# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_2 - 99 DUF3173 PF11372.3 59 5.3e-06 15.6 0.3 1 2 2.3e-05 0.00021 10.5 0.1 8 25 21 38 19 77 0.80 # 1857 # 2153 # -1 # ID=1_2;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.529 1_2 - 99 DUF3173 PF11372.3 59 5.3e-06 15.6 0.3 2 2 0.0022 0.02 4.1 0.1 13 33 58 78 54 94 0.81 # 1857 # 2153 # -1 # ID=1_2;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.529 1_5 - 130 NmrA PF05368.8 233 2.4e-06 16.4 0.5 1 2 1.7e-05 0.00015 10.5 0.1 188 228 45 85 22 91 0.90 # 2928 # 3317 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_5 - 130 NmrA PF05368.8 233 2.4e-06 16.4 0.5 2 2 0.0011 0.0097 4.6 0.0 196 223 102 129 91 129 0.86 # 2928 # 3317 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/8b235ae0-709e-4193-8413-0c85c555f3ae # Target file: checkm_output/bins/pm1971/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1971/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/8b235ae0-709e-4193-8413-0c85c555f3ae checkm_output/bins/pm1971/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:56:43 2017 # [ok]