# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_5 - 180 zf-ribbon_3 PF13248.1 26 0.00011 10.9 0.1 1 2 0.053 0.42 -0.6 0.2 3 10 74 81 72 90 0.78 # 3162 # 3701 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.570 1_5 - 180 zf-ribbon_3 PF13248.1 26 0.00011 10.9 0.1 2 2 1.3e-05 0.00011 10.9 0.1 18 24 94 100 92 108 0.70 # 3162 # 3701 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.570 1_5 - 180 Ribosomal_S27e PF01667.12 55 8.4e-06 14.7 0.9 1 1 2e-06 1.6e-05 13.9 0.9 5 33 71 99 68 104 0.90 # 3162 # 3701 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.570 1_8 - 276 Pterin_bind PF00809.17 210 2.4e-61 196.1 0.0 1 1 3.6e-62 2.8e-61 195.8 0.0 1 209 14 220 14 221 0.98 # 5373 # 6200 # -1 # ID=1_8;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.606 1_5 - 180 NOB1_Zn_bind PF08772.6 73 8.8e-06 14.9 0.3 1 1 2.1e-06 1.7e-05 14.1 0.3 10 36 74 104 71 125 0.78 # 3162 # 3701 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.570 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/45804ad3-26ef-4068-a2c2-ee5fe821ad9b # Target file: checkm_output/bins/pm2067/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm2067/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/45804ad3-26ef-4068-a2c2-ee5fe821ad9b checkm_output/bins/pm2067/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:59:09 2017 # [ok]