# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_4 - 519 HMGL-like PF00682.14 237 2.1e-95 307.9 0.8 1 1 4.3e-96 3e-95 307.5 0.8 1 236 13 251 13 252 0.99 # 3142 # 4698 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.305 1_4 - 519 Trp_syntA PF00290.15 259 3.4e-06 14.8 0.0 1 1 1.8e-06 1.3e-05 13.0 0.0 23 50 25 52 20 66 0.91 # 3142 # 4698 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.305 1_5 - 251 HTH_36 PF13730.1 55 1.5e-05 14.3 2.7 1 2 5.2e-05 0.00036 9.9 0.1 9 38 75 105 73 116 0.92 # 4835 # 5587 # -1 # ID=1_5;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.247 1_5 - 251 HTH_36 PF13730.1 55 1.5e-05 14.3 2.7 2 2 0.0089 0.062 2.7 0.3 27 48 163 184 151 249 0.71 # 4835 # 5587 # -1 # ID=1_5;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.247 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/d5e94fb9-0ab1-4056-99fc-b1c7045f351f # Target file: checkm_output/bins/pm1978/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1978/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/d5e94fb9-0ab1-4056-99fc-b1c7045f351f checkm_output/bins/pm1978/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:56:53 2017 # [ok]