# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_1 - 104 zf-ribbon_3 PF13248.1 26 0.00035 9.5 7.9 1 1 0.00019 0.0019 7.2 6.2 3 25 74 101 72 102 0.65 # 2 # 313 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.603 1_5 - 345 DDE_Tnp_1 PF01609.16 213 3e-25 78.6 0.0 1 1 4.6e-26 4.6e-25 78.0 0.0 4 190 91 306 88 315 0.93 # 3213 # 4247 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.440 1_1 - 104 Ribosomal_S27e PF01667.12 55 1e-05 14.8 1.4 1 1 1.7e-06 1.7e-05 14.0 1.4 5 33 71 99 68 102 0.90 # 2 # 313 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.603 1_1 - 104 zinc_ribbon_4 PF13717.1 36 1.1e-05 14.8 1.1 1 2 6.6e-05 0.00066 9.1 0.1 2 14 73 85 73 88 0.85 # 2 # 313 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.603 1_1 - 104 zinc_ribbon_4 PF13717.1 36 1.1e-05 14.8 1.1 2 2 0.0024 0.024 4.1 0.1 5 11 95 101 94 103 0.85 # 2 # 313 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.603 1_1 - 104 zinc_ribbon_5 PF13719.1 37 4.3e-06 16.0 0.6 1 2 4.1e-05 0.00041 9.7 0.0 2 14 73 85 72 88 0.84 # 2 # 313 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.603 1_1 - 104 zinc_ribbon_5 PF13719.1 37 4.3e-06 16.0 0.6 2 2 0.002 0.02 4.3 0.2 5 11 95 101 94 103 0.86 # 2 # 313 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.603 1_1 - 104 Zn-ribbon_8 PF09723.5 42 0.00059 9.5 6.6 1 1 2.9e-05 0.00029 10.5 4.4 7 35 75 101 74 104 0.90 # 2 # 313 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.603 1_1 - 104 zinc_ribbon_2 PF13240.1 23 0.0033 6.7 8.3 1 2 0.013 0.13 1.6 0.1 1 9 75 83 75 85 0.75 # 2 # 313 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.603 1_1 - 104 zinc_ribbon_2 PF13240.1 23 0.0033 6.7 8.3 2 2 0.00011 0.0011 8.2 1.2 15 21 94 100 93 101 0.63 # 2 # 313 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.603 1_9 - 101 TIGR01455 TIGR01455 442 2.5e-34 108.0 0.5 1 1 2.9e-35 2.9e-34 107.7 0.5 1 77 6 81 6 83 0.96 # 7327 # 7629 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.578 1_5 - 345 Dimerisation PF08100.6 51 3.2e-05 13.4 0.2 1 1 2.4e-05 0.00024 10.7 0.0 16 47 29 65 27 66 0.80 # 3213 # 4247 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.440 1_8 - 272 Pterin_bind PF00809.17 210 2.8e-61 196.1 0.0 1 1 3.4e-62 3.4e-61 195.9 0.0 1 209 10 216 10 217 0.98 # 6425 # 7240 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.608 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/c152bd60-75d0-4505-b1bc-99a644af6a33 # Target file: checkm_output/bins/pm2052/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm2052/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/c152bd60-75d0-4505-b1bc-99a644af6a33 checkm_output/bins/pm2052/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:58:52 2017 # [ok]