# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 2_19 - 332 ATP-synt_ab PF00006.20 215 0.00094 12.4 0.0 1 1 8.8e-06 0.0015 11.7 0.0 16 62 159 205 151 247 0.86 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_10 - 228 Cons_hypoth95 PF03602.10 183 2.3e-05 17.5 0.0 1 2 0.00041 0.071 6.1 0.0 112 146 18 54 8 81 0.66 # 6732 # 7415 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_10 - 228 Cons_hypoth95 PF03602.10 183 2.3e-05 17.5 0.0 2 2 4e-05 0.0069 9.4 0.0 41 62 162 183 145 218 0.78 # 6732 # 7415 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 2_19 - 332 KaiC PF06745.8 227 0.00029 13.6 0.0 1 1 3e-06 0.00052 12.8 0.0 16 53 155 190 148 240 0.77 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_43 - 251 HTH_IclR PF09339.5 52 4.5e-11 35.9 0.0 1 1 9.1e-13 7.8e-11 35.1 0.0 1 50 8 56 8 58 0.97 # 34671 # 35423 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.494 8_2 - 186 HTH_IclR PF09339.5 52 2.1e-05 17.7 0.2 1 1 9.2e-07 7.9e-05 15.9 0.0 15 40 155 180 151 181 0.85 # 435 # 992 # 1 # ID=8_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 1_50 - 358 ABC_tran PF00005.22 137 8.8e-36 116.9 0.0 1 1 5.3e-37 1.8e-35 115.9 0.0 1 136 17 159 17 160 0.90 # 41330 # 42403 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.617 2_19 - 332 ABC_tran PF00005.22 137 2.7e-06 21.4 0.0 1 1 1.2e-07 4.3e-06 20.8 0.0 6 45 153 192 150 257 0.87 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_32 - 522 ABC_tran PF00005.22 137 0.00027 14.9 0.0 1 1 2.4e-05 0.00081 13.4 0.0 14 113 27 155 17 158 0.73 # 27132 # 28697 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 2_12 - 867 ABC_tran PF00005.22 137 0.0012 12.9 0.0 1 1 0.00011 0.0039 11.2 0.0 14 38 494 518 481 550 0.83 # 4273 # 6873 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 4_15 - 876 ABC_tran PF00005.22 137 0.0017 12.4 0.0 1 1 0.00015 0.005 10.8 0.0 13 102 481 610 476 619 0.60 # 8001 # 10628 # -1 # ID=4_15;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.533 8_2 - 186 HTH_22 PF13309.1 64 0.00049 13.6 1.5 1 1 1.2e-05 0.002 11.6 0.1 35 63 156 179 143 180 0.76 # 435 # 992 # 1 # ID=8_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 7_1 - 239 TIGR01173 TIGR01173 452 4.8e-08 25.5 0.2 1 1 4e-10 6.8e-08 25.0 0.2 390 430 109 149 100 158 0.89 # 3 # 719 # -1 # ID=7_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.492 1_10 - 228 TIGR00095 TIGR00095 194 0.00056 13.0 0.0 1 2 0.0016 0.27 4.2 0.0 124 138 20 34 9 79 0.75 # 6732 # 7415 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_10 - 228 TIGR00095 TIGR00095 194 0.00056 13.0 0.0 2 2 0.00024 0.042 6.8 0.0 53 86 164 199 155 218 0.77 # 6732 # 7415 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 2_38 - 422 HHH_5 PF14520.1 60 4.6e-07 23.7 0.5 1 1 7.2e-08 1.2e-05 19.1 0.6 8 55 181 278 177 282 0.65 # 27466 # 28731 # -1 # ID=2_38;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.538 1_1 - 181 N6_Mtase PF02384.11 311 0.00041 13.1 0.0 1 2 1.5e-05 0.0026 10.5 0.0 28 64 32 68 21 83 0.87 # 469 # 1011 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.589 1_1 - 181 N6_Mtase PF02384.11 311 0.00041 13.1 0.0 2 2 0.018 3.1 0.4 0.0 127 137 114 124 103 132 0.82 # 469 # 1011 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.589 1_53 - 124 rve_3 PF13683.1 67 4.8e-13 42.2 0.0 1 1 4.3e-15 7.4e-13 41.6 0.0 6 58 44 96 40 105 0.89 # 44405 # 44776 # -1 # ID=1_53;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 2_19 - 332 Sigma54_activat PF00158.21 168 1.4e-05 18.2 0.0 1 1 3.1e-07 2.7e-05 17.4 0.0 14 54 150 190 138 213 0.82 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 2_26 - 1079 Sigma54_activat PF00158.21 168 0.00029 14.0 0.4 1 1 9.5e-06 0.00081 12.5 0.4 8 130 480 600 473 606 0.79 # 15675 # 18911 # -1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 1_50 - 358 Adeno_IVa2 PF02456.10 370 0.0018 10.6 0.0 1 1 2.2e-05 0.0038 9.5 0.0 90 116 30 53 5 72 0.75 # 41330 # 42403 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.617 2_19 - 332 FtsK_SpoIIIE PF01580.13 205 1.5e-06 21.5 0.0 1 1 8.5e-08 2.9e-06 20.5 0.0 38 64 158 184 139 191 0.81 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 4_19 - 107 FtsK_SpoIIIE PF01580.13 205 2.2e-06 20.9 0.0 1 1 7.6e-08 2.6e-06 20.7 0.0 9 66 41 100 34 103 0.81 # 11900 # 12220 # -1 # ID=4_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 2_12 - 867 FtsK_SpoIIIE PF01580.13 205 2e-05 17.8 0.0 1 1 1.4e-06 4.7e-05 16.6 0.0 21 62 462 515 445 522 0.82 # 4273 # 6873 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 4_15 - 876 FtsK_SpoIIIE PF01580.13 205 3e-05 17.2 0.2 1 2 1e-05 0.00035 13.7 0.0 39 63 476 504 463 507 0.84 # 8001 # 10628 # -1 # ID=4_15;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.533 4_15 - 876 FtsK_SpoIIIE PF01580.13 205 3e-05 17.2 0.2 2 2 0.09 3.1 0.9 0.0 75 166 530 625 529 634 0.75 # 8001 # 10628 # -1 # ID=4_15;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.533 2_27 - 510 FtsK_SpoIIIE PF01580.13 205 0.0011 12.1 0.0 1 1 5.7e-05 0.002 11.3 0.0 39 59 124 147 95 153 0.78 # 18911 # 20440 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.438 8_2 - 186 HTH_40 PF14493.1 91 0.0011 12.8 0.6 1 1 2.1e-05 0.0037 11.2 0.1 7 32 152 177 147 183 0.89 # 435 # 992 # 1 # ID=8_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 5_2 - 202 HTH_38 PF13936.1 44 8.7e-08 25.4 1.0 1 1 5.2e-09 3e-07 23.6 0.0 15 44 168 197 160 197 0.93 # 709 # 1314 # -1 # ID=5_2;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.558 8_2 - 186 HTH_38 PF13936.1 44 5.3e-06 19.6 1.4 1 1 1.8e-07 1e-05 18.7 0.0 9 41 147 179 145 182 0.93 # 435 # 992 # 1 # ID=8_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 2_29 - 129 HTH_38 PF13936.1 44 0.00051 13.3 0.0 1 1 1.2e-05 0.0007 12.9 0.0 5 31 12 41 8 45 0.83 # 21426 # 21812 # 1 # ID=2_29;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.447 2_19 - 332 MobB PF03205.9 140 1.7e-05 18.2 1.8 1 1 4.5e-07 2.6e-05 17.6 0.3 2 39 160 196 159 201 0.83 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 4_15 - 876 MobB PF03205.9 140 0.0011 12.4 0.1 1 1 8.1e-05 0.0046 10.3 0.0 4 37 483 515 481 523 0.79 # 8001 # 10628 # -1 # ID=4_15;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.533 3_12 - 745 MobB PF03205.9 140 0.0017 11.8 0.0 1 1 6.5e-05 0.0037 10.7 0.0 7 34 192 219 188 225 0.89 # 13176 # 15410 # -1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.528 1_33 - 341 UvrD-helicase PF00580.16 315 1.7e-08 27.7 0.1 1 2 5.9e-06 0.001 12.0 0.1 16 69 4 49 2 78 0.83 # 28682 # 29704 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.541 1_33 - 341 UvrD-helicase PF00580.16 315 1.7e-08 27.7 0.1 2 2 2.6e-06 0.00045 13.2 0.0 242 294 115 170 96 174 0.86 # 28682 # 29704 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.541 2_31 - 123 ATP_bind_2 PF03668.10 284 0.00062 12.5 0.2 1 1 5.9e-06 0.001 11.8 0.1 47 91 60 104 47 109 0.88 # 22539 # 22907 # 1 # ID=2_31;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.480 1_54 - 153 Sigma54_DBD PF04552.8 160 0.00051 13.3 0.1 1 1 5.3e-06 0.00091 12.4 0.0 97 154 42 97 26 103 0.76 # 44835 # 45293 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.545 2_19 - 332 Myosin_head PF00063.16 689 0.00027 12.7 0.0 1 1 2.2e-06 0.00038 12.2 0.0 84 110 157 183 147 209 0.90 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 