# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_3 - 380 HTH_3 PF01381.17 55 4.7e-15 43.7 0.0 1 1 2.6e-15 1e-14 42.6 0.0 1 52 9 63 9 65 0.94 # 2016 # 3155 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.366 1_3 - 380 HTH_19 PF12844.2 64 6.6e-12 33.8 0.0 1 1 4e-12 1.6e-11 32.6 0.0 3 49 8 57 6 65 0.92 # 2016 # 3155 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.366 1_3 - 380 HTH_31 PF13560.1 64 1.3e-11 33.0 0.0 1 1 5.7e-12 2.3e-11 32.3 0.0 3 53 6 58 4 64 0.88 # 2016 # 3155 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.366 1_3 - 380 DNA_methylase PF00145.12 335 7.3e-113 365.3 0.2 1 1 2.3e-113 9e-113 365.0 0.2 1 334 72 374 72 375 0.97 # 2016 # 3155 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.366 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/cbb655bc-5a1d-4138-998d-709d1a335b7a # Target file: checkm_output/bins/pm2071/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm2071/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/cbb655bc-5a1d-4138-998d-709d1a335b7a checkm_output/bins/pm2071/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:59:23 2017 # [ok]