# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 2_5 - 492 ATP-synt_ab PF00006.20 215 1.3e-05 17.0 0.1 1 2 0.089 2.9 -0.4 0.0 17 34 32 49 28 55 0.88 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 ATP-synt_ab PF00006.20 215 1.3e-05 17.0 0.1 2 2 3e-06 9.8e-05 14.2 0.1 7 66 314 380 307 402 0.80 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_17 - 332 ATP-synt_ab PF00006.20 215 0.00035 12.4 0.0 1 1 1.8e-05 0.00057 11.7 0.0 16 62 159 205 151 247 0.86 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_17 - 332 KaiC PF06745.8 227 0.00011 13.6 0.0 1 1 3e-06 0.0002 12.8 0.0 16 53 155 190 148 240 0.77 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_5 - 492 ABC_tran PF00005.22 137 2.2e-31 101.3 8.0 1 3 1.7e-09 3.7e-08 26.1 0.1 5 37 24 56 20 66 0.85 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 ABC_tran PF00005.22 137 2.2e-31 101.3 8.0 2 3 3.1e-07 6.8e-06 18.7 0.0 101 137 94 128 73 128 0.79 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 ABC_tran PF00005.22 137 2.2e-31 101.3 8.0 3 3 9.5e-19 2.1e-17 56.0 0.1 2 136 313 436 312 437 0.81 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_17 - 332 ABC_tran PF00005.22 137 1e-06 21.4 0.0 1 1 7.4e-08 1.6e-06 20.8 0.0 6 45 153 192 150 257 0.87 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_10 - 867 ABC_tran PF00005.22 137 0.00044 12.9 0.0 1 1 6.8e-05 0.0015 11.2 0.0 14 38 494 518 481 550 0.83 # 4161 # 6761 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.497 4_3 - 199 HTH_22 PF13309.1 64 3.6e-06 19.0 0.1 1 1 1.6e-07 1e-05 17.6 0.1 45 62 168 185 166 187 0.92 # 533 # 1129 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 2_5 - 492 DUF815 PF05673.8 250 1.6e-05 16.2 0.2 1 2 0.00013 0.0082 7.3 0.0 58 77 35 54 27 63 0.85 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 DUF815 PF05673.8 250 1.6e-05 16.2 0.2 2 2 0.00031 0.02 6.0 0.0 55 76 324 345 315 351 0.85 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_34 - 422 HHH_5 PF14520.1 60 1.8e-07 23.6 0.6 1 1 7.4e-08 4.8e-06 19.0 0.6 8 55 181 278 177 282 0.65 # 25388 # 26653 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.535 1_17 - 332 Sigma54_activat PF00158.21 168 5.5e-06 18.2 0.0 1 1 3.1e-07 1e-05 17.4 0.0 14 54 150 190 138 213 0.82 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_20 - 1079 Sigma54_activat PF00158.21 168 0.00011 14.0 0.4 1 1 9.6e-06 0.00031 12.5 0.4 8 130 480 600 473 606 0.79 # 14125 # 17361 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 1_17 - 332 FtsK_SpoIIIE PF01580.13 205 5.6e-07 21.5 0.0 1 1 5.1e-08 1.1e-06 20.5 0.0 38 64 158 184 139 191 0.81 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_10 - 867 FtsK_SpoIIIE PF01580.13 205 8.4e-06 17.7 0.0 1 1 8.1e-07 1.8e-05 16.6 0.0 21 62 462 515 445 522 0.82 # 4161 # 6761 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.497 1_21 - 510 FtsK_SpoIIIE PF01580.13 205 0.00042 12.1 0.0 1 1 3.4e-05 0.00074 11.3 0.0 39 59 124 147 95 153 0.78 # 17361 # 18890 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 4_3 - 199 SpoIIID PF12116.3 82 1.7e-05 17.0 0.1 1 2 0.01 0.66 2.3 0.0 33 55 8 30 5 44 0.87 # 533 # 1129 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 4_3 - 199 SpoIIID PF12116.3 82 1.7e-05 17.0 0.1 2 2 8.2e-06 0.00053 12.2 0.0 17 42 163 188 151 197 0.84 # 533 # 1129 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 1_17 - 332 MobB PF03205.9 140 5.7e-06 18.4 1.9 1 1 3e-07 9.7e-06 17.6 0.3 2 39 160 196 159 201 0.83 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_5 - 492 MobB PF03205.9 140 3.2e-05 16.0 0.4 1 2 0.0031 0.099 4.7 0.0 2 20 32 50 31 61 0.86 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 MobB PF03205.9 140 3.2e-05 16.0 0.4 2 2 0.00015 0.0049 8.9 0.1 3 23 325 345 323 353 0.87 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_8 - 258 FmrO PF07091.6 251 2.7e-85 277.6 0.0 1 1 4.7e-87 3e-85 277.4 0.0 1 251 12 251 12 251 0.99 # 6578 # 7351 # -1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 2_2 - 181 UvrD-helicase PF00580.16 315 9.3e-05 14.1 3.8 1 1 1.7e-06 0.00011 13.9 3.8 127 229 52 155 10 161 0.72 # 961 # 1503 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.378 2_5 - 492 DUF3584 PF12128.3 1201 0.0047 6.5 13.2 1 3 0.002 0.13 1.7 0.0 13 36 26 49 22 50 0.84 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 DUF3584 PF12128.3 1201 0.0047 6.5 13.2 2 3 0.0047 0.3 0.5 7.1 629 703 191 268 173 301 0.38 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 DUF3584 PF12128.3 1201 0.0047 6.5 13.2 3 3 8.7e-05 0.0056 6.2 0.3 19 37 324 342 318 343 0.88 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_17 - 332 Myosin_head PF00063.16 689 0.0001 12.7 0.0 1 1 2.2e-06 0.00014 12.2 0.0 84 110 157 183 147 209 0.90 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 4_3 - 199 TetR_N PF00440.18 47 0.00017 13.5 0.0 1 1 1.1e-05 0.00034 12.6 0.0 17 36 166 185 164 185 0.94 # 533 # 1129 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 2_2 - 181 TetR_N PF00440.18 47 0.00054 12.0 0.1 1 1 3.8e-05 0.0012 10.8 0.1 15 36 2 23 1 23 0.94 # 961 # 1503 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.378 2_5 - 492 AAA_19 PF13245.1 76 0.00011 14.3 0.1 1 1 2.2e-05 0.00048 12.2 0.0 10 48 323 360 317 370 0.75 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_17 - 332 AAA_19 PF13245.1 76 0.00041 12.4 0.1 1 1 4.2e-05 0.00091 11.3 