# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_5 - 99 DUF3173 PF11372.3 59 4.7e-06 15.6 0.3 1 2 2.3e-05 0.00018 10.5 0.1 8 25 21 38 19 77 0.80 # 3355 # 3651 # -1 # ID=1_5;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.529 1_5 - 99 DUF3173 PF11372.3 59 4.7e-06 15.6 0.3 2 2 0.0022 0.018 4.1 0.1 13 33 58 78 54 94 0.81 # 3355 # 3651 # -1 # ID=1_5;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.529 1_8 - 130 NmrA PF05368.8 233 2.1e-06 16.4 0.5 1 2 1.7e-05 0.00013 10.5 0.1 188 228 45 85 22 91 0.90 # 4426 # 4815 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_8 - 130 NmrA PF05368.8 233 2.1e-06 16.4 0.5 2 2 0.0011 0.0086 4.6 0.0 196 223 102 129 91 129 0.86 # 4426 # 4815 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/10015615-1796-4b1f-9135-869fcb538167 # Target file: checkm_output/bins/pm2054/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm2054/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/10015615-1796-4b1f-9135-869fcb538167 checkm_output/bins/pm2054/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:58:55 2017 # [ok]