# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_5 - 284 RepC PF06504.6 283 6.7e-157 509.9 0.1 1 1 9.6e-158 7.6e-157 509.7 0.1 7 279 3 273 1 277 0.98 # 4668 # 5519 # 1 # ID=1_5;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.644 1_4 - 288 AAA_25 PF13481.1 194 1e-43 138.3 0.1 1 1 1.9e-44 1.5e-43 137.7 0.1 15 193 9 183 4 184 0.90 # 3818 # 4681 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.660 1_1 - 144 DAO PF01266.19 358 1.4e-06 16.6 0.2 1 1 2e-07 1.6e-06 16.5 0.2 87 161 45 120 4 122 0.85 # 2 # 433 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.572 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/238c36c6-e698-4d5d-ad96-201cec498262 # Target file: checkm_output/bins/pm1994/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1994/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/238c36c6-e698-4d5d-ad96-201cec498262 checkm_output/bins/pm1994/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:57:22 2017 # [ok]