0.1 5 48 153 191 149 224 0.78 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_20 - 1079 AAA_19 PF13245.1 76 0.0015 10.6 3.7 1 2 0.00084 0.018 7.2 0.2 2 75 485 551 484 552 0.75 # 14125 # 17361 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 1_20 - 1079 AAA_19 PF13245.1 76 0.0015 10.6 3.7 2 2 0.041 0.89 1.7 0.0 17 32 706 721 705 731 0.82 # 14125 # 17361 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 1_24 - 239 CbiA PF01656.18 195 1.8e-06 19.8 0.7 1 2 0.00041 0.027 6.1 0.1 1 19 3 21 3 24 0.89 # 20249 # 20965 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.416 1_24 - 239 CbiA PF01656.18 195 1.8e-06 19.8 0.7 2 2 6.6e-06 0.00043 12.0 0.0 110 165 89 142 33 168 0.77 # 20249 # 20965 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.416 2_5 - 492 PRK PF00485.13 194 0.00019 13.3 0.2 1 2 0.0023 0.15 3.8 0.0 2 21 33 52 32 85 0.83 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 PRK PF00485.13 194 0.00019 13.3 0.2 2 2 0.00027 0.017 6.9 0.0 2 33 325 364 325 409 0.75 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_37 - 240 Rep_3 PF01051.16 222 2.8e-44 143.6 0.4 1 1 1e-45 3.3e-44 143.4 0.4 2 213 8 227 7 233 0.92 # 28509 # 29228 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.440 2_1 - 276 Rep_3 PF01051.16 222 4.8e-42 136.3 1.0 1 1 1.5e-43 4.8e-42 136.3 1.0 44 222 14 192 3 192 0.94 # 67 # 894 # 1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.353 7_1 - 235 rve PF00665.21 120 2.1e-13 42.7 0.1 1 2 0.03 0.97 1.9 0.0 78 102 27 49 6 54 0.84 # 53 # 757 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 7_1 - 235 rve PF00665.21 120 2.1e-13 42.7 0.1 2 2 1.2e-13 3.9e-12 38.7 0.0 9 119 75 182 70 183 0.89 # 53 # 757 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 2_9 - 279 rve PF00665.21 120 0.00043 12.7 0.0 1 1 2.5e-05 0.00081 11.8 0.0 4 96 86 186 84 199 0.76 # 7680 # 8516 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.581 2_10 - 514 zf-ribbon_3 PF13248.1 26 0.037 5.7 9.1 1 2 9.1e-05 0.0059 8.2 0.9 18 24 95 101 93 108 0.74 # 8753 # 10294 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.555 2_10 - 514 zf-ribbon_3 PF13248.1 26 0.037 5.7 9.1 2 2 0.0085 0.56 1.9 0.1 18 23 449 454 446 457 0.83 # 8753 # 10294 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.555 2_5 - 492 AAA_23 PF13476.1 202 3.2e-08 26.4 8.6 1 3 0.00011 0.0025 10.4 0.0 24 38 35 49 25 57 0.91 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 AAA_23 PF13476.1 202 3.2e-08 26.4 8.6 2 3 0.0098 0.21 4.1 1.4 141 177 187 244 105 280 0.58 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 AAA_23 PF13476.1 202 3.2e-08 26.4 8.6 3 3 5.7e-06 0.00012 14.7 0.4 22 39 325 342 288 343 0.76 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_17 - 332 AAA_23 PF13476.1 202 0.00029 13.5 0.0 1 1 2.2e-05 0.00047 12.8 0.0 19 39 158 178 105 184 0.91 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_10 - 867 AAA_23 PF13476.1 202 0.0011 11.6 3.6 1 2 0.071 1.5 1.3 0.2 137 177 132 188 17 240 0.62 # 4161 # 6761 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.497 1_10 - 867 AAA_23 PF13476.1 202 0.0011 11.6 3.6 2 2 0.00014 0.0031 10.1 0.0 22 39 494 511 464 521 0.84 # 4161 # 6761 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.497 2_5 - 492 AAA_24 PF13479.1 213 2.4e-05 16.2 3.2 1 2 0.00068 0.044 5.6 0.0 8 38 35 64 30 111 0.76 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 AAA_24 PF13479.1 213 2.4e-05 16.2 3.2 2 2 2.2e-05 0.0014 10.5 0.1 4 23 323 342 321 356 0.86 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_17 - 332 Zeta_toxin PF06414.7 201 1e-06 20.3 0.0 1 1 5.4e-08 1.7e-06 19.5 0.0 12 51 154 193 145 204 0.86 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_5 - 492 Zeta_toxin PF06414.7 201 3.3e-05 15.3 1.5 1 2 0.00049 0.016 6.6 0.0 21 40 35 54 30 63 0.87 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 Zeta_toxin PF06414.7 201 3.3e-05 15.3 1.5 2 2 0.00035 0.011 7.0 0.0 20 40 326 346 309 353 0.83 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_8 - 258 TehB PF03848.9 192 0.0005 11.5 2.3 1 1 3.7e-06 0.00024 12.6 0.2 32 112 108 190 66 207 0.86 # 6578 # 7351 # -1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 1_20 - 1079 AAA_30 PF13604.1 196 1.4e-53 173.7 7.6 1 1 2.3e-54 5e-53 171.9 6.4 1 192 477 660 477 663 0.97 # 14125 # 17361 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 2_5 - 492 AAA_30 PF13604.1 196 2.1e-05 16.5 1.7 1 2 0.0066 0.14 4.0 0.0 18 39 31 51 25 61 0.81 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 AAA_30 PF13604.1 196 2.1e-05 16.5 1.7 2 2 7.1e-05 0.0015 10.4 0.0 21 133 325 467 321 469 0.59 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_17 - 332 AAA_30 PF13604.1 196 9.9e-05 14.3 0.1 1 2 7.1e-05 0.0015 10.4 0.1 11 51 151 190 145 197 0.80 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_17 - 332 AAA_30 PF13604.1 196 9.9e-05 14.3 0.1 2 2 0.035 0.77 1.6 0.0 121 178 204 258 191 272 0.77 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_5 - 492 SMC_N PF02463.14 220 1.4e-10 33.0 6.8 1 4 0.00018 0.012 7.1 0.0 29 43 35 49 25 65 0.86 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 SMC_N PF02463.14 220 1.4e-10 33.0 6.8 2 4 0.00018 0.012 7.2 0.0 116 203 79 160 70 173 0.81 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 SMC_N PF02463.14 220 1.4e-10 33.0 6.8 3 4 0.00011 0.0072 7.8 0.1 27 44 325 342 311 