 121 MerR_1 PF13411.1 69 5.9e-14 44.7 0.0 1 1 1.8e-15 9.5e-14 44.0 0.0 1 68 4 72 4 73 0.97 # 3363 # 3725 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.697 2_16 - 584 AAA_16 PF13191.1 185 1.6e-08 27.8 1.3 1 2 4.1e-05 0.0015 11.5 0.3 23 130 7 101 3 261 0.79 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 AAA_16 PF13191.1 185 1.6e-08 27.8 1.3 2 2 9.5e-06 0.00034 13.6 0.0 17 83 320 385 312 461 0.61 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 3_10 - 331 AAA_16 PF13191.1 185 2.2e-05 17.5 0.0 1 1 8.8e-06 0.00032 13.7 0.0 8 103 45 145 43 186 0.62 # 6419 # 7411 # 1 # ID=3_10;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.649 1_49 - 388 AAA_16 PF13191.1 185 0.00097 12.1 0.0 1 1 5.3e-05 0.0019 11.2 0.0 26 50 154 178 140 211 0.85 # 28191 # 29354 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 3_10 - 331 AAA_22 PF13401.1 131 5.5e-17 55.2 0.0 1 1 3.7e-18 1e-16 54.3 0.0 7 126 64 190 59 194 0.94 # 6419 # 7411 # 1 # ID=3_10;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.649 1_49 - 388 AAA_22 PF13401.1 131 3.2e-06 20.3 0.0 1 1 2.9e-07 7.7e-06 19.1 0.0 4 30 152 178 149 243 0.84 # 28191 # 29354 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 2_16 - 584 AAA_22 PF13401.1 131 4e-05 16.8 0.3 1 2 0.034 0.9 2.7 0.0 7 68 11 67 8 127 0.72 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 AAA_22 PF13401.1 131 4e-05 16.8 0.3 2 2 0.00014 0.0039 10.4 0.1 3 64 326 379 323 451 0.60 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 1_62 - 1017 AAA_22 PF13401.1 131 0.00017 14.7 0.0 1 1 3.4e-05 0.00091 12.4 0.0 8 70 492 558 486 594 0.69 # 39567 # 42617 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.470 2_16 - 584 Thymidylate_kin PF02223.12 186 5.7e-06 18.8 0.1 1 2 0.00041 0.045 6.1 0.0 3 47 15 59 13 73 0.86 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 Thymidylate_kin PF02223.12 186 5.7e-06 18.8 0.1 2 2 3.3e-05 0.0036 9.7 0.0 5 54 336 384 333 409 0.84 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 3_6 - 121 DUF977 PF06163.6 127 0.00032 13.5 0.1 1 1 5.9e-06 0.00064 12.5 0.0 27 70 4 47 2 65 0.90 # 3363 # 3725 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.697 1_30 - 287 Methyltransf_27 PF13708.1 194 2.1e-69 225.9 0.0 1 1 3.3e-71 3.5e-69 225.2 0.0 2 194 89 282 88 282 0.98 # 17465 # 18325 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.524 3_19 - 186 NUMOD1 PF07453.8 37 0.0014 11.5 0.0 1 1 2.6e-05 0.0028 10.6 0.0 20 37 165 182 164 182 0.90 # 13319 # 13876 # 1 # ID=3_19;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.611 1_49 - 388 AAA_29 PF13555.1 62 9.6e-06 18.1 0.1 1 1 4.4e-07 2.4e-05 16.9 0.1 26 43 155 172 147 175 0.84 # 28191 # 29354 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 2_16 - 584 AAA_29 PF13555.1 62 1e-05 18.0 1.0 1 2 0.006 0.32 3.6 0.0 26 40 11 25 5 33 0.83 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 AAA_29 PF13555.1 62 1e-05 18.0 1.0 2 2 1.2e-05 0.00064 12.3 0.2 22 45 327 349 319 359 0.82 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 3_5 - 565 Pyr_redox PF00070.22 80 3.9e-20 65.1 6.0 1 2 1.4e-06 0.00015 15.2 1.5 1 31 99 129 99 131 0.96 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 Pyr_redox PF00070.22 80 3.9e-20 65.1 6.0 2 2 6.2e-18 6.7e-16 51.6 0.2 1 74 271 345 271 354 0.90 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_16 - 584 adh_short_C2 PF13561.1 241 0.0003 13.6 0.0 1 2 0.00089 0.096 5.4 0.0 1 32 18 61 17 131 0.64 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 adh_short_C2 PF13561.1 241 0.0003 13.6 0.0 2 2 0.00055 0.059 6.1 0.0 5 45 340 381 336 463 0.73 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_12 - 191 HTH_Tnp_IS630 PF01710.11 120 0.00012 14.7 0.0 1 1 2.5e-06 0.00027 13.6 0.0 8 44 148 184 145 189 0.90 # 10026 # 10598 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.522 2_16 - 584 SRP54 PF00448.17 196 9e-09 28.0 3.1 1 2 2.2e-05 0.0024 10.3 0.0 2 38 9 45 8 68 0.93 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 SRP54 PF00448.17 196 9e-09 28.0 3.1 2 2 2.1e-07 2.3e-05 16.9 0.1 4 38 330 364 327 401 0.92 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 3_5 - 565 