3_11 - 1757 AAA_19 PF13245.1 76 3.1e-07 23.8 2.0 1 1 1.7e-08 9.7e-07 22.2 0.5 7 76 981 1047 974 1047 0.74 # 7906 # 13176 # -1 # ID=3_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.601 2_19 - 332 AAA_19 PF13245.1 76 0.0011 12.4 0.1 1 1 4.2e-05 0.0024 11.3 0.1 5 48 153 191 149 224 0.78 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 2_26 - 1079 AAA_19 PF13245.1 76 0.004 10.6 3.7 1 2 0.00084 0.048 7.2 0.2 2 75 485 551 484 552 0.75 # 15675 # 18911 # -1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 2_26 - 1079 AAA_19 PF13245.1 76 0.004 10.6 3.7 2 2 0.041 2.3 1.7 0.0 17 32 706 721 705 731 0.82 # 15675 # 18911 # -1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 1_14 - 389 CbiA PF01656.18 195 1.7e-36 119.1 0.0 1 1 2.7e-38 2.3e-36 118.7 0.0 2 194 110 339 109 340 0.80 # 10453 # 11619 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 2_30 - 239 CbiA PF01656.18 195 6e-06 19.4 0.6 1 1 1e-05 0.00089 12.3 0.6 64 164 47 141 3 168 0.69 # 21821 # 22537 # 1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.428 1_10 - 228 MethyltransfD12 PF02086.10 260 0.00066 12.8 0.0 1 2 0.014 2.3 1.2 0.0 173 188 16 31 10 92 0.81 # 6732 # 7415 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_10 - 228 MethyltransfD12 PF02086.10 260 0.00066 12.8 0.0 2 2 4e-05 0.0069 9.5 0.0 20 46 163 189 148 197 0.78 # 6732 # 7415 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 5_2 - 202 Sigma70_r4_2 PF08281.7 54 2.1e-06 20.8 0.0 1 1 8.1e-08 6.9e-06 19.2 0.0 17 44 165 191 165 199 0.86 # 709 # 1314 # -1 # ID=5_2;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.558 4_27 - 229 Sigma70_r4_2 PF08281.7 54 0.00095 12.3 0.0 1 1 1.8e-05 0.0015 11.7 0.0 17 48 158 188 150 194 0.79 # 16544 # 17230 # -1 # ID=4_27;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.358 1_15 - 252 Rep_3 PF01051.16 222 5.7e-50 163.6 0.0 1 1 7.5e-52 6.4e-50 163.4 0.0 3 222 16 242 14 242 0.91 # 12207 # 12962 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.474 2_35 - 240 Rep_3 PF01051.16 222 1.2e-44 146.2 0.2 1 1 1.6e-46 1.4e-44 146.0 0.2 2 213 8 227 7 232 0.93 # 24889 # 25608 # -1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.451 1_53 - 124 rve PF00665.21 120 2e-13 44.2 0.0 1 1 4.4e-15 3.8e-13 43.3 0.0 53 119 2 67 1 68 0.96 # 44405 # 44776 # -1 # ID=1_53;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 9_1 - 207 rve PF00665.21 120 3.6e-13 43.4 0.1 1 2 0.023 2 2.2 0.0 78 102 33 55 10 60 0.83 # 3 # 623 # 1 # ID=9_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.541 9_1 - 207 rve PF00665.21 120 3.6e-13 43.4 0.1 2 2 8.8e-14 7.5e-12 39.1 0.0 9 119 81 188 76 189 0.89 # 3 # 623 # 1 # ID=9_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.541 1_32 - 522 AAA_23 PF13476.1 202 5.7e-12 40.0 0.0 1 1 6.4e-13 2.8e-11 37.8 0.0 1 53 6 58 6 115 0.85 # 27132 # 28697 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 2_19 - 332 AAA_23 PF13476.1 202 0.0008 13.4 0.1 1 1 3.8e-05 0.0016 12.4 0.1 19 39 158 178 149 184 0.85 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_50 - 358 AAA_23 PF13476.1 202 0.001 13.0 0.0 1 1 3.7e-05 0.0016 12.4 0.0 14 37 21 45 2 49 0.78 # 41330 # 42403 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.617 2_12 - 867 AAA_23 PF13476.1 202 0.0082 10.1 0.0 1 1 0.00019 0.0082 10.1 0.0 22 39 494 511 464 521 0.84 # 4273 # 6873 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 1_1 - 181 Methyltransf_26 PF13659.1 117 5.1e-12 39.6 0.0 1 1 1.1e-13 9.7e-12 38.7 0.0 2 111 52 144 51 150 0.89 # 469 # 1011 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.589 1_10 - 228 Methyltransf_26 PF13659.1 117 1.5e-11 38.1 0.0 1 2 4.1e-07 3.5e-05 17.5 0.0 57 114 7 71 2 74 0.69 # 6732 # 7415 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_10 - 228 Methyltransf_26 PF13659.1 117 1.5e-11 38.1 0.0 2 2 1.9e-07 1.7e-05 18.6 0.0 4 45 167 207 164 223 0.82 # 6732 # 7415 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 2_19 - 332 Zeta_toxin PF06414.7 201 2.6e-06 20.3 0.0 1 1 5.4e-08 4.6e-06 19.5 0.0 12 51 154 193 145 204 0.86 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 4_19 - 107 Zeta_toxin PF06414.7 201 0.002 10.9 0.1 1 1 3.4e-05 0.0029 10.4 0.1 14 39 70 95 59 102 0.80 # 11900 # 12220 # -1 # ID=4_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 2_26 - 1079 AAA_30 PF13604.1 196 1.2e-52 172.0 7.6 1 1 7.7e-54 4.4e-52 170.2 6.4 1 192 477 660 477 663 0.97 # 15675 # 18911 # -1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 3_11 - 1757 AAA_30 PF13604.1 196 8.3e-44 143.1 14.7 1 2 2.8e-05 0.0016 11.7 3.8 7 147 420 552 416 562 0.84 # 7906 # 13176 # -1 # ID=3_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.601 3_11 - 1757 AAA_30 PF13604.1 196 8.3e-44 143.1 14.7 2 2 2.7e-43 1.5e-41 135.7 1.6 1 186 968 1156 968 1160 0.94 # 7906 # 13176 # -1 # ID=3_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.601 2_19 - 332 AAA_30 PF13604.1 196 0.00026 14.3 0.1 1 2 7.1e-05 0.0041 10.4 0.1 11 51 151 190 145 197 0.80 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 2_19 - 332 AAA_30 PF13604.1 196 0.00026 14.3 0.1 2 2 0.035 2 1.6 0.0 121 178 204 258 191 272 0.77 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_32 - 522 SMC_N PF02463.14 220 4.3e-11 36.1 0.0 1 2 2.8e-11 2.4e-09 30.4 0.0 2 69 4 67 3 79 0.85 # 27132 # 28697 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 1_32 - 522 SMC_N PF02463.14 220 4.3e-11 36.1 0.0 2 2 0.0047 0.41 3.5 0.0 163 204 281 321 253 330 0.85 # 27132 # 28697 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 1_50 - 358 SMC_N PF02463.14 220 7.8e-08 25.4 0.2 1 1 1.7e-08 1.5e-06 21.2 0.2 24 209 27 203 16 211 0.66 # 41330 # 42403 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.617 1_22 - 142 HTH_Tnp_1 PF01527.15 76 8.3e-19 61.1 0.3 1 1 2.7e-20 1.5e-18 60.2 0.1 3 53 10 61 8 97 0.78 # 17373 # 17798 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.491 1_55 - 146 HTH_Tnp_1 PF01527.15 76 5.4e-09 29.6 0.1 1 1 1.5e-10 8.6e-09 29.0 0.1 24 75 68 125 62 125 0.86 # 45293 # 45730 # -1 # ID=1_55;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.537 9_1 - 207 HTH_Tnp_1 PF01527.15 76 0.00036 14.2 0.4 1 1 1.3e-05 0.00077 13.1 0.4 4 51 12 64 10 70 0.79 # 3 # 623 # 1 # ID=9_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.541 5_2 - 202 GerE PF00196.14 58 5.1e-05 16.3 0.0 1 1 5.1e-07 8.8e-05 15.5 0.0 11 35 166 190 165 201 0.88 # 709 # 1314 # -1 # ID=5_2;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.558 2_27 - 510 TraG-D_C PF12696.2 128 2.3e-21 69.7 0.0 1 1 4.4e-23 3.8e-21 69.0 0.0 1 127 350 471 350 472 0.80 # 18911 # 20440 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.438 3_12 - 745 TraG-D_C PF12696.2 128 1.2e-19 64.1 0.0 1 1 2.9e-21 2.5e-19 63.1 0.0 1 127 419 541 419 542 0.86 # 13176 # 15410 # -1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.528 9_1 - 207 DDE_3 PF13358.1 146 0.00086 12.8 0.0 1 1 1.6e-05 0.0028 11.1 0.0 32 90 88 147 65 152 0.87 # 3 # 623 # 1 # ID=9_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.541 1_50 - 358 TIGR03263 TIGR03263 180 0.0001 15.4 0.1 1 2 3.1e-06 0.00054 13.0 0.0 2 22 28 48 27 85 0.82 # 41330 # 42403 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.617 1_50 - 358 TIGR03263 TIGR03263 180 0.0001 15.4 0.1 2 2 0.036 6.2 -0.2 0.1 115 152 151 