344 0.80 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 SMC_N PF02463.14 220 1.4e-10 33.0 6.8 4 4 7.9e-06 0.00051 11.6 0.2 117 211 382 478 359 485 0.81 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 7_1 - 235 HTH_Tnp_1 PF01527.15 76 0.00016 13.9 0.3 1 1 5.4e-06 0.00035 12.9 0.3 4 51 6 58 4 63 0.79 # 53 # 757 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_21 - 510 TraG-D_C PF12696.2 128 8.8e-22 69.7 0.0 1 1 2.2e-23 1.4e-21 69.0 0.0 1 127 350 471 350 472 0.80 # 17361 # 18890 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 7_1 - 235 DDE_3 PF13358.1 146 0.00045 12.3 0.0 1 1 2.1e-05 0.0014 10.7 0.0 32 90 82 141 59 146 0.87 # 53 # 757 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 2_9 - 279 DDE_Tnp_1 PF01609.16 213 1.3e-24 79.2 0.1 1 1 5.5e-26 1.8e-24 78.7 0.1 6 205 90 257 87 264 0.91 # 7680 # 8516 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.581 2_6 - 392 DDE_Tnp_1 PF01609.16 213 6.9e-16 50.7 0.2 1 1 3e-17 9.8e-16 50.2 0.2 63 211 142 315 91 317 0.78 # 4675 # 5850 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 2_9 - 279 DDE_Tnp_1_2 PF13586.1 88 4.8e-05 15.9 1.0 1 1 1.6e-06 0.0001 14.8 0.0 1 32 163 194 163 211 0.89 # 7680 # 8516 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.581 2_5 - 492 AAA_21 PF13304.1 303 1.2e-18 60.3 5.1 1 4 3.9e-07 2.6e-05 16.6 0.6 3 21 34 52 33 85 0.87 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 AAA_21 PF13304.1 303 1.2e-18 60.3 5.1 2 4 0.00027 0.018 7.2 0.0 237 303 100 160 91 160 0.84 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 AAA_21 PF13304.1 303 1.2e-18 60.3 5.1 3 4 4.9e-07 3.2e-05 16.2 0.0 3 43 326 361 325 384 0.76 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 AAA_21 PF13304.1 303 1.2e-18 60.3 5.1 4 4 6.8e-08 4.4e-06 19.1 0.0 233 301 405 467 386 469 0.89 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_3 - 199 Sigma70_r4 PF04545.11 50 0.00033 12.3 0.0 1 1 1.8e-05 0.0012 10.5 0.0 19 37 164 182 154 189 0.88 # 533 # 1129 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 1_20 - 1079 AAA PF00004.24 132 2.2e-06 20.3 0.9 1 1 2.6e-07 8.4e-06 18.3 0.1 4 111 500 600 497 612 0.73 # 14125 # 17361 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 2_5 - 492 AAA PF00004.24 132 2.6e-05 16.7 0.1 1 2 0.011 0.37 3.3 0.0 3 22 35 54 33 124 0.77 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 AAA PF00004.24 132 2.6e-05 16.7 0.1 2 2 6.4e-05 0.0021 10.6 0.0 3 23 327 347 325 437 0.75 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_17 - 332 Parvo_NS1 PF01057.12 272 0.00056 11.1 0.0 1 1 1.4e-05 0.00093 10.4 0.0 104 138 148 182 140 188 0.90 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_20 - 1079 Herpes_Helicase PF02689.9 819 1.4e-05 15.3 0.0 1 2 0.0014 0.089 2.7 0.0 173 208 539 574 515 584 0.81 # 14125 # 17361 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 1_20 - 1079 Herpes_Helicase PF02689.9 819 1.4e-05 15.3 0.0 2 2 9.3e-06 0.0006 9.9 0.0 739 782 850 894 831 914 0.80 # 14125 # 17361 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 4_3 - 199 MRP-L20 PF12824.2 164 1.4e-06 20.7 0.0 1 1 2.9e-08 1.9e-06 20.2 0.0 69 133 132 194 116 198 0.77 # 533 # 1129 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 1_20 - 1079 Torsin PF06309.6 127 3.5e-05 16.0 0.0 1 1 1.6e-06 0.0001 14.5 0.0 19 85 460 526 452 537 0.82 # 14125 # 17361 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 4_3 - 199 MerR_1 PF13411.1 69 6.1e-06 18.3 0.1 1 2 0.0073 0.48 2.6 0.0 45 66 78 99 75 102 0.83 # 533 # 1129 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 4_3 - 199 MerR_1 PF13411.1 69 6.1e-06 18.3 0.1 2 2 4.4e-06 0.00029 13.0 0.0 1 29 166 194 166 198 0.88 # 533 # 1129 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 1_17 - 332 cobW PF02492.14 178 1.4e-06 20.1 0.0 1 1 8.2e-08 2.7e-06 19.2 0.0 3 45 161 202 159 257 0.77 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_5 - 492 cobW PF02492.14 178 0.00017 13.3 1.3 1 2 0.01 0.33 2.6 0.0 3 19 33 49 31 59 0.87 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 cobW PF02492.14 178 0.00017 13.3 1.3 2 2 0.00012 0.004 8.9 0.3 3 28 325 349 323 352 0.80 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_17 - 332 AAA_16 PF13191.1 185 4.4e-07 22.3 0.0 1 1 3.4e-08 1.1e-06 21.0 0.0 24 61 158 195 149 274 0.82 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_5 - 492 AAA_16 PF13191.1 185 6.3e-06 18.6 0.1 1 2 0.00079 0.026 6.8 0.0 29 44 35 50 22 151 0.89 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 AAA_16 PF13191.1 185 6.3e-06 18.6 0.1 2 2 0.00014 0.0046 9.2 0.0 27 49 325 347 320 410 0.84 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 AAA_22 PF13401.1 131 1.1e-08 27.6 0.8 1 2 0.01 0.16 4.4 0.0 9 25 35 51 30 144 0.78 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 AAA_22 PF13401.1 131 1.1e-08 27.6 0.8 2 2 8.2e-08 1.3e-06 20.9 0.0 7 125 325 464 322 471 0.86 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_17 - 332 AAA_22 PF13401.1 131 1.8e-07 23.7 0.0 1 1 2.4e-08 4e-07 22.6 0.0 3 54 157 202 153 241 0.74 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_10 - 867 AAA_22 PF13401.1 131 6.3e-05 15.4 0.0 1 1 0.0001 0.0016 10.9 0.0 5 28 492 515 489 549 0.85 # 4161 # 6761 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.497 1_20 - 1079 AAA_22 PF13401.1 131 0.0004 12.8 0.2 1 1 0.00029 0.0046 9.4 0.2 4 125 