# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_7 - 502 DUF3584 PF12128.3 1201 4.9e-05 9.9 49.7 1 2 6e-06 4.2e-05 10.1 37.1 339 533 57 253 44 266 0.83 # 5138 # 6643 # 1 # ID=1_7;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 1_7 - 502 DUF3584 PF12128.3 1201 4.9e-05 9.9 49.7 2 2 0.00013 0.00093 5.6 4.7 642 725 296 376 272 452 0.43 # 5138 # 6643 # 1 # ID=1_7;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 1_6 - 146 AAA_23 PF13476.1 202 0.00012 11.6 4.0 1 1 1.9e-05 0.00013 11.4 4.0 128 202 45 131 13 135 0.55 # 4441 # 4878 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.518 1_6 - 146 TIGR02350 TIGR02350 596 2.2e-05 11.7 1.2 1 1 3.8e-06 2.7e-05 11.4 1.2 487 571 48 134 29 138 0.83 # 4441 # 4878 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.518 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/ab00f872-71d0-4ce5-840f-c3103325c3e8 # Target file: checkm_output/bins/pm1985/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1985/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/ab00f872-71d0-4ce5-840f-c3103325c3e8 checkm_output/bins/pm1985/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:57:07 2017 # [ok]