HI0933_like PF03486.9 409 2.4e-08 25.8 3.7 1 2 1.2e-06 0.00013 13.5 2.5 2 33 99 130 98 138 0.91 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 HI0933_like PF03486.9 409 2.4e-08 25.8 3.7 2 2 7.2e-06 0.00078 10.9 0.0 82 164 284 366 276 385 0.83 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_13 - 83 HTH_3 PF01381.17 55 2.3e-09 30.1 0.1 1 1 9.3e-11 3.4e-09 29.5 0.1 4 45 9 50 6 56 0.86 # 7541 # 7789 # 1 # ID=1_13;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.566 1_27 - 89 HTH_3 PF01381.17 55 1.2e-06 21.4 0.0 1 1 4.2e-08 1.5e-06 21.0 0.0 8 36 41 69 33 78 0.88 # 14993 # 15259 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.573 1_22 - 160 HTH_3 PF01381.17 55 0.00015 14.6 0.1 1 2 0.0022 0.078 5.9 0.0 2 20 15 33 14 37 0.91 # 12694 # 13173 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 1_22 - 160 HTH_3 PF01381.17 55 0.00015 14.6 0.1 2 2 0.0016 0.059 6.3 0.0 1 23 96 118 96 120 0.89 # 12694 # 13173 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 3_9 - 560 HTH_23 PF13384.1 50 4.4e-07 22.5 0.9 1 1 7.9e-08 1.7e-06 20.6 0.9 3 45 23 71 21 76 0.87 # 4737 # 6416 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.647 2_12 - 191 HTH_23 PF13384.1 50 1.3e-06 21.0 0.6 1 1 6.2e-08 1.3e-06 21.0 0.6 2 39 143 180 142 185 0.91 # 10026 # 10598 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.522 1_27 - 89 HTH_23 PF13384.1 50 7.6e-06 18.6 0.0 1 1 5.3e-07 1.1e-05 18.0 0.0 16 39 38 64 33 68 0.83 # 14993 # 15259 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.573 1_13 - 83 HTH_23 PF13384.1 50 5e-05 16.0 0.0 1 1 4.4e-06 9.4e-05 15.1 0.0 15 34 10 31 6 40 0.81 # 7541 # 7789 # 1 # ID=1_13;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.566 3_19 - 186 HTH_23 PF13384.1 50 0.00043 13.0 1.2 1 1 3.6e-05 0.00077 12.2 0.0 10 39 154 183 149 184 0.80 # 13319 # 13876 # 1 # ID=3_19;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.611 2_16 - 584 Fer4_NifH PF00142.13 273 6e-13 41.5 0.1 1 2 1.5e-09 1.6e-07 23.7 0.0 5 58 13 65 10 89 0.81 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 Fer4_NifH PF00142.13 273 6e-13 41.5 0.1 2 2 8.3e-07 8.9e-05 14.7 0.0 5 62 332 388 329 406 0.77 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_12 - 191 HTH_7 PF02796.10 45 2.2e-15 49.4 0.7 1 1 8.7e-17 4.7e-15 48.3 0.2 1 44 141 181 141 182 0.98 # 10026 # 10598 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.522 3_19 - 186 HTH_7 PF02796.10 45 4.7e-14 45.1 0.1 1 1 1.8e-15 9.7e-14 44.1 0.1 1 44 141 184 141 185 0.98 # 13319 # 13876 # 1 # ID=3_19;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.611 1_13 - 83 HTH_19 PF12844.2 64 4.1e-08 26.3 0.0 1 1 1.2e-09 6.2e-08 25.7 0.0 8 45 10 47 8 56 0.86 # 7541 # 7789 # 1 # ID=1_13;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.566 1_27 - 89 HTH_19 PF12844.2 64 9.1e-05 15.5 0.0 1 1 2.3e-06 0.00012 15.1 0.0 4 39 33 69 30 73 0.85 # 14993 # 15259 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.573 2_16 - 584 NB-ARC PF00931.17 287 1.1e-06 20.7 0.1 1 2 0.0013 0.14 3.9 0.0 21 36 10 25 3 36 0.86 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 NB-ARC PF00931.17 287 1.1e-06 20.7 0.1 2 2 8.4e-07 9.1e-05 14.4 0.0 17 53 325 360 314 403 0.77 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 3_9 - 560 HTH_29 PF13551.1 112 3.7e-06 20.1 0.3 1 1 6.9e-08 3.7e-06 20.1 0.3 13 77 39 109 27 132 0.79 # 4737 # 6416 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.647 2_12 - 191 HTH_29 PF13551.1 112 2.9e-05 17.3 0.6 1 2 0.087 4.7 0.5 0.1 25 50 115 139 97 147 0.64 # 10026 # 10598 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.522 2_12 - 191 HTH_29 PF13551.1 112 2.9e-05 17.3 0.6 2 2 4.1e-06 0.00022 14.4 0.1 3 35 150 181 148 188 0.91 # 10026 # 10598 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.522 3_5 - 565 Glyco_trans_4_4 PF13579.1 160 0.00021 14.5 1.7 1 1 4.2e-06 0.00046 13.4 0.1 2 26 276 306 276 340 0.70 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 NAD_binding_9 PF13454.1 156 3.1e-05 16.8 2.8 1 3 0.0081 0.88 2.3 0.1 1 41 101 135 101 162 0.81 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 NAD_binding_9 PF13454.1 156 3.1e-05 16.8 2.8 