494 598 488 603 0.81 # 14125 # 17361 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 2_5 - 492 AAA_29 PF13555.1 62 2.8e-08 25.5 0.5 1 2 1.9e-05 0.00062 11.6 0.0 25 40 32 47 20 52 0.78 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 AAA_29 PF13555.1 62 2.8e-08 25.5 0.5 2 2 2.2e-05 0.00071 11.4 0.1 14 40 314 339 310 343 0.77 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_17 - 332 AAA_29 PF13555.1 62 0.00065 11.6 0.0 1 1 4.7e-05 0.0015 10.4 0.0 19 43 157 178 145 188 0.75 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_5 - 492 AAA_28 PF13521.1 163 2.5e-05 16.6 4.3 1 2 0.023 1.5 1.0 0.0 2 20 33 51 32 66 0.84 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 AAA_28 PF13521.1 163 2.5e-05 16.6 4.3 2 2 5.6e-07 3.7e-05 16.0 0.1 1 34 324 359 324 391 0.79 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 7_1 - 235 HTH_32 PF13565.1 77 8.4e-07 22.1 0.2 1 1 1.1e-07 3.7e-06 20.0 0.0 26 76 5 50 2 51 0.83 # 53 # 757 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 4_3 - 199 HTH_32 PF13565.1 77 1.7e-05 17.9 0.2 1 1 3e-06 9.9e-05 15.5 0.1 7 76 127 185 121 186 0.71 # 533 # 1129 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 2_10 - 514 A2L_zn_ribbon PF08792.5 33 0.0043 8.9 4.7 1 2 0.00018 0.012 7.5 0.6 5 29 76 101 74 102 0.90 # 8753 # 10294 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.555 2_10 - 514 A2L_zn_ribbon PF08792.5 33 0.0043 8.9 4.7 2 2 0.0078 0.51 2.3 0.3 20 28 446 454 444 457 0.62 # 8753 # 10294 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.555 4_3 - 199 HTH_23 PF13384.1 50 3.7e-06 18.9 0.0 1 1 4.6e-07 1.5e-05 16.9 0.0 10 37 158 185 150 188 0.82 # 533 # 1129 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 7_1 - 235 HTH_23 PF13384.1 50 3.9e-06 18.8 0.7 1 2 0.032 1 1.6 0.0 7 27 11 35 7 36 0.69 # 53 # 757 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 7_1 - 235 HTH_23 PF13384.1 50 3.9e-06 18.8 0.7 2 2 3.7e-06 0.00012 14.0 0.1 28 42 41 55 40 62 0.87 # 53 # 757 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 4_3 - 199 HTH_7 PF02796.10 45 3.8e-18 57.5 0.1 1 1 2.1e-19 1.4e-17 55.7 0.0 1 44 144 188 144 189 0.98 # 533 # 1129 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 2_10 - 514 Ribosomal_S27e PF01667.12 55 5.6e-05 15.0 0.8 1 1 8.6e-07 5.6e-05 15.0 0.8 5 33 72 100 69 105 0.90 # 8753 # 10294 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.555 2_10 - 514 zinc_ribbon_4 PF13717.1 36 0.0037 9.3 4.0 1 2 0.00044 0.028 6.5 0.1 1 12 73 84 73 87 0.82 # 8753 # 10294 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.555 2_10 - 514 zinc_ribbon_4 PF13717.1 36 0.0037 9.3 4.0 2 2 0.0063 0.41 2.8 0.0 5 14 96 105 95 113 0.81 # 8753 # 10294 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.555 4_3 - 199 HTH_29 PF13551.1 112 0.00029 13.3 2.2 1 1 0.00023 0.0073 8.8 0.0 5 33 159 186 155 192 0.80 # 533 # 1129 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 2_2 - 181 HTH_29 PF13551.1 112 0.00037 13.0 0.0 1 1 2.9e-05 0.00095 11.7 0.0 12 47 4 39 1 91 0.86 # 961 # 1503 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.378 2_5 - 492 ABC_tran_2 PF12848.2 85 4.1e-14 44.6 16.1 1 1 2e-14 1.3e-12 39.8 16.1 1 85 167 283 167 283 0.93 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_31 - 140 Ribosomal_S6 PF01250.12 92 0.00038 12.6 0.1 1 2 0.00053 0.034 6.4 0.0 39 88 43 93 32 97 0.81 # 23645 # 24064 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.488 1_31 - 140 Ribosomal_S6 PF01250.12 92 0.00038 12.6 0.1 2 2 0.0018 0.12 4.6 0.0 11 40 104 133 94 138 0.89 # 23645 # 24064 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.488 7_1 - 235 DDE_Tnp_IS66 PF03050.9 271 1.5e-12 39.5 0.3 1 1 3e-14 1.9e-12 39.2 0.3 5 132 10 144 6 174 0.87 # 53 # 757 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 2_2 - 181 IF2_N PF04760.10 54 8e-05 14.6 1.1 1 1 4.3e-06 0.00028 12.9 0.0 1 40 1 38 1 48 0.75 # 961 # 1503 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.378 2_9 - 279 DDE_Tnp_1_7 PF13843.1 351 0.00022 12.6 0.0 1 1 4.2e-06 0.00027 12.3 0.0 148 262 111 219 85 258 0.77 # 7680 # 8516 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.581 2_8 - 258 Methyltransf_31 PF13847.1 152 0.0002 13.2 0.2 1 2 0.093 6.1 -1.3 0.0 95 98 39 42 7 89 0.58 # 6578 # 7351 # -1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 2_8 - 258 Methyltransf_31 PF13847.1 152 0.0002 13.2 0.2 2 2 8.4e-06 0.00054 11.9 0.0 5 83 108 182 104 231 0.78 # 6578 # 7351 # -1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 1_17 - 332 Arch_ATPase PF01637.13 234 5.7e-06 18.4 0.0 1 1 3.2e-07 1.1e-05 17.6 0.0 15 68 155 205 149 226 0.87 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_5 - 492 Arch_ATPase PF01637.13 234 6.8e-05 14.9 3.0 1 3 0.039 1.3 0.9 0.0 25 40 35 50 24 85 0.87 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 Arch_ATPase PF01637.13 234 6.8e-05 14.9 3.0 2 3 0.017 0.54 2.1 0.7 53 104 181 237 166 267 0.65 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 Arch_ATPase PF01637.13 234 6.8e-05 14.9 3.0 3 3 6.5e-05 0.0021 10.0 0.0 24 68 326 374 323 473 0.69 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_20 - 1079 PhoH PF02562.11 205 2.1e-09 29.2 4.8 1 2 9.6e-07 3.1e-05 15.5 0.4 5 39 478 514 475 536 0.80 # 14125 # 17361 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 1_20 - 1079 PhoH PF02562.11 205 2.1e-09 29.2 4.8 2 2 3e-06 