# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_23 - 575 Peptidase_M66 PF10462.4 305 5.5e-06 16.9 1.9 1 1 2.8e-07 1e-05 16.0 1.9 166 222 459 519 452 525 0.67 # 16803 # 18527 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.430 1_3 - 518 BcrAD_BadFG PF01869.15 271 1.4e-08 25.8 0.8 1 2 3.7e-09 1.4e-07 22.5 0.2 1 80 5 77 5 86 0.85 # 2374 # 3927 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.356 1_3 - 518 BcrAD_BadFG PF01869.15 271 1.4e-08 25.8 0.8 2 2 0.016 0.58 0.8 0.0 3 16 273 286 273 420 0.49 # 2374 # 3927 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.356 1_25 - 207 rve_3 PF13683.1 67 5.7e-20 62.2 0.1 1 1 3.1e-21 1.2e-19 61.2 0.1 3 67 131 195 129 195 0.96 # 19385 # 20005 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 1_32 - 87 HTH_40 PF14493.1 91 1.2e-05 17.0 0.0 1 1 3.8e-07 1.4e-05 16.8 0.0 7 42 27 62 21 85 0.84 # 23654 # 23914 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.314 1_32 - 87 HTH_38 PF13936.1 44 2.4e-06 18.6 0.0 1 1 9.4e-08 3.5e-06 18.1 0.0 12 42 25 55 17 56 0.81 # 23654 # 23914 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.314 1_3 - 518 FGGY_N PF00370.16 245 7.4e-05 13.6 0.5 1 1 4.9e-06 0.00018 12.3 0.5 3 33 5 35 3 82 0.88 # 2374 # 3927 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.356 1_12 - 214 CbiA PF01656.18 195 2.5e-23 73.9 0.0 1 1 9.7e-25 3.6e-23 73.5 0.0 1 194 3 182 3 183 0.79 # 9005 # 9646 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.555 1_32 - 87 Sigma70_r4_2 PF08281.7 54 1.2e-09 29.1 0.0 1 1 8.6e-11 1.6e-09 28.7 0.0 9 48 17 55 15 60 0.92 # 23654 # 23914 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.314 1_2 - 228 Sigma70_r4_2 PF08281.7 54 7.4e-06 16.9 0.0 1 1 8e-07 1.5e-05 16.0 0.0 24 48 164 188 154 189 0.88 # 1575 # 2258 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.335 1_23 - 575 Peptidase_M10 PF00413.19 154 1.7e-05 16.0 1.0 1 1 2.5e-06 9.3e-05 13.7 1.0 100 127 487 515 355 525 0.57 # 16803 # 18527 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.430 1_25 - 207 rve PF00665.21 120 6.3e-22 69.5 0.0 1 1 2.6e-23 9.4e-22 68.9 0.0 5 119 39 157 35 158 0.96 # 19385 # 20005 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 1_12 - 214 YhjQ PF06564.7 244 0.00032 11.6 1.3 1 2 5.6e-05 0.0021 8.9 0.4 4 38 3 37 1 72 0.78 # 9005 # 9646 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.555 1_12 - 214 YhjQ PF06564.7 244 0.00032 11.6 1.3 2 2 0.0085 0.31 1.8 0.0 106 145 71 108 51 114 0.76 # 9005 # 9646 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.555 1_28 - 89 HTH_Tnp_1 PF01527.15 76 3.6e-19 60.1 0.1 1 1 2.3e-20 4.3e-19 59.9 0.1 2 62 18 85 17 88 0.87 # 20926 # 21192 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.551 1_24 - 50 HTH_Tnp_1 PF01527.15 76 2.8e-11 34.8 0.1 1 1 1.6e-12 2.9e-11 34.8 0.1 25 55 2 40 1 49 0.68 # 18906 # 19055 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_32 - 87 GerE PF00196.14 58 1.6e-13 41.3 0.1 1 1 1.1e-14 2e-13 41.1 0.1 2 45 17 60 16 72 0.92 # 23654 # 23914 