2 3 0.034 3.6 0.3 0.0 134 155 218 241 202 242 0.72 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 NAD_binding_9 PF13454.1 156 3.1e-05 16.8 2.8 3 3 6.6e-06 0.00072 12.4 0.1 112 155 321 366 311 367 0.85 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_15 - 247 TIGR03413 TIGR03413 248 1.2e-08 27.3 0.0 1 1 1.5e-10 1.6e-08 26.9 0.0 22 153 62 203 54 222 0.80 # 9957 # 10697 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.389 3_5 - 565 GIDA PF01134.17 392 2.8e-08 26.0 6.6 1 3 3.5e-10 3.7e-08 25.5 3.3 2 187 100 279 99 302 0.72 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 GIDA PF01134.17 392 2.8e-08 26.0 6.6 2 3 0.038 4.1 -0.9 0.0 3 31 273 301 271 315 0.84 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 GIDA PF01134.17 392 2.8e-08 26.0 6.6 3 3 0.018 2 0.1 0.1 349 385 393 429 387 433 0.77 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 NAD_binding_8 PF13450.1 68 3.8e-05 16.7 1.2 1 2 3.5e-07 3.8e-05 16.7 1.2 1 35 102 135 102 155 0.90 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 NAD_binding_8 PF13450.1 68 3.8e-05 16.7 1.2 2 2 0.041 4.4 0.5 0.2 1 25 274 298 274 303 0.81 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_16 - 584 Arch_ATPase PF01637.13 234 0.00089 12.0 0.0 1 2 0.0084 0.91 2.1 0.0 22 128 10 124 2 149 0.59 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 Arch_ATPase PF01637.13 234 0.00089 12.0 0.0 2 2 0.00019 0.021 7.5 0.0 15 62 322 366 313 469 0.59 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 PhoH PF02562.11 205 2.7e-08 26.3 0.6 1 2 2.6e-05 0.0028 9.9 0.1 21 63 10 52 2 110 0.87 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 PhoH PF02562.11 205 2.7e-08 26.3 0.6 2 2 2e-06 0.00022 13.5 0.0 12 47 318 355 308 379 0.79 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 AAA_5 PF07728.9 139 0.00036 13.3 0.1 1 2 0.014 1.5 1.6 0.0 2 31 11 43 10 66 0.76 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 AAA_5 PF07728.9 139 0.00036 13.3 0.1 2 2 8.6e-05 0.0093 8.7 0.0 3 46 331 374 330 431 0.78 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_19 - 696 TrwB_AAD_bind PF10412.4 386 1.4e-06 20.2 0.4 1 3 1.6e-05 0.0017 9.9 0.0 16 36 134 154 125 162 0.88 # 15653 # 17740 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.539 2_19 - 696 TrwB_AAD_bind PF10412.4 386 1.4e-06 20.2 0.4 2 3 9.3e-05 0.01 7.4 0.1 93 140 235 281 229 303 0.80 # 15653 # 17740 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.539 2_19 - 696 TrwB_AAD_bind PF10412.4 386 1.4e-06 20.2 0.4 3 3 0.083 8.9 -2.3 0.0 293 323 482 512 405 546 0.58 # 15653 # 17740 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.539 2_16 - 584 TIGR01968 TIGR01968 261 1.3e-13 43.6 3.3 1 3 3.5e-09 3.8e-07 22.4 0.2 8 39 14 45 11 51 0.94 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 TIGR01968 TIGR01968 261 1.3e-13 43.6 3.3 2 3 1.7e-08 1.8e-06 20.1 0.4 7 37 332 362 327 368 0.86 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 TIGR01968 TIGR01968 261 1.3e-13 43.6 3.3 3 3 0.083 9 -1.8 0.0 136 171 492 527 487 539 0.85 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 1_62 - 1017 AAA_18 PF13238.1 129 9e-05 15.8 1.2 1 1 7.4e-06 0.0004 13.7 0.0 2 19 492 509 492 568 0.77 # 39567 # 42617 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.470 2_16 - 584 AAA_18 PF13238.1 129 0.0041 10.5 1.9 1 2 0.01 0.55 3.6 0.1 2 21 12 31 11 63 0.78 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 AAA_18 PF13238.1 129 0.0041 10.5 1.9 2 2 0.0022 0.12 5.7 0.2 3 23 332 357 331 447 0.81 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 3_10 - 331 AAA_32 PF13654.1 509 0.0001 14.0 0.0 1 2 8.6e-06 0.00092 10.9 0.0 8 81 34 112 26 124 0.86 # 6419 # 7411 # 1 # ID=3_10;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.649 3_10 - 331 AAA_32 PF13654.1 509 0.0001 14.0 0.0 2 2 0.01 1.1 0.8 0.0 472 504 255 287 242 290 0.90 # 6419 # 7411 # 1 # ID=3_10;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.649 2_2 - 435 IMS_HHH PF11798.3 32 0.00011 15.3 0.0 1 1 2.8e-06 0.0003 13.9 0.0 2 32 182 212 181 212 0.84 # 470 # 1774 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.595 2_16 - 584 DUF258 PF03193.11 161 