# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_2 - 322 CsgG PF03783.9 209 2.6e-05 11.3 0.1 1 1 1.4e-05 4.1e-05 10.6 0.1 129 145 207 223 204 236 0.89 # 418 # 1383 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.514 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/1cc6c1ae-9ff8-4b9e-b48e-1f7dac9c0eaa # Target file: checkm_output/bins/pm1983/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1983/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/1cc6c1ae-9ff8-4b9e-b48e-1f7dac9c0eaa checkm_output/bins/pm1983/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:56:59 2017 # [ok]