188 135 204 0.81 # 41330 # 42403 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.617 1_14 - 389 MipZ PF09140.6 261 7.4e-06 18.8 0.4 1 2 3.5e-06 0.00061 12.6 0.0 2 47 108 153 107 157 0.87 # 10453 # 11619 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_14 - 389 MipZ PF09140.6 261 7.4e-06 18.8 0.4 2 2 0.0011 0.19 4.4 0.0 88 134 224 270 197 292 0.84 # 10453 # 11619 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_10 - 228 UPF0020 PF01170.13 180 2.2e-05 17.7 0.0 1 2 0.00029 0.05 6.8 0.0 103 119 17 33 4 88 0.73 # 6732 # 7415 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_10 - 228 UPF0020 PF01170.13 180 2.2e-05 17.7 0.0 2 2 6.2e-05 0.011 9.0 0.0 28 54 163 189 158 221 0.67 # 6732 # 7415 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_1 - 181 Methyltransf_25 PF13649.1 101 0.00053 14.0 0.0 1 1 4.4e-06 0.00076 13.5 0.0 1 93 54 135 54 142 0.77 # 469 # 1011 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.589 5_11 - 421 DDE_Tnp_1 PF01609.16 213 1.4e-34 113.2 0.2 1 1 1.7e-36 2.9e-34 112.1 0.0 6 213 128 362 123 362 0.96 # 10198 # 11460 # -1 # ID=5_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.340 4_21 - 476 DivIC PF04977.10 80 0.0015 11.7 4.6 1 1 1.8e-05 0.0031 10.7 4.6 17 66 76 124 72 125 0.92 # 12781 # 14208 # -1 # ID=4_21;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.571 1_32 - 522 AAA_21 PF13304.1 303 1.1e-13 45.5 0.1 1 2 1.4e-06 0.00012 15.7 0.0 2 24 27 49 27 76 0.83 # 27132 # 28697 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 1_32 - 522 AAA_21 PF13304.1 303 1.1e-13 45.5 0.1 2 2 4.1e-10 3.5e-08 27.3 0.2 261 301 280 318 243 320 0.90 # 27132 # 28697 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 1_50 - 358 AAA_21 PF13304.1 303 1.5e-10 35.1 0.0 1 2 7.1e-08 6.1e-06 20.0 0.0 1 59 29 96 29 112 0.69 # 41330 # 42403 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.617 1_50 - 358 AAA_21 PF13304.1 303 1.5e-10 35.1 0.0 2 2 8.9e-06 0.00077 13.1 0.0 234 298 129 191 118 197 0.88 # 41330 # 42403 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.617 4_16 - 74 zf-dskA_traR PF01258.12 36 2.9e-15 49.4 3.4 1 1 2.5e-17 4.3e-15 48.9 3.4 5 36 35 67 30 67 0.91 # 10788 # 11009 # -1 # ID=4_16;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.432 2_26 - 1079 AAA PF00004.24 132 6.2e-06 20.1 1.0 1 1 2.5e-07 2.1e-05 18.4 0.1 4 111 500 600 497 617 0.74 # 15675 # 18911 # -1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 1_50 - 358 AAA PF00004.24 132 0.0007 13.5 0.0 1 1 1.6e-05 0.0014 12.5 0.0 1 20 30 49 30 75 0.93 # 41330 # 42403 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.617 2_19 - 332 Parvo_NS1 PF01057.12 272 0.0015 11.1 0.0 1 1 1.4e-05 0.0025 10.4 0.0 104 138 148 182 140 188 0.90 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 6_5 - 653 KorB PF08535.5 93 0.00012 15.9 0.0 1 1 2.2e-06 0.00038 14.3 0.0 2 43 152 193 151 204 0.93 # 2148 # 4106 # -1 # ID=6_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.585 4_25 - 121 CTP_transf_2 PF01467.21 157 0.0014 12.3 0.0 1 1 9.7e-06 0.0017 12.1 0.0 32 64 7 38 2 93 0.70 # 15827 # 16189 # -1 # ID=4_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.490 2_26 - 1079 Herpes_Helicase PF02689.9 819 3.8e-05 15.2 0.0 1 2 0.0014 0.24 2.7 0.0 173 208 539 574 515 584 0.81 # 15675 # 18911 # -1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 2_26 - 1079 Herpes_Helicase PF02689.9 819 3.8e-05 15.2 0.0 2 2 9.3e-06 0.0016 9.9 0.0 739 782 850 894 831 914 0.80 # 15675 # 18911 # -1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 1_50 - 358 TOBE_2 PF08402.5 75 5.4e-12 39.3 0.1 1 1 7.2e-14 1.2e-11 38.1 0.1 1 75 270 342 270 342 0.94 # 41330 # 42403 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.617 1_10 - 228 N6_N4_Mtase PF01555.13 231 1.1e-36 120.1 0.0 1 2 1.2e-15 2e-13 44.0 0.0 1 114 21 124 21 137 0.89 # 6732 # 7415 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_10 - 228 N6_N4_Mtase PF01555.13 231 1.1e-36 120.1 0.0 2 2 5.4e-25 9.3e-23 74.5 0.0 169 228 141 200 126 203 0.90 # 6732 # 7415 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_53 - 124 rve_2 PF13333.1 52 3.3e-08 27.2 0.0 1 1 3.2e-10 5.6e-08 26.5 0.0 1 43 58 104 58 112 0.83 # 44405 # 44776 # -1 # ID=1_53;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 2_26 - 1079 Torsin PF06309.6 127 3.8e-05 17.3 0.0 1 1 6.1e-07 0.00011 15.8 0.0 19 85 460 526 452 537 0.83 # 15675 # 18911 # -1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 1_14 - 389 MerR_1 PF13411.1 69 0.00062 13.2 0.0 1 1 1.1e-05 0.0018 11.7 0.0 2 44 41 88 40 105 0.75 # 10453 # 11619 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 2_19 - 332 cobW PF02492.14 178 3.8e-06 20.1 0.0 1 1 8.2e-08 7e-06 19.2 0.0 3 45 161 202 159 257 0.77 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_33 - 341 cobW PF02492.14 178 0.0014 11.8 0.0 1 1 2.8e-05 0.0024 11.0 0.0 4 30 5 31 3 53 0.72 # 28682 # 29704 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.541 1_50 - 358 AAA_16 PF13191.1 185 3.2e-07 24.2 0.1 1 1 2.3e-08 7.8e-07 22.9 0.1 14 48 18 50 15 84 0.78 # 41330 # 42403 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.617 2_19 - 332 AAA_16 PF13191.1 185 1.1e-06 22.3 0.0 1 1 8.6e-08 2.9e-06 21.0 0.0 24 61 158 195 149 274 0.82 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 3_12 - 745 AAA_16 PF13191.1 185 8e-05 16.3 0.0 1 1 1.1e-05 0.00037 14.2 0.0 21 57 182 219 179 264 0.81 # 13176 # 15410 # -1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.528 1_29 - 1275 AAA_16 PF13191.1 185 0.00028 14.6 0.0 1 1 2.4e-05 0.00083 13.0 0.0 14 64 46 96 38 111 0.76 # 22239 # 26063 # -1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.414 4_19 - 107 AAA_16 PF13191.1 185 0.00035 14.2 0.1 1 1 2.2e-05 0.00077 13.1 0.1 22 51 70 99 62 104 0.90 # 11900 # 12220 # -1 # ID=4_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 2_19 - 332 AAA_22 PF13401.1 131 4.7e-07 23.7 0.0 1 1 3.7e-08 1e-06 22.6 0.0 3 54 157 202 153 241 0.74 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_50 - 358 AAA_22 PF13401.1 131 3.4e-06 20.9 0.0 1 1 2.1e-07 6.1e-06 20.1 0.0 3 57 26 81 24 189 0.84 # 41330 # 42403 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.617 1_33 - 341 AAA_22 PF13401.1 131 5.7e-05 16.9 0.0 1 1 1.4e-05 0.00041 14.2 0.0 8 111 5 155 4 167 0.75 # 28682 # 29704 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.541 2_12 - 867 AAA_22 PF13401.1 131 0.0001 16.1 0.0 1 1 0.00015 0.0043 10.9 0.0 5 28 492 515 489 549 0.85 # 4273 # 6873 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 2_26 - 1079 AAA_22 PF13401.1 131 0.0011 12.8 0.2 1 1 0.00045 0.013 9.3 0.2 4 125 494 598 490 603 0.81 # 15675 # 18911 # -1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 4_19 - 107 AAA_22 PF13401.1 131 0.0017 12.2 0.0 1 1 9.8e-05 0.0028 11.5 0.0 3 27 71 95 66 103 0.86 # 11900 # 12220 # -1 # ID=4_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 1_14 - 389 HTH_AraC PF00165.18 42 0.0015 12.1 0.0 1 1 1.8e-05 0.0031 11.1 0.0 4 26 35 57 33 62 0.81 # 10453 # 11619 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_32 - 522 AAA_29 PF13555.1 62 1.6e-07 24.5 0.0 1 1 5.6e-09 3.2e-07 23.5 0.0 2 49 5 50 4 57 0.84 # 27132 # 28697 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 1_50 - 358 AAA_29 PF13555.1 62 2.1e-05 17.7 0.0 1 1 