9.8e-05 13.9 0.1 120 162 562 605 553 635 0.82 # 14125 # 17361 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 1_17 - 332 PhoH PF02562.11 205 0.0002 12.9 0.0 1 1 1.1e-05 0.00036 12.1 0.0 14 45 153 184 143 210 0.79 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_35 - 264 SprT-like PF10263.4 157 2.5e-37 120.2 0.0 1 1 5.3e-39 3.5e-37 119.8 0.0 1 150 12 236 12 262 0.92 # 26804 # 27595 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 1_17 - 332 ResIII PF04851.10 184 4e-06 19.0 0.0 1 1 9.8e-08 6.3e-06 18.4 0.0 22 61 148 196 104 202 0.81 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_21 - 510 TrwB_AAD_bind PF10412.4 386 6.8e-119 389.1 0.0 1 1 3.7e-120 8e-119 388.9 0.0 1 385 112 490 112 491 0.95 # 17361 # 18890 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 1_10 - 867 TrwB_AAD_bind PF10412.4 386 5.8e-07 20.6 1.6 1 2 1.5e-06 3.2e-05 14.9 0.0 16 51 492 527 484 536 0.92 # 4161 # 6761 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.497 1_10 - 867 TrwB_AAD_bind PF10412.4 386 5.8e-07 20.6 1.6 2 2 0.0042 0.091 3.5 0.0 102 168 741 806 720 812 0.79 # 4161 # 6761 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.497 1_17 - 332 TrwB_AAD_bind PF10412.4 386 8.9e-06 16.8 0.1 1 1 6.4e-07 1.4e-05 16.1 0.1 14 49 157 191 150 202 0.81 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_17 - 332 AAA_18 PF13238.1 129 3.1e-06 19.9 0.0 1 1 2.9e-07 6.3e-06 18.8 0.0 1 29 161 194 161 213 0.77 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_21 - 510 AAA_18 PF13238.1 129 8.4e-05 15.2 0.0 1 1 7.8e-06 0.00017 14.2 0.0 3 21 131 149 130 238 0.78 # 17361 # 18890 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 2_5 - 492 AAA_18 PF13238.1 129 0.00063 12.4 8.3 1 2 0.0046 0.1 5.3 0.0 1 21 33 53 33 89 0.81 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 AAA_18 PF13238.1 129 0.00063 12.4 8.3 2 2 0.0001 0.0022 10.6 0.6 1 23 325 354 325 475 0.80 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 TIGR00611 TIGR00611 365 0.00042 11.4 2.8 1 3 0.0032 0.21 2.6 0.0 27 41 34 48 20 55 0.82 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 TIGR00611 TIGR00611 365 0.00042 11.4 2.8 2 3 0.01 0.67 0.9 0.2 81 124 230 273 204 274 0.81 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 TIGR00611 TIGR00611 365 0.00042 11.4 2.8 3 3 0.0004 0.026 5.6 0.0 27 43 326 342 318 348 0.86 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_34 - 422 IMS_HHH PF11798.3 32 3e-07 22.6 0.0 1 1 1.4e-08 8.8e-07 21.2 0.0 4 32 171 199 168 199 0.85 # 25388 # 26653 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.535 1_17 - 332 GvpD PF07088.6 484 1.7e-06 18.9 0.0 1 1 3.9e-08 2.5e-06 18.3 0.0 10 89 158 241 150 262 0.76 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_8 - 258 Methyltransf_12 PF08242.7 99 3.6e-06 19.8 0.0 1 1 1.2e-07 7.5e-06 18.7 0.0 1 82 111 188 111 199 0.85 # 6578 # 7351 # -1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 2_5 - 492 DUF258 PF03193.11 161 5.1e-09 27.8 0.1 1 2 4e-07 1.3e-05 16.7 0.0 39 95 34 126 15 136 0.87 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 DUF258 PF03193.11 161 5.1e-09 27.8 0.1 2 2 0.00013 0.0042 8.6 0.0 38 67 325 352 302 391 0.77 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_17 - 332 DUF258 PF03193.11 161 7.2e-05 14.3 0.0 1 1 4.1e-06 0.00013 13.5 0.0 29 61 151 184 129 224 0.81 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_21 - 510 DUF87 PF01935.12 229 7.2e-08 24.8 0.0 1 1 5.1e-09 1.1e-07 24.2 0.0 10 68 116 170 109 262 0.85 # 17361 # 18890 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 1_17 - 332 DUF87 PF01935.12 229 1.7e-06 20.3 0.0 1 1 1.5e-07 3.1e-06 19.4 0.0 9 61 144 195 138 196 0.78 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_5 - 492 DUF87 PF01935.12 229 0.0089 8.1 11.6 1 3 0.0038 0.083 4.9 0.0 25 48 32 55 20 62 0.86 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 DUF87 PF01935.12 229 0.0089 8.1 11.6 2 3 0.003 0.064 5.3 0.3 25 46 324 345 321 357 0.88 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 DUF87 PF01935.12 229 0.0089 8.1 11.6 3 3 0.027 0.57 2.2 0.1 40 196 415 472 368 486 0.56 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 4_3 - 199 HTH_28 PF13518.1 52 2.5e-05 16.6 0.0 1 1 6.7e-06 0.00014 14.1 0.0 13 32 166 185 158 191 0.87 # 533 # 1129 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 7_1 - 235 HTH_28 PF13518.1 52 3.8e-05 16.0 1.2 1 1 7.6e-06 0.00016 14.0 1.2 22 36 40 54 13 55 0.76 # 53 # 757 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 2_2 - 181 HTH_28 PF13518.1 52 5.9e-05 15.4 0.0 1 1 4.6e-06 0.0001 14.7 0.0 14 46 5 38 1 44 0.85 # 961 # 1503 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.378 4_3 - 199 HTH_24 PF13412.1 48 2.8e-05 15.8 0.0 1 2 0.032 2.1 0.2 0.0 30 46 74 90 69 104 0.81 # 533 # 1129 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 4_3 - 199 HTH_24 PF13412.1 48 2.8e-05 15.8 0.0 2 2 4.4e-06 0.00029 12.6 0.0 10 38 158 186 157 188 0.92 # 533 # 1129 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 1_17 - 332 Sigma54_activ_2 PF14532.1 138 1.6e-06 20.6 0.0 1 1 5e-08 3.3e-06 19.5 0.0 14 65 151 202 145 212 0.92 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_5 - 492 MMR_HSR1 PF01926.18 116 1.2e-06 20.8 4.1 1 2 4.3e-05 0.0014 10.9 0.1 1 27 32 92 32 178 0.52 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 MMR_HSR1 PF01926.18 