# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_5 - 134 HTH_IclR PF09339.5 52 2.3e-06 16.2 0.4 1 1 6.9e-07 4.1e-06 15.4 0.4 19 40 4 25 1 26 0.90 # 4745 # 5146 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.478 1_5 - 134 MerR_1 PF13411.1 69 3.1e-05 12.7 0.1 1 1 1.7e-05 0.0001 11.1 0.0 2 30 5 33 4 41 0.86 # 4745 # 5146 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.478 1_5 - 134 HTH_23 PF13384.1 50 6.9e-06 14.7 0.1 1 1 2.6e-06 1.6e-05 13.6 0.1 18 40 4 26 1 26 0.91 # 4745 # 5146 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.478 1_5 - 134 HTH_28 PF13518.1 52 2.1e-05 13.5 0.1 1 1 1.1e-05 6.8e-05 11.9 0.1 13 35 4 26 2 28 0.92 # 4745 # 5146 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.478 1_5 - 134 HTH_24 PF13412.1 48 3.9e-05 12.0 0.3 1 1 1.3e-05 7.6e-05 11.1 0.3 16 39 2 25 2 26 0.94 # 4745 # 5146 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.478 1_5 - 134 MerR PF00376.18 38 1.4e-05 13.6 0.0 1 1 4.9e-06 3e-05 12.6 0.0 1 23 5 27 5 34 0.92 # 4745 # 5146 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.478 1_5 - 134 HTH_17 PF12728.2 51 2e-09 26.6 0.0 1 1 5.9e-10 3.5e-09 25.8 0.0 3 45 5 48 4 50 0.83 # 4745 # 5146 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.478 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/f05b8052-a163-41df-976c-4d9cd315d327 # Target file: checkm_output/bins/pm2079/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm2079/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/f05b8052-a163-41df-976c-4d9cd315d327 checkm_output/bins/pm2079/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:59:34 2017 # [ok]