7.6e-07 4.4e-05 16.7 0.0 17 40 22 44 17 48 0.85 # 41330 # 42403 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.617 2_19 - 332 AAA_29 PF13555.1 62 0.0017 11.6 0.0 1 1 7e-05 0.004 10.4 0.0 19 43 157 178 145 188 0.75 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_22 - 142 LZ_Tnp_IS481 PF13011.1 85 0.00098 13.2 0.1 1 1 1.5e-05 0.0025 11.9 0.0 25 53 30 58 19 72 0.87 # 17373 # 17798 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.491 3_15 - 940 Orn_Arg_deC_N PF02784.11 251 0.0021 10.9 0.1 1 1 1.2e-05 0.0021 10.9 0.1 171 212 610 650 598 682 0.79 # 16942 # 19761 # -1 # ID=3_15;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.506 8_2 - 186 HTH_Tnp_IS630 PF01710.11 120 0.00016 15.0 0.0 1 1 1.9e-06 0.00033 14.0 0.0 8 44 148 184 145 185 0.90 # 435 # 992 # 1 # ID=8_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 1_50 - 358 AAA_28 PF13521.1 163 4.7e-05 17.1 0.0 1 1 1e-06 8.6e-05 16.2 0.0 2 22 30 50 29 112 0.79 # 41330 # 42403 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.617 3_12 - 745 AAA_28 PF13521.1 163 0.00072 13.2 0.0 1 1 2.2e-05 0.0019 11.9 0.0 2 37 188 228 187 252 0.78 # 13176 # 15410 # -1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.528 4_26 - 76 IF2_assoc PF08364.6 41 0.0038 11.0 2.8 1 2 0.043 7.4 0.4 0.3 19 29 6 16 3 16 0.78 # 16223 # 16450 # -1 # ID=4_26;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.430 4_26 - 76 IF2_assoc PF08364.6 41 0.0038 11.0 2.8 2 2 2.7e-05 0.0046 10.7 0.1 16 32 28 44 27 51 0.85 # 16223 # 16450 # -1 # ID=4_26;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.430 2_13 - 238 Mnd1 PF03962.10 188 0.0035 10.7 9.9 1 2 0.00013 0.022 8.0 0.5 105 139 34 64 20 86 0.71 # 6891 # 7604 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.508 2_13 - 238 Mnd1 PF03962.10 188 0.0035 10.7 9.9 2 2 0.00034 0.059 6.7 3.2 66 126 155 217 110 222 0.84 # 6891 # 7604 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.508 9_1 - 207 HTH_32 PF13565.1 77 1e-06 23.2 0.1 1 1 2.7e-08 4.6e-06 21.1 0.0 25 76 10 56 2 57 0.83 # 3 # 623 # 1 # ID=9_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.541 1_50 - 358 Rad17 PF03215.10 519 3.8e-06 19.4 0.0 1 1 3.1e-08 5.3e-06 19.0 0.0 32 96 14 79 8 102 0.79 # 41330 # 42403 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.617 5_11 - 421 DDE_Tnp_1_4 PF13701.1 449 5.5e-27 87.6 3.5 1 2 0.0052 0.89 1.2 0.0 11 42 5 36 3 62 0.72 # 10198 # 11460 # -1 # ID=5_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.340 5_11 - 421 DDE_Tnp_1_4 PF13701.1 449 5.5e-27 87.6 3.5 2 2 1.5e-28 2.5e-26 85.4 2.2 137 438 122 418 41 420 0.82 # 10198 # 11460 # -1 # ID=5_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.340 1_22 - 142 HTH_23 PF13384.1 50 4.7e-09 29.4 0.0 1 1 3e-10 8.7e-09 28.6 0.0 5 45 17 58 13 64 0.89 # 17373 # 17798 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.491 5_2 - 202 HTH_23 PF13384.1 50 2.1e-07 24.2 0.2 1 1 7.3e-09 2.1e-07 24.2 0.2 10 42 166 198 160 201 0.92 # 709 # 1314 # -1 # ID=5_2;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.558 9_1 - 207 HTH_23 PF13384.1 50 1.1e-05 18.8 1.1 1 2 0.079 2.3 1.8 0.0 7 27 17 41 13 42 0.69 # 3 # 623 # 1 # ID=9_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.541 9_1 - 207 HTH_23 PF13384.1 50 1.1e-05 18.8 1.1 2 2 9.5e-06 0.00027 14.3 0.1 28 42 47 61 46 69 0.87 # 3 # 623 # 1 # ID=9_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.541 6_5 - 653 HTH_23 PF13384.1 50 1.8e-05 18.0 0.0 1 1 3.4e-06 9.8e-05 15.7 0.0 13 40 149 176 143 180 0.91 # 2148 # 4106 # -1 # ID=6_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.585 8_2 - 186 HTH_23 PF13384.1 50 7.6e-05 16.0 0.3 1 1 2.6e-06 7.6e-05 16.0 0.3 5 39 146 180 142 184 0.87 # 435 # 992 # 1 # ID=8_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 1_55 - 146 HTH_23 PF13384.1 50 0.0006 13.2 0.0 1 1 4.7e-05 0.0013 12.1 0.0 22 43 72 93 66 113 0.86 # 45293 # 45730 # -1 # ID=1_55;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.537 8_2 - 186 HTH_7 PF02796.10 45 4e-13 42.7 1.1 1 1 1e-14 8.8e-13 41.6 0.1 1 44 141 181 141 182 0.97 # 435 # 992 # 1 # ID=8_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 5_2 - 202 HTH_7 PF02796.10 45 2.7e-05 17.7 0.0 1 1 8.7e-07 7.5e-05 16.3 0.0 13 38 165 190 156 190 0.93 # 709 # 1314 # -1 # ID=5_2;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.558 1_50 - 358 NB-ARC PF00931.17 287 0.0013 11.3 0.0 1 1 2e-05 0.0034 9.9 0.0 12 37 20 45 15 49 0.82 # 41330 # 42403 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.617 2_29 - 129 Ribosomal_S20p PF01649.13 84 0.00049 14.2 0.1 1 1 4.9e-06 0.00084 13.4 0.1 6 47 56 97 53 115 0.77 # 21426 # 21812 # 1 # ID=2_29;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.447 1_50 - 358 Mg_chelatase PF01078.16 207 0.00017 14.5 0.0 1 1 1.8e-06 0.0003 13.6 0.0 14 84 19 89 6 102 0.79 # 41330 # 42403 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.617 5_2 - 202 HTH_29 PF13551.1 112 7.7e-05 16.5 0.4 1 2 0.025 1.4 2.8 0.0 52 88 44 87 32 101 0.60 # 709 # 1314 # -1 # ID=5_2;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.558 5_2 - 202 HTH_29 PF13551.1 112 7.7e-05 16.5 0.4 2 2 5.7e-05 0.0033 11.3 0.2 4 36 166 197 165 200 0.89 # 709 # 1314 # -1 # ID=5_2;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.558 1_22 - 142 HTH_29 PF13551.1 112 8.7e-05 16.4 0.1 1 1 3.8e-06 0.00022 15.1 0.1 7 41 25 59 19 108 0.83 # 17373 # 17798 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.491 8_2 - 186 HTH_29 PF13551.1 112 0.00018 15.3 0.6 1 2 0.074 4.2 1.3 0.2 24 46 114 136 88 153 0.67 # 435 # 992 # 1 # ID=8_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 8_2 - 186 HTH_29 PF13551.1 112 0.00018 15.3 0.6 2 2 3.1e-05 0.0018 12.2 0.0 4 35 151 181 148 184 0.90 # 435 # 992 # 1 # ID=8_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 1_1 - 181 Met_10 PF02475.11 200 0.0013 12.0 0.0 1 1 1.1e-05 0.0018 11.5 0.0 99 188 48 131 38 140 0.81 # 469 # 1011 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.589 2_40 - 112 Ribosomal_S6 PF01250.12 92 0.00079 13.0 0.1 1 2 0.00032 0.056 7.1 0.0 38 88 19 70 10 74 0.81 # 30127 # 30462 # 1 # ID=2_40;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.494 2_40 - 112 Ribosomal_S6 PF01250.12 92 0.00079 13.0 0.1 2 2 0.0022 0.38 4.4 0.0 11 40 81 110 74 111 0.91 # 30127 # 30462 # 1 # ID=2_40;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.494 1_24 - 538 DDE_Tnp_IS66 PF03050.9 271 7.5e-99 323.9 0.0 1 1 8.7e-101 7.5e-99 323.9 0.0 1 271 196 487 196 487 0.98 # 18176 # 19789 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.546 9_1 - 207 DDE_Tnp_IS66 PF03050.9 271 3e-12 39.9 0.3 1 1 4.2e-14 3.6e-12 39.7 0.3 5 132 16 150 12 179 0.87 # 3 # 623 # 1 # ID=9_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.541 1_1 - 181 Methyltransf_31 PF13847.1 152 0.0018 11.5 0.0 1 1 1.4e-05 0.0023 11.2 0.0 5 102 52 140 48 149 0.85 # 469 # 1011 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.589 2_19 - 332 Arch_ATPase PF01637.13 234 1.6e-05 18.4 0.0 1 1 3.2e-07 2.8e-05 17.6 0.0 15 68 155 205 149 226 0.87 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_50 - 358 Arch_ATPase PF01637.13 234 0.0004 13.8 0.0 1 1 7e-06 0.0006 13.2 0.0 8 39 17 46 11 62 0.80 # 41330 # 42403 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.617 2_26 - 1079 PhoH