116 1.2e-06 20.8 4.1 2 2 9.8e-05 0.0032 9.8 0.7 1 99 324 473 324 488 0.56 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_17 - 332 MMR_HSR1 PF01926.18 116 0.00028 13.2 0.0 1 1 1.4e-05 0.00046 12.5 0.0 2 41 161 205 160 310 0.84 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_17 - 332 DEAD PF00270.24 169 1.9e-06 19.7 0.0 1 1 5.7e-08 3.7e-06 18.8 0.0 13 70 157 211 144 242 0.78 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_5 - 492 Miro PF08477.8 119 2.4e-09 30.0 1.0 1 2 5.7e-06 0.00037 13.3 0.0 1 21 32 52 32 82 0.89 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 Miro PF08477.8 119 2.4e-09 30.0 1.0 2 2 3.4e-06 0.00022 14.0 0.0 1 25 324 348 324 392 0.72 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_17 - 332 DUF2075 PF09848.4 352 5.9e-05 14.4 0.0 1 1 1.3e-06 8.4e-05 13.9 0.0 1 32 158 187 158 216 0.76 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_20 - 1079 UvrD_C_2 PF13538.1 104 1.7e-16 52.6 0.1 1 1 1e-17 6.8e-16 50.7 0.1 2 102 797 896 796 898 0.76 # 14125 # 17361 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 1_17 - 332 T2SE PF00437.15 272 2e-52 170.0 0.1 1 1 7.4e-54 2.4e-52 169.7 0.1 3 271 10 311 8 312 0.94 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_21 - 510 T2SE PF00437.15 272 0.00057 11.1 0.1 1 1 3.1e-05 0.001 10.3 0.1 130 149 128 147 103 160 0.84 # 17361 # 18890 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 2_5 - 492 NACHT PF05729.7 166 9.2e-07 20.9 0.1 1 2 0.00093 0.03 6.3 0.0 3 20 33 50 31 63 0.86 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 NACHT PF05729.7 166 9.2e-07 20.9 0.1 2 2 1.4e-05 0.00046 12.2 0.0 3 24 325 346 323 394 0.84 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_17 - 332 NACHT PF05729.7 166 5.8e-05 15.1 0.0 1 1 3.8e-06 0.00013 14.0 0.0 1 27 159 185 159 188 0.90 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_17 - 332 UPF0079 PF02367.12 123 4e-06 18.8 0.0 1 1 2.5e-07 8e-06 17.8 0.0 9 45 152 188 145 193 0.85 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_5 - 492 UPF0079 PF02367.12 123 0.00026 12.9 0.1 1 2 0.0035 0.11 4.4 0.0 18 36 33 51 26 60 0.85 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 UPF0079 PF02367.12 123 0.00026 12.9 0.1 2 2 0.0013 0.041 5.8 0.0 14 39 321 346 312 357 0.83 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 AAA_17 PF13207.1 121 5.9e-07 22.7 3.7 1 2 0.0092 0.15 5.2 0.4 1 20 32 51 32 195 0.85 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 AAA_17 PF13207.1 121 5.9e-07 22.7 3.7 2 2 1.2e-06 2e-05 17.8 0.1 1 52 324 379 324 486 0.80 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_10 - 867 AAA_17 PF13207.1 121 0.00024 14.2 1.2 1 1 0.0003 0.0049 10.0 0.0 3 21 495 513 494 565 0.80 # 4161 # 6761 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.497 1_17 - 332 AAA_17 PF13207.1 121 0.00026 14.1 0.1 1 1 3.8e-05 0.00062 12.9 0.1 2 40 161 195 160 229 0.75 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_21 - 510 AAA_17 PF13207.1 121 0.00036 13.7 0.1 1 1 9e-05 0.0015 11.7 0.0 4 42 131 191 129 260 0.58 # 17361 # 18890 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 1_17 - 332 AAA_7 PF12775.2 272 6.4e-05 14.4 0.0 1 1 2.3e-06 0.00015 13.2 0.0 25 64 150 189 139 209 0.86 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_10 - 514 DZR PF12773.2 50 0.0038 9.4 4.8 1 2 0.0017 0.11 4.8 3.4 1 20 77 101 64 109 0.61 # 8753 # 10294 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.555 2_10 - 514 DZR PF12773.2 50 0.0038 9.4 4.8 2 2 0.0053 0.35 3.1 0.0 13 23 448 458 441 487 0.75 # 8753 # 10294 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.555 2_5 - 492 TIGR02211 TIGR02211 221 1.3e-30 98.6 2.1 1 4 3.1e-07 2e-05 16.1 0.0 18 53 17 52 4 67 0.83 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 TIGR02211 TIGR02211 221 1.3e-30 98.6 2.1 2 4 2e-14 1.3e-12 39.7 0.0 124 220 85 175 68 176 0.81 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 TIGR02211 TIGR02211 221 1.3e-30 98.6 2.1 3 4 1.1e-05 0.00071 11.1 0.0 19 52 310 343 305 358 0.90 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 TIGR02211 TIGR02211 221 1.3e-30 98.6 2.1 4 4 5.5e-11 3.6e-09 28.4 0.0 124 219 390 483 373 485 0.82 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_4 - 79 ATPgrasp_YheCD PF14398.1 262 0.00021 12.4 0.1 1 1 3.3e-06 0.00021 12.4 0.1 206 237 20 55 3 73 0.68 # 2509 # 2745 # -1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.376 1_17 - 332 TIGR03346 TIGR03346 853 9.6e-05 12.8 0.0 1 1 2e-06 0.00013 12.3 0.0 598 641 161 204 149 238 0.89 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_5 - 492 AAA_25 PF13481.1 194 1.3e-05 17.0 0.0 1 3 0.0073 0.47 2.1 0.0 37 54 34 51 30 72 0.81 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 AAA_25 PF13481.1 194 1.3e-05 17.0 0.0 2 3 1.4e-05 0.00092 10.9 0.0 29 54 318 343 294 423 0.76 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 AAA_25 PF13481.1 194 1.3e-05 17.0 0.0 3 3 0.06 3.9 -0.9 0.0 168 188 443 463 425 466 0.89 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_20 - 1079 Viral_helicase1 PF01443.13 234 4.5e-15 48.0 5.4 1 2 2.3e-08 1.5e-06 20.2 0.0 3 104 499 605 497 654 0.74 # 14125 # 17361 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 1_20 - 1079 Viral_helicase1 PF01443.13 234 4.5e-15 48.0 5.4 2 2 3e-11 2e-09 29.6 0.5 157 234 818 899 774 899 0.74 # 14125 # 17361 