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.314 1_2 - 228 GerE PF00196.14 58 1.4e-11 35.1 1.1 1 2 0.012 0.22 2.5 0.1 41 56 121 136 119 138 0.86 # 1575 # 2258 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.335 1_2 - 228 GerE PF00196.14 58 1.4e-11 35.1 1.1 2 2 1.2e-11 2.3e-10 31.2 0.1 2 52 150 200 149 205 0.93 # 1575 # 2258 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.335 1_12 - 214 MipZ PF09140.6 261 1.3e-14 45.3 0.4 1 1 1.2e-14 4.4e-13 40.3 0.4 2 129 2 111 1 135 0.85 # 9005 # 9646 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.555 1_21 - 234 DDE_Tnp_1 PF01609.16 213 1.6e-20 65.0 0.4 1 1 5.7e-22 2.1e-20 64.6 0.4 3 206 31 204 29 210 0.82 # 15494 # 16195 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.531 1_23 - 575 Reprolysin_5 PF13688.1 196 2.2e-09 29.0 0.0 1 1 1.2e-10 4.4e-09 28.0 0.0 4 189 377 538 374 544 0.74 # 16803 # 18527 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.430 1_2 - 228 Sigma70_r4 PF04545.11 50 9.5e-05 13.3 0.1 1 1 8.3e-06 0.00031 11.6 0.0 19 40 165 186 153 193 0.83 # 1575 # 2258 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.335 1_3 - 518 Hydantoinase_A PF01968.13 290 7.2e-58 187.4 4.3 1 2 0.00078 0.029 4.9 0.2 81 97 6 22 4 40 0.78 # 2374 # 3927 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.356 1_3 - 518 Hydantoinase_A PF01968.13 290 7.2e-58 187.4 4.3 2 2 2.7e-58 1e-56 183.6 0.6 1 286 193 447 193 451 0.96 # 2374 # 3927 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.356 1_24 - 50 MerR_1 PF13411.1 69 0.00034 11.9 0.0 1 1 1.1e-05 0.00042 11.6 0.0 1 24 1 24 1 30 0.95 # 18906 # 19055 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_12 - 214 SRP54 PF00448.17 196 0.00053 11.0 0.8 1 1 2.3e-05 0.00084 10.3 0.8 11 97 11 94 2 103 0.75 # 9005 # 9646 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.555 1_17 - 121 MRP-L47 PF06984.8 87 0.00012 13.5 0.1 1 1 4.1e-06 0.00015 13.2 0.1 26 84 49 108 20 110 0.87 # 12883 # 13245 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.380 1_28 - 89 HTH_23 PF13384.1 50 9.7e-10 29.5 0.0 1 1 1.5e-10 1.4e-09 29.0 0.0 3 47 24 69 22 72 0.89 # 20926 # 21192 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.551 1_32 - 87 HTH_23 PF13384.1 50 1.2e-06 19.6 0.0 1 1 1.8e-07 1.6e-06 19.2 0.0 8 35 24 51 18 64 0.89 # 23654 # 23914 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.314 1_2 - 228 HTH_23 PF13384.1 50 1.8e-06 19.1 0.0 1 1 3.6e-07 3.3e-06 18.2 0.0 8 46 157 196 153 199 0.80 # 1575 # 2258 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.335 1_24 - 50 HTH_23 PF13384.1 50 2.8e-06 18.5 0.0 1 1 3.7e-07 3.4e-06 18.2 0.0 19 47 2 30 1 33 0.85 # 18906 # 19055 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_32 - 87 HTH_7 PF02796.10 45 0.00039 11.8 0.0 1 1 1.7e-05 0.00062 11.2 0.0 5 38 18 50 17 50 0.87 # 23654 # 23914 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.314 1_3 - 518 TIGR00174 TIGR00174 288 0.00031 11.2 0.1 1 1 1.5e-05 0.00055 10.4 0.1 38 116 357 433 327 477 0.78 # 2374 # 3927 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.356 