#                                                                            --- full sequence --- -------------- this domain -------------   hmm coord   ali coord   env coord
# target name        accession   tlen query name           accession   qlen   E-value  score  bias   #  of  c-Evalue  i-Evalue  score  bias  from    to  from    to  from    to  acc description of target
#------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- ---------------------
1_3                  -            231 RepC                 PF06504.6    283   6.9e-07   16.3   0.0   1   1   2.9e-07   8.8e-07   16.0   0.0   134   202    68   138    21   157 0.76 # 3199 # 3891 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.434
1_3                  -            231 Rep_3                PF01051.16   222   4.7e-60  190.8   4.5   1   1   1.8e-60   5.3e-60  190.6   4.5     3   222     4   220     2   220 0.94 # 3199 # 3891 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.434
1_3                  -            231 RPA                  PF10134.4    229     9e-07   16.3   0.7   1   1   4.2e-07   1.3e-06   15.8   0.7    50   212    26   180    13   189 0.71 # 3199 # 3891 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.434
#
# Program:         hmmsearch
# Version:         3.1b1 (May 2013)
# Pipeline mode:   SEARCH
# Query file:      /tmp/a88e0d01-4b13-4108-a8b2-70e120502351
# Target file:     checkm_output/bins/pm2041/genes.faa
# Option settings: hmmsearch --domtblout checkm_output/bins/pm2041/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/a88e0d01-4b13-4108-a8b2-70e120502351 checkm_output/bins/pm2041/genes.faa 
# Current dir:     /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887
# Date:            Thu Nov 30 09:58:35 2017
# [ok]