PF02562.11 205 8.5e-09 28.6 5.3 1 2 9.6e-07 8.3e-05 15.5 0.4 5 39 478 514 475 536 0.80 # 15675 # 18911 # -1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 2_26 - 1079 PhoH PF02562.11 205 8.5e-09 28.6 5.3 2 2 3.3e-06 0.00028 13.8 0.1 120 162 562 605 553 634 0.83 # 15675 # 18911 # -1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 2_19 - 332 PhoH PF02562.11 205 0.00053 12.9 0.0 1 1 1.1e-05 0.00096 12.1 0.0 14 45 153 184 143 210 0.79 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_50 - 358 AAA_5 PF07728.9 139 6.8e-05 16.3 0.2 1 1 9.8e-07 0.00017 15.0 0.0 2 22 30 50 29 69 0.87 # 41330 # 42403 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.617 2_37 - 264 SprT-like PF10263.4 157 2.4e-36 118.4 0.0 1 1 1.9e-38 3.3e-36 118.0 0.0 1 150 12 236 12 262 0.92 # 26524 # 27315 # -1 # ID=2_37;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 2_19 - 332 ResIII PF04851.10 184 1.1e-05 19.1 0.0 1 1 9.6e-08 1.7e-05 18.4 0.0 22 61 148 196 104 202 0.81 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 3_12 - 745 TrwB_AAD_bind PF10412.4 386 1.9e-148 487.8 0.0 1 1 8.2e-150 2.4e-148 487.5 0.0 2 386 172 561 171 561 0.99 # 13176 # 15410 # -1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.528 2_27 - 510 TrwB_AAD_bind PF10412.4 386 1.8e-118 389.1 0.0 1 1 7.4e-120 2.1e-118 388.9 0.0 1 385 112 490 112 491 0.95 # 18911 # 20440 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.438 4_15 - 876 TrwB_AAD_bind PF10412.4 386 1.5e-06 20.7 0.3 1 1 1.4e-07 4.1e-06 19.3 0.0 15 53 479 517 470 547 0.80 # 8001 # 10628 # -1 # ID=4_15;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.533 2_12 - 867 TrwB_AAD_bind PF10412.4 386 1.6e-06 20.6 1.6 1 2 3e-06 8.5e-05 14.9 0.0 16 51 492 527 484 536 0.92 # 4273 # 6873 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 2_12 - 867 TrwB_AAD_bind PF10412.4 386 1.6e-06 20.6 1.6 2 2 0.0084 0.24 3.5 0.0 102 168 741 806 720 812 0.79 # 4273 # 6873 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 2_19 - 332 TrwB_AAD_bind PF10412.4 386 2.4e-05 16.8 0.1 1 1 1.3e-06 3.6e-05 16.1 0.1 14 49 157 191 150 202 0.81 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 4_19 - 107 TrwB_AAD_bind PF10412.4 386 0.00026 13.3 0.0 1 1 2.1e-05 0.0006 12.1 0.0 5 42 62 99 58 103 0.88 # 11900 # 12220 # -1 # ID=4_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 1_14 - 389 TIGR01968 TIGR01968 261 7.6e-08 25.3 0.1 1 2 2.6e-06 0.00045 13.0 0.0 3 37 108 142 106 145 0.93 # 10453 # 11619 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_14 - 389 TIGR01968 TIGR01968 261 7.6e-08 25.3 0.1 2 2 1.5e-05 0.0027 10.4 0.0 104 145 227 268 215 340 0.81 # 10453 # 11619 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 2_19 - 332 AAA_18 PF13238.1 129 8.1e-06 19.9 0.0 1 1 2.9e-07 1.7e-05 18.8 0.0 1 29 161 194 161 213 0.77 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_50 - 358 AAA_18 PF13238.1 129 4.7e-05 17.4 0.0 1 1 2.7e-06 0.00016 15.7 0.0 1 22 30 51 30 139 0.77 # 41330 # 42403 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.617 2_27 - 510 AAA_18 PF13238.1 129 0.00022 15.2 0.0 1 1 7.8e-06 0.00045 14.2 0.0 3 21 131 149 130 238 0.78 # 18911 # 20440 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.438 1_32 - 522 TIGR00611 TIGR00611 365 1.1e-08 27.9 2.7 1 3 2.2e-10 3.8e-08 26.2 0.0 3 56 4 57 2 79 0.92 # 27132 # 28697 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 1_32 - 522 TIGR00611 TIGR00611 365 1.1e-08 27.9 2.7 2 3 0.04 6.9 -1.0 0.1 322 345 297 319 270 330 0.72 # 27132 # 28697 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 1_32 - 522 TIGR00611 TIGR00611 365 1.1e-08 27.9 2.7 3 3 0.02 3.5 -0.0 0.2 150 191 453 493 402 508 0.46 # 27132 # 28697 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 2_38 - 422 IMS_HHH PF11798.3 32 8e-07 22.6 0.0 1 1 1.4e-08 2.3e-06 21.2 0.0 4 32 171 199 168 199 0.85 # 27466 # 28731 # -1 # ID=2_38;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.538 2_19 - 332 GvpD PF07088.6 484 4.4e-06 18.9 0.0 1 1 3.9e-08 6.7e-06 18.3 0.0 10 89 158 241 150 262 0.76 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_10 - 228 Methyltransf_15 PF09445.5 164 0.0014 11.9 0.0 1 2 0.045 7.8 -0.3 0.0 53 79 4 29 2 32 0.90 # 6732 # 7415 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_10 - 228 Methyltransf_15 PF09445.5 164 0.0014 11.9 0.0 2 2 4.2e-05 0.0073 9.5 0.0 3 31 166 194 164 209 0.86 # 6732 # 7415 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_1 - 181 Methyltransf_12 PF08242.7 99 0.00032 14.9 0.0 1 1 2.6e-06 0.00045 14.4 0.0 1 97 55 142 55 144 0.85 # 469 # 1011 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.589 1_50 - 358 DUF258 PF03193.11 161 3.3e-07 23.3 0.0 1 1 7.1e-09 6.1e-07 22.4 0.0 26 77 17 69 3 83 0.79 # 41330 # 42403 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.617 2_19 - 332 DUF258 PF03193.11 161 0.00019 14.3 0.0 1 1 4.1e-06 0.00035 13.5 0.0 29 61 151 184 129 224 0.81 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 2_27 - 510 DUF87 PF01935.12 229 1.9e-07 24.8 0.0 1 1 6.8e-09 2.9e-07 24.2 0.0 10 68 116 170 109 262 0.85 # 18911 # 20440 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.438 4_15 - 876 DUF87 PF01935.12 229 2.7e-07 24.3 0.0 1 1 1.8e-08 7.8e-07 22.8 0.0 26 222 482 669 468 676 0.76 # 8001 # 10628 # -1 # ID=4_15;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.533 2_19 - 332 DUF87 PF01935.12 229 4.5e-06 20.3 0.0 1 1 1.9e-07 8.3e-06 19.4 0.0 9 61 144 195 138 196 0.78 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 4_19 - 107 DUF87 PF01935.12 229 0.00077 13.0 0.0 1 1 2.9e-05 0.0012 12.3 0.0 25 50 74 99 72 103 0.91 # 11900 # 12220 # -1 # ID=4_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 5_2 - 202 HTH_28 PF13518.1 52 4.6e-08 26.7 0.4 1 1 2.4e-09 1.1e-07 25.5 0.4 4 38 165 199 165 201 0.92 # 709 # 1314 # -1 # ID=5_2;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.558 1_22 - 142 HTH_28 PF13518.1 52 1.1e-05 19.1 0.1 1 1 4.6e-07 2e-05 18.2 0.1 1 41 18 59 18 63 0.92 # 17373 # 17798 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.491 9_1 - 207 HTH_28 PF13518.1 52 8.8e-05 16.2 1.2 1 1 8.1e-06 0.00035 14.3 1.2 22 36 46 60 18 61 0.75 # 3 # 623 # 1 # ID=9_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.541 8_2 - 186 HTH_28 PF13518.1 52 0.00023 14.8 0.0 1 1 1.7e-05 0.00073 13.2 0.0 8 33 154 179 148 184 0.82 # 435 # 992 # 1 # ID=8_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 5_2 - 202 HTH_24 PF13412.1 48 4.1e-05 16.6 0.0 1 1 1e-06 8.9e-05 15.6 0.0 16 40 172 196 168 196 0.89 # 709 # 1314 # -1 # ID=5_2;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.558 1_43 - 251 HTH_24 PF13412.1 48 0.001 12.1 0.0 1 1 2.8e-05 0.0024 11.0 0.0 7 42 14 49 10 51 0.90 # 34671 # 35423 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.494 2_19 - 332 Sigma54_activ_2 PF14532.1 138 4e-06 20.6 0.0 1 1 5e-08 8.7e-06 19.5 0.0 14 65 151 202 145 212 0.92 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_1 - 181 TIGR03533 TIGR03533 284 3.6e-05 16.6 0.0 1 1 3.3e-07 5.7e-05 15.9 0.0 116 209 45 132 37 139 0.87 # 469 # 1011 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.589 1_1 - 181 TIGR03534 TIGR03534 253 6.9e-08 25.6 0.0 1 1 4.6e-10 8e-08 25.4 0.0 81 173 45 129 11 140 0.86 # 469 # 1011 