# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_4 - 140 HSP70 PF00012.15 602 9.2e-05 9.9 5.2 1 1 1.3e-05 0.00012 9.5 5.2 477 583 25 133 21 137 0.72 # 3678 # 4097 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.476 1_3 - 593 DUF3584 PF12128.3 1201 0.097 -0.7 40.1 1 2 0.023 0.21 -1.8 8.8 454 522 210 278 166 285 0.52 # 1645 # 3423 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.497 1_3 - 593 DUF3584 PF12128.3 1201 0.097 -0.7 40.1 2 2 8.1e-05 0.00073 6.3 23.7 588 748 306 465 302 487 0.80 # 1645 # 3423 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.497 1_4 - 140 AAA_23 PF13476.1 202 0.0003 10.6 12.2 1 1 3.9e-05 0.00035 10.4 12.2 128 196 39 126 3 130 0.50 # 3678 # 4097 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.476 1_3 - 593 Mnd1 PF03962.10 188 0.021 3.9 26.6 1 2 0.00035 0.0016 7.6 1.8 83 163 172 253 167 258 0.81 # 1645 # 3423 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.497 1_3 - 593 Mnd1 PF03962.10 188 0.021 3.9 26.6 2 2 0.0034 0.015 4.4 2.6 61 135 252 326 249 347 0.74 # 1645 # 3423 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.497 1_4 - 140 Mnd1 PF03962.10 188 0.029 3.5 18.1 1 2 0.021 0.093 1.8 5.2 96 143 52 99 14 102 0.74 # 3678 # 4097 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.476 1_4 - 140 Mnd1 PF03962.10 188 0.029 3.5 18.1 2 2 0.012 0.053 2.6 17.2 70 131 67 129 48 133 0.65 # 3678 # 4097 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.476 1_4 - 140 TIGR02350 TIGR02350 596 1.9e-05 12.3 3.9 1 1 2.5e-06 2.3e-05 12.0 3.9 471 572 25 129 19 136 0.79 # 3678 # 4097 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.476 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/84de19a7-6ca6-4c48-ab98-27c940886669 # Target file: checkm_output/bins/pm1984/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1984/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/84de19a7-6ca6-4c48-ab98-27c940886669 checkm_output/bins/pm1984/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:56:59 2017 # [ok]