3e-05 16.3 0.0 1 2 0.0018 0.2 3.9 0.0 37 52 10 25 2 123 0.89 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 DUF258 PF03193.11 161 3e-05 16.3 0.0 2 2 2.4e-05 0.0026 10.0 0.0 34 59 326 351 307 396 0.80 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 3_20 - 989 Glycos_transf_1 PF00534.15 172 0.00015 14.2 0.0 1 1 2.8e-06 0.0003 13.2 0.0 31 118 280 373 276 374 0.90 # 13879 # 16845 # 1 # ID=3_20;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.605 3_10 - 331 TniB PF05621.6 302 2.3e-201 659.8 5.7 1 1 2.6e-203 2.8e-201 659.6 5.7 1 287 1 287 1 300 0.98 # 6419 # 7411 # 1 # ID=3_10;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.649 1_1 - 211 TIGR01406 TIGR01406 231 1.2e-08 27.6 0.0 1 1 1.7e-10 1.8e-08 27.0 0.0 4 88 106 184 104 188 0.87 # 70 # 702 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.613 1_49 - 388 DUF87 PF01935.12 229 0.0001 15.2 0.0 1 1 1.8e-06 0.0002 14.2 0.0 28 45 157 174 155 188 0.89 # 28191 # 29354 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 3_9 - 560 HTH_28 PF13518.1 52 9e-09 28.3 0.1 1 1 1.7e-09 3.7e-08 26.3 0.1 1 46 26 78 26 87 0.76 # 4737 # 6416 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.647 1_27 - 89 HTH_28 PF13518.1 52 6.7e-05 15.9 0.0 1 1 4.3e-06 9.4e-05 15.4 0.0 7 34 34 64 33 68 0.82 # 14993 # 15259 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.573 2_12 - 191 HTH_28 PF13518.1 52 9.3e-05 15.5 0.1 1 1 1.3e-05 0.00029 13.9 0.1 5 33 151 179 143 182 0.87 # 10026 # 10598 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.522 3_19 - 186 HTH_28 PF13518.1 52 0.00023 14.2 0.1 1 1 3.2e-05 0.00069 12.7 0.0 16 34 165 183 150 184 0.81 # 13319 # 13876 # 1 # ID=3_19;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.611 1_13 - 83 HTH_28 PF13518.1 52 0.00047 13.2 0.1 1 1 4.5e-05 0.00098 12.2 0.1 8 29 8 31 6 35 0.78 # 7541 # 7789 # 1 # ID=1_13;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.566 2_16 - 584 TIGR00041 TIGR00041 196 9e-05 14.9 0.0 1 2 0.0021 0.23 3.8 0.0 6 53 10 57 7 69 0.84 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 TIGR00041 TIGR00041 196 9e-05 14.9 0.0 2 2 8.4e-05 0.0091 8.4 0.0 11 56 334 379 327 399 0.79 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 3_1 - 143 MerR-DNA-bind PF09278.6 65 2.2e-21 69.1 0.6 1 1 9.4e-23 5.1e-21 68.0 0.5 1 65 51 113 51 113 0.95 # 2 # 430 # -1 # ID=3_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.594 3_6 - 121 MerR-DNA-bind PF09278.6 65 0.00086 12.8 7.4 1 1 2.5e-05 0.0014 12.1 7.4 1 64 47 108 47 109 0.85 # 3363 # 3725 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.697 2_1 - 72 TIGR01298 TIGR01298 200 7.7e-05 15.2 0.4 1 1 8e-07 8.7e-05 15.0 0.4 149 189 17 56 7 64 0.87 # 232 # 447 # 1 # ID=2_1;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.625 3_19 - 186 HTH_10 PF04967.7 53 0.00017 14.2 0.1 1 2 0.061 6.6 -0.5 0.1 3 30 124 152 123 154 0.66 # 13319 # 13876 # 1 # ID=3_19;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.611 3_19 - 186 HTH_10 PF04967.7 53 0.00017 14.2 0.1 2 2 1.1e-05 0.0012 11.5 0.0 29 45 167 183 156 184 0.92 # 13319 # 13876 # 1 # ID=3_19;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.611 3_5 - 565 TIGR01292 TIGR01292 300 1.8e-19 62.3 2.9 1 2 3.8e-05 0.0041 8.6 1.1 3 39 100 136 98 142 0.89 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 TIGR01292 TIGR01292 300 1.8e-19 62.3 2.9 2 2 1.1e-18 1.2e-16 53.1 0.0 142 296 270 428 213 430 0.81 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_49 - 388 Miro PF08477.8 119 0.001 12.6 0.0 1 1 2.1e-05 0.0023 11.5 0.0 4 28 157 186 156 220 0.72 # 28191 # 29354 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 1_13 - 83 HTH_31 PF13560.1 64 1.5e-09 31.0 0.3 1 1 5e-11 1.8e-09 30.8 0.3 9 56 9 55 6 72 0.90 # 7541 # 7789 # 1 # ID=1_13;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.566 1_22 - 160 HTH_31 PF13560.1 64 7.3e-07 22.4 1.2 1 2 0.0035 0.13 5.6 0.0 6 33 14 41 12 48 0.88 # 12694 # 13173 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 1_22 - 160 HTH_31 PF13560.1 64 7.3e-07 22.4 1.2 2 2 2.8e-06 0.0001 15.6 0.3 4 39 94 129 91 135 0.88 # 12694 # 13173 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 