# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_13 - 588 Peptidase_M66 PF10462.4 305 1.2e-06 17.6 0.4 1 1 1.7e-07 2.2e-06 16.7 0.4 194 222 508 533 469 539 0.63 # 9050 # 10813 # -1 # ID=1_13;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.420 1_13 - 588 Peptidase_M10 PF00413.19 154 8.7e-06 15.6 0.9 1 1 4.3e-06 5.6e-05 12.9 1.0 106 127 508 529 377 539 0.68 # 9050 # 10813 # -1 # ID=1_13;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.420 1_3 - 92 Glyco_trans_4_2 PF13477.1 139 7.2e-05 12.7 0.0 1 1 5.5e-06 7.2e-05 12.7 0.0 76 102 46 72 2 88 0.79 # 1858 # 2133 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.493 1_13 - 588 Reprolysin_5 PF13688.1 196 1.1e-09 28.5 0.0 1 1 1.7e-10 2.3e-09 27.5 0.0 4 172 391 538 388 557 0.72 # 9050 # 10813 # -1 # ID=1_13;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.420 1_2 - 174 RepL PF05732.6 165 3.7e-09 26.0 0.9 1 1 3.8e-10 5e-09 25.6 0.9 13 132 34 164 21 170 0.76 # 1219 # 1740 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.328 1_13 - 588 Reprolysin_4 PF13583.1 206 8.4e-10 28.5 0.0 1 1 1.4e-10 1.8e-09 27.4 0.0 7 170 394 534 387 556 0.76 # 9050 # 10813 # -1 # ID=1_13;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.420 1_13 - 588 Reprolysin PF01421.14 199 2.1e-06 17.4 0.5 1 1 8.8e-07 1.1e-05 15.0 0.5 4 151 393 527 391 550 0.68 # 9050 # 10813 # -1 # ID=1_13;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.420 1_13 - 588 Reprolysin_2 PF13574.1 174 1.9e-08 24.5 0.1 1 1 4.2e-09 5.4e-08 23.1 0.1 5 156 412 548 408 556 0.79 # 9050 # 10813 # -1 # ID=1_13;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.420 1_13 - 588 Peptidase_M11 PF05548.6 314 9e-06 14.7 0.8 1 3 0.023 0.3 -0.1 0.0 213 259 138 180 134 193 0.67 # 9050 # 10813 # -1 # ID=1_13;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.420 1_13 - 588 Peptidase_M11 PF05548.6 314 9e-06 14.7 0.8 2 3 0.068 0.88 -1.7 0.1 209 242 228 261 221 272 0.73 # 9050 # 10813 # -1 # ID=1_13;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.420 1_13 - 588 Peptidase_M11 PF05548.6 314 9e-06 14.7 0.8 3 3 6.9e-07 9e-06 14.7 0.8 130 184 487 545 483 556 0.73 # 9050 # 10813 # -1 # ID=1_13;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.420 1_13 - 588 Reprolysin_3 PF13582.1 124 1.7e-18 57.4 0.0 1 1 2.7e-19 3.5e-18 56.4 0.0 3 123 414 523 412 524 0.87 # 9050 # 10813 # -1 # ID=1_13;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.420 1_13 - 588 Astacin PF01400.19 191 3.2e-05 13.4 0.1 1 1 4.7e-06 6.1e-05 12.5 0.1 49 96 477 524 440 539 0.78 # 9050 # 10813 # -1 # ID=1_13;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.420 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/7571b8eb-9620-4a8a-be8a-4d4cefc4fae1 # Target file: checkm_output/bins/pm1945/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1945/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/7571b8eb-9620-4a8a-be8a-4d4cefc4fae1 checkm_output/bins/pm1945/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:56:07 2017 # [ok]