1_2 - 228 FeoC PF09012.5 69 0.00023 12.4 0.0 1 1 1.5e-05 0.00055 11.2 0.0 13 61 165 210 155 216 0.80 # 1575 # 2258 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.335 1_28 - 89 HTH_29 PF13551.1 112 1.3e-06 20.1 0.1 1 1 1.4e-07 2.6e-06 19.1 0.0 8 45 36 72 28 88 0.82 # 20926 # 21192 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.551 1_24 - 50 HTH_29 PF13551.1 112 7.6e-06 17.6 0.0 1 1 4.1e-07 7.6e-06 17.6 0.0 14 46 2 34 1 49 0.83 # 18906 # 19055 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_23 - 575 Reprolysin_4 PF13583.1 206 6.8e-09 27.0 0.1 1 1 3.9e-10 1.5e-08 25.9 0.1 7 169 380 519 373 542 0.73 # 16803 # 18527 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.430 1_12 - 214 TIGR01968 TIGR01968 261 4.8e-09 27.1 2.2 1 2 6.3e-09 2.3e-07 21.5 0.7 3 39 2 38 1 45 0.95 # 9005 # 9646 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.555 1_12 - 214 TIGR01968 TIGR01968 261 4.8e-09 27.1 2.2 2 2 0.00058 0.021 5.3 0.0 100 162 69 131 59 171 0.76 # 9005 # 9646 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.555 1_3 - 518 MutL PF13941.1 457 1.8e-10 31.1 1.4 1 2 1.9e-06 7.1e-05 12.7 0.2 3 54 5 50 4 70 0.88 # 2374 # 3927 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.356 1_3 - 518 MutL PF13941.1 457 1.8e-10 31.1 1.4 2 2 7.9e-08 2.9e-06 17.2 0.1 239 275 258 295 240 304 0.76 # 2374 # 3927 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.356 1_2 - 228 HTH_psq PF05225.11 45 8.8e-05 13.6 0.0 1 1 5.2e-06 0.00019 12.5 0.0 22 41 172 191 165 194 0.87 # 1575 # 2258 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.335 1_23 - 575 Reprolysin PF01421.14 199 4.3e-06 17.9 0.3 1 1 4.7e-07 1.7e-05 15.9 0.3 4 152 379 514 377 537 0.71 # 16803 # 18527 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.430 1_28 - 89 HTH_28 PF13518.1 52 7.3e-09 27.1 0.6 1 1 8.4e-10 1e-08 26.6 0.0 1 40 27 67 27 71 0.92 # 20926 # 21192 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.551 1_2 - 228 HTH_28 PF13518.1 52 4e-07 21.5 0.0 1 1 5.9e-08 7.3e-07 20.7 0.0 9 43 163 198 157 202 0.85 # 1575 # 2258 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.335 1_24 - 50 HTH_28 PF13518.1 52 2.2e-06 19.2 0.0 1 1 2.1e-07 2.5e-06 19.0 0.0 14 43 2 31 1 37 0.88 # 18906 # 19055 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.567 1_2 - 228 DUF2089 PF09862.4 113 2e-05 15.9 0.1 1 1 8.2e-07 3e-05 15.3 0.1 32 80 150 197 123 204 0.82 # 1575 # 2258 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.335 1_2 - 228 HTH_24 PF13412.1 48 1.4e-05 16.0 0.1 1 1 1.6e-06 3e-05 14.9 0.1 17 39 166 188 165 189 0.93 # 1575 # 2258 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.335 1_32 - 87 HTH_24 PF13412.1 48 0.00026 11.9 0.0 1 1 2.5e-05 0.00046 11.1 0.0 11 39 27 55 26 56 0.92 # 23654 # 23914 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.314 1_2 - 228 HTH_10 PF04967.7 53 6.5e-06 17.3 0.2 1 1 1e-06 1.9e-05 15.7 0.2 23 50 166 193 152 194 0.88 # 1575 # 2258 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.335 1_32 - 87 HTH_10 