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 2_5 - 492 AAA_15 PF13175.1 415 2.4e-10 32.2 1.2 1 3 6e-05 0.0039 8.5 0.0 26 54 34 58 5 119 0.80 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 AAA_15 PF13175.1 415 2.4e-10 32.2 1.2 2 3 6.4e-06 0.00042 11.7 0.0 26 90 326 383 300 417 0.60 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 AAA_15 PF13175.1 415 2.4e-10 32.2 1.2 3 3 3.8e-05 0.0025 9.1 0.1 352 414 415 467 393 476 0.75 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_17 - 332 Pox_A32 PF04665.7 241 6.5e-05 14.6 0.0 1 1 1.7e-06 0.00011 13.8 0.0 12 46 157 191 150 210 0.85 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_21 - 510 AAA_14 PF13173.1 128 8e-06 18.1 0.0 1 2 4.3e-06 0.00014 14.1 0.0 6 89 130 213 125 234 0.76 # 17361 # 18890 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 1_21 - 510 AAA_14 PF13173.1 128 8e-06 18.1 0.0 2 2 0.043 1.4 1.1 0.0 53 81 340 372 300 391 0.57 # 17361 # 18890 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 1_17 - 332 AAA_14 PF13173.1 128 0.00018 13.7 0.1 1 2 0.0044 0.14 4.3 0.0 64 96 135 165 98 166 0.69 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_17 - 332 AAA_14 PF13173.1 128 0.00018 13.7 0.1 2 2 6.3e-05 0.0021 10.3 0.0 2 35 158 191 157 213 0.80 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_17 - 332 AAA_33 PF13671.1 143 0.00024 13.3 0.0 1 1 1.2e-05 0.00038 12.6 0.0 2 26 161 188 160 256 0.81 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_5 - 492 AAA_33 PF13671.1 143 0.00043 12.5 0.1 1 2 0.017 0.55 2.4 0.0 4 19 35 50 33 121 0.83 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 AAA_33 PF13671.1 143 0.00043 12.5 0.1 2 2 0.00051 0.016 7.3 0.0 3 33 326 356 325 398 0.77 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 510 T4SS-DNA_transf PF02534.9 469 3.5e-12 37.8 0.0 1 1 7.9e-14 5.1e-12 37.3 0.0 263 426 313 472 297 500 0.74 # 17361 # 18890 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 2_8 - 258 MTS PF05175.9 170 2.5e-06 19.3 0.0 1 1 7.2e-08 4.7e-06 18.4 0.0 33 103 108 177 99 195 0.88 # 6578 # 7351 # -1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 1_17 - 332 RNA_helicase PF00910.17 107 1.3e-05 17.7 0.1 1 2 7e-06 0.00023 13.7 0.0 1 25 161 185 161 242 0.75 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_17 - 332 RNA_helicase PF00910.17 107 1.3e-05 17.7 0.1 2 2 0.054 1.8 1.2 0.1 69 100 290 322 281 328 0.78 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_5 - 492 RNA_helicase PF00910.17 107 0.00043 12.8 0.2 1 2 0.0066 0.21 4.1 0.0 3 22 35 54 33 65 0.83 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 RNA_helicase PF00910.17 107 0.00043 12.8 0.2 2 2 0.0018 0.06 5.9 0.0 2 22 326 346 325 380 0.79 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_17 - 332 AAA_2 PF07724.9 171 3.7e-06 19.2 0.0 1 1 1e-07 6.7e-06 18.4 0.0 3 54 158 204 156 216 0.89 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_8 - 258 Methyltransf_23 PF13489.1 161 5.3e-06 18.5 0.0 1 1 1.2e-07 7.6e-06 18.0 0.0 9 93 93 187 85 237 0.73 # 6578 # 7351 # -1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 2_5 - 492 NTPase_1 PF03266.10 168 5.4e-05 15.2 2.1 1 2 0.044 2.8 -0.1 0.0 1 19 32 50 32 62 0.83 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 NTPase_1 PF03266.10 168 5.4e-05 15.2 2.1 2 2 1.7e-05 0.0011 11.0 1.0 1 26 324 349 324 490 0.62 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 3_3 - 478 DNA_methylase PF00145.12 335 1.4e-79 259.8 0.0 1 1 4.4e-81 2.9e-79 258.8 0.0 1 331 96 457 96 460 0.86 # 1364 # 2797 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.481 2_10 - 514 zinc_ribbon_5 PF13719.1 37 0.0029 9.6 3.9 1 2 0.0004 0.026 6.5 0.1 1 12 73 84 73 87 0.82 # 8753 # 10294 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.555 2_10 - 514 zinc_ribbon_5 PF13719.1 37 0.0029 9.6 3.9 2 2 0.0051 0.33 3.0 0.0 5 14 96 105 95 113 0.81 # 8753 # 10294 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.555 7_1 - 235 DDE_Tnp_IS240 PF13610.1 140 4.9e-53 171.2 0.0 1 1 1.1e-54 6.9e-53 170.7 0.0 4 139 75 212 73 213 0.99 # 53 # 757 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 2_5 - 492 PduV-EutP PF10662.4 143 1.7e-06 19.9 1.2 1 3 8e-05 0.0052 8.6 0.0 3 31 32 60 30 100 0.90 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 PduV-EutP PF10662.4 143 1.7e-06 19.9 1.2 2 3 0.00051 0.033 6.0 0.1 3 23 324 344 322 352 0.89 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 PduV-EutP PF10662.4 143 1.7e-06 19.9 1.2 3 3 0.0082 0.53 2.1 0.0 40 72 431 463 420 484 0.69 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 KAP_NTPase PF07693.9 325 0.00014 13.2 1.8 1 2 0.00056 0.036 5.3 0.0 23 47 33 57 26 143 0.77 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 KAP_NTPase PF07693.9 325 0.00014 13.2 1.8 2 2 0.00018 0.012 6.9 0.0 23 42 325 344 319 398 0.87 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_2 - 181 HTH_17 PF12728.2 51 1.1e-06 21.2 0.0 1 1 6.2e-08 2e-06 20.3 0.0 2 27 4 29 4 37 0.92 # 961 # 1503 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.378 4_3 - 199 HTH_17 PF12728.2 51 1.3e-05 17.8 0.0 1 1 8.5e-07 2.8e-05 16.7 0.0 2 27 166 191 165 196 0.90 # 533 # 1129 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 1_23 - 140 RuvA_C PF07499.8 47 0.0011 11.5 0.8 1 2 0.01 0.67 2.6 0.3 39 46 6 13 5 14 0.92 # 19821 # 20240 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.429 