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.589 2_31 - 123 TIGR00344 TIGR00344 847 0.0021 9.6 1.4 1 1 1.4e-05 0.0024 9.4 1.4 695 759 21 84 16 98 0.80 # 22539 # 22907 # 1 # ID=2_31;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.480 5_2 - 202 HTH_10 PF04967.7 53 0.00077 12.8 0.0 1 1 1.3e-05 0.0022 11.3 0.0 27 46 177 196 173 199 0.86 # 709 # 1314 # -1 # ID=5_2;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.558 2_19 - 332 MMR_HSR1 PF01926.18 116 0.00074 13.2 0.0 1 1 1.4e-05 0.0012 12.5 0.0 2 41 161 205 160 310 0.84 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_50 - 358 MMR_HSR1 PF01926.18 116 0.0008 13.1 0.0 1 1 1.7e-05 0.0015 12.2 0.0 2 21 30 49 29 84 0.82 # 41330 # 42403 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.617 2_19 - 332 DEAD PF00270.24 169 5.1e-06 19.7 0.0 1 1 5.7e-08 9.7e-06 18.8 0.0 13 70 157 211 144 242 0.78 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_50 - 358 Miro PF08477.8 119 0.0002 15.5 0.0 1 1 2.9e-06 0.0005 14.3 0.0 2 30 30 61 30 93 0.76 # 41330 # 42403 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.617 1_14 - 389 HTH_31 PF13560.1 64 0.00022 15.1 0.4 1 1 3.8e-06 0.00065 13.6 0.2 12 45 37 69 31 73 0.87 # 10453 # 11619 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 2_19 - 332 DUF2075 PF09848.4 352 0.00016 14.4 0.0 1 1 1.3e-06 0.00022 13.9 0.0 1 32 158 187 158 216 0.76 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 2_26 - 1079 UvrD_C_2 PF13538.1 104 4.1e-16 52.7 0.1 1 1 3.1e-17 1.8e-15 50.7 0.1 2 102 797 896 796 898 0.76 # 15675 # 18911 # -1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 3_11 - 1757 UvrD_C_2 PF13538.1 104 2.7e-07 24.4 0.7 1 2 0.037 2.1 2.2 0.0 6 44 1227 1265 1223 1295 0.74 # 7906 # 13176 # -1 # ID=3_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.601 3_11 - 1757 UvrD_C_2 PF13538.1 104 2.7e-07 24.4 0.7 2 2 1.6e-07 9e-06 19.5 0.2 3 102 1341 1444 1339 1446 0.77 # 7906 # 13176 # -1 # ID=3_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.601 1_33 - 341 UvrD_C_2 PF13538.1 104 0.00013 15.8 0.0 1 1 4.6e-06 0.00026 14.8 0.0 37 103 247 329 224 330 0.65 # 28682 # 29704 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.541 1_1 - 181 TIGR00755 TIGR00755 256 4.1e-09 29.4 0.0 1 1 3.2e-11 5.5e-09 29.0 0.0 8 105 29 123 25 132 0.90 # 469 # 1011 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.589 3_3 - 87 Rad60-SLD PF11976.3 72 0.00018 14.8 0.1 1 1 1.5e-06 0.00026 14.3 0.1 12 39 41 68 33 77 0.83 # 3128 # 3388 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.418 2_19 - 332 T2SE PF00437.15 272 4.8e-52 170.1 0.1 1 1 9.7e-54 5.6e-52 169.9 0.1 3 271 10 311 8 312 0.94 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 4_19 - 107 T2SE PF00437.15 272 0.0013 11.3 0.0 1 1 2.4e-05 0.0014 11.2 0.0 107 154 54 98 24 103 0.79 # 11900 # 12220 # -1 # ID=4_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 2_27 - 510 T2SE PF00437.15 272 0.0015 11.1 0.1 1 1 4.6e-05 0.0027 10.3 0.1 130 149 128 147 103 160 0.84 # 18911 # 20440 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.438 2_19 - 332 NACHT PF05729.7 166 0.00015 15.1 0.0 1 1 3.8e-06 0.00033 14.0 0.0 1 27 159 185 159 188 0.90 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_50 - 358 NACHT PF05729.7 166 0.00036 13.9 0.1 1 1 8.6e-06 0.00074 12.9 0.1 3 21 30 48 28 50 0.89 # 41330 # 42403 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.617 2_19 - 332 UPF0079 PF02367.12 123 1e-05 18.8 0.0 1 1 1.2e-07 2.1e-05 17.8 0.0 9 45 152 188 145 193 0.85 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_50 - 358 AAA_17 PF13207.1 121 1.2e-06 23.1 0.0 1 1 6.5e-08 2.8e-06 21.9 0.0 2 60 30 118 29 182 0.54 # 41330 # 42403 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.617 2_19 - 332 AAA_17 PF13207.1 121 0.00065 14.2 0.1 1 1 3.8e-05 0.0016 12.9 0.1 2 40 161 195 160 229 0.75 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 2_27 - 510 AAA_17 PF13207.1 121 0.00095 13.7 0.1 1 1 9e-05 0.0039 11.7 0.0 4 42 131 191 129 260 0.58 # 18911 # 20440 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.438 2_12 - 867 AAA_17 PF13207.1 121 0.0014 13.1 4.6 1 1 0.0003 0.013 10.0 0.0 3 21 495 513 494 565 0.80 # 4273 # 6873 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 2_19 - 332 AAA_7 PF12775.2 272 0.00017 14.4 0.0 1 1 2.3e-06 0.0004 13.2 0.0 25 64 150 189 139 209 0.86 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_50 - 358 TIGR02211 TIGR02211 221 1.1e-43 142.6 0.0 1 1 7.9e-46 1.4e-43 142.3 0.0 3 218 3 209 1 212 0.91 # 41330 # 42403 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.617 2_19 - 332 TIGR03346 TIGR03346 853 0.00025 12.8 0.0 1 1 2e-06 0.00034 12.3 0.0 598 641 161 204 149 238 0.89 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_50 - 358 AAA_25 PF13481.1 194 3.6e-05 16.9 0.3 1 2 8.3e-07 0.00014 14.9 0.0 30 54 24 48 11 75 0.83 # 41330 # 42403 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.617 1_50 - 358 AAA_25 PF13481.1 194 3.6e-05 16.9 0.3 2 2 0.066 11 -1.0 0.2 163 183 190 210 134 217 0.56 # 41330 # 42403 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.617 2_26 - 1079 Viral_helicase1 PF01443.13 234 1.7e-14 47.6 5.7 1 2 7.9e-08 4.5e-06 20.0 0.0 3 104 499 605 497 640 0.73 # 15675 # 18911 # -1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 2_26 - 1079 Viral_helicase1 PF01443.13 234 1.7e-14 47.6 5.7 2 2 9.1e-11 5.2e-09 29.6 0.5 157 234 818 899 774 899 0.74 # 15675 # 18911 # -1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 1_33 - 341 Viral_helicase1 PF01443.13 234 1.1e-11 38.3 0.1 1 2 5.8e-07 3.3e-05 17.1 0.0 2 30 5 38 4 59 0.76 # 28682 # 29704 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.541 1_33 - 341 Viral_helicase1 PF01443.13 234 1.1e-11 38.3 0.1 2 2 2.2e-07 1.2e-05 18.5 0.1 63 233 133 330 122 331 0.67 # 28682 # 29704 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.541 3_11 - 1757 Viral_helicase1 PF01443.13 234 0.00073 12.7 0.0 1 2 0.00052 0.03 7.5 0.0 1 76 988 1077 988 1192 0.64 # 7906 # 13176 # -1 # ID=3_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.601 3_11 - 1757 Viral_helicase1 PF01443.13 234 0.00073 12.7 0.0 2 2 0.02 1.1 2.3 0.0 171 234 1387 1447 1342 1447 0.63 # 7906 # 13176 # -1 # ID=3_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.601 1_32 - 522 AAA_15 PF13175.1 415 5.8e-17 55.4 0.1 1 2 3.4e-09 2.9e-07 23.5 0.0 2 45 5 47 4 63 0.90 # 27132 # 28697 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 1_32 - 522 AAA_15 PF13175.1 415 5.8e-17 55.4 0.1 2 2 3.3e-11 2.8e-09 30.1 0.1 332 414 235 318 183 319 0.74 # 27132 # 28697 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 1_50 - 358 AAA_15 PF13175.1 415 1.5e-06 21.1 0.0 1 2 0.00086 0.074 5.7 0.0 19 42 23 47 5 103 0.80 # 41330 # 42403 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.617 1_50 - 358 AAA_15 PF13175.1 415 1.5e-06 21.1 0.0 2 2 3.4e-06 0.00029 13.6 0.0 372 411 152 191 143 193 0.93 # 41330 # 42403 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.617 4_19 - 107 Pox_A32 PF04665.7 241 0.00013 14.9 0.0 1 2 0.045 2.6 0.9 0.0 2 29 41 67 40 71 0.77 # 11900 # 12220 # -1 # ID=4_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 4_19 - 107 Pox_A32 PF04665.7 241 0.00013 14.9 0.0 2 2 8.4e-06 0.00048 13.1 0.0 7 42 66 101 60 104 0.89 # 11900 # 12220 # -1 # ID=4_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 2_19 - 332 Pox_A32 PF04665.7 241 0.00017 14.6 0.0 1 1 5.1e-06 0.00029 13.8 0.0 12 46 157 191 150 210 0.85 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 4_15 - 876 Pox_A32 PF04665.7 241 0.0011 11.9 0.0 1 1 5.5e-05 0.0032 10.4 0.0 6 38 472 504 469 519 0.85 # 8001 # 10628 # -1 # ID=4_15;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.533 2_27 - 510 AAA_14 PF13173.1 128 2.1e-05 18.1 0.0 1 2 6.5e-06 0.00037 14.1 0.0 6 89 130 213 125 234 0.76 # 18911 # 20440 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.438 2_27 - 510 AAA_14 PF13173.1 128 2.1e-05 18.1 0.0 2 2 0.065 3.7 1.1 0.0 53 81 340 372 300 391 0.57 # 18911 # 20440 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.438 1_50 - 358 AAA_14 PF13173.1 128 0.00018 15.1 0.0 1 1 7.7e-06 0.00044 13.8 0.0 2 24 27 49 26 90 0.77 # 41330 # 42403 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.617 2_19 - 332 AAA_14 PF13173.1 128 0.00047 13.7 0.1 1 2 0.0067 0.38 4.3 0.0 64 96 135 165 98 166 0.69 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 2_19 - 332 AAA_14 PF13173.1 128 0.00047 13.7 0.1 2 2 9.2e-05 0.0053 10.4 0.0 2 35 158 191 157 215 0.80 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_14 - 389 VirC1 PF07015.6 231 0.00011 14.9 0.1 1 2 0.00028 0.048 6.3 0.0 4 42 109 147 107 154 0.91 # 10453 # 11619 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_14 - 389 VirC1 PF07015.6 231 0.00011 14.9 0.1 2 2 0.0003 0.052 6.2 0.1 84 139 235 290 222 312 0.77 # 10453 # 11619 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 5_2 - 202 HTH_Tnp_ISL3 PF13542.1 52 7.1e-05 15.7 0.2 1 1 1e-06 0.00017 14.4 0.2 29 51 175 197 166 198 0.85 # 709 # 1314 # -1 # ID=5_2;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.558 1_14 - 389 MerR PF00376.18 38 6.5e-07 22.6 0.0 1 1 8.8e-09 1.5e-06 21.4 0.0 1 28 41 68 41 74 0.95 # 10453 # 11619 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_50 - 358 AAA_33 PF13671.1 143 1.6e-05 18.5 0.4 1 1 6.4e-07 5.5e-05 16.7 0.4 2 22 30 50 29 201 0.70 # 41330 # 42403 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.617 2_19 - 332 AAA_33 PF13671.1 143 0.00061 13.3 0.0 1 1 1.2e-05 0.001 12.6 0.0 2 26 161 188 160 256 0.81 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 5_2 - 202 CENP-B_N PF04218.8 53 0.00027 14.0 0.0 1 1 3.9e-06 0.00068 12.8 0.0 21 45 172 196 165 199 0.87 # 709 # 1314 # -1 # ID=5_2;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.558 1_50 - 358 ABC_ATPase PF09818.4 448 0.001 11.3 1.2 1 2 0.0019 0.32 3.1 0.0 240 264 22 47 14 50 0.87 # 41330 # 42403 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.617 1_50 - 358 ABC_ATPase PF09818.4 448 0.001 11.3 1.2 2 2 0.00015 0.026 6.7 0.3 378 418 172 212 131 222 0.90 # 41330 # 42403 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.617 2_27 - 510 T4SS-DNA_transf PF02534.9 469 9.3e-12 37.8 0.0 1 1 2.4e-13 1.4e-11 37.3 0.0 263 426 313 472 297 500 0.74 # 18911 # 20440 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.438 3_12 - 745 T4SS-DNA_transf PF02534.9 469 5.1e-10 32.1 0.0 1 1 4e-11 2.3e-09 30.0 0.0 263 366 381 481 198 500 0.83 # 13176 # 15410 # -1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.528 4_15 - 876 T4SS-DNA_transf PF02534.9 469 5.9e-06 18.7 0.0 1 2 0.00035 0.02 7.1 0.0 105 186 533 608 475 623 0.88 # 8001 # 10628 # -1 # ID=4_15;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.533 4_15 - 876 T4SS-DNA_transf PF02534.9 469 5.9e-06 18.7 0.0 2 2 7e-05 0.004 9.4 0.0 319 378 711 769 663 771 0.90 # 8001 # 10628 # -1 # ID=4_15;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.533 1_1 - 181 MTS PF05175.9 170 8.7e-08 25.4 0.0 1 1 6.9e-10 1.2e-07 24.9 0.0 31 115 50 129 41 141 0.85 # 469 # 1011 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.589 4_28 - 128 Arg_repressor PF01316.16 70 0.00089 12.5 0.5 1 2 0.0046 0.8 3.1 0.0 18 51 12 48 2 57 0.69 # 17424 # 17807 # -1 # ID=4_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 4_28 - 128 Arg_repressor PF01316.16 70 0.00089 12.5 0.5 2 2 0.00013 0.022 8.0 0.1 15 45 56 85 52 86 0.87 # 17424 # 17807 # -1 # ID=4_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 2_19 - 332 RNA_helicase PF00910.17 107 3.5e-05 17.7 0.1 1 2 1e-05 0.0006 13.7 0.0 1 25 161 185 161 242 0.75 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 2_19 - 332 RNA_helicase PF00910.17 107 3.5e-05 17.7 0.1 2 2 0.081 4.7 1.2 0.1 69 100 290 322 281 328 0.78 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 4_19 - 107 RNA_helicase PF00910.17 107 0.00021 15.1 0.0 1 1 8.2e-06 0.00047 14.0 0.0 1 29 75 103 75 106 0.91 # 11900 # 12220 # -1 # ID=4_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 1_50 - 358 RNA_helicase PF00910.17 107 0.00081 13.3 0.0 1 1 3.3e-05 0.0019 12.1 0.0 1 19 30 48 30 73 0.91 # 41330 # 42403 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.617 2_19 - 332 AAA_2 PF07724.9 171 9.7e-06 19.2 0.0 1 1 1e-07 1.8e-05 18.4 0.0 3 54 158 204 156 216 0.89 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_35 - 168 DDE_Tnp_IS1 PF03400.8 131 1.8e-79 257.9 0.8 1 1 1.2e-81 2.1e-79 257.7 0.8 1 131 37 167 37 167 0.99 # 29958 # 30461 # -1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.548 2_13 - 238 3HCDH_N PF02737.13 180 0.0023 11.3 1.9 1 2 0.00032 0.055 6.8 0.1 68 118 33 83 18 86 0.84 # 6891 # 7604 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.508 2_13 - 238 3HCDH_N PF02737.13 180 0.0023 11.3 1.9 2 2 0.0023 0.39 4.0 0.2 41 80 143 180 111 210 0.68 # 6891 # 7604 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.508 4_19 - 107 TIGR01039 TIGR01039 462 0.0011 11.0 0.0 1 1 6.8e-06 0.0012 11.0 0.0 138 172 66 100 19 103 0.76 # 11900 # 12220 # -1 # ID=4_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 1_24 - 538 Med9 PF07544.8 83 0.028 7.9 9.6 1 2 0.018 3.1 1.4 0.7 48 69 10 31 3 42 0.83 # 18176 # 19789 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.546 1_24 - 538 Med9 PF07544.8 83 0.028 7.9 9.6 2 2 3.2e-05 0.0054 10.2 2.5 51 75 48 72 32 78 0.92 # 18176 # 19789 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.546 9_1 - 207 DDE_Tnp_IS240 PF13610.1 140 1.8e-48 157.8 0.0 1 1 4.3e-50 2.5e-48 157.3 0.0 4 128 81 207 79 207 0.99 # 3 # 623 # 1 # ID=9_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.541 2_1 - 75 DDE_Tnp_IS240 PF13610.1 140 4.5e-15 49.5 0.0 1 1 8.8e-17 5e-15 49.4 0.0 88 139 1 52 1 53 0.98 # 3 # 227 # 1 # ID=2_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.480 1_53 - 124 DDE_Tnp_IS240 PF13610.1 140 0.00033 14.3 0.0 1 1 6.8e-06 0.00039 14.1 0.0 65 137 22 95 3 97 0.84 # 44405 # 44776 # -1 # ID=1_53;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 1_50 - 358 PduV-EutP PF10662.4 143 0.0016 11.7 0.1 1 1 2.1e-05 0.0036 10.5 0.0 4 25 30 51 28 68 0.90 # 41330 # 42403 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.617 1_32 - 522 TIGR00634 TIGR00634 563 0.00039 12.7 0.2 1 1 4.2e-06 0.00072 11.9 0.0 1 46 3 48 3 69 0.93 # 27132 # 28697 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 1_43 - 251 MarR_2 PF12802.2 62 0.0015 11.9 0.0 1 1 2.4e-05 0.0041 10.5 0.0 8 53 13 56 10 60 0.89 # 34671 # 35423 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.494 2_26 - 1079 PIF1 PF05970.9 364 3.4e-06 19.8 0.1 1 2 1.3e-07 2.3e-05 