1_27 - 89 HTH_31 PF13560.1 64 2.2e-06 20.9 0.0 1 1 8.4e-08 3e-06 20.4 0.0 2 42 29 69 28 80 0.84 # 14993 # 15259 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.573 1_62 - 1017 DUF2075 PF09848.4 352 0.00042 12.3 0.0 1 1 1.1e-05 0.0012 10.8 0.0 5 22 492 509 489 533 0.86 # 39567 # 42617 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.470 1_49 - 388 T2SE PF00437.15 272 3.1e-23 75.0 0.0 1 1 4.6e-25 5e-23 74.3 0.0 11 269 24 303 15 306 0.78 # 28191 # 29354 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 3_9 - 560 HTH_Tnp_Mu_2 PF09039.6 108 1.1e-05 18.2 0.0 1 1 2.8e-07 3e-05 16.8 0.0 37 101 100 163 83 166 0.91 # 4737 # 6416 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.647 1_18 - 325 StbA PF06406.6 318 3.5e-157 515.2 0.2 1 1 3.7e-159 4e-157 515.1 0.2 1 318 1 322 1 322 0.99 # 10096 # 11070 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.556 2_16 - 584 NACHT PF05729.7 166 0.00021 14.0 2.4 1 2 0.029 1.5 1.4 0.1 2 19 10 27 9 40 0.79 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 NACHT PF05729.7 166 0.00021 14.0 2.4 2 2 3.2e-05 0.0017 11.0 0.3 4 28 331 355 329 406 0.87 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 1_49 - 388 NACHT PF05729.7 166 0.00037 13.2 0.0 1 1 1.3e-05 0.00071 12.3 0.0 4 29 156 181 154 188 0.83 # 28191 # 29354 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 1_62 - 1017 AAA_17 PF13207.1 121 5e-05 17.2 0.1 1 1 7.8e-06 0.00042 14.2 0.0 3 27 492 522 492 582 0.70 # 39567 # 42617 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.470 2_16 - 584 AAA_17 PF13207.1 121 0.00016 15.5 0.9 1 2 0.019 1 3.2 0.6 3 20 12 29 11 145 0.78 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 AAA_17 PF13207.1 121 0.00016 15.5 0.9 2 2 0.00019 0.01 9.7 0.0 6 32 334 362 331 456 0.57 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 3_5 - 565 FAD_binding_2 PF00890.19 417 4.6e-06 18.6 4.7 1 3 4.3e-08 4.6e-06 18.6 4.7 2 32 100 130 99 137 0.90 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 FAD_binding_2 PF00890.19 417 4.6e-06 18.6 4.7 2 3 0.034 3.7 -0.8 0.1 143 204 311 369 297 388 0.72 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 FAD_binding_2 PF00890.19 417 4.6e-06 18.6 4.7 3 3 0.074 8 -1.9 0.0 376 402 388 408 377 424 0.82 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_16 - 584 AAA_25 PF13481.1 194 6e-11 35.1 3.5 1 2 4.3e-05 0.0023 10.3 0.3 37 79 12 44 8 126 0.86 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 AAA_25 PF13481.1 194 6e-11 35.1 3.5 2 2 1.7e-09 9.1e-08 24.7 0.2 23 151 316 449 295 496 0.63 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 1_49 - 388 AAA_25 PF13481.1 194 6.2e-06 18.7 0.0 1 1 2.6e-07 1.4e-05 17.6 0.0 24 53 143 172 120 178 0.86 # 28191 # 29354 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 1_37 - 147 RepA_N PF06970.6 76 0.00089 12.1 0.0 1 1 1.7e-05 0.0018 11.1 0.0 15 44 56 85 54 90 0.92 # 20779 # 21219 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.553 2_16 - 584 RuvB_N PF05496.7 234 3.2e-07 22.6 0.1 1 2 0.016 1.8 0.5 0.0 52 72 10 30 5 49 0.76 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 RuvB_N PF05496.7 234 3.2e-07 22.6 0.1 2 2 3.8e-08 4.1e-06 19.0 0.0 51 119 328 400 300 407 0.80 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 1_18 - 325 Hydant_A_N PF05378.8 176 0.0011 11.5 3.9 1 4 0.08 8.6 -1.2 0.0 1 19 2 20 2 48 0.82 # 10096 # 11070 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.556 1_18 - 325 Hydant_A_N PF05378.8 176 0.0011 11.5 3.9 2 4 0.049 5.3 -0.5 0.0 108 154 38 86 15 103 0.67 # 10096 # 11070 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.556 1_18 - 325 Hydant_A_N PF05378.8 176 0.0011 11.5 3.9 3 4 0.057 6.1 -0.7 0.0 95 129 113 147 89 153 0.76 # 10096 # 11070 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.556 1_18 - 325 Hydant_A_N PF05378.8 176 0.0011 11.5 3.9 4 4 3.6e-05 0.0039 9.7 0.2 2 51 170 217 169 226 0.82 # 10096 # 11070 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.556 2_16 - 584 VirC1 PF07015.6 231 0.00011 14.3 1.1 1 2 0.001 0.11 4.5 0.0 9 40 15 46 10 61 0.89 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 VirC1 PF07015.6 