PF04967.7 53 9e-05 13.6 0.1 1 1 2.2e-05 0.00041 11.5 0.0 27 50 37 60 33 61 0.92 # 23654 # 23914 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.314 1_3 - 518 StbA PF06406.6 318 0.00014 12.3 0.1 1 3 0.038 1.4 -0.8 0.7 169 218 7 57 4 84 0.58 # 2374 # 3927 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.356 1_3 - 518 StbA PF06406.6 318 0.00014 12.3 0.1 2 3 3.8e-06 0.00014 12.3 0.1 158 185 262 289 253 302 0.82 # 2374 # 3927 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.356 1_3 - 518 StbA PF06406.6 318 0.00014 12.3 0.1 3 3 0.0087 0.32 1.3 0.1 245 293 378 425 369 442 0.75 # 2374 # 3927 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.356 1_12 - 214 AAA_25 PF13481.1 194 2.8e-05 15.1 0.8 1 1 1.2e-06 4.3e-05 14.5 0.8 41 72 9 41 3 142 0.86 # 9005 # 9646 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.555 1_23 - 575 Reprolysin_2 PF13574.1 174 3e-08 25.4 0.1 1 1 2e-09 7.3e-08 24.1 0.1 5 151 398 529 394 543 0.78 # 16803 # 18527 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.430 1_3 - 518 Hydant_A_N PF05378.8 176 1.3e-36 117.2 3.7 1 2 1.3e-35 4.8e-34 108.9 0.2 1 175 4 173 4 174 0.86 # 2374 # 3927 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.356 1_3 - 518 Hydant_A_N PF05378.8 176 1.3e-36 117.2 3.7 2 2 8.8e-05 0.0033 8.4 0.4 2 18 271 287 270 306 0.84 # 2374 # 3927 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.356 1_12 - 214 VirC1 PF07015.6 231 4e-05 14.2 0.1 1 1 1.8e-06 6.5e-05 13.6 0.1 3 186 2 185 1 207 0.63 # 9005 # 9646 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.555 1_23 - 575 Peptidase_M11 PF05548.6 314 1.2e-05 15.8 1.1 1 2 0.026 0.98 -0.3 0.0 213 259 124 166 120 181 0.65 # 16803 # 18527 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.430 1_23 - 575 Peptidase_M11 PF05548.6 314 1.2e-05 15.8 1.1 2 2 3.3e-07 1.2e-05 15.8 1.1 130 182 473 528 470 539 0.78 # 16803 # 18527 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.430 1_28 - 89 HTH_Tnp_ISL3 PF13542.1 52 7.4e-05 13.5 0.2 1 1 9.1e-06 0.00017 12.3 0.1 8 44 19 56 18 56 0.84 # 20926 # 21192 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.551 1_2 - 228 HTH_Tnp_ISL3 PF13542.1 52 9.8e-05 13.1 0.0 1 1 8.9e-06 0.00016 12.3 0.0 26 48 165 187 162 190 0.88 # 1575 # 2258 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.335 1_28 - 89 CENP-B_N PF04218.8 53 1.8e-05 15.7 0.1 1 1 7.8e-07 2.9e-05 15.0 0.1 4 42 20 59 18 64 0.86 # 20926 # 21192 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.551 1_23 - 575 Reprolysin_3 PF13582.1 124 1.3e-17 56.0 0.0 1 1 7.7e-19 2.8e-17 54.9 0.0 3 123 400 509 398 510 0.86 # 16803 # 18527 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.430 1_23 - 575 Astacin PF01400.19 191 0.00014 12.8 0.0 1 1 6.9e-06 0.00026 11.9 0.0 49 96 463 510 426 526 0.79 # 16803 # 18527 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.430 1_25 - 207 DDE_Tnp_IS240 PF13610.1 140 0.0002 12.8 0.1 1 1 7.5e-06 0.00028 12.4 0.1 53 134 100 182 91 188 0.80 # 19385 # 20005 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 