# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_2 - 488 KaiC PF06745.8 227 4.6e-06 15.7 0.0 1 1 6.5e-07 7.9e-06 15.0 0.0 18 53 153 188 149 191 0.93 # 843 # 2306 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.637 1_2 - 488 FtsK_SpoIIIE PF01580.13 205 4.7e-05 12.8 0.0 1 1 7.4e-06 8.8e-05 11.9 0.0 20 62 134 179 126 181 0.82 # 843 # 2306 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.637 1_9 - 562 DUF3584 PF12128.3 1201 0.013 2.6 21.2 1 2 9.7e-05 0.0012 6.1 1.9 599 657 321 379 313 387 0.82 # 6836 # 8521 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.512 1_9 - 562 DUF3584 PF12128.3 1201 0.013 2.6 21.2 2 2 0.0012 0.015 2.4 11.1 608 674 399 465 390 470 0.87 # 6836 # 8521 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.512 1_2 - 488 TrwB_AAD_bind PF10412.4 386 1.8e-05 13.3 0.0 1 1 2.2e-06 2.7e-05 12.8 0.0 14 54 153 194 144 202 0.86 # 843 # 2306 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.637 1_8 - 82 TIGR01059 TIGR01059 639 2e-05 12.8 1.5 1 1 1.8e-06 2.2e-05 12.6 1.5 333 394 2 67 1 74 0.81 # 6264 # 6509 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.606 1_5 - 53 HTH_17 PF12728.2 51 7.3e-05 13.0 0.1 1 1 6.2e-06 7.4e-05 13.0 0.1 1 30 3 31 3 46 0.81 # 4011 # 4169 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.566 1_2 - 488 AAA_10 PF12846.2 304 1.2e-11 34.4 0.0 1 2 1.1e-09 1.3e-08 24.5 0.0 3 68 156 225 154 267 0.83 # 843 # 2306 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.637 1_2 - 488 AAA_10 PF12846.2 304 1.2e-11 34.4 0.0 2 2 0.00012 0.0014 7.9 0.0 196 293 337 433 323 440 0.73 # 843 # 2306 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.637 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/26959ce8-6c39-4d8f-aceb-bc3e2b0ccb64 # Target file: checkm_output/bins/pm2086/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm2086/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/26959ce8-6c39-4d8f-aceb-bc3e2b0ccb64 checkm_output/bins/pm2086/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:59:45 2017 # [ok]