231 0.00011 14.3 1.1 2 2 7.5e-05 0.0081 8.2 0.2 5 44 330 369 327 379 0.86 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 4_1 - 335 Transposase_20 PF02371.11 87 1.2e-24 79.3 0.2 1 1 2.3e-26 2.5e-24 78.3 0.2 2 78 210 286 209 296 0.94 # 257 # 1261 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.482 1_27 - 89 HTH_Tnp_ISL3 PF13542.1 52 0.0004 12.6 0.0 1 1 5e-06 0.00054 12.2 0.0 19 49 35 64 33 65 0.91 # 14993 # 15259 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.573 3_1 - 143 MerR PF00376.18 38 8.5e-14 43.9 0.2 1 1 2.9e-15 1.6e-13 43.1 0.2 1 38 9 46 9 46 0.99 # 2 # 430 # -1 # ID=3_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.594 3_6 - 121 MerR PF00376.18 38 1.3e-06 20.9 0.0 1 1 3.9e-08 2.1e-06 20.3 0.0 1 38 5 42 5 42 0.95 # 3363 # 3725 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.697 2_16 - 584 AAA_33 PF13671.1 143 0.0013 11.6 0.8 1 2 0.073 7.9 -0.6 0.0 3 31 12 45 11 88 0.71 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 AAA_33 PF13671.1 143 0.0013 11.6 0.8 2 2 7.1e-05 0.0077 9.1 0.3 1 41 329 377 329 475 0.68 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_12 - 191 CENP-B_N PF04218.8 53 0.00023 13.6 0.0 1 1 1.1e-05 0.00058 12.3 0.0 26 46 162 182 154 186 0.89 # 10026 # 10598 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.522 1_27 - 89 CENP-B_N PF04218.8 53 0.0015 11.0 0.0 1 1 3.8e-05 0.002 10.6 0.0 24 49 44 69 34 72 0.88 # 14993 # 15259 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.573 2_16 - 584 ArgK PF03308.11 267 4.1e-07 22.0 0.3 1 2 1e-05 0.0011 10.7 0.1 34 71 13 50 9 54 0.93 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 ArgK PF03308.11 267 4.1e-07 22.0 0.3 2 2 4.2e-05 0.0045 8.7 0.0 34 71 332 369 307 389 0.86 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 1_49 - 388 Ribosomal_S5 PF00333.15 67 3.3e-05 16.6 0.1 1 2 0.00091 0.098 5.5 0.0 26 45 84 103 76 114 0.83 # 28191 # 29354 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 1_49 - 388 Ribosomal_S5 PF00333.15 67 3.3e-05 16.6 0.1 2 2 0.00012 0.013 8.4 0.0 21 54 242 274 230 278 0.91 # 28191 # 29354 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 2_16 - 584 RNA_helicase PF00910.17 107 0.00084 12.6 0.2 1 2 0.037 2 1.7 0.0 2 18 12 28 11 50 0.80 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 RNA_helicase PF00910.17 107 0.00084 12.6 0.2 2 2 0.00039 0.021 8.1 0.0 2 25 331 354 330 378 0.86 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 1_49 - 388 RNA_helicase PF00910.17 107 0.0012 12.1 0.0 1 1 4.9e-05 0.0027 10.9 0.0 3 26 157 180 156 197 0.81 # 28191 # 29354 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 2_16 - 584 Gtr1_RagA PF04670.7 232 0.0012 11.0 0.4 1 2 0.018 2 0.5 0.1 2 16 11 25 10 27 0.87 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 Gtr1_RagA PF04670.7 232 0.0012 11.0 0.4 2 2 0.00015 0.017 7.3 0.1 3 19 331 347 329 376 0.88 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 APS_kinase PF01583.15 157 1.8e-06 20.7 0.2 1 2 1.9e-05 0.0021 10.8 0.0 4 37 10 43 7 52 0.89 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 APS_kinase PF01583.15 157 1.8e-06 20.7 0.2 2 2 0.00018 0.02 7.6 0.1 6 37 331 362 327 387 0.83 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 NTPase_1 PF03266.10 168 3.4e-05 16.6 1.9 1 3 0.0016 0.17 4.6 0.1 2 29 11 38 10 52 0.82 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 NTPase_1 PF03266.10 168 3.4e-05 16.6 1.9 2 3 0.052 5.6 -0.4 0.0 107 148 179 219 174 248 0.69 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 NTPase_1 PF03266.10 168 3.4e-05 16.6 1.9 3 3 5.5e-05 0.006 9.3 0.2 4 30 332 358 330 362 0.91 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 3_5 - 565 AlaDh_PNT_C PF01262.16 168 2.6e-05 16.9 3.1 1 2 0.00051 0.056 6.0 0.8 15 50 92 127 89 130 0.90 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 AlaDh_PNT_C PF01262.16 168 2.6e-05 16.9 3.1 2 2 2.1e-05 0.0023 10.5 0.1 16 58 265 307 257 339 0.84 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_16 - 584 3HCDH_N PF02737.13 180 0.00059 12.5 0.0 1 1 4e-05 0.0022 10.7 0.0 5 35 338 368 336 409 0.75 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 