1_2 - 228 HTH_11 PF08279.7 55 6.4e-08 23.7 0.1 1 1 7.4e-09 1.4e-07 22.7 0.1 14 43 165 195 153 201 0.81 # 1575 # 2258 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.335 1_32 - 87 HTH_11 PF08279.7 55 2.5e-05 15.5 0.0 1 1 2.3e-06 4.2e-05 14.7 0.0 6 37 24 55 20 56 0.83 # 23654 # 23914 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.314 1_21 - 234 DDE_Tnp_1_5 PF13737.1 112 2.3e-12 38.6 0.0 1 1 1.5e-13 5.5e-12 37.4 0.0 66 112 1 47 1 47 0.90 # 15494 # 16195 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.531 1_2 - 228 Sigma70_ECF PF07638.6 185 3e-06 18.5 0.0 1 1 2.4e-07 4.5e-06 17.9 0.0 142 178 155 193 143 198 0.82 # 1575 # 2258 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.335 1_32 - 87 Sigma70_ECF PF07638.6 185 7.7e-06 17.2 0.0 1 1 4.7e-07 8.7e-06 17.0 0.0 138 169 20 51 6 65 0.79 # 23654 # 23914 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.314 1_3 - 518 FtsA PF14450.1 120 0.012 7.0 11.8 1 2 0.00089 0.033 5.6 3.8 3 75 6 105 5 183 0.66 # 2374 # 3927 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.356 1_3 - 518 FtsA PF14450.1 120 0.012 7.0 11.8 2 2 0.001 0.037 5.4 0.7 2 43 271 322 270 361 0.79 # 2374 # 3927 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.356 1_2 - 228 HTH_Mga PF08280.6 59 9.4e-05 13.7 0.1 1 1 5.4e-06 0.0002 12.7 0.1 13 41 160 188 153 191 0.82 # 1575 # 2258 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.335 1_12 - 214 ArsA_ATPase PF02374.10 305 0.00037 11.1 0.1 1 1 1.4e-05 0.00053 10.5 0.1 8 36 8 36 1 40 0.82 # 9005 # 9646 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.555 1_12 - 214 AAA_31 PF13614.1 157 4.6e-05 14.9 0.1 1 1 3.3e-06 0.00012 13.5 0.0 2 40 2 40 1 51 0.86 # 9005 # 9646 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.555 1_36 - 315 Yae1_N PF09811.4 39 0.00014 12.9 0.6 1 1 1.4e-05 0.00026 12.0 0.6 15 30 269 284 265 292 0.88 # 25536 # 26480 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.504 1_8 - 227 Yae1_N PF09811.4 39 0.00064 10.8 4.7 1 1 0.00011 0.0019 9.3 4.7 5 30 164 189 162 195 0.84 # 7539 # 8219 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.463 1_14 - 174 SSB PF00436.20 104 2.2e-13 41.6 0.0 1 1 8e-15 3e-13 41.1 0.0 7 101 17 108 14 111 0.94 # 10140 # 10661 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.573 1_25 - 207 HTH_21 PF13276.1 60 3.9e-06 18.4 2.8 1 2 3.1e-07 1.2e-05 16.9 0.4 38 57 2 21 1 24 0.90 # 19385 # 20005 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 1_25 - 207 HTH_21 PF13276.1 60 3.9e-06 18.4 2.8 2 2 0.02 0.75 1.5 0.1 10 25 177 194 168 203 0.77 # 19385 # 20005 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.509 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/7ba49261-eb03-4430-b9cd-546aa9f7ad49 # Target file: checkm_output/bins/pm1948/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1948/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/7ba49261-eb03-4430-b9cd-546aa9f7ad49 checkm_output/bins/pm1948/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:56:10 2017 # [ok]