1_23 - 140 RuvA_C PF07499.8 47 0.0011 11.5 0.8 2 2 0.00038 0.025 7.2 0.0 11 25 21 35 21 36 0.92 # 19821 # 20240 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.429 2_10 - 514 Zn-ribbon_8 PF09723.5 42 0.00018 13.8 7.4 1 2 0.00023 0.015 7.6 5.0 7 35 76 102 75 106 0.81 # 8753 # 10294 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.555 2_10 - 514 Zn-ribbon_8 PF09723.5 42 0.00018 13.8 7.4 2 2 0.00078 0.051 5.9 0.0 8 24 450 466 437 470 0.75 # 8753 # 10294 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.555 4_3 - 199 HTH_11 PF08279.7 55 7.6e-07 21.1 0.0 1 1 1.1e-07 3.6e-06 18.9 0.0 7 35 158 185 152 187 0.85 # 533 # 1129 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 2_2 - 181 HTH_11 PF08279.7 55 0.00015 13.7 0.0 1 1 1.2e-05 0.0004 12.4 0.0 15 37 3 25 1 26 0.91 # 961 # 1503 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.378 2_9 - 279 DDE_Tnp_1_5 PF13737.1 112 1.4e-40 130.3 0.0 1 2 1.3e-41 8.4e-40 127.8 0.0 10 112 1 103 1 103 0.95 # 7680 # 8516 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.581 2_9 - 279 DDE_Tnp_1_5 PF13737.1 112 1.4e-40 130.3 0.0 2 2 0.078 5.1 -0.3 0.0 92 109 116 133 107 136 0.76 # 7680 # 8516 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.581 1_20 - 1079 PIF1 PF05970.9 364 1.3e-06 19.8 0.1 1 2 1.3e-07 8.7e-06 17.1 0.0 2 65 478 537 477 588 0.85 # 14125 # 17361 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 1_20 - 1079 PIF1 PF05970.9 364 1.3e-06 19.8 0.1 2 2 0.089 5.8 -2.1 0.0 334 363 795 823 783 824 0.84 # 14125 # 17361 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 4_3 - 199 TrmB PF01978.14 68 5.2e-06 18.5 0.0 1 1 1.9e-07 1.2e-05 17.3 0.0 6 42 149 185 146 188 0.94 # 533 # 1129 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 1_20 - 1079 Helicase_RecD PF05127.9 177 1.3e-05 17.2 4.8 1 2 0.00059 0.038 5.9 0.1 122 146 498 522 481 539 0.76 # 14125 # 17361 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 1_20 - 1079 Helicase_RecD PF05127.9 177 1.3e-05 17.2 4.8 2 2 8.1e-06 0.00052 12.0 0.1 75 114 548 585 529 653 0.69 # 14125 # 17361 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 2_2 - 181 UPF0122 PF04297.9 101 1.9e-07 23.4 1.3 1 3 2e-08 1.3e-06 20.7 0.0 33 89 3 64 1 76 0.78 # 961 # 1503 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.378 2_2 - 181 UPF0122 PF04297.9 101 1.9e-07 23.4 1.3 2 3 0.088 5.7 -0.6 0.4 55 79 74 99 62 121 0.55 # 961 # 1503 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.378 2_2 - 181 UPF0122 PF04297.9 101 1.9e-07 23.4 1.3 3 3 0.03 1.9 0.9 0.3 44 83 94 134 83 156 0.66 # 961 # 1503 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.378 1_10 - 867 AAA_10 PF12846.2 304 1.7e-35 115.2 0.1 1 1 3.2e-36 5.2e-35 113.6 0.0 2 292 492 772 491 780 0.84 # 4161 # 6761 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.497 1_21 - 510 AAA_10 PF12846.2 304 3.5e-07 22.2 0.1 1 2 2.8e-05 0.00045 12.0 0.1 3 41 128 166 126 177 0.92 # 17361 # 18890 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 1_21 - 510 AAA_10 PF12846.2 304 3.5e-07 22.2 0.1 2 2 0.00045 0.0073 8.0 0.0 214 286 339 414 307 431 0.75 # 17361 # 18890 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 2_5 - 492 AAA_10 PF12846.2 304 2.8e-05 15.9 4.7 1 2 0.0027 0.044 5.4 0.0 6 22 35 51 33 67 0.80 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 AAA_10 PF12846.2 304 2.8e-05 15.9 4.7 2 2 6.8e-05 0.0011 10.7 0.5 4 118 325 478 322 489 0.76 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_17 - 332 AAA_10 PF12846.2 304 0.00017 13.3 0.0 1 1 1.6e-05 0.00027 12.7 0.0 3 29 160 185 158 233 0.81 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_5 - 492 Dynamin_N PF00350.18 168 0.0069 8.5 17.3 1 2 0.0077 0.5 2.4 11.6 1 86 33 234 33 305 0.68 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_5 - 492 Dynamin_N PF00350.18 168 0.0069 8.5 17.3 2 2 0.00049 0.032 6.3 0.3 1 111 325 437 325 487 0.51 # 2801 # 4276 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_11 - 280 Pterin_bind PF00809.17 210 1.7e-58 189.7 0.0 1 1 3e-60 2e-58 189.5 0.0 1 210 7 216 7 216 0.98 # 10699 # 11538 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.617 1_17 - 332 IstB_IS21 PF01695.12 178 1.8e-05 16.5 0.0 1 1 4.5e-07 2.9e-05 15.8 0.0 44 73 155 184 127 201 0.82 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_34 - 422 DNA_pol_lambd_f PF10391.4 52 1.5e-06 20.1 0.1 1 2 3e-07 1.9e-05 16.5 0.0 6 35 182 211 180 216 0.84 # 25388 # 26653 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.535 1_34 - 422 DNA_pol_lambd_f PF10391.4 52 1.5e-06 20.1 0.1 2 2 0.048 3.1 -0.2 0.0 6 20 265 279 256 283 0.80 # 25388 # 26653 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.535 2_2 - 181 Phage_AlpA PF05930.7 51 0.00026 13.0 0.0 1 1 7.6e-06 0.0005 12.1 0.0 4 28 4 28 1 30 0.90 # 961 # 1503 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.378 1_17 - 332 GTP_EFTU PF00009.22 188 0.00014 13.6 0.2 1 1 3.5e-06 0.00023 12.9 0.2 2 32 157 187 156 205 0.83 # 11797 # 12792 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/452798c5-89de-4558-9672-527e40bfac5d # Target file: checkm_output/bins/pm1939/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1939/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/452798c5-89de-4558-9672-527e40bfac5d checkm_output/bins/pm1939/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:55:56 2017 # [ok]