3_5 - 565 3HCDH_N PF02737.13 180 0.0034 10.0 6.4 1 2 0.0095 0.51 2.9 2.4 1 30 99 128 99 134 0.93 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 3HCDH_N PF02737.13 180 0.0034 10.0 6.4 2 2 0.00018 0.0098 8.6 0.1 2 39 272 309 271 348 0.73 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_27 - 89 Phage_CII PF05269.6 91 0.00078 12.5 0.0 1 1 9.2e-06 0.00099 12.2 0.0 17 45 36 64 32 81 0.83 # 14993 # 15259 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.573 3_5 - 565 Glyco_transf_4 PF13439.1 177 6.6e-06 19.0 0.1 1 1 1.3e-07 1.4e-05 17.8 0.1 13 40 276 303 272 356 0.82 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_16 - 584 ATP_bind_1 PF03029.12 238 4.1e-05 16.2 2.7 1 2 0.002 0.11 5.0 0.1 2 37 14 49 13 53 0.90 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 ATP_bind_1 PF03029.12 238 4.1e-05 16.2 2.7 2 2 6e-05 0.0033 10.0 0.2 2 37 333 368 332 371 0.95 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 1_49 - 388 ATP_bind_1 PF03029.12 238 0.00088 11.8 0.0 1 1 2.6e-05 0.0014 11.2 0.0 1 25 157 181 157 191 0.84 # 28191 # 29354 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 1_53 - 66 DDE_Tnp_IS240 PF13610.1 140 0.00012 15.0 0.0 1 1 1.2e-06 0.00013 14.9 0.0 29 64 18 52 5 58 0.83 # 33458 # 33655 # -1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.449 2_12 - 191 HTH_26 PF13443.1 63 6.4e-05 16.2 0.0 1 1 2.6e-06 0.00014 15.1 0.0 6 42 154 189 151 190 0.88 # 10026 # 10598 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.522 1_27 - 89 HTH_26 PF13443.1 63 0.00029 14.1 0.0 1 1 7.2e-06 0.00039 13.7 0.0 11 47 43 78 33 82 0.90 # 14993 # 15259 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.573 2_12 - 191 HTH_17 PF12728.2 51 0.00014 15.2 1.5 1 2 0.0028 0.3 4.5 0.2 26 45 134 153 119 157 0.82 # 10026 # 10598 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.522 2_12 - 191 HTH_17 PF12728.2 51 0.00014 15.2 1.5 2 2 8.2e-05 0.0089 9.4 0.1 6 22 163 179 161 184 0.88 # 10026 # 10598 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.522 2_12 - 191 MarR_2 PF12802.2 62 0.00025 13.8 0.1 1 2 0.061 6.5 -0.4 0.0 30 53 68 91 66 96 0.84 # 10026 # 10598 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.522 2_12 - 191 MarR_2 PF12802.2 62 0.00025 13.8 0.1 2 2 2.1e-05 0.0023 10.7 0.1 22 43 159 180 150 182 0.84 # 10026 # 10598 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.522 2_16 - 584 PIF1 PF05970.9 364 0.00017 13.6 0.1 1 2 0.00051 0.055 5.3 0.0 20 56 6 42 2 49 0.83 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 PIF1 PF05970.9 364 0.00017 13.6 0.1 2 2 0.00056 0.06 5.2 0.0 13 58 318 363 308 379 0.83 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_18 - 118 HTH_5 PF01022.15 47 2.3e-20 65.1 1.1 1 1 3.3e-22 3.5e-20 64.5 1.1 1 45 15 60 15 62 0.98 # 14997 # 15350 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.537 2_12 - 191 TrmB PF01978.14 68 4.7e-05 16.1 0.0 1 1 9.1e-07 9.8e-05 15.1 0.0 19 44 155 180 150 185 0.89 # 10026 # 10598 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.522 3_5 - 565 Pyr_redox_2 PF07992.9 201 8.6e-44 142.8 0.0 1 1 3.2e-45 3.5e-43 140.8 0.0 2 199 100 410 99 412 0.96 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 DFP PF04127.10 185 0.00084 12.0 2.4 1 2 0.00039 0.043 6.4 0.4 28 51 105 128 99 156 0.83 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 DFP PF04127.10 185 0.00084 12.0 2.4 2 2 0.0014 0.15 4.7 0.1 32 53 281 302 276 336 0.77 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_27 - 89 HTH_Crp_2 PF13545.1 76 0.00049 12.9 0.0 1 1 6.6e-06 0.00071 12.4 0.0 26 50 40 64 32 65 0.88 # 14993 # 15259 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.573 3_5 - 565 DAO PF01266.19 358 4.6e-09 28.6 11.7 1 3 1.4e-08 1.5e-06 20.3 0.7 1 38 99 134 99 190 0.84 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 DAO PF01266.19 358 4.6e-09 28.6 11.7 2 3 0.032 3.4 -0.6 0.1 3 31 273 301 271 307 0.75 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 DAO PF01266.19 358 4.6e-09 28.6 11.7 3 3 9.4e-07 0.0001 14.3 0.5 152 208 314 372 307 433 0.74 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_1 - 211 RNase_T PF00929.19 164 8.7e-12 38.6 