# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_1 - 161 RepL PF05732.6 165 1.9e-06 15.5 0.0 1 2 0.05 0.2 -0.8 1.0 131 151 33 51 26 65 0.58 # 3 # 485 # -1 # ID=1_1;partial=10;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.377 1_1 - 161 RepL PF05732.6 165 1.9e-06 15.5 0.0 2 2 2.5e-06 1e-05 13.2 0.0 49 123 79 160 68 161 0.78 # 3 # 485 # -1 # ID=1_1;partial=10;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.377 1_1 - 161 HTH_36 PF13730.1 55 1.3e-05 13.8 0.0 1 1 5.1e-06 2.1e-05 13.1 0.0 6 55 89 139 88 139 0.79 # 3 # 485 # -1 # ID=1_1;partial=10;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.377 1_1 - 161 HTH_11 PF08279.7 55 4.1e-07 18.1 0.0 1 1 1.9e-07 7.4e-07 17.2 0.0 19 46 113 140 112 146 0.88 # 3 # 485 # -1 # ID=1_1;partial=10;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.377 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/32e89b41-cf76-41c8-ab0f-4cf2d3b63cb9 # Target file: checkm_output/bins/pm1940/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1940/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/32e89b41-cf76-41c8-ab0f-4cf2d3b63cb9 checkm_output/bins/pm1940/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:55:56 2017 # [ok]