# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_3 - 50 HTH_8 PF02954.14 42 2.7e-12 34.1 0.1 1 1 1e-12 3.1e-12 33.9 0.1 6 42 11 47 6 47 0.92 # 2913 # 3062 # -1 # ID=1_3;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.433 1_3 - 50 HTH_37 PF13744.1 80 9.7e-06 13.4 0.8 1 1 3.6e-06 1.1e-05 13.3 0.8 23 53 15 45 4 48 0.87 # 2913 # 3062 # -1 # ID=1_3;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.433 1_3 - 50 HTH_23 PF13384.1 50 4.2e-06 14.4 0.0 1 1 1.5e-06 4.6e-06 14.3 0.0 16 41 21 47 7 48 0.86 # 2913 # 3062 # -1 # ID=1_3;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.433 1_3 - 50 HTH_28 PF13518.1 52 1.5e-05 13.0 0.0 1 1 6.5e-06 2e-05 12.6 0.0 14 35 25 46 15 48 0.85 # 2913 # 3062 # -1 # ID=1_3;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.433 1_3 - 50 MerR PF00376.18 38 3.5e-05 11.4 0.0 1 1 1.5e-05 4.4e-05 11.1 0.0 4 22 28 46 27 49 0.86 # 2913 # 3062 # -1 # ID=1_3;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.433 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/ddd68bab-dd22-4adf-ac9a-742a0f7bb72a # Target file: checkm_output/bins/pm2002/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm2002/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/ddd68bab-dd22-4adf-ac9a-742a0f7bb72a checkm_output/bins/pm2002/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:57:39 2017 # [ok]