17.1 0.0 2 65 478 537 477 587 0.85 # 15675 # 18911 # -1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 2_26 - 1079 PIF1 PF05970.9 364 3.4e-06 19.8 0.1 2 2 0.087 15 -2.0 0.0 334 363 795 823 782 824 0.84 # 15675 # 18911 # -1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 1_43 - 251 TrmB PF01978.14 68 7.8e-05 16.0 0.0 1 1 1.8e-06 0.00016 15.1 0.0 12 60 14 62 11 68 0.89 # 34671 # 35423 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.494 8_2 - 186 TrmB PF01978.14 68 9.5e-05 15.8 0.0 1 1 2.3e-06 0.0002 14.8 0.0 19 44 155 180 150 181 0.89 # 435 # 992 # 1 # ID=8_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 2_26 - 1079 Helicase_RecD PF05127.9 177 2.7e-05 17.5 5.1 1 2 0.00059 0.1 5.9 0.1 122 146 498 522 481 539 0.76 # 15675 # 18911 # -1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 2_26 - 1079 Helicase_RecD PF05127.9 177 2.7e-05 17.5 5.1 2 2 5.1e-06 0.00088 12.6 0.1 74 115 547 586 523 653 0.62 # 15675 # 18911 # -1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 1_32 - 522 DUF2813 PF11398.3 373 5.6e-05 16.0 1.2 1 2 4.6e-06 0.0008 12.2 0.0 11 49 12 51 3 56 0.79 # 27132 # 28697 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 1_32 - 522 DUF2813 PF11398.3 373 5.6e-05 16.0 1.2 2 2 0.0067 1.2 1.8 0.0 287 333 279 326 250 333 0.82 # 27132 # 28697 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 4_15 - 876 AAA_10 PF12846.2 304 2.4e-49 162.0 0.1 1 1 1.7e-50 4.1e-49 161.2 0.1 1 299 479 773 479 776 0.90 # 8001 # 10628 # -1 # ID=4_15;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.533 2_12 - 867 AAA_10 PF12846.2 304 4.3e-35 115.2 0.1 1 1 5.6e-36 1.4e-34 113.6 0.0 2 292 492 772 491 780 0.84 # 4273 # 6873 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 3_12 - 745 AAA_10 PF12846.2 304 1.1e-07 25.3 0.0 1 1 4.6e-08 1.1e-06 21.9 0.0 3 296 187 494 186 500 0.67 # 13176 # 15410 # -1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.528 2_27 - 510 AAA_10 PF12846.2 304 9.3e-07 22.2 0.1 1 2 4.8e-05 0.0012 12.0 0.1 3 41 128 166 126 177 0.92 # 18911 # 20440 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.438 2_27 - 510 AAA_10 PF12846.2 304 9.3e-07 22.2 0.1 2 2 0.00079 0.019 8.0 0.0 214 286 339 414 307 431 0.75 # 18911 # 20440 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.438 4_19 - 107 AAA_10 PF12846.2 304 2.1e-05 17.7 0.0 1 2 0.011 0.26 4.3 0.0 272 290 20 42 7 55 0.77 # 11900 # 12220 # -1 # ID=4_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 4_19 - 107 AAA_10 PF12846.2 304 2.1e-05 17.7 0.0 2 2 5.3e-05 0.0013 11.8 0.0 2 24 73 95 72 100 0.87 # 11900 # 12220 # -1 # ID=4_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 2_19 - 332 AAA_10 PF12846.2 304 0.00045 13.3 0.0 1 1 2.9e-05 0.00071 12.7 0.0 3 29 160 185 158 233 0.81 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_50 - 358 AAA_10 PF12846.2 304 0.00089 12.4 0.0 1 1 6e-05 0.0015 11.7 0.0 4 22 30 48 28 79 0.86 # 41330 # 42403 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.617 8_2 - 186 HTH_20 PF12840.2 61 3.4e-06 20.5 0.2 1 2 0.0074 0.64 3.6 0.0 33 52 8 27 4 28 0.91 # 435 # 992 # 1 # ID=8_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 8_2 - 186 HTH_20 PF12840.2 61 3.4e-06 20.5 0.2 2 2 1.8e-05 0.0016 12.0 0.1 3 43 110 177 108 180 0.91 # 435 # 992 # 1 # ID=8_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 1_43 - 251 HTH_20 PF12840.2 61 0.00079 12.9 0.0 1 1 2.4e-05 0.002 11.6 0.0 13 48 13 48 11 58 0.88 # 34671 # 35423 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.494 1_1 - 181 RrnaAD PF00398.15 262 4.4e-09 29.4 0.0 1 1 3.2e-11 5.4e-09 29.1 0.0 9 113 29 128 24 157 0.87 # 469 # 1011 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.589 1_1 - 181 Methyltransf_18 PF12847.2 112 5.9e-08 27.0 0.0 1 1 7.7e-10 1.3e-07 25.9 0.0 4 105 53 142 50 146 0.87 # 469 # 1011 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.589 1_14 - 389 ArsA_ATPase PF02374.10 305 3e-06 20.1 0.4 1 2 1.7e-06 0.00028 13.6 0.1 9 36 115 142 109 151 0.89 # 10453 # 11619 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_14 - 389 ArsA_ATPase PF02374.10 305 3e-06 20.1 0.4 2 2 0.0011 0.19 4.3 0.0 123 136 231 244 221 251 0.84 # 10453 # 11619 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_50 - 358 Septin PF00735.13 281 0.00023 13.9 0.0 1 1 2.5e-06 0.00042 13.0 0.0 7 92 30 117 26 131 0.83 # 41330 # 42403 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.617 1_14 - 389 AAA_31 PF13614.1 157 1.7e-09 31.5 0.0 1 2 1.4e-08 2.4e-06 21.3 0.0 2 49 108 155 107 195 0.91 # 10453 # 11619 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_14 - 389 AAA_31 PF13614.1 157 1.7e-09 31.5 0.0 2 2 0.00018 0.031 7.9 0.1 110 152 227 268 223 272 0.84 # 10453 # 11619 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 2_19 - 332 IstB_IS21 PF01695.12 178 4.7e-05 16.5 0.0 1 1 4.5e-07 7.7e-05 15.8 0.0 44 73 155 184 127 201 0.82 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_46 - 297 DHDPS PF00701.17 289 4.4e-51 166.8 0.0 1 1 3e-53 5.1e-51 166.6 0.0 1 278 6 287 6 294 0.92 # 36872 # 37762 # -1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.507 2_38 - 422 DNA_pol_lambd_f PF10391.4 52 3.9e-06 20.1 0.1 1 2 3e-07 5.1e-05 16.5 0.0 6 35 182 211 180 216 0.84 # 27466 # 28731 # -1 # ID=2_38;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.538 2_38 - 422 DNA_pol_lambd_f PF10391.4 52 3.9e-06 20.1 0.1 2 2 0.048 8.2 -0.2 0.0 6 20 265 279 256 283 0.80 # 27466 # 28731 # -1 # ID=2_38;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.538 3_11 - 1757 AAA_11 PF13086.1 236 0.00012 15.3 3.1 1 2 2.2e-06 0.00038 13.7 0.0 2 75 969 1039 968 1057 0.82 # 7906 # 13176 # -1 # ID=3_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.601 3_11 - 1757 AAA_11 PF13086.1 236 0.00012 15.3 3.1 2 2 0.048 8.3 -0.5 0.0 197 232 1068 1106 1061 1107 0.80 # 7906 # 13176 # -1 # ID=3_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.601 6_7 - 176 SSB PF00436.20 104 1.5e-40 130.9 0.3 1 1 1.1e-42 1.9e-40 130.6 0.3 1 101 6 109 6 112 0.95 # 4454 # 4981 # -1 # ID=6_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.583 1_22 - 142 BrkDBD PF09607.5 58 0.00016 14.9 0.9 1 1 1.3e-06 0.00022 14.5 0.0 3 48 11 53 10 59 0.91 # 17373 # 17798 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.491 1_54 - 153 HTH_21 PF13276.1 60 1.3e-18 60.5 8.2 1 3 0.03 5.1 0.9 0.0 14 31 4 21 2 31 0.81 # 44835 # 45293 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.545 1_54 - 153 HTH_21 PF13276.1 60 1.3e-18 60.5 8.2 2 3 1e-20 1.7e-18 60.1 3.6 2 60 46 103 44 103 0.92 # 44835 # 45293 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.545 1_54 - 153 HTH_21 PF13276.1 60 1.3e-18 60.5 8.2 3 3 0.087 15 -0.6 0.1 37 44 107 114 105 115 0.85 # 44835 # 45293 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.545 2_19 - 332 GTP_EFTU PF00009.22 188 0.00038 13.6 0.2 1 1 3.5e-06 0.0006 12.9 0.2 2 32 157 187 156 205 0.83 # 11909 # 12904 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/9479025d-5ffc-447e-a8dd-e316ce707496 # Target file: checkm_output/bins/pm1991/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1991/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/9479025d-5ffc-447e-a8dd-e316ce707496 checkm_output/bins/pm1991/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:57:23 2017 # [ok]