0.0 1 1 2.2e-13 1.2e-11 38.2 0.0 1 87 105 183 105 189 0.93 # 70 # 702 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.613 2_1 - 72 RNase_T PF00929.19 164 5.4e-07 23.0 0.0 1 1 1.1e-08 6e-07 22.9 0.0 118 163 3 51 1 52 0.87 # 232 # 447 # 1 # ID=2_1;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.625 1_62 - 1017 AAA_10 PF12846.2 304 9.5e-41 133.1 0.0 1 1 7.3e-42 2e-40 132.1 0.0 5 297 492 884 489 889 0.91 # 39567 # 42617 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.470 2_19 - 696 AAA_10 PF12846.2 304 2.5e-10 33.2 0.1 1 1 1.3e-11 3.5e-10 32.7 0.1 2 292 134 503 133 514 0.76 # 15653 # 17740 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.539 1_49 - 388 AAA_10 PF12846.2 304 1.5e-06 20.8 0.0 1 1 3.3e-07 8.9e-06 18.3 0.0 3 27 154 178 152 196 0.74 # 28191 # 29354 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 2_16 - 584 AAA_10 PF12846.2 304 8.6e-06 18.3 0.9 1 2 0.00048 0.013 7.9 0.0 3 56 10 65 8 99 0.80 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 AAA_10 PF12846.2 304 8.6e-06 18.3 0.9 2 2 0.00038 0.01 8.2 0.1 3 44 329 372 327 420 0.80 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_18 - 118 HTH_20 PF12840.2 61 1.9e-12 39.9 0.4 1 1 5.5e-14 2.9e-12 39.3 0.4 2 61 8 67 7 67 0.97 # 14997 # 15350 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.537 2_12 - 191 HTH_20 PF12840.2 61 1.9e-05 17.5 0.1 1 2 0.081 4.4 0.3 0.0 33 52 8 27 6 28 0.89 # 10026 # 10598 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.522 2_12 - 191 HTH_20 PF12840.2 61 1.9e-05 17.5 0.1 2 2 1.7e-05 0.00092 12.1 0.1 3 43 110 177 108 181 0.91 # 10026 # 10598 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.522 2_16 - 584 ArsA_ATPase PF02374.10 305 1.6e-131 430.9 0.0 1 3 5e-92 2.7e-90 295.4 0.0 2 300 9 292 8 296 0.97 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 ArsA_ATPase PF02374.10 305 1.6e-131 430.9 0.0 2 3 2.9e-34 1.6e-32 105.7 0.0 5 158 331 472 327 483 0.92 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 ArsA_ATPase PF02374.10 305 1.6e-131 430.9 0.0 3 3 7e-10 3.8e-08 25.7 0.0 200 299 483 581 473 583 0.86 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_13 - 125 ArsA_ATPase PF02374.10 305 2.3e-12 39.5 0.0 1 1 4.6e-14 2.5e-12 39.4 0.0 200 300 24 123 8 124 0.93 # 10637 # 11011 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.533 2_16 - 584 AAA_31 PF13614.1 157 3.1e-12 39.7 0.2 1 2 1.5e-08 1.6e-06 21.1 0.0 4 127 11 145 9 155 0.74 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 AAA_31 PF13614.1 157 3.1e-12 39.7 0.2 2 2 6.3e-06 0.00068 12.6 0.0 9 43 335 369 329 413 0.74 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 TIGR02397 TIGR02397 355 0.00014 13.9 0.4 1 2 0.00039 0.043 5.7 0.1 38 53 9 25 4 34 0.77 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 TIGR02397 TIGR02397 355 0.00014 13.9 0.4 2 2 0.00035 0.038 5.8 0.0 40 60 331 351 318 361 0.89 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 3_12 - 280 Pterin_bind PF00809.17 210 2.8e-58 189.7 0.0 1 1 3e-60 3.3e-58 189.5 0.0 1 210 7 216 7 216 0.98 # 8008 # 8847 # -1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.617 2_16 - 584 IstB_IS21 PF01695.12 178 7e-11 34.8 0.1 1 2 1.4e-06 0.00015 14.2 0.0 50 84 11 45 2 50 0.90 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_16 - 584 IstB_IS21 PF01695.12 178 7e-11 34.8 0.1 2 2 2.1e-07 2.3e-05 16.9 0.0 50 83 330 363 313 384 0.86 # 12818 # 14569 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.514 1_40 - 145 SSB PF00436.20 104 3.5e-32 103.4 0.2 1 1 3.8e-34 4.1e-32 103.2 0.2 2 103 7 111 6 112 0.96 # 21995 # 22429 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.487 1_49 - 388 GTP_EFTU PF00009.22 188 0.0012 11.3 0.0 1 1 2e-05 0.0021 10.5 0.0 8 34 157 183 155 195 0.87 # 28191 # 29354 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/b46cf183-5cfa-4995-8002-f875b4cadaab # Target file: checkm_output/bins/pm2089/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm2089/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/b46cf183-5cfa-4995-8002-f875b4cadaab checkm_output/bins/pm2089/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:59:50 2017 # [ok]